Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0007860 | OGI:11019820 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:6752748-6762487 | ||||||||
| Gene Symbol | rNBS17, YR5, - | ||||||||||
| DNA seq | ctactatcttgttacatttcatttccaccgcatatatctccaaacagagagattaatatattggcaacagtacatgcaaataaggtcttataaaaaaatggatgtgctcttacatacaatgaatatcaaagtaaatgaaactacacataatgtacagaggcaccgcgaacgcaaaaaagctaggaatgataggcaactcatcggaaatcgacacctgctgcaaacagagggggaaaaaaactacaaacggcaccagccagccgcatctaaagttctaaacacgaatctctggaacatgctgcatcttctgatgcattctgtttttgtgccattgagttttgaagtccctgtgcaggtacagaagccagagcttcttcagggtccgaagggactcaatgccctcagggactatatccagctttgagagtgacacaacgtacaaaccttcaatggatggaagtgccccatccatgatctttagctggttcacattgggcatgtgctttaagacaagtgtcttcaggtggggaaaagactgtgtagaaagaaccaaaatgtttgcactatgcatgttgttcagtctcaaataagtgaggttcggcaaatgcgaagcgagcatccctagtggatcttcaccaagatgacaccaacttagagctagatatttaagatttgtgccgttcccgtgaaatattgggcaatcaagtgtacccttagcccatcgccctctgatgattagtctgtggagttctgttgaccttggcctaagagcctcgaagcagagttcctcattttcgtcttttgcagaaagaagcaagctggaaagaaatggcatgcttgacaatgtagcgaaaatatttgcacaatcagcagaacttatgttgtcaatccacacacttcttagttgcatcaatttcttcagttgctcagccaggtctttgctagactccacagtttctagagtctgcagctcttgcaagttggaaagttctttaggggcatgcattccaacaaagtaccggaaatctgactgcctctcatcaacgtatctatcggctataaggtgtcttagcttcttgatcttaacaatacttcgtggtagcttctcaattttggtttgcttgatgtcaagcgtgtggaggttagataactttccaatagactccggaagtgatttgactttggtgcgtcgtaagccaatgtaatgtagattaaacatattcccaatagaagttggcacttcagtaatctctgagtcttgcagctcaagaactgtaaggtagctagatccacacaaaattgaggataacatctcaaggggcaatgaggttgtcgaaagtgagatcagggtccgaaggcgcatgaatttaactgttgatacagtatcatcactccatccacatgttgacaagcgacgaacttccttatccataagcaacattgtgccaagatcattggctgaaccaaacctctcctctttagcaatagaaagagccaatacacgcacaatgtcatgcatcttacaggagtttaccctgccaatctcatcattgtccacaacttccagcatattccggtggatcagttccataaggtttccctctgcgacatcctctagcgtgttcttttctttgcctagcacaaagccttctgcaacccacaacctcagaaggctctcccgtgtcattgtgtagtcttcagggaacaagctacagtacaagaagcaatttctgaggtctcctgataggtcatggtagctcaaatttagaattgctcggacatgatcattgtttgctagctcagtccgaagctgtttgtatattttattccaaacaaattctgctgctggtcttgaagacagaaggcttcctatcgttacaattgctagtggtaggccatgacacctatccactatagaattagcaaccttctctagctccttggggcatttgtggcccttgttatagaaagcccttctacagaagagttcaaatgcatcagcgccattcaaaggctggaggttgagacggcgcgttgaggtagcaagggctgcaacatcattctctcgagttgtgatgatgactcgagttgcttgaagattctggaatgcatcttgcatctgaaagtacacttttttgtcccagacatcatccagcacaatcaaacatttgctatcttcaatctttttcttaatttcttctttcaggtcatgtgcatccatattgttcaagctatcaagtgacagttcagtagacccaatctttctaaggagctttcttaatagagcttccacattgtaggtctgggagacaacaatccatgcatgagcagcaaagttgaccttttcacgctcataaacatttgtgactaatgtggtttttcccaacccacctataccagatactgttatcactgctctatctggctcatcagagtacaaccatccagccagcaatctcttgtggtcttcaatccccacaagatcttcatctttgacaagatatgggaagttgtcgtgagaccgtggtctgccactctcagcaagctggttgggattgagctgggaagggtgcaaccactgctctttaagctttataacttgctggatttgcttctctaacttgactacctcctcagcaatatcactaaataccacgacgtaatgagaacctttaatgaagtacttcttcaagaaaccttcttcctcaagttgaatagcatgatatgagtacttgtccattacgtcctcaacatggtaggctaactttctcacctctgcaatccaattctttacaactatatcagtgaggtatgaggtgcctatctgtagtataacactgttcatgattgtcagttgcttccttatttcttcgaccttctctggcagctccttcaaattagtaaccttttcagacaccttggcaatgacagccttggcagcttcatctgctaacacgttgccaacctttttgacagcaaggagcactgcctcagccatttgttctgaaagaacacacaccatcatgttacaaaagagaacaacaagtggcttgcgatttctagtctccaatttaacttatatatcaaagaaaatttttatttattgatgcctttaattatcactattttcctggagaaatgtgtgctttcattgaacagaactccaatggtttctgcatgaaatgtgtggcactgttcagacttggataataatggtccactgtgagaaaagaaataatggtactcatgcaccgtgtccatagagtaattcttttaccacaagcatctatgatctcataaaacgttttatgagaagttaatggcatctcataagatacaactcagcaaataaatgacaagctttatttgatttgcttgttgggcacagagtaggattccaaatcagaatggcaaacagtatcatatatgaaggccagtgctaagttatattttattaattgacttggaacattttttttttgacaccttactttggagttcggaaatcggctacgagattttctggacaaactatgctttcggaagagctctcctgcttggctcagtaaaagaaacattgctataatgttatacatcatgaagtacagctattctgtatgtagttgtttactttaatttgagtatgcatttattacatttcaccaacatacatgtgtttagttcctgaaattggggagaagtttggagaaagttggtagtttggaaaaaaagttgggagtttatgtgtgtaggaaagttttggatgtgacgtgatgtgatggaaagttgggagttggggggaagtttggtgtgaactaaacacaccctatacagcttcagctgaagcaacttgtgggctgaacatagttcatacatattcaaagaaaataactggttcatcaacaagacagtgagcagaaagactatacattagacaagcaagtttagcagcattacctggaacattagactaacaactatgaagaacaaaaaaatgatccatagaacagaacacacaacaaatacactgccatactgagtagtgatttatatgcttgctcacctgctggaagaccagagaacagggctggagcgcaggtgctgtacggtcagtgtgcagaaccctgcaggatcaaacaagagagaatgagaacgcagtcagcaaagcagttcgtgatcgtgcacaaccggggacaagatttggccaaaaaaaaaaaaagcgccgcgcgcaggccgcggaaccacaccagacgaaggcgtggcggcctcccttcgccggatgcgtcggcgcgcagcgtgcctagactcgcggtcgggaacgcgcattccgacgaacacttggcgggcgccgcaaagggggggacactgggtgttcatcccaaagggggagatgatcaatccttgcaaagtcaactcgcgtaccaatccgtcaacggaatgcggatcgaaatcgagagaaggaggagttcttcgcgatcttcgggtgatactaaagtcgccgagcacgagcaaatcgagagagacaacaaaaaatgctcagcggcgaaacggctctgcagcatgaactactactaatcgctcccaagctccatggattctgcaagtgaagggatgcacgcacctgatgatgaatcgatcgcacgggagctcgccgacgagagaggaggagaccttgacccgctcggagctcttgagtcttgagccagctgcctgcagcttggttcttcttcttttcttttcttttctttttttttcccttatttctgtctgggtcaagtcgtcgctgtctttttcgtctcctaaaataatttctgggaattagcgtgggtttagttcgtgaaaattgttcgatgtcacataggacactgtatatcagaaaagattttcggacacgaatgaaaaaactaatttcataactcgcctggaaaccgcaagatgaatttattaagtctaattaatccgtcattagcatatatgggttattgtagcacttatggctaatcatggactaattagactcaaaagattcgtctcgcgatttccatgcaaactgtgcaattaggttttttctatatttaatactctatatatgtgtctaaagattcgatgtgatatttttggacaaaattttttaagaactaaggcattgtttagttggagaaaatttttaagtttggttgtcacatcggatatacggacacacatttgaagtattaaacgtagtgtaataacaaaataatacgagatgaatttattaagtctaattaatttgtcattagcaaatatataccgtagctccacgttgtcaaaacatgaagcgatatcttctctcaaatttaggtgggcccaccactaatttttttcctaggctgccctaccacgaaaatcgctcccctcagtcatctctgtgggtccgcatttgacttatttcctaataaatcaaaacagcttattagaaaataaaaataaatttatagatgaaacttttataaatgtgttcttggtaacttaaaagccaatgttgtaaaagaaactacgttaaaaatatctcaatctcaaaattaagtttaaaaattcaaaatttggtttttttttttttttggtgattagccatccgatgggagccttccctgagcaaatctcccgcaccaacctcctcaacctccgccactccttccccttctctctctctctcctatcctatccatctttccgttctctcccaggggggcgagccgaccccccacccccctcctctcctcccaccggtagcacaaatctggcagtggccctcctttcctaagccggcaccgcttgggagaagatatggcgacgacgagtgccgtatcttcttccgcttgggagggcaagtgcgggggctcgagcggcggcaaaaagagaggagagaaagagaagagatgggggtggcgtggtgaggatggggctcggctctcctcttattggcggcgtgagcttggcgggacgcggcgagctggcggctaggcaccgcgaatccgggcatagccggctagctgctacggcgagcggatgacgatgcggtggcgcggcgacgtgatgacgatggtgacggcgcgacgtcatgggaggcggcgatggaacgcgaggtgacgcgcggggagcgggtttggcgacgggacaatggtgacgcgcgacggacggcggctacggccgggaatcgagcggtagggttcttctcagagcgaggggacgcgagcggcgtcatgcggtggtggcaacgcgacgcgagagagagagataggcgcgggctcggcggcttcccgggaggagacgggcgacaaggcgcggtgtgacaagtggagagggcgcgcgtccgcgggagcccgggataggacggcgtggcgtcacgaggaggtggcgacgggacgacgcggcgccgtgtctcccggagagaaaccggagcgagggatgggatgtgattcccactgggatatgcggcttggcagggcgcggctttggcgcgatgcggtcctggcacggcgcgcggcgcatgggagggcggctcggtgcgtcagcactgcaacgactcagtgctcgggcgagacatttcgtcgaacatgtggtgcgcgcgcgcgaccggtcggaggaggaagacaaacagcggtgggctgggccggtgcgggaaggccatgggccggcctgctcggggagagagaggagaggaaagggagttgggctgagggaagaaaaaggaaaaaaagaggcccaaatgaatagtgacctttgacctttcacattttctctaggatttggaatttgaaattttggggagtttttggaggaatctaatttgaattttgtcctagggttttgacaacaactcgaggggatttctaagagaggatttgagacctatttggcacaaaatcaaataagaaccaaatttatactcaaaatgtttaaatgacaagatttttaaataaatgaaaaattcaagggtgctacaaaattacaaagagcctctttaaggtaaagaaagcatgcaacttctagacacatatttctgcaacatgcagcatcttcttgtgcatctcattaccattccattggattttgaagtctttatgcaggttcgacagggagagcttcttcagggagttaagggactcaatgccttgagggaccttgtccagcttcggcagcaacacaatgtacaagccttcaatgcatggaagggcgccatccatgatctttatctgcttgacatcaggcatctgcctcaagacaagagtctttagtttggggaatgcctttgcacgaagaactaatgttgctgcactctgcatgttgttcagttttagataagtgaggtccgacaagttcgacgcaagcatccccagtggatcttccccgagatgacaccaacttagggataaatatttgagatgtgtactgtggctacggaatatcgggtagtccaatgtactcttggcccattgccctctgacaattaacctgtggagttctgtggaacttggcttgagagcctcaaaagagagtggctcattctcattccttgcagaaagaagcaaactggaaagtagcggcatatttgacagtgtagcaaaaatattatcacaatcagcagagcttatgttgtcaatccatacactttttagttgtatgagtttcttcaactgctcagctaagtccttgctggcttcaacagtctccagagtttgtagttctttcaggttggatagatctttaggtgcctgcattcctacaaagtatcggaactccgactgcttctcgtcaacacatctatcagcaaacaagtgtcttagcttcttgattttagtgattcctcgtggtagcttctctatctttgtttgcttcatgtccagagtgtggaggttcagcaacttttcaatggagtctgggagtgacttaaccttggtcctccgtaagccaatgtaacgtagattaaacaaattccctatagatggtggaacttgagtgatttctgaatcttgaagctcaagaacagtaaggtagcttgattcaaaaattgaggacaacatgtctcgggaagatgaaattgcctcaagtgatactagggttcgaagacgtggaagttttggtgcagtaccagcactatgtttccattcataagatgatagacgacgaacatctttatcaatatgtatcattgtgcccaaatcatttgcagagccaaacttctcctctttagcaacagaaagggccaggtctcgcacaatatcatgcattgtacaggtagacaccctacctagctcatcattctccttaacttgaagcatattccgatatatcagttccatgagattttcctcggctaccacctctggtgtgttgctctctttgctttggacaaagccttctgcaatccacagtcgcacaaggctctcacgggaaatcgggtagtcttctgggaataagctgcagtacagaaaacagtttctgagttctcctgataggtcatggtagctcatatttaaaattgctcgaacatgattgttctttgatagctcacttctaagctgtttgtatgtttgattccaaacatagtgtgtccgtggtcttgaagacaagaggctgcctattgagacaatggctagtggtaggccctgacagcgttctactatagatgtggcaactttcacaagctcattgggacactcatggtccttgttgctataaaatgcccgtctgcagaatagataaaaggcttgagtatcacccagtggctgcagatcaaggcgacatgttgaggaagcaagagctgcaacatgattcttccgtgtagtgataatcacacgacttgcttggttgccctcgattgcatcacgtatcttgaagtatgcttcttggtcccagacatcatccagtacaatcaagcatttcctatctttgagtgttcgctttatttcctctttcaaatcatatgcatccttttcatcaacgttaccagtgtaaccaacttttctaagcagctttctcaacaagacttccacagtgtaggtttgagacacgaccatccacgcatgagcagagaagttgatcttttcacgttcataaatatttgtgaccagtgtggttttccccagtccacccatacctgacaccgttatcaccttgttgcccatgtcattagagtacagccattcagtcagcagtctcctgttgtcttcaatccccacaagatcttcatctttcacaagttctgggaagctgtcttgggacctctgtctttccatctcagtgagcgggtcagaaacaagctgggatggatgcaaccactgatccttcagttctataacttgtttgatttccttctctatcttgactacctcattagcaatttcagtgaaaacaataacataatgtgatgctttgatgaagtattttttaaggaaccattcttccgccatttgcacagagtagtacgagtatttgtccatgacatcctcaacacggtaggccaccttcctcacctccccaatccaacccttgacgacttcatcagtgaggtatgccgtgcctatctgcaataaaacgttgttcattgttgtcacttgcttcctcatttgctcaatcttctcatccagatccttcagattattaaccttttcagacagtttggcaatcaattctttagcgatttcatttgctaaagcatcaccgatcttcgttagagcaaggaggaccgcctctgccat
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| CDS seq | atggcagaggcggtcctccttgctctaacgaagatcggtgatgctttagcaaatgaaatcgctaaagaattgattgccaaactgtctgaaaaggttaataatctgaaggatctggatgagaagattgagcaaatgaggaagcaagtgacaacaatgaacaacgttttattgcagataggcacggcatacctcactgatgaagtcgtcaagggttggattggggaggtgaggaaggtggcctaccgtgttgaggatgtcatggacaaatactcgtactactctgtgcaaatggcggaagaatggttccttaaaaaatacttcatcaaagcatcacattatgttattgttttcactgaaattgctaatgaggtagtcaagatagagaaggaaatcaaacaagttatagaactgaaggatcagtggttgcatccatcccagcttgtttctgacccgctcactgagatggaaagacagaggtcccaagacagcttcccagaacttgtgaaagatgaagatcttgtggggattgaagacaacaggagactgctgactgaatggctgtactctaatgacatgggcaacaaggtgataacggtgtcaggtatgggtggactggggaaaaccacactggtcacaaatatttatgaacgtgaaaagatcaacttctctgctcatgcgtggatggtcgtgtctcaaacctacactgtggaagtcttgttgagaaagctgcttagaaaagttggttacactggtaacgttgatgaaaaggatgcatatgatttgaaagaggaaataaagcgaacactcaaagataggaaatgcttgattgtactggatgatgtctgggaccaagaagcatacttcaagatacgtgatgcaatcgagggcaaccaagcaagtcgtgtgattatcactacacggaagaatcatgttgcagctcttgcttcctcaacatgtcgccttgatctgcagccactgggtgatactcaagccttttatctattctgcagacgggcattttatagcaacaaggaccatgagtgtcccaatgagcttgtgaaagttgccacatctatagtagaacgctgtcagggcctaccactagccattgtctcaataggcagcctcttcttattcccagaagactacccgatttcccgtgagagccttgtgcgactgtggattgcagaaggctttgtccaaagcaaagagagcaacacaccagaggtggtagccgaggaaaatctcatggaactgatatatcggaatatgcttcaagttaaggagaatgatgagctaggtagggtgtctacctgtacaatgcatgatattgtgcgagacctggccctttctgttgctaaagaggagaagtttggctctgcaaatgatttgggcacaatgatacatattgataaagatgttcgtcgtctatcatcttatgaatggaaacatagtgctggtactgcaccaaaacttccacgtcttcgaaccctagtatcacttgaggcaatttcatcttcccgagacatgttgtcctcaatttttgaatcaagctaccttactgttcttgagcttcaagattcagaaatcactcaagttccaccatctatagggaatttgtttaatctacgttacattggcttacggaggaccaaggttaagtcactcccagactccattgaaaagttgctgaacctccacactctggacatgaagcaaacaaagatagagaagctaccacgaggaatcactaaaatcaagaagctaagacacttgtttgctgatagatgtgttgacgagaagcagtcggagttccgatactttgtaggaatgcaggcacctaaagatctatccaacctgaaagaactacaaactctggagactgttgaagccagcaaggacttagctgagcagttgaagaaactcatacaactaaaaagtgtatggattgacaacataagctctgctgattgtgataatatttttgctacactgtcaaatatgccgctactttccagtttgcttctttctgcaaggaatgagaatgagccactctcttttgaggctctcaagccaagttccacagaactccacaggttaattgtcagagggcaatgggccaagagtacattggactacccgatattccgtagccacagtacacatctcaaatatttatccctaagttggtgtcatctcggggaagatccactggggatgcttgcgtcgaacttgtcggacctcacttatctaaaactgaacaacatgcagagtgcagcaacattagttcttcgtgcaaaggcattccccaaactaaagactcttgtcttgaggcagatgcctgatgtcaagcagataaagatcatggatggcgcccttccatgcattgaaggcttgtacattgtgttgctgccgaagctggacaaggtccctcaaggcattgagtcccttaactccctgaagaagctctccctgtcgaacctgcataaagacttcaaaatccaatggaatggtaatgagatgcacaagaagatgctgcatgcagctggctcaagactcaagagctccgagcgggtcaaggtctcctcctctctcgtcggcgagctcccgtgcgatcgattcatcatcagggttctgcacactgaccgtacagcacctgcgctccagccctgttctctggtcttccagcaggcagtgctccttgctgtcaaaaaggttggcaacgtgttagcagatgaagctgccaaggctgtcattgccaaggtgtctgaaaaggttactaatttgaaggagctgccagagaaggtcgaagaaataaggaagcaactgacaatcatgaacagtgttatactacagataggcacctcatacctcactgatatagttgtaaagaattggattgcagaggtgagaaagttagcctaccatgttgaggacgtaatggacaagtactcatatcatgctattcaacttgaggaagaaggtttcttgaagaagtacttcattaaaggttctcattacgtcgtggtatttagtgatattgctgaggaggtagtcaagttagagaagcaaatccagcaagttataaagcttaaagagcagtggttgcacccttcccagctcaatcccaaccagcttgctgagagtggcagaccacggtctcacgacaacttcccatatcttgtcaaagatgaagatcttgtggggattgaagaccacaagagattgctggctggatggttgtactctgatgagccagatagagcagtgataacagtatctggtataggtgggttgggaaaaaccacattagtcacaaatgtttatgagcgtgaaaaggtcaactttgctgctcatgcatggattgttgtctcccagacctacaatgtggaagctctattaagaaagctccttagaaagattgggtctactgaactgtcacttgatagcttgaacaatatggatgcacatgacctgaaagaagaaattaagaaaaagattgaagatagcaaatgtttgattgtgctggatgatgtctgggacaaaaaagtgtactttcagatgcaagatgcattccagaatcttcaagcaactcgagtcatcatcacaactcgagagaatgatgttgcagcccttgctacctcaacgcgccgtctcaacctccagcctttgaatggcgctgatgcatttgaactcttctgtagaagggctttctataacaagggccacaaatgccccaaggagctagagaaggttgctaattctatagtggataggtgtcatggcctaccactagcaattgtaacgataggaagccttctgtcttcaagaccagcagcagaatttgtttggaataaaatatacaaacagcttcggactgagctagcaaacaatgatcatgtccgagcaattctaaatttgagctaccatgacctatcaggagacctcagaaattgcttcttgtactgtagcttgttccctgaagactacacaatgacacgggagagccttctgaggttgtgggttgcagaaggctttgtgctaggcaaagaaaagaacacgctagaggatgtcgcagagggaaaccttatggaactgatccaccggaatatgctggaagttgtggacaatgatgagattggcagggtaaactcctgtaagatgcatgacattgtgcgtgtattggctctttctattgctaaagaggagaggtttggttcagccaatgatcttggcacaatgttgcttatggataaggaagttcgtcgcttgtcaacatgtggatggagtgatgatactgtatcaacagttaaattcatgcgccttcggaccctgatctcactttcgacaacctcattgccccttgagatgttatcctcaattttgtgtggatctagctaccttacagttcttgagctgcaagactcagagattactgaagtgccaacttctattgggaatatgtttaatctacattacattggcttacgacgcaccaaagtcaaatcacttccggagtctattggaaagttatctaacctccacacgcttgacatcaagcaaaccaaaattgagaagctaccacgaagtattgttaagatcaagaagctaagacaccttatagccgatagatacgttgatgagaggcagtcagatttccggtactttgttggaatgcatgcccctaaagaactttccaacttgcaagagctgcagactctagaaactgtggagtctagcaaagacctggctgagcaactgaagaaattgatgcaactaagaagtgtgtggattgacaacataagttctgctgattgtgcaaatattttcgctacattgtcaagcatgccatttctttccagcttgcttctttctgcaaaagacgaaaatgaggaactctgcttcgaggctcttaggccaaggtcaacagaactccacagactaatcatcagagggcgatgggctaagggtacacttgattgcccaatatttcacgggaacggcacaaatcttaaatatctagctctaagttggtgtcatcttggtgaagatccactagggatgctcgcttcgcatttgccgaacctcacttatttgagactgaacaacatgcatagtgcaaacattttggttctttctacacagtcttttccccacctgaagacacttgtcttaaagcacatgcccaatgtgaaccagctaaagatcatggatggggcacttccatccattgaaggtttgtacgttgtgtcactctcaaagctggatatagtccctgagggcattgagtcccttcggaccctgaagaagctctggcttctgtacctgcacagggacttcaaaactcaatggcacaaaaacagaatgcatcagaagatgcagcatgttccagagattcgtgtttag
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| Protein seq | MAEAVLLALTKIGDALANEIAKELIAKLSEKVNNLKDLDEKIEQMRKQVTTMNNVLLQIGTAYLTDEVVKGWIGEVRKVAYRVEDVMDKYSYYSVQMAEEWFLKKYFIKASHYVIVFTEIANEVVKIEKEIKQVIELKDQWLHPSQLVSDPLTEMERQRSQDSFPELVKDEDLVGIEDNRRLLTEWLYSNDMGNKVITVSGMGGLGKTTLVTNIYEREKINFSAHAWMVVSQTYTVEVLLRKLLRKVGYTGNVDEKDAYDLKEEIKRTLKDRKCLIVLDDVWDQEAYFKIRDAIEGNQASRVIITTRKNHVAALASSTCRLDLQPLGDTQAFYLFCRRAFYSNKDHECPNELVKVATSIVERCQGLPLAIVSIGSLFLFPEDYPISRESLVRLWIAEGFVQSKESNTPEVVAEENLMELIYRNMLQVKENDELGRVSTCTMHDIVRDLALSVAKEEKFGSANDLGTMIHIDKDVRRLSSYEWKHSAGTAPKLPRLRTLVSLEAISSSRDMLSSIFESSYLTVLELQDSEITQVPPSIGNLFNLRYIGLRRTKVKSLPDSIEKLLNLHTLDMKQTKIEKLPRGITKIKKLRHLFADRCVDEKQSEFRYFVGMQAPKDLSNLKELQTLETVEASKDLAEQLKKLIQLKSVWIDNISSADCDNIFATLSNMPLLSSLLLSARNENEPLSFEALKPSSTELHRLIVRGQWAKSTLDYPIFRSHSTHLKYLSLSWCHLGEDPLGMLASNLSDLTYLKLNNMQSAATLVLRAKAFPKLKTLVLRQMPDVKQIKIMDGALPCIEGLYIVLLPKLDKVPQGIESLNSLKKLSLSNLHKDFKIQWNGNEMHKKMLHAAGSRLKSSERVKVSSSLVGELPCDRFIIRVLHTDRTAPALQPCSLVFQQAVLLAVKKVGNVLADEAAKAVIAKVSEKVTNLKELPEKVEEIRKQLTIMNSVILQIGTSYLTDIVVKNWIAEVRKLAYHVEDVMDKYSYHAIQLEEEGFLKKYFIKGSHYVVVFSDIAEEVVKLEKQIQQVIKLKEQWLHPSQLNPNQLAESGRPRSHDNFPYLVKDEDLVGIEDHKRLLAGWLYSDEPDRAVITVSGIGGLGKTTLVTNVYEREKVNFAAHAWIVVSQTYNVEALLRKLLRKIGSTELSLDSLNNMDAHDLKEEIKKKIEDSKCLIVLDDVWDKKVYFQMQDAFQNLQATRVIITTRENDVAALATSTRRLNLQPLNGADAFELFCRRAFYNKGHKCPKELEKVANSIVDRCHGLPLAIVTIGSLLSSRPAAEFVWNKIYKQLRTELANNDHVRAILNLSYHDLSGDLRNCFLYCSLFPEDYTMTRESLLRLWVAEGFVLGKEKNTLEDVAEGNLMELIHRNMLEVVDNDEIGRVNSCKMHDIVRVLALSIAKEERFGSANDLGTMLLMDKEVRRLSTCGWSDDTVSTVKFMRLRTLISLSTTSLPLEMLSSILCGSSYLTVLELQDSEITEVPTSIGNMFNLHYIGLRRTKVKSLPESIGKLSNLHTLDIKQTKIEKLPRSIVKIKKLRHLIADRYVDERQSDFRYFVGMHAPKELSNLQELQTLETVESSKDLAEQLKKLMQLRSVWIDNISSADCANIFATLSSMPFLSSLLLSAKDENEELCFEALRPRSTELHRLIIRGRWAKGTLDCPIFHGNGTNLKYLALSWCHLGEDPLGMLASHLPNLTYLRLNNMHSANILVLSTQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESLRTLKKLWLLYLHRDFKTQWHKNRMHQKMQHVPEIRV |
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| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0007860 | OsPr106_11g0007860.01 | Chr11 | 6753022 | 6762487 | - | NAM | ||
| CDS seq | atggcagaggcggtcctccttgctctaacgaagatcggtgatgctttagcaaatgaaatcgctaaagaattgattgccaaactgtctgaaaaggttaataatctgaaggatctggatgagaagattgagcaaatgaggaagcaagtgacaacaatgaacaacgttttattgcagataggcacggcatacctcactgatgaagtcgtcaagggttggattggggaggtgaggaaggtggcctaccgtgttgaggatgtcatggacaaatactcgtactactctgtgcaaatggcggaagaatggttccttaaaaaatacttcatcaaagcatcacattatgttattgttttcactgaaattgctaatgaggtagtcaagatagagaaggaaatcaaacaagttatagaactgaaggatcagtggttgcatccatcccagcttgtttctgacccgctcactgagatggaaagacagaggtcccaagacagcttcccagaacttgtgaaagatgaagatcttgtggggattgaagacaacaggagactgctgactgaatggctgtactctaatgacatgggcaacaaggtgataacggtgtcaggtatgggtggactggggaaaaccacactggtcacaaatatttatgaacgtgaaaagatcaacttctctgctcatgcgtggatggtcgtgtctcaaacctacactgtggaagtcttgttgagaaagctgcttagaaaagttggttacactggtaacgttgatgaaaaggatgcatatgatttgaaagaggaaataaagcgaacactcaaagataggaaatgcttgattgtactggatgatgtctgggaccaagaagcatacttcaagatacgtgatgcaatcgagggcaaccaagcaagtcgtgtgattatcactacacggaagaatcatgttgcagctcttgcttcctcaacatgtcgccttgatctgcagccactgggtgatactcaagccttttatctattctgcagacgggcattttatagcaacaaggaccatgagtgtcccaatgagcttgtgaaagttgccacatctatagtagaacgctgtcagggcctaccactagccattgtctcaataggcagcctcttcttattcccagaagactacccgatttcccgtgagagccttgtgcgactgtggattgcagaaggctttgtccaaagcaaagagagcaacacaccagaggtggtagccgaggaaaatctcatggaactgatatatcggaatatgcttcaagttaaggagaatgatgagctaggtagggtgtctacctgtacaatgcatgatattgtgcgagacctggccctttctgttgctaaagaggagaagtttggctctgcaaatgatttgggcacaatgatacatattgataaagatgttcgtcgtctatcatcttatgaatggaaacatagtgctggtactgcaccaaaacttccacgtcttcgaaccctagtatcacttgaggcaatttcatcttcccgagacatgttgtcctcaatttttgaatcaagctaccttactgttcttgagcttcaagattcagaaatcactcaagttccaccatctatagggaatttgtttaatctacgttacattggcttacggaggaccaaggttaagtcactcccagactccattgaaaagttgctgaacctccacactctggacatgaagcaaacaaagatagagaagctaccacgaggaatcactaaaatcaagaagctaagacacttgtttgctgatagatgtgttgacgagaagcagtcggagttccgatactttgtaggaatgcaggcacctaaagatctatccaacctgaaagaactacaaactctggagactgttgaagccagcaaggacttagctgagcagttgaagaaactcatacaactaaaaagtgtatggattgacaacataagctctgctgattgtgataatatttttgctacactgtcaaatatgccgctactttccagtttgcttctttctgcaaggaatgagaatgagccactctcttttgaggctctcaagccaagttccacagaactccacaggttaattgtcagagggcaatgggccaagagtacattggactacccgatattccgtagccacagtacacatctcaaatatttatccctaagttggtgtcatctcggggaagatccactggggatgcttgcgtcgaacttgtcggacctcacttatctaaaactgaacaacatgcagagtgcagcaacattagttcttcgtgcaaaggcattccccaaactaaagactcttgtcttgaggcagatgcctgatgtcaagcagataaagatcatggatggcgcccttccatgcattgaaggcttgtacattgtgttgctgccgaagctggacaaggtccctcaaggcattgagtcccttaactccctgaagaagctctccctgtcgaacctgcataaagacttcaaaatccaatggaatggtaatgagatgcacaagaagatgctgcatgcagctggctcaagactcaagagctccgagcgggtcaaggtctcctcctctctcgtcggcgagctcccgtgcgatcgattcatcatcagggttctgcacactgaccgtacagcacctgcgctccagccctgttctctggtcttccagcaggcagtgctccttgctgtcaaaaaggttggcaacgtgttagcagatgaagctgccaaggctgtcattgccaaggtgtctgaaaaggttactaatttgaaggagctgccagagaaggtcgaagaaataaggaagcaactgacaatcatgaacagtgttatactacagataggcacctcatacctcactgatatagttgtaaagaattggattgcagaggtgagaaagttagcctaccatgttgaggacgtaatggacaagtactcatatcatgctattcaacttgaggaagaaggtttcttgaagaagtacttcattaaaggttctcattacgtcgtggtatttagtgatattgctgaggaggtagtcaagttagagaagcaaatccagcaagttataaagcttaaagagcagtggttgcacccttcccagctcaatcccaaccagcttgctgagagtggcagaccacggtctcacgacaacttcccatatcttgtcaaagatgaagatcttgtggggattgaagaccacaagagattgctggctggatggttgtactctgatgagccagatagagcagtgataacagtatctggtataggtgggttgggaaaaaccacattagtcacaaatgtttatgagcgtgaaaaggtcaactttgctgctcatgcatggattgttgtctcccagacctacaatgtggaagctctattaagaaagctccttagaaagattgggtctactgaactgtcacttgatagcttgaacaatatggatgcacatgacctgaaagaagaaattaagaaaaagattgaagatagcaaatgtttgattgtgctggatgatgtctgggacaaaaaagtgtactttcagatgcaagatgcattccagaatcttcaagcaactcgagtcatcatcacaactcgagagaatgatgttgcagcccttgctacctcaacgcgccgtctcaacctccagcctttgaatggcgctgatgcatttgaactcttctgtagaagggctttctataacaagggccacaaatgccccaaggagctagagaaggttgctaattctatagtggataggtgtcatggcctaccactagcaattgtaacgataggaagccttctgtcttcaagaccagcagcagaatttgtttggaataaaatatacaaacagcttcggactgagctagcaaacaatgatcatgtccgagcaattctaaatttgagctaccatgacctatcaggagacctcagaaattgcttcttgtactgtagcttgttccctgaagactacacaatgacacgggagagccttctgaggttgtgggttgcagaaggctttgtgctaggcaaagaaaagaacacgctagaggatgtcgcagagggaaaccttatggaactgatccaccggaatatgctggaagttgtggacaatgatgagattggcagggtaaactcctgtaagatgcatgacattgtgcgtgtattggctctttctattgctaaagaggagaggtttggttcagccaatgatcttggcacaatgttgcttatggataaggaagttcgtcgcttgtcaacatgtggatggagtgatgatactgtatcaacagttaaattcatgcgccttcggaccctgatctcactttcgacaacctcattgccccttgagatgttatcctcaattttgtgtggatctagctaccttacagttcttgagctgcaagactcagagattactgaagtgccaacttctattgggaatatgtttaatctacattacattggcttacgacgcaccaaagtcaaatcacttccggagtctattggaaagttatctaacctccacacgcttgacatcaagcaaaccaaaattgagaagctaccacgaagtattgttaagatcaagaagctaagacaccttatagccgatagatacgttgatgagaggcagtcagatttccggtactttgttggaatgcatgcccctaaagaactttccaacttgcaagagctgcagactctagaaactgtggagtctagcaaagacctggctgagcaactgaagaaattgatgcaactaagaagtgtgtggattgacaacataagttctgctgattgtgcaaatattttcgctacattgtcaagcatgccatttctttccagcttgcttctttctgcaaaagacgaaaatgaggaactctgcttcgaggctcttaggccaaggtcaacagaactccacagactaatcatcagagggcgatgggctaagggtacacttgattgcccaatatttcacgggaacggcacaaatcttaaatatctagctctaagttggtgtcatcttggtgaagatccactagggatgctcgcttcgcatttgccgaacctcacttatttgagactgaacaacatgcatagtgcaaacattttggttctttctacacagtcttttccccacctgaagacacttgtcttaaagcacatgcccaatgtgaaccagctaaagatcatggatggggcacttccatccattgaaggtttgtacgttgtgtcactctcaaagctggatatagtccctgagggcattgagtcccttcggaccctgaagaagctctggcttctgtacctgcacagggacttcaaaactcaatggcacaaaaacagaatgcatcagaagatgcagcatgttccagagattcgtgtttag
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| Protein seq | MAEAVLLALTKIGDALANEIAKELIAKLSEKVNNLKDLDEKIEQMRKQVTTMNNVLLQIGTAYLTDEVVKGWIGEVRKVAYRVEDVMDKYSYYSVQMAEEWFLKKYFIKASHYVIVFTEIANEVVKIEKEIKQVIELKDQWLHPSQLVSDPLTEMERQRSQDSFPELVKDEDLVGIEDNRRLLTEWLYSNDMGNKVITVSGMGGLGKTTLVTNIYEREKINFSAHAWMVVSQTYTVEVLLRKLLRKVGYTGNVDEKDAYDLKEEIKRTLKDRKCLIVLDDVWDQEAYFKIRDAIEGNQASRVIITTRKNHVAALASSTCRLDLQPLGDTQAFYLFCRRAFYSNKDHECPNELVKVATSIVERCQGLPLAIVSIGSLFLFPEDYPISRESLVRLWIAEGFVQSKESNTPEVVAEENLMELIYRNMLQVKENDELGRVSTCTMHDIVRDLALSVAKEEKFGSANDLGTMIHIDKDVRRLSSYEWKHSAGTAPKLPRLRTLVSLEAISSSRDMLSSIFESSYLTVLELQDSEITQVPPSIGNLFNLRYIGLRRTKVKSLPDSIEKLLNLHTLDMKQTKIEKLPRGITKIKKLRHLFADRCVDEKQSEFRYFVGMQAPKDLSNLKELQTLETVEASKDLAEQLKKLIQLKSVWIDNISSADCDNIFATLSNMPLLSSLLLSARNENEPLSFEALKPSSTELHRLIVRGQWAKSTLDYPIFRSHSTHLKYLSLSWCHLGEDPLGMLASNLSDLTYLKLNNMQSAATLVLRAKAFPKLKTLVLRQMPDVKQIKIMDGALPCIEGLYIVLLPKLDKVPQGIESLNSLKKLSLSNLHKDFKIQWNGNEMHKKMLHAAGSRLKSSERVKVSSSLVGELPCDRFIIRVLHTDRTAPALQPCSLVFQQAVLLAVKKVGNVLADEAAKAVIAKVSEKVTNLKELPEKVEEIRKQLTIMNSVILQIGTSYLTDIVVKNWIAEVRKLAYHVEDVMDKYSYHAIQLEEEGFLKKYFIKGSHYVVVFSDIAEEVVKLEKQIQQVIKLKEQWLHPSQLNPNQLAESGRPRSHDNFPYLVKDEDLVGIEDHKRLLAGWLYSDEPDRAVITVSGIGGLGKTTLVTNVYEREKVNFAAHAWIVVSQTYNVEALLRKLLRKIGSTELSLDSLNNMDAHDLKEEIKKKIEDSKCLIVLDDVWDKKVYFQMQDAFQNLQATRVIITTRENDVAALATSTRRLNLQPLNGADAFELFCRRAFYNKGHKCPKELEKVANSIVDRCHGLPLAIVTIGSLLSSRPAAEFVWNKIYKQLRTELANNDHVRAILNLSYHDLSGDLRNCFLYCSLFPEDYTMTRESLLRLWVAEGFVLGKEKNTLEDVAEGNLMELIHRNMLEVVDNDEIGRVNSCKMHDIVRVLALSIAKEERFGSANDLGTMLLMDKEVRRLSTCGWSDDTVSTVKFMRLRTLISLSTTSLPLEMLSSILCGSSYLTVLELQDSEITEVPTSIGNMFNLHYIGLRRTKVKSLPESIGKLSNLHTLDIKQTKIEKLPRSIVKIKKLRHLIADRYVDERQSDFRYFVGMHAPKELSNLQELQTLETVESSKDLAEQLKKLMQLRSVWIDNISSADCANIFATLSSMPFLSSLLLSAKDENEELCFEALRPRSTELHRLIIRGRWAKGTLDCPIFHGNGTNLKYLALSWCHLGEDPLGMLASHLPNLTYLRLNNMHSANILVLSTQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESLRTLKKLWLLYLHRDFKTQWHKNRMHQKMQHVPEIRV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0007860 | OsPr106_11g0007860.02 | Chr11 | 6752748 | 6757479 | - | IsoSeq | ||
| CDS seq | agaagaagaaccaagctgcaggcagctggctcaagactcaagagctccgagcgggtcaaggtctcctcctctctcgtcggcgagctcccgtgcgatcgattcatcatcagggttctgcacactgaccgtacagcacctgcgctccagccctgttctctggtcttccagcagaacaaatggctgaggcagtgctccttgctgtcaaaaaggttggcaacg
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| Protein seq | RRRTKLQAAGSRLKSSERVKVSSSLVGELPCDRFIIRVLHTDRTAPALQPCSLVFQQNKWLRQCSLLSKRLAT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr11 | 6755736 | 6756811 | - | OsPr106_11g0007860.02 | OsPr106_11g0007860.01,OsPr106_11g0007860.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.050933 | 5.437952 | 4.828925 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0229700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11950 | RBH | 0.258888 | 0.289718 | 0.132135 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0229700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008030 | SBH | 0.193260 | 19.767826 | 1.430310 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008040 | RBH | 0.198904 | 6.296239 | 0.434316 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007910 | RBH | 2.060827 | 18.695328 | 1.356757 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007770 | RBH | 0.137865 | 0.304908 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007790 | RBH | 3.349424 | 9.534272 | 15.472604 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0105900 | RBH | 0.109065 | 0.603869 | 0.012481 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007780 | RBH | 0.111396 | 0.421400 | 1.370011 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0112200 | SBH | 15.4623085 | 6.930455 | 2.7797995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007950 | RBH | 0.0 | 0.257585 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007980 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008000 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007880 | RBH | 0.437642 | 0.0 | 0.310380 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007910 | RBH | 0.192919 | 3.346177 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008030 | SBH | 0.0 | 0.0 | 0.398591 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007870 | RBH | 0.0 | 4.353945 | 0.505862 |
