Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_11g0024270 OGI:11081630 | 8/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr11:30901270-30906261
Gene Symbol -
DNA seq

atggagtcggcggcggcgagcgctctcttgaagagcgtgatggggaggctgttcatggcgctggagaaggagtacagcaagcacagaggcctcgcgcaagaaacccactctctgcagcaggacctccgcatgatcgccgccgccatggacgaccagctccgtgtcctggggaggaacgacgcccggaacgccgtcgcgcggctccacaccgaggagatgcttgatctttcgcgcgacattgaggactgcgtcgaccgcttcttgcaccgcctcacctgcaataaccacaagcgcggcagcggcagcaatggcgccggacccggagcgtcgtccatggtgcgccggatggctcacgagctcagcaaggtccagagccggtcaagcttcgccgacgagatccagaagctcaagaggcgcatcagggaggcgcaccagctggatttttcacaTtttTGGTCCTTTTAAAAAACTTATTTCGCAAATAGAACCCTGAAAAAACTTATCCCAGAAATGGTCCTTTTTGTGGCGCCAGAGTGGCTGGCGCCGTCATCCAATGGGACGGCGCCAGCCTCTCTGGCGCCGTCCTCCTGCCACCGTGGCGCACGCGAACTGACGTGGCAGGAGGAGGGCGCCAGCCATGCTGGCGGCGCCCTAGGGAGGAGGGCGCCAGCATGGCTGGCGCCGCCGGCTCCATTCCTGTTTCTCTGTATGGAGTTGCAACGGTGTCATTTTTATTTTATTTTTTCGGATGTTTTTTCACACTCAGGATCACGATACAACCAACCACAAaaaaaaatttaaactcgaactaccacttagctaagtctgaaaatatctagcataccacttagtctactttgcaccttcactaaaattagaccataactcttttagtaaaaccctttgatcagcatgttaaacataatgcactctaccactatatgaaattacttaatctaattcaaaatataaccacatgaaatgacatatatagttaaacagtacatagagatgcaattttttatttttatttcatttttttgatatttttttcacacttaggagaacataggaatcaaccgtataaaaaataaactcaaacagacaaaatatgtgacatgtagaaTtttccaaaactctaccgaaatggacaaaatatgtcatctattaaaataggcataactttctcatacggactcggaatcaggcaaataatatatgcacggacatctacagaaaaagttacatccgattctccccagctttgccgggttcgacgatattaaaacctccaaatttcgcttgcaagattgtgTtttcgaggagagaagtttttcggtggagctttggaaaattccatatgccacatatttcgtccgtttgagtttattttttacatggttggttcctgtgagttcctaagtgtgaaaaaaatatcaaaaaaataaaatAaaaataaaaaagttgcacatctctctCctctgcactagttcggagagaggagaggagaggaaaaattctacatgtcacatattactttcatttgagttcaatttttctatggttggttcttgtgtgtccctaagcgtgaaaaaaaatatcaaacaaataaaataaaaataaaaaatttcgaggggggggcgccagccactctggcgcactccccctagccacctcagcatcgccccgccacgtcagcagggggacggcgccaaagaggctggcgccgtcctgttgaacaacggcgccagccactctggcgccccaaaaaggaccatttttaggataagtttttctaggggtctacttgcgaaataagtttttcaaaaggaccaaaatgtgaaaaatccagggcgcaccagcgtgtcatggacatcaaatctattgtggatgtcatcgccggcggccaacccaccacaggtgccatgagttcgtcggcaacagcgccatgccggaatacatgcaacccagtgggcataggagagcccgtggaggagctcctctcgctgctggacgaggtggagggcgagccagaacagatgagggtcatctctgtcgttgggtttggcggattggggaagaccactcttgccagggcggtctatgatagccctggcgcaaagggcaaattctcccaccgtgcatgggtcaccatcggtacctctctggagagagacagtgggatcctgcatgctctactccagcaagttcttcccaaagacgccattggtgttgatgggcaacatgaccttgaagccttgctcaaagaatacctcaaggacaagaggttagttcacATatatatatgtttaactagctactctaatgatccaacatgattctgcactgatgactatttcatctgcataactgaactttcgatcgacttttgTttttgctcatttatcaatttcattggttcaccgtttaagaacccaaaataattcaggggaatggaacttcaaccagaaagaaaaaatgcaaaccacttttgctaaattcaaacaaatttgattttcattttatcagaggaacatcctcctggcactcactgtttatagttctgactattgcattagcagaatttatgttttactactcaattttcctactattttcccaatttggctattaggtatttaattgttatggatgacatcaatatggaacaatggagcatcataagatcaacatttgtagacaacggtacaagcagcaggataatactgaccacaaccattcagtcagtagcaaatatgtgcagccatggcaatggttatgtgtataaaatgaacacacttggtgaagaagactctaaaacactagcatttccagggtttagatcacctgaattggagcaaggttcagaatcattattagggaaatgcgatggccttcctcttgctctggtcagtgtttctgattatctgaagagctcaagtgagcccacagGAgagctatgtgctaagctgtgccgcaaccttggatctcatctgaaagaacgggatggccattacagcttttcagaactcaggaaggtgctccttgacagctatgacagtttttctggctatgctctgagctgcttgctgtatcttggtaTattccccaacaatcgtcctctcaagaagaaagttgtaatcagacggtggttagccgaaggatatgcacgaagtgactctcttcgtagagaagaggatattgcagatgagaatttcagtaagcttattgaccagaatatcgttcagcctgttgacacaagaaacaattctgaagtaaaaacgtgcaaaactcatggaattatgcatgaatttttgctgaacaagtccttgtcacagatattcatcgcgaaatcatctcgtgatcatccaaggctaggtatcaatactaatgcacgccacctttctgttcatgctggtgaactgacagagagcgtggaatctgatgaagaattatctcgtgtacgatctctgacaatctttGgggatgcaggacatgcaatttgctatgttcgtaaatgcaaattgatacgagtcttggatctacaagaatgcaatgatttggatgatgaacacctgaaatacatatgcaaactatggcatctgaaatacctgagctttgggagcaatatcagtgagcttccaaggaGcattgaaggacttcattgtttagagacactggatttaaggagaaccgagataaagtttttgcccattgaagcaatcatgctgccctacttagctcacctttttggaaagtttatgcttcatagagatgatgtgaatagtgtgaacaagatgactaaactacaaaaattcttctcttccaaaaagagcaatctgcaaactttagcaggatttatcactgacgaaagcaaaggttttctgcaacatattggtcatatgaaaaagctgaggaaggttaagatatggttcaaacatgttgcaggtagcagtaattacatagctgatctttcacaggccattcaggaattcaccaaggctcccattgatagggatattgaccgttctctctcacttgattccgaagaatgtcctgAaaattttctgagttcgcttgatttggagacatgctctgaaggttccaaatatgccctgaggtcactaaaattgaatggagaacttcaccggttgccaccatttgttactttgctgtcaggtctcacggagctttgcatttcgtcagctacgttaacacaaggtcatctatcagcactgatcaatctaaacagactgctctacctcAaactggttgcatataagctagtgaatttcgaaataaaacatggagcattcccgagcttgcgacgcctgtgctttgtggtgaaaagtgtcacctctgctctgccaacaatcgagcatggagctctcccaaatctcatctcacttcagctgctctgtcaaggtctagttggtctttctggcatcgagatcaaacacatgaaatatctcaaggaagtcacgattaactctggagtggctatacaatgggaacaggcagcaaagaaccacccgaataggcctaaaattttgatcctcagaaaggttaatccaatggaaagcgaggaaccagaaagaccttgtgccataagggagcagagaaaaatttctgtagctcaaacgacaagtttagatgatggactggactctagcctcaataagatgagactttcaaagccttcttcttcacggcttcaggttttcgttcatccggtggtgataacggccactgaggcagccccccagtcttccttggcaaatctctagcataaatatgccactgcagcaggtagacttcaataaagaccattcaatctttttgttgtgtaattttaaatttttgtcggtttgttgttcagttacattgaccagatttctctcttccgatacctgtTGtgtgatgtgcactacatgcagtacatgtctgttggaaggaagtgataaacagtatgctaatttacctcagaacaca

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CDS seq

atggagtcggcggcggcgagcgctctcttgaagagcgtgatggggaggctgttcatggcgctggagaaggagtacagcaagcacagaggcctcgcgcaagaaacccactctctgcagcaggacctccgcatgatcgccgccgccatggacgaccagctccgtgtcctggggaggaacgacgcccggaacgccgtcgcgcggctccacaccgaggagatgcttgatctttcgcgcgacattgaggactgcgtcgaccgcttcttgcaccgcctcacctgcaataaccacaagcgcggcagcggcagcaatggcgccggacccggagcgtcgtccatggtgcgccggatggctcacgagctcagcaaggtccagagccgttcgtcggcaacagcgccatgccggaatacatgcaacccagtgggcataggagagcccgtggaggagctcctctcgctgctggacgaggtggagggcgagccagaacagatgagggtcatctctgtcgttgggtttggcggattggggaagaccactcttgccagggcggtctatgatagccctggcgcaaagggcaaattctcccaccgtgcatgggtcaccatcggtacctctctggagagagacagtgggatcctgcatgctctactccagcaagttcttcccaaagacgccattggtgttgatgggcaacatgaccttgaagccttgctcaaagaatacctcaaggacaagaggtatttaattgttatggatgacatcaatatggaacaatggagcatcataagatcaacatttgtagacaacggtacaagcagcaggataatactgaccacaaccattcagtcagtagcaaatatgtgcagccatggcaatggttatgtgtataaaatgaacacacttggtgaagaagactctaaaacactagcatttccagggtttagatcacctgaattggagcaaggttcagaatcattattagggaaatgcgatggccttcctcttgctctggtcagtgtttctgattatctgaagagctcaagtgagcccacagGAgagctatgtgctaagctgtgccgcaaccttggatctcatctgaaagaacgggatggccattacagcttttcagaactcaggaaggtgctccttgacagctatgacagtttttctggctatgctctgagctgcttgctgtatcttggtaTattccccaacaatcgtcctctcaagaagaaagttgtaatcagacggtggttagccgaaggatatgcacgaagtgactctcttcgtagagaagaggatattgcagatgagaatttcagtaagcttattgaccagaatatcgttcagcctgttgacacaagaaacaattctgaagtaaaaacgtgcaaaactcatggaattatgcatgaatttttgctgaacaagtccttgtcacagatattcatcgcgaaatcatctcgtgatcatccaaggctaggtatcaatactaatgcacgccacctttctgttcatgctggtgaactgacagagagcgtggaatctgatgaagaattatctcgtgtacgatctctgacaatctttGgggatgcaggacatgcaatttgctatgttcgtaaatgcaaattgatacgagtcttggatctacaagaatgcaatgatttggatgatgaacacctgaaatacatatgcaaactatggcatctgaaatacctgagctttgggagcaatatcagtgagcttccaaggaGcattgaaggacttcattgtttagagacactggatttaaggagaaccgagataaagtttttgcccattgaagcaatcatgctgccctacttagctcacctttttggaaagtttatgcttcatagagatgatgtgaatagtgtgaacaagatgactaaactacaaaaattcttctcttccaaaaagagcaatctgcaaactttagcaggatttatcactgacgaaagcaaaggttttctgcaacatattggtcatatgaaaaagctgaggaaggttaagatatggttcaaacatgttgcaggtagcagtaattacatagctgatctttcacaggccattcaggaattcaccaaggctcccattgatagggatattgaccgttctctctcacttgattccgaagaatgtcctgAaaattttctgagttcgcttgatttggagacatgctctgaaggttccaaatatgccctgaggtcactaaaattgaatggagaacttcaccggttgccaccatttgttactttgctgtcaggtctcacggagctttgcatttcgtcagctacgttaacacaaggtcatctatcagcactgatcaatctaaacagactgctctacctcAaactggttgcatataagctagtgaatttcgaaataaaacatggagcattcccgagcttgcgacgcctgtgctttgtggtgaaaagtgtcacctctgctctgccaacaatcgagcatggagctctcccaaatctcatctcacttcagctgctctgtcaaggtctagttggtctttctggcatcgagatcaaacacatgaaatatctcaaggaagtcacgattaactctggagtggctatacaatgggaacaggcagcaaagaaccacccgaataggcctaaaattttgatcctcagaaaggttaatccaatggaaagcgaggaaccagaaagaccttgtgccataagggagcagagaaaaatttctgtagctcaaacgacaagtttagatgatggactggactctagcctcaataagatgagactttcaaagccttcttcttcacggcttcaggttttcgttcatccggtggtgataacggccactgaggcagccccccagtcttccttggcaaatctctag

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Protein seq

MESAAASALLKSVMGRLFMALEKEYSKHRGLAQETHSLQQDLRMIAAAMDDQLRVLGRNDARNAVARLHTEEMLDLSRDIEDCVDRFLHRLTCNNHKRGSGSNGAGPGASSMVRRMAHELSKVQSRSSATAPCRNTCNPVGIGEPVEELLSLLDEVEGEPEQMRVISVVGFGGLGKTTLARAVYDSPGAKGKFSHRAWVTIGTSLERDSGILHALLQQVLPKDAIGVDGQHDLEALLKEYLKDKRYLIVMDDINMEQWSIIRSTFVDNGTSSRIILTTTIQSVANMCSHGNGYVYKMNTLGEEDSKTLAFPGFRSPELEQGSESLLGKCDGLPLALVSVSDYLKSSSEPTGELCAKLCRNLGSHLKERDGHYSFSELRKVLLDSYDSFSGYALSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDSLRREEDIADENFSKLIDQNIVQPVDTRNNSEVKTCKTHGIMHEFLLNKSLSQIFIAKSSRDHPRLGINTNARHLSVHAGELTESVESDEELSRVRSLTIFGDAGHAICYVRKCKLIRVLDLQECNDLDDEHLKYICKLWHLKYLSFGSNISELPRSIEGLHCLETLDLRRTEIKFLPIEAIMLPYLAHLFGKFMLHRDDVNSVNKMTKLQKFFSSKKSNLQTLAGFITDESKGFLQHIGHMKKLRKVKIWFKHVAGSSNYIADLSQAIQEFTKAPIDRDIDRSLSLDSEECPENFLSSLDLETCSEGSKYALRSLKLNGELHRLPPFVTLLSGLTELCISSATLTQGHLSALINLNRLLYLKLVAYKLVNFEIKHGAFPSLRRLCFVVKSVTSALPTIEHGALPNLISLQLLCQGLVGLSGIEIKHMKYLKEVTINSGVAIQWEQAAKNHPNRPKILILRKVNPMESEEPERPCAIREQRKISVAQTTSLDDGLDSSLNKMRLSKPSSSRLQVFVHPVVITATEAAPQSSLANL

Function Disease resistance protein RGA4 [UniProtKB/Swiss-Prot:F7J0M4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_11g0024270 OsPr106_11g0024270.01 Chr11 30901270 30906261 + NAM
CDS seq

atggagtcggcggcggcgagcgctctcttgaagagcgtgatggggaggctgttcatggcgctggagaaggagtacagcaagcacagaggcctcgcgcaagaaacccactctctgcagcaggacctccgcatgatcgccgccgccatggacgaccagctccgtgtcctggggaggaacgacgcccggaacgccgtcgcgcggctccacaccgaggagatgcttgatctttcgcgcgacattgaggactgcgtcgaccgcttcttgcaccgcctcacctgcaataaccacaagcgcggcagcggcagcaatggcgccggacccggagcgtcgtccatggtgcgccggatggctcacgagctcagcaaggtccagagccgttcgtcggcaacagcgccatgccggaatacatgcaacccagtgggcataggagagcccgtggaggagctcctctcgctgctggacgaggtggagggcgagccagaacagatgagggtcatctctgtcgttgggtttggcggattggggaagaccactcttgccagggcggtctatgatagccctggcgcaaagggcaaattctcccaccgtgcatgggtcaccatcggtacctctctggagagagacagtgggatcctgcatgctctactccagcaagttcttcccaaagacgccattggtgttgatgggcaacatgaccttgaagccttgctcaaagaatacctcaaggacaagaggtatttaattgttatggatgacatcaatatggaacaatggagcatcataagatcaacatttgtagacaacggtacaagcagcaggataatactgaccacaaccattcagtcagtagcaaatatgtgcagccatggcaatggttatgtgtataaaatgaacacacttggtgaagaagactctaaaacactagcatttccagggtttagatcacctgaattggagcaaggttcagaatcattattagggaaatgcgatggccttcctcttgctctggtcagtgtttctgattatctgaagagctcaagtgagcccacagGAgagctatgtgctaagctgtgccgcaaccttggatctcatctgaaagaacgggatggccattacagcttttcagaactcaggaaggtgctccttgacagctatgacagtttttctggctatgctctgagctgcttgctgtatcttggtaTattccccaacaatcgtcctctcaagaagaaagttgtaatcagacggtggttagccgaaggatatgcacgaagtgactctcttcgtagagaagaggatattgcagatgagaatttcagtaagcttattgaccagaatatcgttcagcctgttgacacaagaaacaattctgaagtaaaaacgtgcaaaactcatggaattatgcatgaatttttgctgaacaagtccttgtcacagatattcatcgcgaaatcatctcgtgatcatccaaggctaggtatcaatactaatgcacgccacctttctgttcatgctggtgaactgacagagagcgtggaatctgatgaagaattatctcgtgtacgatctctgacaatctttGgggatgcaggacatgcaatttgctatgttcgtaaatgcaaattgatacgagtcttggatctacaagaatgcaatgatttggatgatgaacacctgaaatacatatgcaaactatggcatctgaaatacctgagctttgggagcaatatcagtgagcttccaaggaGcattgaaggacttcattgtttagagacactggatttaaggagaaccgagataaagtttttgcccattgaagcaatcatgctgccctacttagctcacctttttggaaagtttatgcttcatagagatgatgtgaatagtgtgaacaagatgactaaactacaaaaattcttctcttccaaaaagagcaatctgcaaactttagcaggatttatcactgacgaaagcaaaggttttctgcaacatattggtcatatgaaaaagctgaggaaggttaagatatggttcaaacatgttgcaggtagcagtaattacatagctgatctttcacaggccattcaggaattcaccaaggctcccattgatagggatattgaccgttctctctcacttgattccgaagaatgtcctgAaaattttctgagttcgcttgatttggagacatgctctgaaggttccaaatatgccctgaggtcactaaaattgaatggagaacttcaccggttgccaccatttgttactttgctgtcaggtctcacggagctttgcatttcgtcagctacgttaacacaaggtcatctatcagcactgatcaatctaaacagactgctctacctcAaactggttgcatataagctagtgaatttcgaaataaaacatggagcattcccgagcttgcgacgcctgtgctttgtggtgaaaagtgtcacctctgctctgccaacaatcgagcatggagctctcccaaatctcatctcacttcagctgctctgtcaaggtctagttggtctttctggcatcgagatcaaacacatgaaatatctcaaggaagtcacgattaactctggagtggctatacaatgggaacaggcagcaaagaaccacccgaataggcctaaaattttgatcctcagaaaggttaatccaatggaaagcgaggaaccagaaagaccttgtgccataagggagcagagaaaaatttctgtagctcaaacgacaagtttagatgatggactggactctagcctcaataagatgagactttcaaagccttcttcttcacggcttcaggttttcgttcatccggtggtgataacggccactgaggcagccccccagtcttccttggcaaatctctag

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Protein seq

MESAAASALLKSVMGRLFMALEKEYSKHRGLAQETHSLQQDLRMIAAAMDDQLRVLGRNDARNAVARLHTEEMLDLSRDIEDCVDRFLHRLTCNNHKRGSGSNGAGPGASSMVRRMAHELSKVQSRSSATAPCRNTCNPVGIGEPVEELLSLLDEVEGEPEQMRVISVVGFGGLGKTTLARAVYDSPGAKGKFSHRAWVTIGTSLERDSGILHALLQQVLPKDAIGVDGQHDLEALLKEYLKDKRYLIVMDDINMEQWSIIRSTFVDNGTSSRIILTTTIQSVANMCSHGNGYVYKMNTLGEEDSKTLAFPGFRSPELEQGSESLLGKCDGLPLALVSVSDYLKSSSEPTGELCAKLCRNLGSHLKERDGHYSFSELRKVLLDSYDSFSGYALSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDSLRREEDIADENFSKLIDQNIVQPVDTRNNSEVKTCKTHGIMHEFLLNKSLSQIFIAKSSRDHPRLGINTNARHLSVHAGELTESVESDEELSRVRSLTIFGDAGHAICYVRKCKLIRVLDLQECNDLDDEHLKYICKLWHLKYLSFGSNISELPRSIEGLHCLETLDLRRTEIKFLPIEAIMLPYLAHLFGKFMLHRDDVNSVNKMTKLQKFFSSKKSNLQTLAGFITDESKGFLQHIGHMKKLRKVKIWFKHVAGSSNYIADLSQAIQEFTKAPIDRDIDRSLSLDSEECPENFLSSLDLETCSEGSKYALRSLKLNGELHRLPPFVTLLSGLTELCISSATLTQGHLSALINLNRLLYLKLVAYKLVNFEIKHGAFPSLRRLCFVVKSVTSALPTIEHGALPNLISLQLLCQGLVGLSGIEIKHMKYLKEVTINSGVAIQWEQAAKNHPNRPKILILRKVNPMESEEPERPCAIREQRKISVAQTTSLDDGLDSSLNKMRLSKPSSSRLQVFVHPVVITATEAAPQSSLANL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 1.457232

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0686500 SBH 0.321495 0.197166 0.314310
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g45930 SBH 0.217355 0.132576 0.080888
Nipponbare | IRGSP 1.0 | RAP-db Os11g0686500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0024390 SBH 0.000000 6.231301 0.302483
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0024220 SBH 0.072297 1.596504 0.651798
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0023930 RBH 0.0 2.924146 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0023720 RBH 0.025616 0.012910 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0024170 RBH 0.413226 0.0 1.183689
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0438200 SBH 5.3839205 14.887633 4.746096
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0024530 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0438400 RBH 0.551058 2.3722125 2.0688775
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0024440 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0024360 SBH 0.380983 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0023750 SBH 2.453158 14.942351 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0023740 RBH 0.0 0.0 0.357565
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0024110 RBH 0.0 1.827518 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G024120 RBH 0.0 0.0 0.441210
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0024350 RBH 0.000000 7.190678 1.220792
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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