Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0023290 | OGI:11078000 | 4/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:29968560-29976444 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcttcgtgatgatcttattaggtattggattgctgaaggttttgtggaagagcaagaaggacaacttctagaagatacagctgaagaatattactatgaattgatatctaggaatctccttcaaccagtgcatctatattttaacaatatcatctgcaacatccatgatcttctaaggcagcttgcctggcatttatcaggagatgaaattttttatggagatccacagtcattggacgctaatactttatcaaaagtacggtatgcttcaatttctacccatgattattctgtaattctttctgatgtagacaaggagtacattagagcaaggactttgcgtattcattgtggcaaatcaacactagttgaaaatacaattttcaagagatttccacgcattagaattttggatttgactggttctccaataaacaaaattccagattgccttggagatctgatccatctgtggttacttgatcttgatgaaactaagataaattgtcttccagaatccgttggttcactaaaatacctccaaatactgaacttgcagaggtgtgtgtctttgcacagccttcctttggcgattactaagttgagtaatttaaggcgtcttggtcttcgccatacaccaataactgaggttccacaagggataagcagattgaaattcctcaatgatttaggaggatttcctattggtgctggacgtgatagtactaaaatgcaagatggatggagcctggaagagttgcgtcctctttcacagttgaggtgcctcaatatgatcaaattggaaagagcaattccttgcggcggtacagattcattgctaaaatacaaggagcatctcagagttttgtatctttgctgcactggacagatagatcaagaatactcagaagaagatgctagcaacaatgagaagatctttgaacagctaactcctccaagcaacctagaagatctatcaatagtgagattctttggtcggagctatcccaattggctttgtgctaccatgttatcttcactgaaacacctggaactcttaggatgcaaatcctgcatgcatcttccacctattgggcaactaccctacttaaagtatctgaaaattttgggagcaacagttgtcaagataggacctgaatttgttggatttacggtggataatccaggatccatagagtcaactgctttccccaagcttgaatgtttggtcattagtgatatgcccaactgggaggaatggtcttttgctgaaaaggctgcttcaacacttgaggaagggcacgatgatggagatgacgcgaggcaaaaagggaaaactgcgccttcaaagttgcatcttctaccttgtctggagaagctgtacctttatggctgccccaagctaagggctctcccacgacaacttggacaggtggcctctagcttgaaggagctccatgtaagaggtgcaaattgcttgaagacgatcgtggacttccctttcctctctgatttcttttcaattagtggatgtgaaagcctggagaggatctcattccttccccaagtgagaaagttgtacgtaggcgcttgcccaaatttgaggtgtgttgaggaattggacaatttggagcagctgggcctgcccaaagatatgcaggacatgtctttgcggtgggtacatgggcttaaagagcaatgctatcagctccatagcgaagacctggatgtctacacctggcttggggaccaagagatacccatttatatgaaattaaattgacacaaaaaccagagtccaactttaattttgatgattattttaaggtgtgccaagtttacctgaactattcactgtgaattgatttaagggttaatacaagtcttacttcatgtgtggtaatgcgactggtaacaacaacaattatcttatgtatggtgctgcttgcttcccctgtgagtgagtataatataaggttgtaaggcagagaactttatgtaatcatgtgaactgtagttatcttacatatttacactactgtatctgttggcaaacatagatatatgcatgttaattattttgcattccagcaacaaaccaaagcacatggcgagcacctgtcagtctctcctcacaggccttggcccatttacacatccttgtcctaaactcctaggctgtgtttggaaaatgggtttgggatataatttcccaccccttgaagggtaagcttcaatcttagccatccattcatctcaccccatttcatcctatccctccattcatttccatttcccaatcccacctctcctaacccattttccaaacaccccgcggggtttggaaaatagccaaaaaggctaggagattttaatacaaatacactccgcggggtttaaaaaaaaaaagacagatggagtcaccagtatttttccctctcaactggctaggagaattcattaactagggtgtgttaggagactccatctgtcgatcctgcaatctagtagtttacatgtttatgcaagttttgtgcccgtgcagtgtccacggatgttcattttggatgcttaagagtttgctcccccaatttttgaccctctcatgaactctcaaattagaatatagttttctgttcatttctggttctattcagttatttagttcagatgccaactgtgattaacagaatgtgtagttgccgatggagttgtaatttggggtatctacgtgatcattgcagtggtgggaggctgagttttgtcgaaagttaaaattcctactcccagtttcagatactaatcagtatttcaccttatggcatttgatcgtaatgttcagaaatgttatcttttgatgctttagagtccactccgccaattttcgaccctctcatggactctgaaattaaaatcgggttttgtgttcattcctgtactgttcatttctactgtcatctcaactattttgagttcaagaatgaaaagtccatgtagcaagcacaattcattcttcccctaaattctcaagcaaagcaaatctgaatcgcatccacaaatacgggtaaaagggagggaggtgtcgcctacctcggttgagcccgtagacgagggagaggccacgccgtcgacggagctccgcctctcaccggcgttcccgctccctgcggccgcaacccgccctccagctccgcctccggtctccggcgccatcgccgaggcggtggctcgctcaacggccgcgcgcgccaggggctcgaggattacctcaatggctcgtcgaagctctcattggcagcaacgccctgttcccttatccccatcgccggcggcggcgccggcggctcgccatcccttcctcccttgtaatacgacaatacgagataatatgagggcctaaacgaaaatcaaccccacggattccgaggtgcgattaatctcagccgcctgtatatgatcgaacggtgcagagaggctgtggttttggatcgctggaacgaagagattttggtcgatagcagttgggttcgtgttcctttgttgttctgtagcgttgagtgatgcagagattgctgtactgccgtttgagcttcagaacctattgatgttatacagtacagatacgagtacatgaaactaggattgttgcgttgaattcaactcttggttcagagcatcgtcttctttggagtgaatcaattgctgttttttttttttgaacgactcgcacaagacggtgcgaagttctattgatagagcaggaaaaaattacaagattacaaccctgaaggatcgtaaccaggaaaaaggaaaaaactataccaccacccacacgccgacatagccaacacacaagcccaggagaaggctaacaccggaccggccaccgctaagcgtgaccgaccgccactagaccaacaaatgggcacagacgagatcgccccctaggggatgccaaaaacgacgtcttcaagaagagaagcgatagaaaaccgccgccgccgtccgtcaggacttaaaggagccaagactgggcttttgcccggcaaccaccttgaggggtgagacagcacaacaacgccctcaggcatcgttgtcagtccaaccaaggctggactgggttttcacctgcggctcaccacctacgaatccacggctgacacaccgatgctccaccaccgcacaagctttgtcgacatgtgggacccctgcactggcgtcccccgccagccagccttcgtgcgccgaagaccgtgccacacccaccggcagctcctcctcacacctaggtcgcctcctccaccgccggccgcgcctctctgctccaagccaacctcctccaccggacgcgcctctcgtgccaatccagcctccctccatcggccgcgcctctcgcgccacgccggcctccatctccgccgcccgcgcctctcatgccgagccggcctccgctgccatcggctgcgcttctctgcgccaagccggtctccgacccctccaccaaacgatgccgcgccggccagatgcagccgtctcccatgccctcagctagccgtccgaggccgccatgcctccggtgactgcataaacggtcaccaccaccgcagccgctgctgccgaaacgcccagccacctcgccgtcgccatcctcgcctcgcacccgactccttccccgccgtcgacgtcgccaccgcctccacagtaacgaccgccatcaccgctgccattgcctccgcaaaccgccgctgcgccgtcgccctccaccagcaagcagctaggagccgccccgatgccagcaggcatcgcagctgctgcctctgccgtcatcggcagtcaccatcgccagccaccgccaccgccagctgctgccgccgccgccgtcgcaagtcgccatcgtcagccatcgccgtcgcccgctgctgccgccgccacagccgcaccgagttggtgcggatctggggtttatgctgccgtcgccgccaagccccgcgccgctcgccgcgtcgcacggccacccgccgtcaccgaccgtcccgacgatggcatcggacgctgtcaccggcctcccgccacggttgtcgtcgccgcaccggctcgagcgtgccagcccccacctctccttggcaggccgcggcgtcgtcgcttccggccgggagggcggcggatcccgccgtcccccacgactcccgccggtgggaggaccagatccggccacgggagggccggatccgtgctcggcagcgccggaactcgacgtcgtcgccgtcgcctcactcccgtcgccgtcgcctcactcccgtcgtccggtctcgtcgacaccccagccgccttgaccacgagcgagggagatgggaagccctgccgccgccttccttgcctccgcccggctttgccggcggctgctctggcggcggcgaggctggggagagcaggggaagggagggggcggcgcagcttgaatcgccgccggcgtcgcccctggggcggagcgaccgggggcccccgttcgaggttagttgagaataatccagtagcaaaatattgtttacggctcgcgattgaatcaattgctgttgaaatcaccagttggatgagcagacaaaattatgttcagtacttctgtcactgtaactgaacacatatagactacagagtgagccatatggtttcagatcagatatgttccttctttgatatggtcatcattctttggtcgctgaatcacaggaggtcgctgacagctactgcgtgtaccataatgtggtgcgccacacggctggggagttcacccaggcgccggccgacgtcaggattatcccagccaaaccaactactttgttcagacttcagaattccatacccaaatctgaaagctactaaaatggttttgttgctgcagggcacagcgagggggcgaggaaggcatgacgctcttattcatgtgctgcaaccccagctgtggtcaaagtctcaaagatggagggtcacatgtaaaggcagagtagctactgtttcctaaatgtaaaagtcagtagagcttgcattatgccatgaattggcatatgtttacttgtcaagtcgaaggataagacaacaaacaagagtatgagatgccattgagcccatgacggaggaagcaaaactcaagcatgtgtgctccatgtttctgtttttcctaatcaaagcacgcacctggtttcacatcatggaatcttgaagtaaactgtaaactaatcacatcgaagcaaaccgtaaactaatcacaccaccaggcaacagctaatcgtagcaatatactattgcatctgttgatcagtgccccagaatagttgagtgtagctaatagtagtacgaaaagcaaaacacaaaaatattcctactaagtactattctgtaaggtctattagtaggaatcgagaactctatcaggagccacagcatttgcgttgtaacaaacctgatgtttgacaaagaccattgcgtttccatggtgttactagaataaaacatattattattgcttcagcgcttgtgtgcaggaaatcaattaccgttagtgattggagatatggataagaaaatgagtagccatagctagctagactgttcatgaatatacacaaaatgttgggctgtggagcacatacaagtggacaataacttgaagttgggtcacagcttccttcaaaaaaaagaaaaaaagttgggtcacagcgatagtaccatgggaaagataaaagaaaagaagagtggttcagcagttgtctagctagtctgaatgttcatctatgccatatatgcaaggccttaccacctctcctaaactgccccttcactcttgctttatttcactgtctggcattcttacactgcatttctaccagctgtgggtaataagctcaagatatatagctgaatttacttcctttgtttccttaagttaatctataaatgctcagttgactgcaggcacggagtttcatcaggatcagttgcgtccatttctacgtgcgttcttatcgattgggacgaaatccattggaagggaaagtctgcttcatctgaataaacacatatatactgatctctccttgcagcacacgctctctcttcgttggatatcaacacatttacctgtatttctggtatatcccattgatccttctcgttaaccttctgaatcattcaagttctacatctgtataatgagcatacacttcacctcttattttgatctctctcctttttgcagttgtagcagcacaatcagaggttctctcttgatgattggctcataatcttctgaaatccattctacactggcgtatccactcagtttcttttgacttcactaatctgagtctgtcaagtatcccaagtagatgggtcagagcaaacttccagcttgtgcaagatgaatgctattgagccttgttacgtgcagacttatgtcttctcatgctgaattatcactccataaggtaagatttgcatgcagtatacttgagtaaaacccctcaacttgttgccggttacttctttctcctcgtttacctttaacccaagaaactcaccgaatttttttttcctttctgctgacctccccccctttcttctcctgtcacctttggtgactcctgtacagtgcttatctcactaaatacaaaaccagctccgctggcttaggtttcaagaaatgtaaccccattattccagttctttagcttcagtatgctaacttgctcaatacacatggtaaaacaacctattaaaaaacttaccgaaatgtaaccccattattccagtcctttactgagatgtgcccctctgttgcaaagatactctgaaactgattgaactttgtccattttcagatcgtgtaa
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| CDS seq | atgcttcgtgatgatcttattaggtattggattgctgaaggttttgtggaagagcaagaaggacaacttctagaagatacagctgaagaatattactatgaattgatatctaggaatctccttcaaccagtgcatctatattttaacaatatcatctgcaacatccatgatcttctaaggcagcttgcctggcatttatcaggagatgaaattttttatggagatccacagtcattggacgctaatactttatcaaaagtacggtatgcttcaatttctacccatgattattctgtaattctttctgatgtagacaaggagtacattagagcaaggactttgcgtattcattgtggcaaatcaacactagttgaaaatacaattttcaagagatttccacgcattagaattttggatttgactggttctccaataaacaaaattccagattgccttggagatctgatccatctgtggttacttgatcttgatgaaactaagataaattgtcttccagaatccgttggttcactaaaatacctccaaatactgaacttgcagaggtgtgtgtctttgcacagccttcctttggcgattactaagttgagtaatttaaggcgtcttggtcttcgccatacaccaataactgaggttccacaagggataagcagattgaaattcctcaatgatttaggaggatttcctattggtgctggacgtgatagtactaaaatgcaagatggatggagcctggaagagttgcgtcctctttcacagttgaggtgcctcaatatgatcaaattggaaagagcaattccttgcggcggtacagattcattgctaaaatacaaggagcatctcagagttttgtatctttgctgcactggacagatagatcaagaatactcagaagaagatgctagcaacaatgagaagatctttgaacagctaactcctccaagcaacctagaagatctatcaatagtgagattctttggtcggagctatcccaattggctttgtgctaccatgttatcttcactgaaacacctggaactcttaggatgcaaatcctgcatgcatcttccacctattgggcaactaccctacttaaagtatctgaaaattttgggagcaacagttgtcaagataggacctgaatttgttggatttacggtggataatccaggatccatagagtcaactgctttccccaagcttgaatgtttggtcattagtgatatgcccaactgggaggaatggtcttttgctgaaaaggctgcttcaacacttgaggaagggcacgatgatggagatgacgcgaggcaaaaagggaaaactgcgccttcaaagttgcatcttctaccttgtctggagaagctgtacctttatggctgccccaagctaagggctctcccacgacaacttggacaggtggcctctagcttgaaggagctccatgtaagaggtgcaaattgcttgaagacgatcgtggacttccctttcctctctgatttcttttcaattagtggatgtgaaagcctggagaggatctcattccttccccaagtgagaaagttgtacgtaggcgcttgcccaaatttgaggtgtgttgaggaattggacaatttggagcagctgggcctgcccaaagatatgcaggacatgtctttgcggtgggtacatgggcttaaagagcaatgctatcagctccatagcgaagacctggatatcgtgtaa
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| Protein seq | MLRDDLIRYWIAEGFVEEQEGQLLEDTAEEYYYELISRNLLQPVHLYFNNIICNIHDLLRQLAWHLSGDEIFYGDPQSLDANTLSKVRYASISTHDYSVILSDVDKEYIRARTLRIHCGKSTLVENTIFKRFPRIRILDLTGSPINKIPDCLGDLIHLWLLDLDETKINCLPESVGSLKYLQILNLQRCVSLHSLPLAITKLSNLRRLGLRHTPITEVPQGISRLKFLNDLGGFPIGAGRDSTKMQDGWSLEELRPLSQLRCLNMIKLERAIPCGGTDSLLKYKEHLRVLYLCCTGQIDQEYSEEDASNNEKIFEQLTPPSNLEDLSIVRFFGRSYPNWLCATMLSSLKHLELLGCKSCMHLPPIGQLPYLKYLKILGATVVKIGPEFVGFTVDNPGSIESTAFPKLECLVISDMPNWEEWSFAEKAASTLEEGHDDGDDARQKGKTAPSKLHLLPCLEKLYLYGCPKLRALPRQLGQVASSLKELHVRGANCLKTIVDFPFLSDFFSISGCESLERISFLPQVRKLYVGACPNLRCVEELDNLEQLGLPKDMQDMSLRWVHGLKEQCYQLHSEDLDIV |
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| Function | Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0023290 | OsPr106_11g0023290.01 | Chr11 | 29968560 | 29976444 | + | NAM | ||
| CDS seq | atgcttcgtgatgatcttattaggtattggattgctgaaggttttgtggaagagcaagaaggacaacttctagaagatacagctgaagaatattactatgaattgatatctaggaatctccttcaaccagtgcatctatattttaacaatatcatctgcaacatccatgatcttctaaggcagcttgcctggcatttatcaggagatgaaattttttatggagatccacagtcattggacgctaatactttatcaaaagtacggtatgcttcaatttctacccatgattattctgtaattctttctgatgtagacaaggagtacattagagcaaggactttgcgtattcattgtggcaaatcaacactagttgaaaatacaattttcaagagatttccacgcattagaattttggatttgactggttctccaataaacaaaattccagattgccttggagatctgatccatctgtggttacttgatcttgatgaaactaagataaattgtcttccagaatccgttggttcactaaaatacctccaaatactgaacttgcagaggtgtgtgtctttgcacagccttcctttggcgattactaagttgagtaatttaaggcgtcttggtcttcgccatacaccaataactgaggttccacaagggataagcagattgaaattcctcaatgatttaggaggatttcctattggtgctggacgtgatagtactaaaatgcaagatggatggagcctggaagagttgcgtcctctttcacagttgaggtgcctcaatatgatcaaattggaaagagcaattccttgcggcggtacagattcattgctaaaatacaaggagcatctcagagttttgtatctttgctgcactggacagatagatcaagaatactcagaagaagatgctagcaacaatgagaagatctttgaacagctaactcctccaagcaacctagaagatctatcaatagtgagattctttggtcggagctatcccaattggctttgtgctaccatgttatcttcactgaaacacctggaactcttaggatgcaaatcctgcatgcatcttccacctattgggcaactaccctacttaaagtatctgaaaattttgggagcaacagttgtcaagataggacctgaatttgttggatttacggtggataatccaggatccatagagtcaactgctttccccaagcttgaatgtttggtcattagtgatatgcccaactgggaggaatggtcttttgctgaaaaggctgcttcaacacttgaggaagggcacgatgatggagatgacgcgaggcaaaaagggaaaactgcgccttcaaagttgcatcttctaccttgtctggagaagctgtacctttatggctgccccaagctaagggctctcccacgacaacttggacaggtggcctctagcttgaaggagctccatgtaagaggtgcaaattgcttgaagacgatcgtggacttccctttcctctctgatttcttttcaattagtggatgtgaaagcctggagaggatctcattccttccccaagtgagaaagttgtacgtaggcgcttgcccaaatttgaggtgtgttgaggaattggacaatttggagcagctgggcctgcccaaagatatgcaggacatgtctttgcggtgggtacatgggcttaaagagcaatgctatcagctccatagcgaagacctggatatcgtgtaa
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| Protein seq | MLRDDLIRYWIAEGFVEEQEGQLLEDTAEEYYYELISRNLLQPVHLYFNNIICNIHDLLRQLAWHLSGDEIFYGDPQSLDANTLSKVRYASISTHDYSVILSDVDKEYIRARTLRIHCGKSTLVENTIFKRFPRIRILDLTGSPINKIPDCLGDLIHLWLLDLDETKINCLPESVGSLKYLQILNLQRCVSLHSLPLAITKLSNLRRLGLRHTPITEVPQGISRLKFLNDLGGFPIGAGRDSTKMQDGWSLEELRPLSQLRCLNMIKLERAIPCGGTDSLLKYKEHLRVLYLCCTGQIDQEYSEEDASNNEKIFEQLTPPSNLEDLSIVRFFGRSYPNWLCATMLSSLKHLELLGCKSCMHLPPIGQLPYLKYLKILGATVVKIGPEFVGFTVDNPGSIESTAFPKLECLVISDMPNWEEWSFAEKAASTLEEGHDDGDDARQKGKTAPSKLHLLPCLEKLYLYGCPKLRALPRQLGQVASSLKELHVRGANCLKTIVDFPFLSDFFSISGCESLERISFLPQVRKLYVGACPNLRCVEELDNLEQLGLPKDMQDMSLRWVHGLKEQCYQLHSEDLDIV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0674400 | SBH | 3.157148 | 3.913529 | 6.933932 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0674400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023710 | RBH | 0.0 | 1.508121 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023090 | SBH | 0.067817 | 0.359010 | 0.315617 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022990 | SBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023710 | SBH | 0.000000 | 0.469667 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0416600 | SBH | 0.1248355 | 0.9264055 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023960 | SBH | 0.470954 | 0.700124 | 2.179529 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0431500 | SBH | 0.034717 | 0.3487665 | 0.031508 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023780 | RBH | 0.0 | 0.141676 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023820 | SBH | 0.957821 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023280 | SBH | 2.088418 | 9.239458 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022990 | SBH | 1.870009 | 0.0 | 3.727034 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023130 | SBH | 0.000000 | 0.687507 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023320 | SBH | 0.129080 | 0.795419 | 0.599774 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023800 | SBH | 0.0 | 5.158051 | 0.000000 |
