Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_06g0020950 OGI:10017890 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr06:24146525-24151622
Gene Symbol -
DNA seq

tcaagcagcaccaggagtatcaacacgtggaaacttagcctacaaagaaaattattaattaaaatgaaaaaaatatatagaagatagaaaactttaacttacagggtcaaaccaattgagaactacatcttcaacttcagtacttaaaagcttgttgctaggatggaagaaaattctatttgcatactgaactcgaatgttactgatattgtcatttgagaattcattttgcagaataactcttggagaccacaattccatgcttttcataacaaaaatcccagaatccgcactatgaaacaaaaaagaaaaaaataagctaacatcaaaacagaacaaaaaactacaaacaaatcagagaaaataaaataagctaacctagaaatatgggctggaacagatggaaacttcaatttgaaattgctaaaattcattggagagcattcaaatttgtcccaaaaagtctggagattatttatctgaaaataaaacagatcaaaataacaattaaatataaaatAaaaaaatgcaaatcaaaataataaaactaaaatcataaaagtgcaacttaccaattgagtcataataggttcatagaaatcatctccttcatgatatacacaatctagtatgacaagcattctatcctttaaatccacaatgaatagaaaccaatgttgaagatgtagaataggaaaatataactgcaaaaatacatatgacagaagtacatataagtaaaaaaaagatggttgaaataataagaggaaaaaaaaatactactaacaaaataccatgtcacaaagatgcaattttctagcattggtagctccttcgaatgacttcttaaccttttccagtcctttatcacttatatcattaatcaattcagcctatcaaatgcaatacagctaatcaacatatgcataatattttggcaaaaaaaataaaactgaagatataaaaatatatacttacaccaattgatggaaaaaagtagtttcttttagactttgatggatgactatcttgaaacaaaacacggcagaagactgaaatgacataaggtgacacaatacaattcttcttgagggaatgaccaaaactgtagaactttgctttgacattgtcaatatcaactgcatagtaactacaaaaataaaatataaagcataaaaagctaaaatcaaatcaaataaaaataaacagttaaaagattagccatttagtacctctgccactttgaactatctggaagacgacaaattgcaatataatatctattctcttgatcagaaactgtaaaacgacgccttagagaaaagacaaaaggatcagaagcatgcctagcaggaactaaaacccttcttggaccatgtacaggaagctttccgccagaagaactcattccacgaatgtacttgttcagttgatttgttgaattatataactgttcagctttaacacacattctttttgatgaatcacaaattttattttcacccaaacaaacaacatcaggagaattctgtgaaagaaatgaaaaattgaaaaaaaaaacagataaaaaaacataataaagaaaattttgaagttacaagaaacataagtaagaacattaaaaaaaagtataacttactgtaacatctttaaaaagcctcttattcgaattctgagaattatgtgctgcactagttccagggttttcattaatgacagtgttgcaagtatcattgtctggagtttcagggagtgattgaaaagaaataaaaggctgcaatttcaaatataacagagaagaaagattaaataatgtaaaaatatccaatgaaaatacaaatgctgcctgaaaacagatatgtttatataaaacttgcttcacaaaacagtacaatgcaaaaaaagaacataaaaattcttacttgggttgaagaaggggaaacattttcagagccttcatcttcattctgaactgagaaaacatgttcataatcactagcatcatcttcagaatctagcaaactaaataagggccttgactgattaaagatattttccacattcccataatcattaaatcttgatctaaatttttttgcaacacgatgaatagcagcagctgcagcagcaattccagaacctacaaaaatttatagaaagctaaatttgagaaaacattccgaagtgaataagttgaaacagataaatttgaaaaaacttttcacaagtaaaaaaatcagtaaccgaaaagaaaaaaagcttaaggtaactgaccatccaaaagatcatcaacagactgtttggaatgattagcattaccaacttgaggggtaacaaaattcagatctaacaggaagaaattaaaaaaatattaatgcatgattaaaacaattaacagtataatttaacataacaaatttggtacaaaattaccatcatcacattgtcttgaatcattaagttcaacagcagatttagaaacaaaagcatcttcatttccctataaaattttcaattcaagaactcaaaaaacaagtaatataaataaaacttgcaaataaattatgcaatatataacaaaaaaaaacttacatgaaaagcattatgaataggagaatgaggtaacacattatcattaggcacatgaacttctgcatataaaacgaacgcattaacaaaataaactgaatacaaaataaaaaaaataaaaacagcaagaggaaaaactcaaaacaccaaaagtattataaaaatatgacttacgagcactaataccagcagaagaaataccaatgtcatcatcagctttagaagtgccaacattctcaattacattttcctcaattacaacattttgatctgattcattacagctagcttcaccaatcatagcaagaacagaaatcaaaagatctccacaagatgaatcatcaatagtatgaagtgaagtgcaatgactatcaaacatagaacatattttctctttcatgtaaactggcaacatattctgaagagcacagtcaagtttctgctgaaaagaaatccttctttcatcacaaggttgaggctacaatgaaaaaaaagaacattaatacaatatgcattataaggaaaaataataaagaaattcatttttattttaaaaaatagtattaacctggaaatagcaagtagatttaaaatcccttagaggcctaagaccaaaagtgtcatcatcaattttatcaaactcagaataagcatggatcatgtcacttttccaaacacaaatacgtggaatttcatttgaaacattgttatcaccaaattcaacattgtcaaggtacaccacctaccaaaaaaatataaaaagaacaaattaataataagttaatactgaaaagagaaaaaaattaaaaataacaaatatgtcaaatacttacagcccacatgtacaaacatcctcccaagctgttagtcttcacaaacttcttcatgtagttcattgaccaatcatatatgaatttggaccaatcataattcctcagattattaacatcttgaaaaatggtgaggtacttggtgcttggcaatatagaagaattcgggcaaagaaaacaagccaaagcaacaataagaaatgaagtaatcactttctcatttgtcaaaggttcctttttaatgaactgttctccaaagaacctcactgaaggcaaacaactaagcccatacatcgaaagaatgtattcctttccagcttcaaaatcctttccaaactccaagccaccagaaggtaaaccaaaaatgtcacaaacagtctgctttgtaactgaaattactttgtctcttaaaattatttgtgaggtcttaaaatccacatgttttgcaatccaagtagcaaatttatttggaacataattgctgttgaactcaagcaaattctgaaaaccagcaccctgaataatagttttctgatgtggagaaagtgcagatataactcgacagaaatacttggtggaaaaccttgtaaatgaagaatcaatctttgcagcctcctttagcttattatccttattaaataacaaaaaaattgcaaaataaataaaaaatagatatataatacaaaagtaaacataacaaatatgtaaagcacaacaaaatgtaagatatatacctattatgtgtattggcaaaccatttgcaatacgcagcaaacataaaacaggtaccaatgttcatgttgtggaagagcaacaataatgaaaaagctcttttcaagtgagcaaactaattcaagtgatcaggcaaaaaaaaatttcgcatatgatggtgagaagagtttcttcactattggtgctcttagacaagtaaacaaacaactactaaatagagaatcatcagaaaacaaaattgaaagaaaacagtagaaaaaaataaacactaagtaaagtagaagaacaatactacttaaactctaagtaaagaacaatttctaaacaaatgcaagatcttaagacaatctgagacaagtaaacagaaaaaatatctaaagtacaataaaatagaacatatgtaggaaaagaaatgggtaacttacataacaacaagcaatataaaaattaaaatcaaatgtgtagttcacctaaatcagaaaaataaattactgcctataaaattcaggaatgtacttacaaatataaaaataacagtaaaagaacttagtaaataacaacataccttcgcataacgaaaagcatgagaacaagattttcgattcaatatttctttcttaacatctttaacaacctataataacaatagaaaaaatatacattAaaaaaataaaaaacaataacaaattataaatacagtcaagaaagtaatactacctcctttctaaaaatttcatatataatatcatcaagttcacgacgagaaagctctccatcctataattcatatatttcaaaatagatattagtaaactacaaactaaattcatataacatagtatttcataaaaaaacattaataaaagactataacttacacaatcagattcatcagaatcatctacaataggtgctttacccaaatttctcttagcagcaggagccat

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CDS seq

atggctcctgctgctaagagaaatttgggtaaagcacctattgtagatgattctgatgaatctgattgtgatggagagctttctcgtcgtgaacttgatgatattatatatgaaatttttagaaaggaggttgttaaagatgttaagaaagaaatattgaatcgaaaatcttgttctcatgcttttcgttatgcgaaggtgaactacacatttgattttaatttttatattgcttgttgttatgataataagctaaaggaggctgcaaagattgattcttcatttacaaggttttccaccaagtatttctgtcgagttatatctgcactttctccacatcagaaaactattattcagggtgctggttttcagaatttgcttgagttcaacagcaattatgttccaaataaatttgctacttggattgcaaaacatgtggattttaagacctcacaaataattttaagagacaaagtaatttcagttacaaagcagactgtttgtgacatttttggtttaccttctggtggcttggagtttggaaaggattttgaagctggaaaggaatacattctttcgatgtatgggcttagttgtttgccttcagtgaggttctttggagaacagttcattaaaaaggaacctttgacaaatgagaaagtgattacttcatttcttattgttgctttggcttgttttctttgcccgaattcttctatattgccaagcaccaagtacctcaccatttttcaagatgttaataatctgaggaattatgattggtccaaattcatatatgattggtcaatgaactacatgaagaagtttgtgaagactaacagcttgggaggatgtttgtacatgtgggctgtggtgtaccttgacaatgttgaatttggtgataacaatgtttcaaatgaaattccacgtatttgtgtttggaaaagtgacatgatccatgcttattctgagtttgataaaattgatgatgacacttttggtcttaggcctctaagggattttaaatctacttgctatttccagcctcaaccttgtgatgaaagaaggatttcttttcagcagaaacttgactgtgctcttcagaatatgttgccagtttacatgaaagagaaaatatgttctatgtttgatagtcattgcacttcacttcatactattgatgattcatcttgtggagatcttttgatttctgttcttgctatgattggtgaagctagctgtaatgaatcagatcaaaatgttgtaattgaggaaaatgtaattgagaatgttggcacttctaaagctgatgatgacattggtatttcttctgctggtattagtgctctttattttgttaatgcgttcgttttatatgcagaagttcatgtgcctaatgataatgtgttacctcattctcctattcataatgcttttcatggaaatgaagatgcttttgtttctaaatctgctgttgaacttaatgattcaagacaatgtgatgatgatctgaattttgttacccctcaagttggtaatgctaatcattccaaacagtctgttgatgatcttttggatggttctggaattgctgctgcagctgctgctattcatcgtgttgcaaaaaaatttagatcaagatttaatgattatgggaatgtggaaaatatctttaatcagtcaaggcccttatttagtttgctagattctgaagatgatgctagtgattatgaacatgttttctcagttcagaatgaagatgaaggctctgaaaatgtttccccttcttcaacccaaccttttatttcttttcaatcactccctgaaactccagacaatgatacttgcaacactgtcattaatgaaaaccctggaactagtgcagcacataattctcagaattcgaataagaggctttttaaagatgttacaaattctcctgatgttgtttgtttgggtgaaaataaaatttgtgattcatcaaaaagaatgtgtgttaaagctgaacagttatataattcaacaaatcaactgaacaagtacattcgtggaatgagttcttctggcggaaagcttcctgtacatggtccaagaagggttttagttcctgctaggcatgcttctgatccttttgtcttttctctaaggcgtcgttttacagtttctgatcaagagaatagatattatattgcaatttgtcgtcttccagatagttcaaagtggcagagttactatgcagttgatattgacaatgtcaaagcaaagttctacagttttggtcattccctcaagaagaattgtattgtgtcaccttatgtcatttcagtcttctgccgtgttttgtttcaagatagtcatccatcaaagtctaaaagaaactacttttttccatcaattggtgctgaattgattaatgatataagtgataaaggactggaaaaggttaagaagtcattcgaaggagctaccaatgctagaaaattgcatctttgtgacatgttatattttcctattctacatcttcaacattggtttctattcattgtggatttaaaggatagaatgcttgtcatactagattgtgtatatcatgaaggagatgatttctatgaacctattatgactcaattgataaataatctccagactttttgggacaaatttgaatgctctccaatgaattttagcaatttcaaattgaagtttccatctgttccagcccatatttctagtgcggattctgggatttttgttatgaaaagcatggaattgtggtctccaagagttattctgcaaaatgaattctcaaatgacaatatcagtaacattcgagttcagtatgcaaatagaattttcttccatcctagcaacaagcttttaagtactgaagttgaagatgtagttctcaattggtttgaccctgctaagtttccacgtgttgatactcctggtgctgcttga

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Protein seq

MAPAAKRNLGKAPIVDDSDESDCDGELSRRELDDIIYEIFRKEVVKDVKKEILNRKSCSHAFRYAKVNYTFDFNFYIACCYDNKLKEAAKIDSSFTRFSTKYFCRVISALSPHQKTIIQGAGFQNLLEFNSNYVPNKFATWIAKHVDFKTSQIILRDKVISVTKQTVCDIFGLPSGGLEFGKDFEAGKEYILSMYGLSCLPSVRFFGEQFIKKEPLTNEKVITSFLIVALACFLCPNSSILPSTKYLTIFQDVNNLRNYDWSKFIYDWSMNYMKKFVKTNSLGGCLYMWAVVYLDNVEFGDNNVSNEIPRICVWKSDMIHAYSEFDKIDDDTFGLRPLRDFKSTCYFQPQPCDERRISFQQKLDCALQNMLPVYMKEKICSMFDSHCTSLHTIDDSSCGDLLISVLAMIGEASCNESDQNVVIEENVIENVGTSKADDDIGISSAGISALYFVNAFVLYAEVHVPNDNVLPHSPIHNAFHGNEDAFVSKSAVELNDSRQCDDDLNFVTPQVGNANHSKQSVDDLLDGSGIAAAAAAIHRVAKKFRSRFNDYGNVENIFNQSRPLFSLLDSEDDASDYEHVFSVQNEDEGSENVSPSSTQPFISFQSLPETPDNDTCNTVINENPGTSAAHNSQNSNKRLFKDVTNSPDVVCLGENKICDSSKRMCVKAEQLYNSTNQLNKYIRGMSSSGGKLPVHGPRRVLVPARHASDPFVFSLRRRFTVSDQENRYYIAICRLPDSSKWQSYYAVDIDNVKAKFYSFGHSLKKNCIVSPYVISVFCRVLFQDSHPSKSKRNYFFPSIGAELINDISDKGLEKVKKSFEGATNARKLHLCDMLYFPILHLQHWFLFIVDLKDRMLVILDCVYHEGDDFYEPIMTQLINNLQTFWDKFECSPMNFSNFKLKFPSVPAHISSADSGIFVMKSMELWSPRVILQNEFSNDNISNIRVQYANRIFFHPSNKLLSTEVEDVVLNWFDPAKFPRVDTPGAA

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_06g0020950 OsPr106_06g0020950.01 Chr06 24146525 24151622 - NAM
CDS seq

atggctcctgctgctaagagaaatttgggtaaagcacctattgtagatgattctgatgaatctgattgtgatggagagctttctcgtcgtgaacttgatgatattatatatgaaatttttagaaaggaggttgttaaagatgttaagaaagaaatattgaatcgaaaatcttgttctcatgcttttcgttatgcgaaggtgaactacacatttgattttaatttttatattgcttgttgttatgataataagctaaaggaggctgcaaagattgattcttcatttacaaggttttccaccaagtatttctgtcgagttatatctgcactttctccacatcagaaaactattattcagggtgctggttttcagaatttgcttgagttcaacagcaattatgttccaaataaatttgctacttggattgcaaaacatgtggattttaagacctcacaaataattttaagagacaaagtaatttcagttacaaagcagactgtttgtgacatttttggtttaccttctggtggcttggagtttggaaaggattttgaagctggaaaggaatacattctttcgatgtatgggcttagttgtttgccttcagtgaggttctttggagaacagttcattaaaaaggaacctttgacaaatgagaaagtgattacttcatttcttattgttgctttggcttgttttctttgcccgaattcttctatattgccaagcaccaagtacctcaccatttttcaagatgttaataatctgaggaattatgattggtccaaattcatatatgattggtcaatgaactacatgaagaagtttgtgaagactaacagcttgggaggatgtttgtacatgtgggctgtggtgtaccttgacaatgttgaatttggtgataacaatgtttcaaatgaaattccacgtatttgtgtttggaaaagtgacatgatccatgcttattctgagtttgataaaattgatgatgacacttttggtcttaggcctctaagggattttaaatctacttgctatttccagcctcaaccttgtgatgaaagaaggatttcttttcagcagaaacttgactgtgctcttcagaatatgttgccagtttacatgaaagagaaaatatgttctatgtttgatagtcattgcacttcacttcatactattgatgattcatcttgtggagatcttttgatttctgttcttgctatgattggtgaagctagctgtaatgaatcagatcaaaatgttgtaattgaggaaaatgtaattgagaatgttggcacttctaaagctgatgatgacattggtatttcttctgctggtattagtgctctttattttgttaatgcgttcgttttatatgcagaagttcatgtgcctaatgataatgtgttacctcattctcctattcataatgcttttcatggaaatgaagatgcttttgtttctaaatctgctgttgaacttaatgattcaagacaatgtgatgatgatctgaattttgttacccctcaagttggtaatgctaatcattccaaacagtctgttgatgatcttttggatggttctggaattgctgctgcagctgctgctattcatcgtgttgcaaaaaaatttagatcaagatttaatgattatgggaatgtggaaaatatctttaatcagtcaaggcccttatttagtttgctagattctgaagatgatgctagtgattatgaacatgttttctcagttcagaatgaagatgaaggctctgaaaatgtttccccttcttcaacccaaccttttatttcttttcaatcactccctgaaactccagacaatgatacttgcaacactgtcattaatgaaaaccctggaactagtgcagcacataattctcagaattcgaataagaggctttttaaagatgttacaaattctcctgatgttgtttgtttgggtgaaaataaaatttgtgattcatcaaaaagaatgtgtgttaaagctgaacagttatataattcaacaaatcaactgaacaagtacattcgtggaatgagttcttctggcggaaagcttcctgtacatggtccaagaagggttttagttcctgctaggcatgcttctgatccttttgtcttttctctaaggcgtcgttttacagtttctgatcaagagaatagatattatattgcaatttgtcgtcttccagatagttcaaagtggcagagttactatgcagttgatattgacaatgtcaaagcaaagttctacagttttggtcattccctcaagaagaattgtattgtgtcaccttatgtcatttcagtcttctgccgtgttttgtttcaagatagtcatccatcaaagtctaaaagaaactacttttttccatcaattggtgctgaattgattaatgatataagtgataaaggactggaaaaggttaagaagtcattcgaaggagctaccaatgctagaaaattgcatctttgtgacatgttatattttcctattctacatcttcaacattggtttctattcattgtggatttaaaggatagaatgcttgtcatactagattgtgtatatcatgaaggagatgatttctatgaacctattatgactcaattgataaataatctccagactttttgggacaaatttgaatgctctccaatgaattttagcaatttcaaattgaagtttccatctgttccagcccatatttctagtgcggattctgggatttttgttatgaaaagcatggaattgtggtctccaagagttattctgcaaaatgaattctcaaatgacaatatcagtaacattcgagttcagtatgcaaatagaattttcttccatcctagcaacaagcttttaagtactgaagttgaagatgtagttctcaattggtttgaccctgctaagtttccacgtgttgatactcctggtgctgcttga

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Protein seq

MAPAAKRNLGKAPIVDDSDESDCDGELSRRELDDIIYEIFRKEVVKDVKKEILNRKSCSHAFRYAKVNYTFDFNFYIACCYDNKLKEAAKIDSSFTRFSTKYFCRVISALSPHQKTIIQGAGFQNLLEFNSNYVPNKFATWIAKHVDFKTSQIILRDKVISVTKQTVCDIFGLPSGGLEFGKDFEAGKEYILSMYGLSCLPSVRFFGEQFIKKEPLTNEKVITSFLIVALACFLCPNSSILPSTKYLTIFQDVNNLRNYDWSKFIYDWSMNYMKKFVKTNSLGGCLYMWAVVYLDNVEFGDNNVSNEIPRICVWKSDMIHAYSEFDKIDDDTFGLRPLRDFKSTCYFQPQPCDERRISFQQKLDCALQNMLPVYMKEKICSMFDSHCTSLHTIDDSSCGDLLISVLAMIGEASCNESDQNVVIEENVIENVGTSKADDDIGISSAGISALYFVNAFVLYAEVHVPNDNVLPHSPIHNAFHGNEDAFVSKSAVELNDSRQCDDDLNFVTPQVGNANHSKQSVDDLLDGSGIAAAAAAIHRVAKKFRSRFNDYGNVENIFNQSRPLFSLLDSEDDASDYEHVFSVQNEDEGSENVSPSSTQPFISFQSLPETPDNDTCNTVINENPGTSAAHNSQNSNKRLFKDVTNSPDVVCLGENKICDSSKRMCVKAEQLYNSTNQLNKYIRGMSSSGGKLPVHGPRRVLVPARHASDPFVFSLRRRFTVSDQENRYYIAICRLPDSSKWQSYYAVDIDNVKAKFYSFGHSLKKNCIVSPYVISVFCRVLFQDSHPSKSKRNYFFPSIGAELINDISDKGLEKVKKSFEGATNARKLHLCDMLYFPILHLQHWFLFIVDLKDRMLVILDCVYHEGDDFYEPIMTQLINNLQTFWDKFECSPMNFSNFKLKFPSVPAHISSADSGIFVMKSMELWSPRVILQNEFSNDNISNIRVQYANRIFFHPSNKLLSTEVEDVVLNWFDPAKFPRVDTPGAA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g36960 SBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0021670 RBH 0.0 0.0 0.213992
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0015190 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0015790 SBH 0.633446 0.456944 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0365700 SBH 0 0.0056075 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0020390 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0317700 SBH 0 0 0.0066345
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0037540 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0000460 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0000450 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0021170 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0037230 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G000440 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0000450 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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