Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLaMu_03g0037230 OGI:10017890 | 16/16 LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) Chr03:35511499-35516596
Gene Symbol -
DNA seq

tcaagcagcaccaggagtatcaacacgtggaaacttagcctacaaagaaaattattaattaaaatgAaaaaaatatatagaagatagaaaactttaacttacagggtcaaaccaattgagaactacatcttcaacttcagtacttaaaagcttgttgctaggatgaaagaaaattctatttgcatactgaactcgaatgttactgatattgtcatttgagaattcattttgcagaataactcttggagaccacaattccatgcttttcataacaaaaatcccagaatccgcactatgaaacaaaaaagaaaaaaataagctaacatcaaaacagaacaaaaaactacaaacaaatcagagaaaataaaataagctaacctagaaatatgggctggaacagatggaaacttcaatttgaaattgctaaaattcattggagagcattcaaatttgtcccaaaaagtctggagattatttatctgaaaataaaacagatcaaaataacaattaaatataaaataaaaaaaatgcaaatcaaaataataaaactaaaatcataaaagtgcaacttaccaattgagtcataataggttcatagaaatcatctccttcatgatatacacaatctagtatgacaagcattctatcctttaaatccacaatgaatagaaaccaatgctgaagatgtagaataggaaaatataactgcaaaaatacatatgacaaaagtacatataagtaaaaaaaagatggttgaaataataagaggaaaaaaaatactactaacaaaataccatgtcacaaagatgcaattttctagcattggtagctccttcgaatgacttcttaaccttttccagtcctttatcacttatatcattaatcaattcagcctatcaaatgcaatacagctaatcaacatatgcataatattttggcaaaaaaataaaactgaagatataaaaatatatacttacaccaattgatggAaaaaagtagtttcttttagactttgatggatgactatcttgaaacaaaacacggcagaagactgaaatgacataaggtgacacaatacaattcttcttgagggaatgaccaaaactgtagaactttgctttaacattgtcaatatcaactgcatagtaactacaaaaataaaatataaagcataaaaagctaaaatcaaatcaaataaaaataaacagttaaaagattagccatttagtacctctgccactttgaattatctgaaagacgacaaattgcaatataatatctattctcttgatcagaaactgtaaaacgacgccttggagaaaagacaaaaggatcagaagcatgcctagcaggaactaaaacccttcttggaccatgtacaggaagctttccgccagaagaactcattccacgaatgtacttgttcagttgatttgttgaattatataactgttcagctttaacacacattctttttgatgaatcacaaattttattttcacccaaacaaacaacatcaggagaattctgtgaaagaaatgaaaaattgAaaaaaaaaatcagatcaaaaaacataataaagaaaattttgaagttacgagaaacataagtaagaacattaaaaaaaagtataacttactgtaacatctttaaaaagcctcttgttcgaattctgagaattatgtgctgcactagtttcagggttttcattaatgacagtgttgcaagtatcattgtctggagtttcagggagtgattgaaaagaaataaaaggctgcaatttcaaatataacagagaagaaagattaaataatgtaaaaatatccaatgaaaatacaaatgctgcctgaaaacagatatgtttatataaaacttgcttcacaaaacagtacaatgcaaaaaaagaacataaaaattcttacttgggttgaagaaggggaaacattttcagagccttcatcttcattctgaactgagaaaacatgttcataatcactaacatcatcttcagaatctagcaaactaaataagggccttgactgattaaagatattttccacattcccataatcattaaatcttgatctaaatttttttgcaacacgatgaatagcagcagctgcagcagcaattccagaacctacAaaaatttatagaaagctaaatttgagaaaacattccgaagtgaataagttgaaacagataaatttgaaaaaacttttcacaagtaaaaaaatcagtaaccgaaaagAaaaaaagcttaaggtaactgaccatccaaaagatcatcaacagactgtttggaatgattagcattaccaacttgaggggtaacaaaattcagatctaacaggaagaaattaaaaaaatattaatgcatgattaaaacaattaacagtataatttaacataacaaatttggtacaaaattaccatcatcacattgtcttgaatcattaagttcaacagcagatttagaaacaaaagcatcttcatttccctataaaattttcaattcaagaactcaaaaaacaaataatataaataaaacttgcaaataaattatgcaatatatgacaaaaaaaacttacatgaaaagcattatgaataggagaatgaggtaacacattatcattaggcacatgaacttctgcatataaaacgaacgcattaacaaaataaactgaatacaaaataaaaaaatagaaacagcaagaggaaaaactcaaaacaccaaaagtattataaaaatatgacttacaagcactaataccagcagaagaaataccaatgtcatcatcagctttagaagtgccaacattctcaattacattttcctcaattacaacattttgatctgattcattacagctagcttcaccaatcatagcaagaacagaaatcaaaagatctccacaagatgaatcatcaatagtatgaagtgacgtgcaatgactatcaaacatagaacatattttctctttcatgtaaactggcaacatattctgaagagcacagtcaagtttctgctgaaaagaaatccttctttcatcacaaggttgaggctacaatgaaaaaaaagaacattaatacaatatgcattataaggaaaaataataaagaaattcatttttattttaaaaaatagtattaacctggaaatagcaagtagatttaaaatcccttagaggcctaagaccaaaagtgtcatcatcaattttatcaaactcagaataagcatggatcatgtcacttttccaaacacaaatacgtggaatttcatttgaaacattgttatcaccaaattcaacattgtcaaggtacaccacctaccaaaaaaatataaaaagaacaaattaataataagttaatactgaaaagagaaaaaaattaaaaataacaaatatgtcaaatacttacagcccacatgtacaaacatcctcccaagctgttagtcttcacaaacttcttcatgtagttcattgaccaatcatatatgaatttggaccaatcataattcctcagattattaacatcttgaaaaatggtgaggtacttggtgcttggcaatatagaagaattcgggcaaagaaaacaaaccaaagcaacaataagaaatgaagtaatcactttctcatttgtcaaaggttcctttttaatgaactggtctccaaagaacctcactgaaggcaaacaactaagcccatacatcgaaagaatgtattcctttccagcttcaaaatcctttccaaactccaagccaccagaaggtaaaccaaaaatgtcacaaacagtctgctttgtaactgaaattactttgtctcttaaaattatttgtgaggtcttaaaatccacatgttttgcaatccaagtagcaaatttatttggaacataattgctgttaaactcaagcaaattctgaaaaccagcaccctgaataatagttttctgatgtggagaaagtgcagatataactcgacagaaatacttggtggaaaaccttgtaaatgatgaatcaatctttgcagcctcctttagcttattatccttattaaataacaaaaaaattgcaaaataaataaaaaatagatatataatacaaaagtaaacagaacaaatatgtaaagcacaacaaaatgtaagatatatacctattatgtgtattggcaaaccatttgcaatacgcagcgaacataaaacaggtaccaatgttcatgttgtggaagagcaacaataatgaaaaagctcttttcaagtgagcaaactaattcaagtgatcaggcaaaaaaaaatttcgcatatgatggtgagaagagtttcttcactattggtgctcttagacaagtaaacaaacaactactaaatagagaatcatcagaaaacaaaattgaaagaaaacagtagaaaaaaataaacactaagtaaagtagaagaacaatactgcttaaactctaagtaaagaacaatttctaaacaaatgcaagatcttaagacaatctgagacaagtaaacagaaaaaatatctaaagtacaataaaatagaacatatgtaggaaaagaaatgggtaacttacataacaacaagcaatatacaaattaaaatcaaatgtgtagttcacctaaatcagaaaaataaattactgcctataaaattcaggaatgtacttacaaatataaaaataacagtaaaagaacttagtaaataacaacataccttcgcataacgaaaagcatgagaacaagattttcgattcaatatttctttcttaacatctttaacaacctataataaaaatagaaaaaaatatacattAaaaaaaataaaaaacaataacaaattataaatacggtcaagaaagtaatactacctcctttctaaaaatttcatatataatatcatcaagttcacgacgataaagctctccatcctataattcatatatttcgaaatagatattagtaaactacaaactaaattcatataacatagtatttcataaaaaaacattaataaaagactataacttacacaatcagattcatcagaatcatctacaataggtgctttacccaaatttctcttagcagcaggagccat

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CDS seq

atggctcctgctgctaagagaaatttgggtaaagcacctattgtagatgattctgatgaatctgattgtgatggagagctttatcgtcgtgaacttgatgatattatatatgaaatttttagaaaggaggttgttaaagatgttaagaaagaaatattgaatcgaaaatcttgttctcatgcttttcgttatgcgaaggtgaactacacatttgattttaatttgtatattgcttgttgttatgataataagctaaaggaggctgcaaagattgattcatcatttacaaggttttccaccaagtatttctgtcgagttatatctgcactttctccacatcagaaaactattattcagggtgctggttttcagaatttgcttgagtttaacagcaattatgttccaaataaatttgctacttggattgcaaaacatgtggattttaagacctcacaaataattttaagagacaaagtaatttcagttacaaagcagactgtttgtgacatttttggtttaccttctggtggcttggagtttggaaaggattttgaagctggaaaggaatacattctttcgatgtatgggcttagttgtttgccttcagtgaggttctttggagaccagttcattaaaaaggaacctttgacaaatgagaaagtgattacttcatttcttattgttgctttggtttgttttctttgcccgaattcttctatattgccaagcaccaagtacctcaccatttttcaagatgttaataatctgaggaattatgattggtccaaattcatatatgattggtcaatgaactacatgaagaagtttgtgaagactaacagcttgggaggatgtttgtacatgtgggctgtggtgtaccttgacaatgttgaatttggtgataacaatgtttcaaatgaaattccacgtatttgtgtttggaaaagtgacatgatccatgcttattctgagtttgataaaattgatgatgacacttttggtcttaggcctctaagggattttaaatctacttgctatttccagcctcaaccttgtgatgaaagaaggatttcttttcagcagaaacttgactgtgctcttcagaatatgttgccagtttacatgaaagagaaaatatgttctatgtttgatagtcattgcacgtcacttcatactattgatgattcatcttgtggagatcttttgatttctgttcttgctatgattggtgaagctagctgtaatgaatcagatcaaaatgttgtaattgaggaaaatgtaattgagaatgttggcacttctaaagctgatgatgacattggtatttcttctgctggtattagtgctttttattttgttaatgcgttcgttttatatgcagaagttcatgtgcctaatgataatgtgttacctcattctcctattcataatgcttttcatggaaatgaagatgcttttgtttctaaatctgctgttgaacttaatgattcaagacaatgtgatgatgatctgaattttgttacccctcaagttggtaatgctaatcattccaaacagtctgttgatgatcttttggatggttctggaattgctgctgcagctgctgctattcatcgtgttgcaaaaaaatttagatcaagatttaatgattatgggaatgtggaaaatatctttaatcagtcaaggcccttatttagtttgctagattctgaagatgatgttagtgattatgaacatgttttctcagttcagaatgaagatgaaggctctgaaaatgtttccccttcttcaacccaaccttttatttcttttcaatcactccctgaaactccagacaatgatacttgcaacactgtcattaatgaaaaccctgaaactagtgcagcacataattctcagaattcgaacaagaggctttttaaagatgttacaaattctcctgatgttgtttgtttgggtgaaaataaaatttgtgattcatcaaaaagaatgtgtgttaaagctgaacagttatataattcaacaaatcaactgaacaagtacattcgtggaatgagttcttctggcggaaagcttcctgtacatggtccaagaagggttttagttcctgctaggcatgcttctgatccttttgtcttttctccaaggcgtcgttttacagtttctgatcaagagaatagatattatattgcaatttgtcgtctttcagataattcaaagtggcagagttactatgcagttgatattgacaatgttaaagcaaagttctacagttttggtcattccctcaagaagaattgtattgtgtcaccttatgtcatttcagtcttctgccgtgttttgtttcaagatagtcatccatcaaagtctaaaagaaactactttttTccatcaattggtgctgaattgattaatgatataagtgataaaggactggaaaaggttaagaagtcattcgaaggagctaccaatgctagaaaattgcatctttgtgacatgttatattttcctattctacatcttcagcattggtttctattcattgtggatttaaaggatagaatgcttgtcatactagattgtgtatatcatgaaggagatgatttctatgaacctattatgactcaattgataaataatctccagactttttgggacaaatttgaatgctctccaatgaattttagcaatttcaaattgaagtttccatctgttccagcccatatttctagtgcggattctgggatttttgttatgaaaagcatggaattgtggtctccaagagttattctgcaaaatgaattctcaaatgacaatatcagtaacattcgagttcagtatgcaaatagaattttctttcatcctagcaacaagcttttaagtactgaagttgaagatgtagttctcaattggtttgaccctgctaagtttccacgtgttgatactcctggtgctgcttga

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Protein seq

MAPAAKRNLGKAPIVDDSDESDCDGELYRRELDDIIYEIFRKEVVKDVKKEILNRKSCSHAFRYAKVNYTFDFNLYIACCYDNKLKEAAKIDSSFTRFSTKYFCRVISALSPHQKTIIQGAGFQNLLEFNSNYVPNKFATWIAKHVDFKTSQIILRDKVISVTKQTVCDIFGLPSGGLEFGKDFEAGKEYILSMYGLSCLPSVRFFGDQFIKKEPLTNEKVITSFLIVALVCFLCPNSSILPSTKYLTIFQDVNNLRNYDWSKFIYDWSMNYMKKFVKTNSLGGCLYMWAVVYLDNVEFGDNNVSNEIPRICVWKSDMIHAYSEFDKIDDDTFGLRPLRDFKSTCYFQPQPCDERRISFQQKLDCALQNMLPVYMKEKICSMFDSHCTSLHTIDDSSCGDLLISVLAMIGEASCNESDQNVVIEENVIENVGTSKADDDIGISSAGISAFYFVNAFVLYAEVHVPNDNVLPHSPIHNAFHGNEDAFVSKSAVELNDSRQCDDDLNFVTPQVGNANHSKQSVDDLLDGSGIAAAAAAIHRVAKKFRSRFNDYGNVENIFNQSRPLFSLLDSEDDVSDYEHVFSVQNEDEGSENVSPSSTQPFISFQSLPETPDNDTCNTVINENPETSAAHNSQNSNKRLFKDVTNSPDVVCLGENKICDSSKRMCVKAEQLYNSTNQLNKYIRGMSSSGGKLPVHGPRRVLVPARHASDPFVFSPRRRFTVSDQENRYYIAICRLSDNSKWQSYYAVDIDNVKAKFYSFGHSLKKNCIVSPYVISVFCRVLFQDSHPSKSKRNYFFPSIGAELINDISDKGLEKVKKSFEGATNARKLHLCDMLYFPILHLQHWFLFIVDLKDRMLVILDCVYHEGDDFYEPIMTQLINNLQTFWDKFECSPMNFSNFKLKFPSVPAHISSADSGIFVMKSMELWSPRVILQNEFSNDNISNIRVQYANRIFFHPSNKLLSTEVEDVVLNWFDPAKFPRVDTPGAA

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLaMu_03g0037230 OsLaMu_03g0037230.01 Chr03 35511499 35516596 - NAM
CDS seq

atggctcctgctgctaagagaaatttgggtaaagcacctattgtagatgattctgatgaatctgattgtgatggagagctttatcgtcgtgaacttgatgatattatatatgaaatttttagaaaggaggttgttaaagatgttaagaaagaaatattgaatcgaaaatcttgttctcatgcttttcgttatgcgaaggtgaactacacatttgattttaatttgtatattgcttgttgttatgataataagctaaaggaggctgcaaagattgattcatcatttacaaggttttccaccaagtatttctgtcgagttatatctgcactttctccacatcagaaaactattattcagggtgctggttttcagaatttgcttgagtttaacagcaattatgttccaaataaatttgctacttggattgcaaaacatgtggattttaagacctcacaaataattttaagagacaaagtaatttcagttacaaagcagactgtttgtgacatttttggtttaccttctggtggcttggagtttggaaaggattttgaagctggaaaggaatacattctttcgatgtatgggcttagttgtttgccttcagtgaggttctttggagaccagttcattaaaaaggaacctttgacaaatgagaaagtgattacttcatttcttattgttgctttggtttgttttctttgcccgaattcttctatattgccaagcaccaagtacctcaccatttttcaagatgttaataatctgaggaattatgattggtccaaattcatatatgattggtcaatgaactacatgaagaagtttgtgaagactaacagcttgggaggatgtttgtacatgtgggctgtggtgtaccttgacaatgttgaatttggtgataacaatgtttcaaatgaaattccacgtatttgtgtttggaaaagtgacatgatccatgcttattctgagtttgataaaattgatgatgacacttttggtcttaggcctctaagggattttaaatctacttgctatttccagcctcaaccttgtgatgaaagaaggatttcttttcagcagaaacttgactgtgctcttcagaatatgttgccagtttacatgaaagagaaaatatgttctatgtttgatagtcattgcacgtcacttcatactattgatgattcatcttgtggagatcttttgatttctgttcttgctatgattggtgaagctagctgtaatgaatcagatcaaaatgttgtaattgaggaaaatgtaattgagaatgttggcacttctaaagctgatgatgacattggtatttcttctgctggtattagtgctttttattttgttaatgcgttcgttttatatgcagaagttcatgtgcctaatgataatgtgttacctcattctcctattcataatgcttttcatggaaatgaagatgcttttgtttctaaatctgctgttgaacttaatgattcaagacaatgtgatgatgatctgaattttgttacccctcaagttggtaatgctaatcattccaaacagtctgttgatgatcttttggatggttctggaattgctgctgcagctgctgctattcatcgtgttgcaaaaaaatttagatcaagatttaatgattatgggaatgtggaaaatatctttaatcagtcaaggcccttatttagtttgctagattctgaagatgatgttagtgattatgaacatgttttctcagttcagaatgaagatgaaggctctgaaaatgtttccccttcttcaacccaaccttttatttcttttcaatcactccctgaaactccagacaatgatacttgcaacactgtcattaatgaaaaccctgaaactagtgcagcacataattctcagaattcgaacaagaggctttttaaagatgttacaaattctcctgatgttgtttgtttgggtgaaaataaaatttgtgattcatcaaaaagaatgtgtgttaaagctgaacagttatataattcaacaaatcaactgaacaagtacattcgtggaatgagttcttctggcggaaagcttcctgtacatggtccaagaagggttttagttcctgctaggcatgcttctgatccttttgtcttttctccaaggcgtcgttttacagtttctgatcaagagaatagatattatattgcaatttgtcgtctttcagataattcaaagtggcagagttactatgcagttgatattgacaatgttaaagcaaagttctacagttttggtcattccctcaagaagaattgtattgtgtcaccttatgtcatttcagtcttctgccgtgttttgtttcaagatagtcatccatcaaagtctaaaagaaactactttttTccatcaattggtgctgaattgattaatgatataagtgataaaggactggaaaaggttaagaagtcattcgaaggagctaccaatgctagaaaattgcatctttgtgacatgttatattttcctattctacatcttcagcattggtttctattcattgtggatttaaaggatagaatgcttgtcatactagattgtgtatatcatgaaggagatgatttctatgaacctattatgactcaattgataaataatctccagactttttgggacaaatttgaatgctctccaatgaattttagcaatttcaaattgaagtttccatctgttccagcccatatttctagtgcggattctgggatttttgttatgaaaagcatggaattgtggtctccaagagttattctgcaaaatgaattctcaaatgacaatatcagtaacattcgagttcagtatgcaaatagaattttctttcatcctagcaacaagcttttaagtactgaagttgaagatgtagttctcaattggtttgaccctgctaagtttccacgtgttgatactcctggtgctgcttga

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Protein seq

MAPAAKRNLGKAPIVDDSDESDCDGELYRRELDDIIYEIFRKEVVKDVKKEILNRKSCSHAFRYAKVNYTFDFNLYIACCYDNKLKEAAKIDSSFTRFSTKYFCRVISALSPHQKTIIQGAGFQNLLEFNSNYVPNKFATWIAKHVDFKTSQIILRDKVISVTKQTVCDIFGLPSGGLEFGKDFEAGKEYILSMYGLSCLPSVRFFGDQFIKKEPLTNEKVITSFLIVALVCFLCPNSSILPSTKYLTIFQDVNNLRNYDWSKFIYDWSMNYMKKFVKTNSLGGCLYMWAVVYLDNVEFGDNNVSNEIPRICVWKSDMIHAYSEFDKIDDDTFGLRPLRDFKSTCYFQPQPCDERRISFQQKLDCALQNMLPVYMKEKICSMFDSHCTSLHTIDDSSCGDLLISVLAMIGEASCNESDQNVVIEENVIENVGTSKADDDIGISSAGISAFYFVNAFVLYAEVHVPNDNVLPHSPIHNAFHGNEDAFVSKSAVELNDSRQCDDDLNFVTPQVGNANHSKQSVDDLLDGSGIAAAAAAIHRVAKKFRSRFNDYGNVENIFNQSRPLFSLLDSEDDVSDYEHVFSVQNEDEGSENVSPSSTQPFISFQSLPETPDNDTCNTVINENPETSAAHNSQNSNKRLFKDVTNSPDVVCLGENKICDSSKRMCVKAEQLYNSTNQLNKYIRGMSSSGGKLPVHGPRRVLVPARHASDPFVFSPRRRFTVSDQENRYYIAICRLSDNSKWQSYYAVDIDNVKAKFYSFGHSLKKNCIVSPYVISVFCRVLFQDSHPSKSKRNYFFPSIGAELINDISDKGLEKVKKSFEGATNARKLHLCDMLYFPILHLQHWFLFIVDLKDRMLVILDCVYHEGDDFYEPIMTQLINNLQTFWDKFECSPMNFSNFKLKFPSVPAHISSADSGIFVMKSMELWSPRVILQNEFSNDNISNIRVQYANRIFFHPSNKLLSTEVEDVVLNWFDPAKFPRVDTPGAA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g42954 SBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0018830 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0021670 RBH 0.0 0.0 0.213992
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0018690 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0018740 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0020950 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0365700 SBH 0 0.0056075 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0020390 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0562600 RBH 0 0.004826 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0037540 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0037550 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0016320 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0021170 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G016080 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0016030 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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