Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_09g0004780 OGI:09023160 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr09:8269786-8271330
Gene Symbol -
DNA seq

atgcttcatcgtcatcatgcaaacctaagtctgctagtacggcagatatcccttagttttttgaatgcttgcaacactgactgtaaacattattcagcagaaggccaagcagaaatttgcattgaaactctgctcaccaacttgacggcctgctgggagagaagcaggacagggagcaaccgacccgagtgtaagattccgttattatgccctccgcagaggccggctgcggtgtgcatcggccccaaccaccacaatcccttctaccacctgatggagcaggagaagaaggtgatgctctacggcattctgatcctggtggacgagcagcacaaggctgccgtgctgaggagattagtggatgcggtcactgccctcgaaagcgttgcgaaggagcattattacatggagcaggtgccttgcgatgccatgagacgtactgcgggtttcgtgcagatgctgctcctcgacggatgctacatccttggcaagttcgtgctccatgacctcttactcgtcagggccaacggtgcggggacgagccagcagcagcaacatggtactggaagcgcgatgcagaacatggaattggtgcgcgacgtgttctaccgcctggataaccagatacccttctgtgtcctccgcgccatctacggggtgctccgtgaatgtagaaccacgccgggggtgatggcgagggagctcgatgagacgttggccgtccaagtccaggcacttctcaaacatttcggatactccattaggaaccaagtgccccgcgagatctggcacctgcatcacatgctgcacaagcacttcgtcccacaggacgatcctattcctaccggcgatgctgttcggctgccggtcgacgtcgtcgacaccggccggagatcagctacggcagccgcccccaccttgtaccggtggcgcgcagcgacgttctaccatgccaccggcgtgatcttcatgaaacgccacctccgccacggcgccagcagcggcgcgtggcgctggttcgtcgacggcggcggcgcccgctccgttctggacgtgaagttccatccgctgacgctgcggctgagcatcccgccgctcatggtggacatgaacacgtccacggtcctccggaacctgatgatgctggagcagcacaacccgagcctggggagccaggtcacggcctactgctacttcctgtcgcagcttgccggcacggcgagcgacgtcgcgctcctcgccaagaaggggatcatcgtgagcctcctggccagcgacggcgacgtcgccaggatgctcggcgagctctgcgtcggcatcaccatcaacccggccgacgagcgcagccacaactacctgctcgacacgaggaagggcctcgaacgtatgtacaagacccgcgtgattaggtggatagcgcagctctaccaccgacacttgagcaatccgttcgtgctgatggtgctggtggctgccatggttggatttgtctgtgaacttatacaggcaatctatgcagtcaagtccttcaagcgccaaccataa

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CDS seq

atgcttcatcgtcatcatgcaaacctaagtctgctagtacggcagatatcccttagttttttgaatgcttgcaacactgactgtaaacattattcagcagaaggccaagcagaaatttgcattgaaactctgctcaccaacttgacggcctgctgggagagaagcaggacagggagcaaccgacccgagtgtaagattccgttattatgccctccgcagaggccggctgcggtgtgcatcggccccaaccaccacaatcccttctaccacctgatggagcaggagaagaaggtgatgctctacggcattctgatcctggtggacgagcagcacaaggctgccgtgctgaggagattagtggatgcggtcactgccctcgaaagcgttgcgaaggagcattattacatggagcaggtgccttgcgatgccatgagacgtactgcgggtttcgtgcagatgctgctcctcgacggatgctacatccttggcaagttcgtgctccatgacctcttactcgtcagggccaacggtgcggggacgagccagcagcagcaacatggtactggaagcgcgatgcagaacatggaattggtgcgcgacgtgttctaccgcctggataaccagatacccttctgtgtcctccgcgccatctacggggtgctccgtgaatgtagaaccacgccgggggtgatggcgagggagctcgatgagacgttggccgtccaagtccaggcacttctcaaacatttcggatactccattaggaaccaagtgccccgcgagatctggcacctgcatcacatgctgcacaagcacttcgtcccacaggacgatcctattcctaccggcgatgctgttcggctgccggtcgacgtcgtcgacaccggccggagatcagctacggcagccgcccccaccttgtaccggtggcgcgcagcgacgttctaccatgccaccggcgtgatcttcatgaaacgccacctccgccacggcgccagcagcggcgcgtggcgctggttcgtcgacggcggcggcgcccgctccgttctggacgtgaagttccatccgctgacgctgcggctgagcatcccgccgctcatggtggacatgaacacgtccacggtcctccggaacctgatgatgctggagcagcacaacccgagcctggggagccaggtcacggcctactgctacttcctgtcgcagcttgccggcacggcgagcgacgtcgcgctcctcgccaagaaggggatcatcgtgagcctcctggccagcgacggcgacgtcgccaggatgctcggcgagctctgcgtcggcatcaccatcaacccggccgacgagcgcagccacaactacctgctcgacacgaggaagggcctcgaacgtatgtacaagacccgcgtgattaggtggatagcgcagctctaccaccgacacttgagcaatccgttcgtgctgatggtgctggtggctgccatggttggatttgtctgtgaacttatacaggcaatctatgcagtcaagtccttcaagcgccaaccataa

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Protein seq

MLHRHHANLSLLVRQISLSFLNACNTDCKHYSAEGQAEICIETLLTNLTACWERSRTGSNRPECKIPLLCPPQRPAAVCIGPNHHNPFYHLMEQEKKVMLYGILILVDEQHKAAVLRRLVDAVTALESVAKEHYYMEQVPCDAMRRTAGFVQMLLLDGCYILGKFVLHDLLLVRANGAGTSQQQQHGTGSAMQNMELVRDVFYRLDNQIPFCVLRAIYGVLRECRTTPGVMARELDETLAVQVQALLKHFGYSIRNQVPREIWHLHHMLHKHFVPQDDPIPTGDAVRLPVDVVDTGRRSATAAAPTLYRWRAATFYHATGVIFMKRHLRHGASSGAWRWFVDGGGARSVLDVKFHPLTLRLSIPPLMVDMNTSTVLRNLMMLEQHNPSLGSQVTAYCYFLSQLAGTASDVALLAKKGIIVSLLASDGDVARMLGELCVGITINPADERSHNYLLDTRKGLERMYKTRVIRWIAQLYHRHLSNPFVLMVLVAAMVGFVCELIQAIYAVKSFKRQP

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_09g0004780 OsPr106_09g0004780.01 Chr09 8269786 8271330 + NAM
CDS seq

atgcttcatcgtcatcatgcaaacctaagtctgctagtacggcagatatcccttagttttttgaatgcttgcaacactgactgtaaacattattcagcagaaggccaagcagaaatttgcattgaaactctgctcaccaacttgacggcctgctgggagagaagcaggacagggagcaaccgacccgagtgtaagattccgttattatgccctccgcagaggccggctgcggtgtgcatcggccccaaccaccacaatcccttctaccacctgatggagcaggagaagaaggtgatgctctacggcattctgatcctggtggacgagcagcacaaggctgccgtgctgaggagattagtggatgcggtcactgccctcgaaagcgttgcgaaggagcattattacatggagcaggtgccttgcgatgccatgagacgtactgcgggtttcgtgcagatgctgctcctcgacggatgctacatccttggcaagttcgtgctccatgacctcttactcgtcagggccaacggtgcggggacgagccagcagcagcaacatggtactggaagcgcgatgcagaacatggaattggtgcgcgacgtgttctaccgcctggataaccagatacccttctgtgtcctccgcgccatctacggggtgctccgtgaatgtagaaccacgccgggggtgatggcgagggagctcgatgagacgttggccgtccaagtccaggcacttctcaaacatttcggatactccattaggaaccaagtgccccgcgagatctggcacctgcatcacatgctgcacaagcacttcgtcccacaggacgatcctattcctaccggcgatgctgttcggctgccggtcgacgtcgtcgacaccggccggagatcagctacggcagccgcccccaccttgtaccggtggcgcgcagcgacgttctaccatgccaccggcgtgatcttcatgaaacgccacctccgccacggcgccagcagcggcgcgtggcgctggttcgtcgacggcggcggcgcccgctccgttctggacgtgaagttccatccgctgacgctgcggctgagcatcccgccgctcatggtggacatgaacacgtccacggtcctccggaacctgatgatgctggagcagcacaacccgagcctggggagccaggtcacggcctactgctacttcctgtcgcagcttgccggcacggcgagcgacgtcgcgctcctcgccaagaaggggatcatcgtgagcctcctggccagcgacggcgacgtcgccaggatgctcggcgagctctgcgtcggcatcaccatcaacccggccgacgagcgcagccacaactacctgctcgacacgaggaagggcctcgaacgtatgtacaagacccgcgtgattaggtggatagcgcagctctaccaccgacacttgagcaatccgttcgtgctgatggtgctggtggctgccatggttggatttgtctgtgaacttatacaggcaatctatgcagtcaagtccttcaagcgccaaccataa

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Protein seq

MLHRHHANLSLLVRQISLSFLNACNTDCKHYSAEGQAEICIETLLTNLTACWERSRTGSNRPECKIPLLCPPQRPAAVCIGPNHHNPFYHLMEQEKKVMLYGILILVDEQHKAAVLRRLVDAVTALESVAKEHYYMEQVPCDAMRRTAGFVQMLLLDGCYILGKFVLHDLLLVRANGAGTSQQQQHGTGSAMQNMELVRDVFYRLDNQIPFCVLRAIYGVLRECRTTPGVMARELDETLAVQVQALLKHFGYSIRNQVPREIWHLHHMLHKHFVPQDDPIPTGDAVRLPVDVVDTGRRSATAAAPTLYRWRAATFYHATGVIFMKRHLRHGASSGAWRWFVDGGGARSVLDVKFHPLTLRLSIPPLMVDMNTSTVLRNLMMLEQHNPSLGSQVTAYCYFLSQLAGTASDVALLAKKGIIVSLLASDGDVARMLGELCVGITINPADERSHNYLLDTRKGLERMYKTRVIRWIAQLYHRHLSNPFVLMVLVAAMVGFVCELIQAIYAVKSFKRQP

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 2.212817 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0301800 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g13040 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0301800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0004820 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0004840 RBH 0.0 1.472149 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0004950 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0004720 RBH 0.0 0.040374 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0004920 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0132700 RBH 0.062336 0.17557 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0004930 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0126300 RBH 0.0113035 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0004910 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0004780 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0004850 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0004650 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0004710 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G005010 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0004850 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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