Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0007820 | OGI:11020450 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:6684229-6690547 | ||||||||
| Gene Symbol | rNBS10 | ||||||||||
| DNA seq | atggcagaggtggaagtcactttgctggagggcgggatcgagtggctggcgcagaccatcctggagaacctggaaagcgacaagctggacgagtggattcgtcaggttgggctctctgatgccaccgagaagcttaagtcagagatggagagggtggaagtggtggtcgctgccgttaggcagagagcaatcgggaacaagctgacccgatcgctcggtcgtctcagggagctgctctacgacgccgacaatgccgtcgatgagctcgactactacaggctccagcaccaggtccaaggaggtaatataagcgtccgtacgcatgtaagatgtacatcacctctttcgtctgttggttcaaatgcatggcaacaaagcgctcctgaaagcgcgcataaacatgcaccagtgcaagcagatcaggtagtgagaccgaaatttaccactgatatttcgagaagcagtggacggcctggtggcaaaagacggtccaaggtatggaagtactttgatggcactaaatatgaaaataaaaaggctgtgaaatgtattttctgtaacactgagctcaagtgtcaaaatggggcgtcgggtttgcatattcacctccgtagcaagcgttgtacggataagcgtaaagacctatcgaggtaggatttatgttctcttcttttctttttctttaaaaatagttaaaaaagtaagtgctgaactaatatcgctcttactgttgaactctgtggttccggcagcagaaaaaggacgaggattattggtgagtcaacgcacaacaatgcagtagtcgacgacctcgactactacaggctccagcaccaggtccaaggaggtaatataagcgtaactagatgaaaccccgcgtgttgctgcgggacttcaatataataacaataagtaaaaataatgtgtaagataacttaacaacataaacttatataagtactaaaatcaattgatatgataatagcttaattttttttagataatggattatattaaacccggcctctacaccttgcgagggtgtacacagccaaaataatagtttaattagagaagagaaaaataatattaaccaagtgaggatgaacttacataggtgcataagatattataataaataatgaagatatatattgaaatattatgtgaattatgtgtgataataatttaacatgcctttattttaaaagctctaaaatgtaataaattttaaattatagataatatagcatgtttgtatgatattaaatgtattgattgttaatagatgatgatgtgtcaacttgttagtgaatgatgatgtggcatctttgcatgttaaggtttaggagttagtgggttataactttatagtaagataggatatgtaagatgtatccgttttagtttctgcccagggaggtgcattcattccgctttctcttggttcagatgcatggcaaggcgctcctgaaagcgcggataaacatgcaccactgcaagcagaggcagtgacaccgaaaagtaccactgatatttcgagtagcagtggtggcaaaacaggccggtccggggcatgggagaacttacgtatcactgaattggaaaatggaaagcctttgaaggcaagatgtgttcgtaacactgtgctcgagtgtggttctcacacagggacgtcggttttgcgtaatcacctctatagcatcagttgtaagaacaagcgtcgagcaagctacccaaacctatcgaggtaggatttatgttcttttcttcttcttgtttttacccggcactatttttaactaatgtaacatacttgcatggttcatcacttcagcagcgattgtgtgatccttcttttttttttcctttttaattttgcagtacttctgacaccacagcaaatagcaccattcctgatgagtcaacacacaacaatgcagtcgattcacacccgtggaacaacaatgcagtcgattcacgcccttggaacaaggctcaatgttctagcaggatacagcaaataactggtgggttacaacttgccatcggggctgttagtgaggttcttaagctacatggaaaggaccttgatggaaactcaaatcatcgtacaagtacaacaacgaccctgatccgaacgtcaagccttagcccacacaaaatttatggaagacacgcggagaagaatgccatcctgaagattattacagatgacagttacgatggagtaactgtactgcccattgtaggcattgcaggagttgggaagacagctcttgctcaacttgtatacaatgatccaatggtgaaacgtaactttgatcaggtatgggtttgggtatctaaagactacgatgaagtgatgctcacgatggagattctagattttgtctctcaagaaagacatgaaatatctcatcaaagaaaagaaagacacaacggaataagtagctttgccaaacttcaggagatcttgaatgggcatatggacatccggacgaaaaaattcctgcttgttttggatgacgtatgggatagcatggatggtaacacatggaacatcctattagctccattgaaatcaaatcgtgcaaaagggaatatgatacttgtgacaactagaaatttgtctcttgcacaacgggtggggacagtcgaaccgattgagttaggtcctctgtcaaatgaggatttttggttattttttaaagcatgcgcatttggtgatgaaaattataaagcacatccaagtctaaacatcattgggcagaaaatagctgaaaagttaaatggtaacccattggcagcagaaacaacagggcgaatattaagaaagcatgttacaattgatcactggagcaacactctgaggggcgaagattggaaatccctgaatataagtagaggaatcatgccttctttgaagcttagctatgatcagctgccttaccatttacaacaatgtttcttgtattgttcaatattccctagtggttattgcttccttggacaggagttgatccatatttggatttctcaaggttttgtgcatcgtaactcttcaagtaagagactggaagagatcgggagggagtacctttctaatttggtaaactccggcttctttcagccaggtgcacagacaaatcagttcactcaagttgacaagacatcctatgttatgtgtgggcttattcatgattttgcaaggatggtttcgagaacagagtacgcaactatagataatccacagtgcaataaaatgttgccaactatacgtcacttgtcaatattaaccgattctacacaccaagaagatcgtgattgtggcaaggttgaagaaagaattagaaatgcagttaaaccagtgaaacatttgagaactttggtgctaattgggcagcataaccatatattcctcaaatccttcaaggatatagtccagaaggaacatcatctacgtgtcttgcaaatctctgcaccatttactgatattgacccctcgttattgaatctggtgaatcctacccatattcgctatataaagtttgatgacggagctttgcctctatctgtcggcaagttttatcatctccaagtatttgatgctggttcagaatctgatcttattatacctaatgatatggataacctcgttagcctgaggcatcttgtagcagcaaagcaagtgttctcgtccatcactagcattggcaaaatgacctctcttcaggaattaaatgactttagtgttcataattctttgggcttgaaccaactacagtccttgaaccaacttgtacagctcggtgtgtctggacttgaaactattacgactagaatcgaagcttgtggtgcaagactaagagacaaacataatttagaaaagctacatttgtcctcgaaggatgcaaaggatggatatgacagtggcatgagctctgaaaatgagtatgacacagtcatgagttttgaaaatgaaactgacagtggcatagaacctctgatggagggactgacgatggctgatacaaatatatccccagttttaaaaaatttgccaggcatagcacgtgaggtgcttgatggtcttgaaccacatcacagtctcaagcatctacggatatctgggtataatggagctacctccccaacttggtttccgtcttcacttacctgtctgcaaacacttcacctagaaaaatgtggaaaatggcaaagacttcctttagaaaggctaacgttacttagaaagcttgtgttgatcaaaatgaggaatgcaacagaagtctcaattccatcagtggaggagcttgtattaactgaattgataagcttgaaggcatgctcctgcacttccatcaggaacttgaatgacaatttaaaggttttgaagattaagagttgccctgcactggaggtctttccattgtttgagaactacccgcaatttgagattgagcagtcgtcatggttttcccgtctaagggagattaccatctatggttgccctcatttgcgtgtgcacaaacctcttccgccttcacctaatgtcgagaaattatccatcacccgagtttcaacacttccatcaatcgaggggtcatctagtggaacattaagaatcggattttcatatgattggatggatgaatgggatgaatcttctgatcagatgataacgttggatgacaaagttatggcgttccgtaacttgaggttcttaagtggattggtaatatgtggttgtcaaaatcttacgactatatcattggacagtttaagacaactcaggtctttgaagagtttggaaatatccaactgcctagaacttttcgctccaaatgtcccatcagatacccgtgaagacatggcagctgcagatcacaacaccctcctatgtcttaaacttctcgatattagaaattgtggaataacagggaagtggctatctctgttgctacaacacatgaagaccctacaagagttgaggttacaagactgcgagcagataacaggtctatctataggagaggaagaatgtggtcaaccaaatcttatgtcagctacggagactccatcattgggattttccgctgaaaacaaacttccacgccttccgttaaatatcatatgctctctgaagaagatatatatcaaatggtgctctgatttaacatttcatgggagcaaggatggtttggctggatttacctcccttgagcagctagagatttcggtatgccccaagctcatcgattccttattgcataacgatggaaatgttgagcaggcgaatagaagatggctcctccctatatcccttgaagaacttattgtacaatatgatggtccctttgaaatgcttcaactctgctttccagggaacctcacccgcctgaaaaaactgtttctaatgagagaggtaagtttgacatctctgcagttacattcctgcacagcactccaagagctgacaattccttgtgcgcgcttacaaattactagtaattctctggaaggcttgcaatcgcttaattctctggaaggcttgcaatcgctcggcaacctaaggctgctgcaggtaaagggccttagagctcacatgggttacctccttccacaatcacttgaggaactttgcatcaacaactgttttattgaaaccctgtgcccccgctttcaaatgaatctcacctgcctaaaaaaattagaggtgcaccactctgaatttttgatatctctagagctgcaatcatgcacggcactcgaagagttgacgattgaatattgtaaatcactcgccgtactggagggcttgcaattcctctatggcctcaggagtttgcaagtacacgaatgccccagattgcctccatgtttggataatttgtcatggcaaggccatctgcgactagaaaagttgtgcatcgatgatacctctatccttaccacgtcattctgcaagcacctcacttcccttgaatacctaaagatttacagttgcagaagcgaagaggggagactaacggatgagcaagagagagcgctccagctcctcacgaccctgcaagagctccgctttacgcattgctactctcttcaagatcttcctgcaggtctgcacagccttcactccctcaagaggttggacatctggggttgctatcgcatcaggaagctgccagaaaagggtctcccaccttcgctggaagaactggatatctcttgttgcaccaaagagctagctgaccagtgcagaacgctaggaagcaagctgaaggtcaaaatcaatgggagtcttgtgtcttcataa
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| CDS seq | atggcagaggtggaagtcactttgctggagggcgggatcgagtggctggcgcagaccatcctggagaacctggaaagcgacaagctggacgagtggattcgtcaggttgggctctctgatgccaccgagaagcttaagtcagagatggagagggtggaagtggtggtcgctgccgttaggcagagagcaatcgggaacaagctgacccgatcgctcggtcgtctcagggagctgctctacgacgccgacaatgccgtcgatgagctcgactactacaggctccagcaccaggtccaaggaggtaatataagcgtccgtacgcatgtaagatgtacatcacctctttcgtctgttggttcaaatgcatggcaacaaagcgctcctgaaagcgcgcataaacatgcaccagtgcaagcagatcaggtagtgagaccgaaatttaccactgatatttcgagaagcagtggacggcctggtggcaaaagacggtccaaggtatggaagtactttgatggcactaaatatgaaaataaaaaggctgtgaaatgtattttctgtaacactgagctcaagtgtcaaaatggggcgtcgggtttgcatattcacctccgtagcaagcgttgtacggataagcgtaaagacctatcgagcgcggataaacatgcaccactgcaagcagaggcagtgacaccgaaaagtaccactgatatttcgagtagcagtggtggcaaaacaggccggtccggggcatgggagaacttacgtatcactgaattggaaaatggaaagcctttgaaggcaagatgtgttcgtaacactgtgctcgagtgtggttctcacacagggacgtcggttttgcgtaatcacctctatagcatcagttgtaagaacaagcgtcgagcaagctacccaaacctatcgagtacttctgacaccacagcaaatagcaccattcctgatgagtcaacacacaacaatgcagtcgattcacacccgtggaacaacaatgcagtcgattcacgcccttggaacaaggctcaatgttctagcaggatacagcaaataactggtgggttacaacttgccatcggggctgttagtgaggttcttaagctacatggaaaggaccttgatggaaactcaaatcatcgtacaagtacaacaacgaccctgatccgaacgtcaagccttagcccacacaaaatttatggaagacacgcggagaagaatgccatcctgaagattattacagatgacagttacgatggagtaactgtactgcccattgtaggcattgcaggagttgggaagacagctcttgctcaacttgtatacaatgatccaatggtgaaacgtaactttgatcaggtatgggtttgggtatctaaagactacgatgaagtgatgctcacgatggagattctagattttgtctctcaagaaagacatgaaatatctcatcaaagaaaagaaagacacaacggaataagtagctttgccaaacttcaggagatcttgaatgggcatatggacatccggacgaaaaaattcctgcttgttttggatgacgtatgggatagcatggatggtaacacatggaacatcctattagctccattgaaatcaaatcgtgcaaaagggaatatgatacttgtgacaactagaaatttgtctcttgcacaacgggtggggacagtcgaaccgattgagttaggtcctctgtcaaatgaggatttttggttattttttaaagcatgcgcatttggtgatgaaaattataaagcacatccaagtctaaacatcattgggcagaaaatagctgaaaagttaaatggtaacccattggcagcagaaacaacagggcgaatattaagaaagcatgttacaattgatcactggagcaacactctgaggggcgaagattggaaatccctgaatataagtagaggaatcatgccttctttgaagcttagctatgatcagctgccttaccatttacaacaatgtttcttgtattgttcaatattccctagtggttattgcttccttggacaggagttgatccatatttggatttctcaaggttttgtgcatcgtaactcttcaagtaagagactggaagagatcgggagggagtacctttctaatttggtaaactccggcttctttcagccaggtgcacagacaaatcagttcactcaagttgacaagacatcctatgttatgtgtgggcttattcatgattttgcaaggatggtttcgagaacagagtacgcaactatagataatccacagtgcaataaaatgttgccaactatacgtcacttgtcaatattaaccgattctacacaccaagaagatcgtgattgtggcaaggttgaagaaagaattagaaatgcagttaaaccagtgaaacatttgagaactttggtgctaattgggcagcataaccatatattcctcaaatccttcaaggatatagtccagaaggaacatcatctacgtgtcttgcaaatctctgcaccatttactgatattgacccctcgttattgaatctggtgaatcctacccatattcgctatataaagtttgatgacggagctttgcctctatctgtcggcaagttttatcatctccaagtatttgatgctggttcagaatctgatcttattatacctaatgatatggataacctcgttagcctgaggcatcttgtagcagcaaagcaagtgttctcgtccatcactagcattggcaaaatgacctctcttcaggaattaaatgactttagtgttcataattctttgggcttgaaccaactacagtccttgaaccaacttgtacagctcggtgtgtctggacttgaaactattacgactagaatcgaagcttgtggtgcaagactaagagacaaacataatttagaaaagctacatttgtcctcgaaggatgcaaaggatggatatgacagtggcatgagctctgaaaatgagtatgacacagtcatgagttttgaaaatgaaactgacagtggcatagaacctctgatggagggactgacgatggctgatacaaatatatccccagttttaaaaaatttgccaggcatagcacgtgaggtgcttgatggtcttgaaccacatcacagtctcaagcatctacggatatctgggtataatggagctacctccccaacttggtttccgtcttcacttacctgtctgcaaacacttcacctagaaaaatgtggaaaatggcaaagacttcctttagaaaggctaacgttacttagaaagcttgtgttgatcaaaatgaggaatgcaacagaagtctcaattccatcagtggaggagcttgtattaactgaattgataagcttgaaggcatgctcctgcacttccatcaggaacttgaatgacaatttaaaggttttgaagattaagagttgccctgcactggaggtctttccattgtttgagaactacccgcaatttgagattgagcagtcgtcatggttttcccgtctaagggagattaccatctatggttgccctcatttgcgtgtgcacaaacctcttccgccttcacctaatgtcgagaaattatccatcacccgagtttcaacacttccatcaatcgaggggtcatctagtggaacattaagaatcggattttcatatgattggatggatgaatgggatgaatcttctgatcagatgataacgttggatgacaaagttatggcgttccgtaacttgaggttcttaagtggattggtaatatgtggttgtcaaaatcttacgactatatcattggacagtttaagacaactcaggtctttgaagagtttggaaatatccaactgcctagaacttttcgctccaaatgtcccatcagatacccgtgaagacatggcagctgcagatcacaacaccctcctatgtcttaaacttctcgatattagaaattgtggaataacagggaagtggctatctctgttgctacaacacatgaagaccctacaagagttgaggttacaagactgcgagcagataacaggtctatctataggagaggaagaatgtggtcaaccaaatcttatgtcagctacggagactccatcattgggattttccgctgaaaacaaacttccacgccttccgttaaatatcatatgctctctgaagaagatatatatcaaatggtgctctgatttaacatttcatgggagcaaggatggtttggctggatttacctcccttgagcagctagagatttcggtatgccccaagctcatcgattccttattgcataacgatggaaatgttgagcaggcgaatagaagatggctcctccctatatcccttgaagaacttattgtacaatatgatggtccctttgaaatgcttcaactctgctttccagggaacctcacccgcctgaaaaaactgtttctaatgagagaggtaagtttgacatctctgcagttacattcctgcacagcactccaagagctgacaattccttgtgcgcgcttacaaattactagtaattctctggaaggcttgcaatcgcttaattctctggaaggcttgcaatcgctcggcaacctaaggctgctgcaggtaaagggccttagagctcacatgggttacctccttccacaatcacttgaggaactttgcatcaacaactgttttattgaaaccctgtgcccccgctttcaaatgaatctcacctgcctaaaaaaattagaggtgcaccactctgaatttttgatatctctagagctgcaatcatgcacggcactcgaagagttgacgattgaatattgtaaatcactcgccgtactggagggcttgcaattcctctatggcctcaggagtttgcaagtacacgaatgccccagattgcctccatgtttggataatttgtcatggcaaggccatctgcgactagaaaagttgtgcatcgatgatacctctatccttaccacgtcattctgcaagcacctcacttcccttgaatacctaaagatttacagttgcagaagcgaagaggggagactaacggatgagcaagagagagcgctccagctcctcacgaccctgcaagagctccgctttacgcattgctactctcttcaagatcttcctgcaggtctgcacagccttcactccctcaagaggttggacatctggggttgctatcgcatcaggaagctgccagaaaagggtctcccaccttcgctggaagaactggatatctcttgttgcaccaaagagctagctgaccagtgcagaacgctaggaagcaagctgaaggtcaaaatcaatgggagtcttgtgtcttcataa
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| Protein seq | MAEVEVTLLEGGIEWLAQTILENLESDKLDEWIRQVGLSDATEKLKSEMERVEVVVAAVRQRAIGNKLTRSLGRLRELLYDADNAVDELDYYRLQHQVQGGNISVRTHVRCTSPLSSVGSNAWQQSAPESAHKHAPVQADQVVRPKFTTDISRSSGRPGGKRRSKVWKYFDGTKYENKKAVKCIFCNTELKCQNGASGLHIHLRSKRCTDKRKDLSSADKHAPLQAEAVTPKSTTDISSSSGGKTGRSGAWENLRITELENGKPLKARCVRNTVLECGSHTGTSVLRNHLYSISCKNKRRASYPNLSSTSDTTANSTIPDESTHNNAVDSHPWNNNAVDSRPWNKAQCSSRIQQITGGLQLAIGAVSEVLKLHGKDLDGNSNHRTSTTTTLIRTSSLSPHKIYGRHAEKNAILKIITDDSYDGVTVLPIVGIAGVGKTALAQLVYNDPMVKRNFDQVWVWVSKDYDEVMLTMEILDFVSQERHEISHQRKERHNGISSFAKLQEILNGHMDIRTKKFLLVLDDVWDSMDGNTWNILLAPLKSNRAKGNMILVTTRNLSLAQRVGTVEPIELGPLSNEDFWLFFKACAFGDENYKAHPSLNIIGQKIAEKLNGNPLAAETTGRILRKHVTIDHWSNTLRGEDWKSLNISRGIMPSLKLSYDQLPYHLQQCFLYCSIFPSGYCFLGQELIHIWISQGFVHRNSSSKRLEEIGREYLSNLVNSGFFQPGAQTNQFTQVDKTSYVMCGLIHDFARMVSRTEYATIDNPQCNKMLPTIRHLSILTDSTHQEDRDCGKVEERIRNAVKPVKHLRTLVLIGQHNHIFLKSFKDIVQKEHHLRVLQISAPFTDIDPSLLNLVNPTHIRYIKFDDGALPLSVGKFYHLQVFDAGSESDLIIPNDMDNLVSLRHLVAAKQVFSSITSIGKMTSLQELNDFSVHNSLGLNQLQSLNQLVQLGVSGLETITTRIEACGARLRDKHNLEKLHLSSKDAKDGYDSGMSSENEYDTVMSFENETDSGIEPLMEGLTMADTNISPVLKNLPGIAREVLDGLEPHHSLKHLRISGYNGATSPTWFPSSLTCLQTLHLEKCGKWQRLPLERLTLLRKLVLIKMRNATEVSIPSVEELVLTELISLKACSCTSIRNLNDNLKVLKIKSCPALEVFPLFENYPQFEIEQSSWFSRLREITIYGCPHLRVHKPLPPSPNVEKLSITRVSTLPSIEGSSSGTLRIGFSYDWMDEWDESSDQMITLDDKVMAFRNLRFLSGLVICGCQNLTTISLDSLRQLRSLKSLEISNCLELFAPNVPSDTREDMAAADHNTLLCLKLLDIRNCGITGKWLSLLLQHMKTLQELRLQDCEQITGLSIGEEECGQPNLMSATETPSLGFSAENKLPRLPLNIICSLKKIYIKWCSDLTFHGSKDGLAGFTSLEQLEISVCPKLIDSLLHNDGNVEQANRRWLLPISLEELIVQYDGPFEMLQLCFPGNLTRLKKLFLMREVSLTSLQLHSCTALQELTIPCARLQITSNSLEGLQSLNSLEGLQSLGNLRLLQVKGLRAHMGYLLPQSLEELCINNCFIETLCPRFQMNLTCLKKLEVHHSEFLISLELQSCTALEELTIEYCKSLAVLEGLQFLYGLRSLQVHECPRLPPCLDNLSWQGHLRLEKLCIDDTSILTTSFCKHLTSLEYLKIYSCRSEEGRLTDEQERALQLLTTLQELRFTHCYSLQDLPAGLHSLHSLKRLDIWGCYRIRKLPEKGLPPSLEELDISCCTKELADQCRTLGSKLKVKINGSLVSS |
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| Function | Putative disease resistance protein RGA1 [UniProtKB/Swiss-Prot:Q7XA42] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0007820 | OsPr106_11g0007820.01 | Chr11 | 6684229 | 6690547 | + | NAM | ||
| CDS seq | atggcagaggtggaagtcactttgctggagggcgggatcgagtggctggcgcagaccatcctggagaacctggaaagcgacaagctggacgagtggattcgtcaggttgggctctctgatgccaccgagaagcttaagtcagagatggagagggtggaagtggtggtcgctgccgttaggcagagagcaatcgggaacaagctgacccgatcgctcggtcgtctcagggagctgctctacgacgccgacaatgccgtcgatgagctcgactactacaggctccagcaccaggtccaaggaggtaatataagcgtccgtacgcatgtaagatgtacatcacctctttcgtctgttggttcaaatgcatggcaacaaagcgctcctgaaagcgcgcataaacatgcaccagtgcaagcagatcaggtagtgagaccgaaatttaccactgatatttcgagaagcagtggacggcctggtggcaaaagacggtccaaggtatggaagtactttgatggcactaaatatgaaaataaaaaggctgtgaaatgtattttctgtaacactgagctcaagtgtcaaaatggggcgtcgggtttgcatattcacctccgtagcaagcgttgtacggataagcgtaaagacctatcgagcgcggataaacatgcaccactgcaagcagaggcagtgacaccgaaaagtaccactgatatttcgagtagcagtggtggcaaaacaggccggtccggggcatgggagaacttacgtatcactgaattggaaaatggaaagcctttgaaggcaagatgtgttcgtaacactgtgctcgagtgtggttctcacacagggacgtcggttttgcgtaatcacctctatagcatcagttgtaagaacaagcgtcgagcaagctacccaaacctatcgagtacttctgacaccacagcaaatagcaccattcctgatgagtcaacacacaacaatgcagtcgattcacacccgtggaacaacaatgcagtcgattcacgcccttggaacaaggctcaatgttctagcaggatacagcaaataactggtgggttacaacttgccatcggggctgttagtgaggttcttaagctacatggaaaggaccttgatggaaactcaaatcatcgtacaagtacaacaacgaccctgatccgaacgtcaagccttagcccacacaaaatttatggaagacacgcggagaagaatgccatcctgaagattattacagatgacagttacgatggagtaactgtactgcccattgtaggcattgcaggagttgggaagacagctcttgctcaacttgtatacaatgatccaatggtgaaacgtaactttgatcaggtatgggtttgggtatctaaagactacgatgaagtgatgctcacgatggagattctagattttgtctctcaagaaagacatgaaatatctcatcaaagaaaagaaagacacaacggaataagtagctttgccaaacttcaggagatcttgaatgggcatatggacatccggacgaaaaaattcctgcttgttttggatgacgtatgggatagcatggatggtaacacatggaacatcctattagctccattgaaatcaaatcgtgcaaaagggaatatgatacttgtgacaactagaaatttgtctcttgcacaacgggtggggacagtcgaaccgattgagttaggtcctctgtcaaatgaggatttttggttattttttaaagcatgcgcatttggtgatgaaaattataaagcacatccaagtctaaacatcattgggcagaaaatagctgaaaagttaaatggtaacccattggcagcagaaacaacagggcgaatattaagaaagcatgttacaattgatcactggagcaacactctgaggggcgaagattggaaatccctgaatataagtagaggaatcatgccttctttgaagcttagctatgatcagctgccttaccatttacaacaatgtttcttgtattgttcaatattccctagtggttattgcttccttggacaggagttgatccatatttggatttctcaaggttttgtgcatcgtaactcttcaagtaagagactggaagagatcgggagggagtacctttctaatttggtaaactccggcttctttcagccaggtgcacagacaaatcagttcactcaagttgacaagacatcctatgttatgtgtgggcttattcatgattttgcaaggatggtttcgagaacagagtacgcaactatagataatccacagtgcaataaaatgttgccaactatacgtcacttgtcaatattaaccgattctacacaccaagaagatcgtgattgtggcaaggttgaagaaagaattagaaatgcagttaaaccagtgaaacatttgagaactttggtgctaattgggcagcataaccatatattcctcaaatccttcaaggatatagtccagaaggaacatcatctacgtgtcttgcaaatctctgcaccatttactgatattgacccctcgttattgaatctggtgaatcctacccatattcgctatataaagtttgatgacggagctttgcctctatctgtcggcaagttttatcatctccaagtatttgatgctggttcagaatctgatcttattatacctaatgatatggataacctcgttagcctgaggcatcttgtagcagcaaagcaagtgttctcgtccatcactagcattggcaaaatgacctctcttcaggaattaaatgactttagtgttcataattctttgggcttgaaccaactacagtccttgaaccaacttgtacagctcggtgtgtctggacttgaaactattacgactagaatcgaagcttgtggtgcaagactaagagacaaacataatttagaaaagctacatttgtcctcgaaggatgcaaaggatggatatgacagtggcatgagctctgaaaatgagtatgacacagtcatgagttttgaaaatgaaactgacagtggcatagaacctctgatggagggactgacgatggctgatacaaatatatccccagttttaaaaaatttgccaggcatagcacgtgaggtgcttgatggtcttgaaccacatcacagtctcaagcatctacggatatctgggtataatggagctacctccccaacttggtttccgtcttcacttacctgtctgcaaacacttcacctagaaaaatgtggaaaatggcaaagacttcctttagaaaggctaacgttacttagaaagcttgtgttgatcaaaatgaggaatgcaacagaagtctcaattccatcagtggaggagcttgtattaactgaattgataagcttgaaggcatgctcctgcacttccatcaggaacttgaatgacaatttaaaggttttgaagattaagagttgccctgcactggaggtctttccattgtttgagaactacccgcaatttgagattgagcagtcgtcatggttttcccgtctaagggagattaccatctatggttgccctcatttgcgtgtgcacaaacctcttccgccttcacctaatgtcgagaaattatccatcacccgagtttcaacacttccatcaatcgaggggtcatctagtggaacattaagaatcggattttcatatgattggatggatgaatgggatgaatcttctgatcagatgataacgttggatgacaaagttatggcgttccgtaacttgaggttcttaagtggattggtaatatgtggttgtcaaaatcttacgactatatcattggacagtttaagacaactcaggtctttgaagagtttggaaatatccaactgcctagaacttttcgctccaaatgtcccatcagatacccgtgaagacatggcagctgcagatcacaacaccctcctatgtcttaaacttctcgatattagaaattgtggaataacagggaagtggctatctctgttgctacaacacatgaagaccctacaagagttgaggttacaagactgcgagcagataacaggtctatctataggagaggaagaatgtggtcaaccaaatcttatgtcagctacggagactccatcattgggattttccgctgaaaacaaacttccacgccttccgttaaatatcatatgctctctgaagaagatatatatcaaatggtgctctgatttaacatttcatgggagcaaggatggtttggctggatttacctcccttgagcagctagagatttcggtatgccccaagctcatcgattccttattgcataacgatggaaatgttgagcaggcgaatagaagatggctcctccctatatcccttgaagaacttattgtacaatatgatggtccctttgaaatgcttcaactctgctttccagggaacctcacccgcctgaaaaaactgtttctaatgagagaggtaagtttgacatctctgcagttacattcctgcacagcactccaagagctgacaattccttgtgcgcgcttacaaattactagtaattctctggaaggcttgcaatcgcttaattctctggaaggcttgcaatcgctcggcaacctaaggctgctgcaggtaaagggccttagagctcacatgggttacctccttccacaatcacttgaggaactttgcatcaacaactgttttattgaaaccctgtgcccccgctttcaaatgaatctcacctgcctaaaaaaattagaggtgcaccactctgaatttttgatatctctagagctgcaatcatgcacggcactcgaagagttgacgattgaatattgtaaatcactcgccgtactggagggcttgcaattcctctatggcctcaggagtttgcaagtacacgaatgccccagattgcctccatgtttggataatttgtcatggcaaggccatctgcgactagaaaagttgtgcatcgatgatacctctatccttaccacgtcattctgcaagcacctcacttcccttgaatacctaaagatttacagttgcagaagcgaagaggggagactaacggatgagcaagagagagcgctccagctcctcacgaccctgcaagagctccgctttacgcattgctactctcttcaagatcttcctgcaggtctgcacagccttcactccctcaagaggttggacatctggggttgctatcgcatcaggaagctgccagaaaagggtctcccaccttcgctggaagaactggatatctcttgttgcaccaaagagctagctgaccagtgcagaacgctaggaagcaagctgaaggtcaaaatcaatgggagtcttgtgtcttcataa
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| Protein seq | MAEVEVTLLEGGIEWLAQTILENLESDKLDEWIRQVGLSDATEKLKSEMERVEVVVAAVRQRAIGNKLTRSLGRLRELLYDADNAVDELDYYRLQHQVQGGNISVRTHVRCTSPLSSVGSNAWQQSAPESAHKHAPVQADQVVRPKFTTDISRSSGRPGGKRRSKVWKYFDGTKYENKKAVKCIFCNTELKCQNGASGLHIHLRSKRCTDKRKDLSSADKHAPLQAEAVTPKSTTDISSSSGGKTGRSGAWENLRITELENGKPLKARCVRNTVLECGSHTGTSVLRNHLYSISCKNKRRASYPNLSSTSDTTANSTIPDESTHNNAVDSHPWNNNAVDSRPWNKAQCSSRIQQITGGLQLAIGAVSEVLKLHGKDLDGNSNHRTSTTTTLIRTSSLSPHKIYGRHAEKNAILKIITDDSYDGVTVLPIVGIAGVGKTALAQLVYNDPMVKRNFDQVWVWVSKDYDEVMLTMEILDFVSQERHEISHQRKERHNGISSFAKLQEILNGHMDIRTKKFLLVLDDVWDSMDGNTWNILLAPLKSNRAKGNMILVTTRNLSLAQRVGTVEPIELGPLSNEDFWLFFKACAFGDENYKAHPSLNIIGQKIAEKLNGNPLAAETTGRILRKHVTIDHWSNTLRGEDWKSLNISRGIMPSLKLSYDQLPYHLQQCFLYCSIFPSGYCFLGQELIHIWISQGFVHRNSSSKRLEEIGREYLSNLVNSGFFQPGAQTNQFTQVDKTSYVMCGLIHDFARMVSRTEYATIDNPQCNKMLPTIRHLSILTDSTHQEDRDCGKVEERIRNAVKPVKHLRTLVLIGQHNHIFLKSFKDIVQKEHHLRVLQISAPFTDIDPSLLNLVNPTHIRYIKFDDGALPLSVGKFYHLQVFDAGSESDLIIPNDMDNLVSLRHLVAAKQVFSSITSIGKMTSLQELNDFSVHNSLGLNQLQSLNQLVQLGVSGLETITTRIEACGARLRDKHNLEKLHLSSKDAKDGYDSGMSSENEYDTVMSFENETDSGIEPLMEGLTMADTNISPVLKNLPGIAREVLDGLEPHHSLKHLRISGYNGATSPTWFPSSLTCLQTLHLEKCGKWQRLPLERLTLLRKLVLIKMRNATEVSIPSVEELVLTELISLKACSCTSIRNLNDNLKVLKIKSCPALEVFPLFENYPQFEIEQSSWFSRLREITIYGCPHLRVHKPLPPSPNVEKLSITRVSTLPSIEGSSSGTLRIGFSYDWMDEWDESSDQMITLDDKVMAFRNLRFLSGLVICGCQNLTTISLDSLRQLRSLKSLEISNCLELFAPNVPSDTREDMAAADHNTLLCLKLLDIRNCGITGKWLSLLLQHMKTLQELRLQDCEQITGLSIGEEECGQPNLMSATETPSLGFSAENKLPRLPLNIICSLKKIYIKWCSDLTFHGSKDGLAGFTSLEQLEISVCPKLIDSLLHNDGNVEQANRRWLLPISLEELIVQYDGPFEMLQLCFPGNLTRLKKLFLMREVSLTSLQLHSCTALQELTIPCARLQITSNSLEGLQSLNSLEGLQSLGNLRLLQVKGLRAHMGYLLPQSLEELCINNCFIETLCPRFQMNLTCLKKLEVHHSEFLISLELQSCTALEELTIEYCKSLAVLEGLQFLYGLRSLQVHECPRLPPCLDNLSWQGHLRLEKLCIDDTSILTTSFCKHLTSLEYLKIYSCRSEEGRLTDEQERALQLLTTLQELRFTHCYSLQDLPAGLHSLHSLKRLDIWGCYRIRKLPEKGLPPSLEELDISCCTKELADQCRTLGSKLKVKINGSLVSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0492900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10770 | SBH | 1.124987 | 1.032293 | 0.597353 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0492900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008070 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0009680 | SBH | 0.145431 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0009680 | SBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0009510 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007930 | SBH | 11.121528 | 1.201072 | 13.343512 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0105200 | RBH | 0.0044755 | 0.0344415 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007830 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0101000 | SBH | 2.1805425 | 55.4515915 | 2.8706485 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_Ung0000490 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0010380 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0014010 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023010 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007940 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G009780 | SBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
