Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0006270 | OGI:11015710 | 11/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:5023079-5024815 | ||||||||
| Gene Symbol | OsFbox577, Os_F0135 | ||||||||||
| DNA seq | tcagaatccacacaccaatcgttgagtcttcaagtgagtcttcagcttgttaaatgtagggcaccagtacaaatccctattgaaaataaactaggaaaagtgtggaagaacaagataattaaaataaggaacatgttaggatctttaacaacaatatgcacacattttttagtgaatatgaatctccgctatggtcgacgacatttagaagaaaaacagaggaagtgagcaaagatgttaaatcccatatctataagtattttgcatgcttaatttagttaccaaaactataagctactgtatttttccaacagcatagcatgaccatcattgatagactcgagtcgataagtagatgatttggaagaataaactctctgttaatgcatgcaagcaacctcttactcattgtgcatcatatcttaatgcaattgtaatgatagaatgcacattactattacagaagaaacaaaggaactcaaacgatagcggcaattaaaagaggaagcagttgcaaccttaccattccaggatgagcaaacaaacacaagtttgtagtttctgacagccgctcgaccaggctgaagattttcaagccatcagacctattataaccgtagcaacccccataagaccgaataccacaatgatcagacatacaataaaaacaccgatcatatcacaaccagaacgtagcgtgacagttgccgattctagcaatggcatatgctctcagaaaacaattgtgccctgcctgaatgcagggttatctctaatgaacggggcaacatatactatgtacacaggccctcacgtgtacacacgtgcacaccaactAaaaaaagtcaccAaaaaaatcttaacgtcaaattcattatattttagccgtaacaaaaaaACcaaaaatctgacagttttaaggttacaattttatcagaattttatcttttttgttattctctatgtagaatgaatttgaagatgcgactttacacgtagatgtaatactattgaaagtacatgtatgaattttcctagaattttttgtgataatttttagttggtgtacatggtgtgtacacgcgagggcctgtgtgcataggatacgctcccaatgaacggagacccggcgagggcatataaatgcacatatcgcacaacacgcagtctgtgataattaggcgattcagcgatagagatgaaattcgtgcgacgatgtagcagcgattaatggacattccgagaaatcaagaattccggaggtcacactcacatgggttagctccaatgtcgtgagatgccgggagacgaaaggccggtcaggtagtagtagtaccagcagcatccgttcttggaaggagcggaggcggaggcggagcgcgcggctgatgtgctgctcgttgacggtgccggggaggtaCccggggccgggaaaccgaggtcgagcacgaaccactccagccgcgcgccgtcgtcgccgccgcggcggccgcggagtcggagcaggccgtcgaggaacacgttgaactcggtggccccccccccccccccccccccccgcggcggcggtgacgcggacgaccggggcggacctccacacgtcgcgccagcgccgggacagcacgctcgtccgcacgacctcgtgcgccgggagcgcggagaggacgcggacggcgcgtcttcgtcgtccttggcctcgcgccggcgccgcttagcccgcggtggcgaggactgcat
More
|
||||||||||
| CDS seq | atgcagtcctcgccaccgcgggctaagcggcgccggcgcgaggccaaggacgacgaagacgcgccgtccgcgtcctctccgcgctcccggcgcacgaggtcgtgcggacgagcgtgctgtcccggcgctggcgcgacgtgtggaggtccgccccggtcgtccgcgtcaccgccgccgcggggggggggggggggggggggggccaccgagttcaacgtgttcctcgacggcctgctccgactccgcggccgccgcggcggcgacgacggcgcgcggctggagtggttcgtgctcgacctcggtttcccggccccggGtacctccccggcaccgtcaacgagcagcacatcagccgcgcgctccgcctccgcctccgctccttccaagaacggatgctgctggtctgatggcttgaaaatcttcagcctggtcgagcggctgtcagaaactacaaacttgtgtttgtttgctcatcctggaatgtttattttcaatagggatttgtactggtgccctacatttaacaagctgaagactcacttgaagactcaacgattggtgtgtggattctga
More
|
||||||||||
| Protein seq | MQSSPPRAKRRRREAKDDEDAPSASSPRSRRTRSCGRACCPGAGATCGGPPRSSASPPPRGGGGGGGATEFNVFLDGLLRLRGRRGGDDGARLEWFVLDLGFPAPGTSPAPSTSSTSAARSASASAPSKNGCCWSDGLKIFSLVERLSETTNLCLFAHPGMFIFNRDLYWCPTFNKLKTHLKTQRLVCGF |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0006270 | OsNaBo_11g0006270.01 | Chr11 | 5023079 | 5024815 | - | NAM | ||
| CDS seq | atgcagtcctcgccaccgcgggctaagcggcgccggcgcgaggccaaggacgacgaagacgcgccgtccgcgtcctctccgcgctcccggcgcacgaggtcgtgcggacgagcgtgctgtcccggcgctggcgcgacgtgtggaggtccgccccggtcgtccgcgtcaccgccgccgcggggggggggggggggggggggggccaccgagttcaacgtgttcctcgacggcctgctccgactccgcggccgccgcggcggcgacgacggcgcgcggctggagtggttcgtgctcgacctcggtttcccggccccggGtacctccccggcaccgtcaacgagcagcacatcagccgcgcgctccgcctccgcctccgctccttccaagaacggatgctgctggtctgatggcttgaaaatcttcagcctggtcgagcggctgtcagaaactacaaacttgtgtttgtttgctcatcctggaatgtttattttcaatagggatttgtactggtgccctacatttaacaagctgaagactcacttgaagactcaacgattggtgtgtggattctga
More
|
|||||||
| Protein seq | MQSSPPRAKRRRREAKDDEDAPSASSPRSRRTRSCGRACCPGAGATCGGPPRSSASPPPRGGGGGGGATEFNVFLDGLLRLRGRRGGDDGARLEWFVLDLGFPAPGTSPAPSTSSTSAARSASASAPSKNGCCWSDGLKIFSLVERLSETTNLCLFAHPGMFIFNRDLYWCPTFNKLKTHLKTQRLVCGF |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0201441 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g09510 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0201441 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006460 | SBH | 0.191376 | 3.567553 | 2.031024 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006490 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006490 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006380 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006370 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0083300 | SBH | 2.6366925 | 3.240256 | 2.232241 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006390 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0084800 | SBH | 2.744465 | 3.074941 | 5.580937 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006360 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006450 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006440 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006440 | SBH | 0.163583 | 0.0 | 0.081721 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006470 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006470 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006280 | RBH | 0.0 | 0.0 | 0.0 |
