Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_11g0006370 | OGI:11015710 | 11/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr11:5219293-5220449 | ||||||||
| Gene Symbol | OsFbox577, Os_F0135, OsFbox587, Os_F0097 | ||||||||||
| DNA seq | ttagcaaaatattttcctcactgcatggtcatatttttttatatattttaacaaaatgcagaatagaagcatgaggaatggtatggttaactcacatctagcactcatataaacttggagtggtgtgacataggtactcaagatcttgaaaatcttgcgaaccctttcatcaaaaaactcataatggttgatttcaatctttttaagacggtcaaatgccaattgacccagtggcttgtaacttccagttgtttggaatgaatcttttcgtatctaaaaaagatgatatttaactaaatcaatcatggataataacttgataacacacagctatccatatgcaaaatttgtaccttagaaagatgtagagtaagcatctccagaacaggtgggtgttggagaaatagaatagtgcattgaggtcagaatccacacaccaatcgttgagtcttcaggtgagtcttcagcttgttaaatgtagggcaccagtacaaatccctattgaaaataaactaggaaaagtgtggaagaacaagataataaaaataaggaacatgttaggatctttaacaacaatatgcacacattttttagtgaatatgaatctcccctatggtcgacgacatttagaagaaaaacagaggaagtgagcaaagatgttaaatcccatatctataagtatttcccatgcttaatttagttaccaaaactataagctactgtatttttccaacagcatagcatgatcatcatttgatagactcgagtagatataagtagatgatttggaagaataaactctctgttaatgcatgcaagcaacctcttactcattgtgcatatcatcatatcttaatgcaattgtaatgatagaatgcacattactattacagaagaaacaacaaaagaactcaaacgatagcggcaattaacagaggaagcagttgcacccttaccattccaggatgagcaaacaaacacaagtttgtagtttctgacagccgctcgaccaagctgaagattttcaagccatcagacctaatataaccatagcaacccccatcagaccgaataccacaatgatcagacatacaataaaaacaccgatcatcacaaccagaacgtagcgtgacagttgccgattctagcaatggcat
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| CDS seq | atgccattgctagaatcggcaactgtcacgctacgttctggttgtgatgatcggtgtttttattgtatgtctgatcattgtggtattcggtctgatgggggttgctatggttatattaggtctgatggcttgaaaatcttcagcttggtcgagcggctgtcagaaactacaaacttgtgtttgtttgctcatcctggaatgtttattttcaatagggatttgtactggtgccctacatttaacaagctgaagactcacctgaagactcaacgattgatacgaaaagattcattccaaacaactggaagttacaagccactgggtcaattggcatttgaccgtcttaaaaagattgaaatcaaccattatgagttttttgatgaaagggttcgcaagattttcaagatcttgagtacctatgtcacaccactccaagtttatatgagtgctagatgtgagttaaccataccattcctcatgcttctattctgcattttgttaaaatatataaaaaaatatgaccatgcagtgaggaaaatattttgctaa
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| Protein seq | MPLLESATVTLRSGCDDRCFYCMSDHCGIRSDGGCYGYIRSDGLKIFSLVERLSETTNLCLFAHPGMFIFNRDLYWCPTFNKLKTHLKTQRLIRKDSFQTTGSYKPLGQLAFDRLKKIEINHYEFFDERVRKIFKILSTYVTPLQVYMSARCELTIPFLMLLFCILLKYIKKYDHAVRKIFC |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_11g0006370 | OsPr106_11g0006370.01 | Chr11 | 5219293 | 5220449 | - | NAM | ||
| CDS seq | atgccattgctagaatcggcaactgtcacgctacgttctggttgtgatgatcggtgtttttattgtatgtctgatcattgtggtattcggtctgatgggggttgctatggttatattaggtctgatggcttgaaaatcttcagcttggtcgagcggctgtcagaaactacaaacttgtgtttgtttgctcatcctggaatgtttattttcaatagggatttgtactggtgccctacatttaacaagctgaagactcacctgaagactcaacgattgatacgaaaagattcattccaaacaactggaagttacaagccactgggtcaattggcatttgaccgtcttaaaaagattgaaatcaaccattatgagttttttgatgaaagggttcgcaagattttcaagatcttgagtacctatgtcacaccactccaagtttatatgagtgctagatgtgagttaaccataccattcctcatgcttctattctgcattttgttaaaatatataaaaaaatatgaccatgcagtgaggaaaatattttgctaa
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| Protein seq | MPLLESATVTLRSGCDDRCFYCMSDHCGIRSDGGCYGYIRSDGLKIFSLVERLSETTNLCLFAHPGMFIFNRDLYWCPTFNKLKTHLKTQRLIRKDSFQTTGSYKPLGQLAFDRLKKIEINHYEFFDERVRKIFKILSTYVTPLQVYMSARCELTIPFLMLLFCILLKYIKKYDHAVRKIFC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0201900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g09510 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0201900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006510 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006490 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006530 | SBH | 0.629927 | 3.859250 | 2.320578 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006430 | SBH | 0.026985 | 0.037452 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006420 | SBH | 0.965144 | 0.399107 | 1.957737 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0083300 | SBH | 2.6366925 | 3.240256 | 2.232241 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006390 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0085700 | SBH | 5.4372965 | 2.440776 | 7.4983255 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006360 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006450 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006440 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0063690 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006470 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006470 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006270 | RBH | 0.0 | 0.0 | 0.0 |
