Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_11g0010380 | OGI:11027460 | 1/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr11:10646609-10647098 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGACAATTGAGAGGATCTTCTCAACAAGTTTTGATGACCTCCCGCATGACCTCAAATCATGCTTCCTCTACTTTGCTGCTTACCCTACAAATATCACTCACCCTGTGGATCAGATAATGCGCATGTGGATAGCCGAGGGCTTCATCAAGCCAGAAAAGGGCAAGAACATGGAGGACCTAGCCCAAGAATATCTCAAGGAGCTTATTTCAAGGTTCCTAGTTGAGGTTAAATATAGGAATGAATGCGAAAAGATTGAGTTAGTGCAGGTTCACAATCGACTTCTACGGTTCCTGCAATCAGAGGCTCGTGAAGCTAGCTTCATTGAGATTCATGATAACACTGATGTTCTTGCACCAGCAGCAGTGCGCCGCCTTTCCATTCAGAATGACAGTGGAAACTATATTCCTTTTGGAAACAGATTCCCCAAGCTGCGTTCCTTCATATGTCGTGTCGAAGAGGGAGAAGGTGCCAGCGCTACACCGGACCTGA
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| CDS seq | ATGACAATTGAGAGGATCTTCTCAACAAGTTTTGATGACCTCCCGCATGACCTCAAATCATGCTTCCTCTACTTTGCTGCTTACCCTACAAATATCACTCACCCTGTGGATCAGATAATGCGCATGTGGATAGCCGAGGGCTTCATCAAGCCAGAAAAGGGCAAGAACATGGAGGACCTAGCCCAAGAATATCTCAAGGAGCTTATTTCAAGGTTCACAATCGACTTCTACGGTTCCTGCAATCAGAGGCTCGTGAAGCTAGCTTCATTGAGATTCATGATAACACTGATGTTCTTGCACCAGCAGCAGTGCGCCGCCTTTCCATTCAGAATGACAGTGGAAACTATATTCCTTTTGGAAACAGATTCCCCAAGCTGCGTTCCTTCATATGTCGTGTCGAAGAGGGAGAAGGTGCCAGCGCTACACCGGACCTGA
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| Protein seq | MTIERIFSTSFDDLPHDLKSCFLYFAAYPTNITHPVDQIMRMWIAEGFIKPEKGKNMEDLAQEYLKELISRFTIDFYGSCNQRLVKLASLRFMITLMFLHQQQCAAFPFRMTVETIFLLETDSPSCVPSYVVSKREKVPALHRT |
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| Function | Putative late blight resistance protein homolog R1B-19 [UniProtKB/Swiss-Prot:Q6L406] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_11g0010380 | OsKYG_11g0010380.01 | Chr11 | 10646609 | 10647098 | + | NAM | ||
| CDS seq | ATGACAATTGAGAGGATCTTCTCAACAAGTTTTGATGACCTCCCGCATGACCTCAAATCATGCTTCCTCTACTTTGCTGCTTACCCTACAAATATCACTCACCCTGTGGATCAGATAATGCGCATGTGGATAGCCGAGGGCTTCATCAAGCCAGAAAAGGGCAAGAACATGGAGGACCTAGCCCAAGAATATCTCAAGGAGCTTATTTCAAGGTTCACAATCGACTTCTACGGTTCCTGCAATCAGAGGCTCGTGAAGCTAGCTTCATTGAGATTCATGATAACACTGATGTTCTTGCACCAGCAGCAGTGCGCCGCCTTTCCATTCAGAATGACAGTGGAAACTATATTCCTTTTGGAAACAGATTCCCCAAGCTGCGTTCCTTCATATGTCGTGTCGAAGAGGGAGAAGGTGCCAGCGCTACACCGGACCTGA
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| Protein seq | MTIERIFSTSFDDLPHDLKSCFLYFAAYPTNITHPVDQIMRMWIAEGFIKPEKGKNMEDLAQEYLKELISRFTIDFYGSCNQRLVKLASLRFMITLMFLHQQQCAAFPFRMTVETIFLLETDSPSCVPSYVVSKREKVPALHRT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0270500 | SBH | 0.259530 | 0.313682 | 0.213093 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g17014 | SBH | 0.366653 | 0.204315 | 0.106421 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0270500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0010180 | SBH | 0.0 | 14.174929 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0010070 | SBH | 0.000000 | 0.373145 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0010070 | SBH | 0.000000 | 0.000000 | 0.229735 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0010030 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0010050 | SBH | 0.374941 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0146300 | SBH | 0.614725 | 2.2575735 | 0.3481675 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0010060 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0136200 | SBH | 0 | 0 | 0.009659 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0010170 | SBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0010030 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0009910 | SBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0010060 | SBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G010170 | SBH | 0.000000 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0009940 | SBH | 0.000000 | 0.000000 | 0.000000 |
