Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_01g0028670 | OGI:01002250 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr01:29623436-29647272 | ||||||||
| Gene Symbol | C10728, OsChib3a, Chib3a, OsPR31, PR31, PR8, WAK10, OsWAK10, - | ||||||||||
| DNA seq | atggttctcccaccgcgtttgctccccttcttcctcctcatcggcgtcctttcccatggctcgcctctcgcacccacttacaacacttccatttgctccaaatcatacgagtgtggaggcgtcaatatctcctaccctttctatctttccaacgcaatcggcggaacctacggttacgctcccttctcttgcggctacaccgatctggatatcacttgcagctgggacgggaggaaggagactcctactatccaactcaacggaaacaactacaccgtcctggacatcatctacgacagttacatcatcgtgctcgcggacaccgatgcgctcggcggcggcagctgccccagagtgcgccacaacgtcaccttcggccaggcctacgagtggcttcaatacaccggccccagtgacaacctcaccttcttcttcggctgcaaccttctaccactaccaccaatggatccagggctgactcgttttgcagacaagtaccaaatcaactgcaaagacttcagcaacgggcctaacggtggagattcatttgtgttcacctccggcgagcttgatccaaaaacagagtccgaattggacaggcgctgcagccagatcatcgtcgtgccggtaaatgggactatacttaatttaagtaaccagagtgcgctgccaagtggtgaatacggtcaagtgcttaagaaggggttcgagctggcatggacctcaaggaaagatgaacaatgctaccagtgcgagcgattccagggacagtgtgcctacagccagaaccggatattccaaggatgcttgtgcgctgatgggaaggtgagcagccaggattgcagaaacagcggaatcaacagtaagtcctgcaaatttgatttttttttagaactttgtaacaatatcaaaccaactattagtcacttacttgaaatatcatccaaacgtccaagtgcatgacacctccgtcatttgcttatactttgtagacccctaaaatcgtatgtatctttcccgttcagatgcagtaatccaaaaaggaaattatcccgtacaaaagaagtgtaaaatccgtcttgagcattatgtggacgtcgatacgcaccgtgtctcgacggagcaaaatggaagaccgtagtggccctgactagaccccgtttcgagtactaatcttgccatgtaacgtgatgtaccagtaactcattcatcttccacgaaacctgccaaacaactgtaccagctctctgcttactagtaaacgggcgggcggggcactaagcatcaaatcatctaaccattgttcaaaaccaaactgtttgttcatgctgacttcgatctctagctagccatgcttctctcgctgtgtctccggctgctgccgctcctcctcgtcttggttgccgcttcccacggcgatgcttccggtgatacctacgacacctcgatttgcctggagaaaccaaccacctgcgggaacgtcagtatcagctacccgttctacttttctgataagacgagagatatcagcgggtccagcaactcatactgcggataccccggcttggcgatcgattgcgacgacgcgcagcccatcctgcaactcaacggtgccgagaagtacaaggttaactacatcaactacgggagcatcgccaacgtgtccctggtcgatcaggaggtcgtcgacgacagcagcggctgcccaagagtcgatcacaacgtgaccttcgcacagggctcatggctgttcttccctgctggcatgtcgttggattacctcgtcttctttctcggctgctccttcccgaatctcttcctcccaccggaaaacatcgacccgatcacctgcagctttatcggtctcactggacagtcctacgtgcttccgaaggatcaagtgccgcctgggaactggtcgcagttttgccagaaaacctacgaagttcctgtgttcaaatatcaaccgatggacccaaaaggcgacgcatggaggaagggtggatatggccaggttcttcgtcagggattcccgttgtcattgaacgatagcatgaggcccacctattgtagccagtgcgaggaatccaatgggaggtgtggtttcagccaagccggggaattcgtgagctgcttgtgcccaaatggaagagtgcgctatctcaggtgcagtgccagcaacctaaccggtgagccatcggaggattgtactaccctcttctcttcttgtttcttttttcctcttttgaaatcgcccgaactttattggtccaggatttaggtgttttcgaaggtgtggattttattttttttcacgagaagagtgttatgcaggtcaatacagggtataatggtgtcatggtctcatggatctgcatggctgcatcaaaggctacatgcaaacttagtccctgtgtacttcccaaacaaaatttttcaccctgtcacatcgaatgtttggacacatgcataaagtattaaatatggacaaaaagaaaaactaattacacatattatgtgtaaattgcgagacaatcttttaagccttattgcgccatgatttgataatgtggtgctacagtaaaaaaaagttgctaatgacggattgattaggcttaataaattcgtctcgcagtttccaggcggaatttgtaatttgttttgttattagtctacgtttaatacttcaaatgtgtatccgtatatccgatgcgacacgcaaaaaattttcgttccctaactaaacaagcccttagagaaaaccttttagctagtttatgggaataagcatccccggactccgttccccctaccaggcatttgggccaggacagtggaagcctagccccgggccagcccttgatataccattgccagcaacaatttacagagtatatgttaccaatcctaaatgtgaaaaactattcatacgaaagtgtgttgtcagtatagggcaagcaacatcttgggaaaaaagtatagtgcaaataatgtaagtatgcaattatttattaataataacttcatatttaatctatttacaagaatttctggttgaatattgcaggagattcaagcctagagaggagaaaaaaacattgtaagagactactctatctctatatggttcttatttgcgtccatatagattcactctggccatgtgtttttaaaatgattgcgtccacaatctgttaagacgacagaaaaatttgtgctatacaaactcgaaatctgccatggaaattcaaaatgaattttatgcattatctatgcctttatgaactctgtacatgctttgctcctatctagccaaatcttcatgcctctatcagtttctggctatgctgtagtgatttaatggataaactccacagcaaaactagaaatttgcattccgttctgatgccttccccctcccaaattatctacatgcagatataatagcaggcacctcaaccgtccttttgctatgtttactttcctttgcgtgtttgttcagtctgaagaagtataggcacagaaggatttcaaagggaacaccaaggattgagtccttcctacaaaggaatggaaccttacatccaaagagatacacttacacagaagtaaataggatgacaaaatcttttgctgaaaagctaggtcacggtggatttggtgctgtttacaaaggcaacctatctgatgaccgtcaggtagcagtcaagatgctaaaggactccaagggtgacggtgaagaattcatcaatgaggttgctagtattagtagaacttctcacgtcaacgtggtgtctctgttaggattttgcttgcatcgatccaaaagggctctgatctatgagtatatgccaaatggttcacttgaaagatatgctttccgcaagaactccaaaggcgaactttcattaacttgggagaagttatttgatgtagcagttggaattgcccgagggcttgagtatcttcaccgtggatgcagtacccgcattgtgcatttcgatattaaaccccacaacattctactagatcaagaattctgccctaagatctcagattttggaatggctaagctttgtgctaacaaagagagtatcgtctccattgctggtgcaagaggaacaataggctatattgccccggaggtctattcaaagcagtttggagcaataactagcaagtctgatgtctatagctatggaatgatgatccttgagatggttggggcaagggagaggaacatagatgccaatagtgaatctagtagccactatttcccacaatggatttacgaacatctagatgaatactgcatcagttcttctgagattgatggtgagaccacagagcttgtaagaaagatggtagtggttgcactgtggtgcatacaagtagttccaactaaccgcccaacaatgactagagtcgttgaaatgctagaaggtagcacgagcggtctggaattgccaccaaaagtgctattgagctggtaagcatccacaaatttcgattgaataagcattattgctcacttcttccagtgttgtacaactgcaaatactatttagcagttacaaaatgtaagaagagatttggaatgtgaaaccaaactcactacaatgtcgaccctcttttgcccagttatactctagattgactgtacgttacaaattcatcggttggctatggtttcaaacagttccaatttctatagaatactgtataaattagaaaccgcaactaaaattcccatctgcgctgcaatgcggaactatatggatacttgaactgtaaactggacattgcactttcaaagtcagagcttacctgaagtcagagtagtagttcagacttcagatcttagaagttcaccgtctgccgtcgcccgaaccggttccggagtcaaggcccggcgaccgcggcggctcaggatgcgacgagcgcagtgaaggctagcgcggctggctgcatacggagggtcgagggagatgggctggtat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| CDS seq | atggttctcccaccgcgtttgctccccttcttcctcctcatcggcgtcctttcccatggctcgcctctcgcacccacttacaacacttccatttgctccaaatcatacgagtgtggaggcgtcaatatctcctaccctttctatctttccaacgcaatcggcggaacctacggttacgctcccttctcttgcggctacaccgatctggatatcacttgcagctgggacgggaggaaggagactcctactatccaactcaacggaaacaactacaccgtcctggacatcatctacgacagttacatcatcgtgctcgcggacaccgatgcgctcggcggcggcagctgccccagagtgcgccacaacgtcaccttcggccaggcctacgagtggcttcaatacaccggccccagtgacaacctcaccttcttcttcggctgcaaccttctaccactaccaccaatggatccagggctgactcgttttgcagacaagtaccaaatcaactgcaaagacttcagcaacgggcctaacggtggagattcatttgtgttcacctccggcgagcttgatccaaaaacagagtccgaattggacaggcgctgcagccagatcatcgtcgtgccggtaaatgggactatacttaatttaagtaaccagagtgcgctgccaagtggtgaatacggtcaagtgcttaagaaggggttcgagctggcatggacctcaaggaaagatgaacaatgctaccagtgcgagcgattccagggacagtgtgcctacagccagaaccggatattccaaggatgcttgtgcgctgatgggaagcaatcccaggggcactgctcctaccgccagaacagggcgttcctaggttgcttgtgctccgacgggaaggtgagcaccaaggattgcagaaacagcggtgccagcaactcgtctgcattaaccatgcttctctcgctgtgtctccggctgctgccgctcctcctcgtcttggttaccgcttcccatggcgatgcttccggtgatacctacgacacctcgatttgcctggagaaaccaaccacctgcgggaacgtcagtatcagctacccgttctacttttctgataagacgagagatatcagcgggtccagcaactcatactgcggataccccggcttggcgatcgattgcgacgacgcgcagcccatcctgcaactcaacggtgccgagaagtacaaggttaactacatcaactacgggagcatcgccaacgtgtccctggtcgatcaggaggtcgtcgacgacagcagcggctgcccaagagtcgatcacaacgtgaccttcgcacagggctcatggctgttcttccctgctggcatgtcgttggattacctcgtcttctttctcggctgctccttcccgaatctcttcctcccaccggaaaacaccgatccgatcacctgcagctttatcggtctcactggacagtcgtatgtgcttccgaaggatcaagtgccgcctgggaactggccacggttttgccagaaaacctacgaagttcctgtggtcaaatatcaaccgatgaacccaaaaggtgacgcatggaggaagggtggatacgggcaggttcttcttcagggcttcccgttgtcagtgaacgatagcaggaggccccccaattgtacgcagtgcgaggagtccaaaggacggtgcggttttagccaagccggggaattcgtgagctgcttgtgcccaaatggaagaatgcgctctctcaggagattcaagcctagagaggagaaaaaaacttttctgaagaagtataggcacaggaggatttcaaagggaacaccaaggattgagtccttcctacaaaggaatggaaccctacatccaaagagatacacttacacagaagtaaaaaggatgacaaaatcttttgctgaaaagctaggtcacggtggatttggtgctgtttacaaaggcaacctatctgatggccgtcaggtagcagtcaagatgttaaaggactccaagggtgacggcgaagaattcatcaatgaggttgctagcattagtagaacttctcacgtcaacgtggtgtctctgttaggattttgcttgcatcgatccaaaagggctctgatctatgagtatatgccaaatggttcacttgaaagatatgctttccgcaagaactccaaaggcgaactttcattaacttgggagaagttatttgatgtagcagttggaattgcccgagggcttgagtatcttcaccgtggatgcagtacccgcattgtgcatttcgatattaaaccccacaacattctactagatcaagaattctgccctaagatctcagattttggaatggctaagctttatgaatactgcatcagttcttctgagattgatggtgagaccacagagcttgtaagaaagatgatagtggttgcactttggtgcatacaagtagttccaactaaccgcccaacaatgactagagtcgttgaaatgctagaaggtagcacgagcggtctggaattgccaccaaaactctgcttcttggcgtccgtgctcttgtcgatgtccaccgtcgacctagcgatgtcgccggcgtcggccggagtcaacatcgccgtctactggggccagaacggcagcgagggcacgctcggggagacatgcggcaccggcctctacgcgtacgtcaacctcgccttcctctccacgttcggcgccggccgcgccccggtcctcaacctggccgaccactgcgacgccccgtcggggacctgcgcgtccctcgccgccgacatcgcgtcctgccaggccgccggcgtcaaggtgctcctcagcatcggcggcggcgcgcttgggtacaacctgtcgtcgccctccgacgcgcgggacctggccgcgtacctctgggacaacttcctcggcggtgaaggcgccaccggcgcgccccgcccgctcggcgacgccgtgctcgacggcgtcgacttcgacatagagtcaccctccaggttctacgacgacctcgccaggaacctggcgtcgctgtacacaagggcgccgcggccgccgcggtggggcaagacgacgtacctgctcaccgccgcgccgcagtgcccgtacccggacgcgtccctcgccgcggcgctcgccacggggctgttcgaccacgtgtgggtgcagttctacaacaacccgccgtgccagtacgccgccgcgccaggggatgcgagcgcgctgcggagcgcgtggcagcagtggacggccggcttgccggcgtcgaccgtgttcctggggctgccggcgtcgctggaagctgcgaacagcgggtttgtcgacgcggacacgctcgcgtcgcaggtgctgccgatggtggaaggcgcggccaactacggcggcatcatgctgtggagccgctcctacgacaaggactccagcttcagtgggagaatatatataatagcaggagttttcgccggcgtactactactgttcctgcttcttataacctatttcctgtgccataaaaaacaccacggccacgggcagcatcctcctgtacaagaattgacgacccctccaaagccagagccatctcagaaaaaacagcgagctcaacatctgaaaagatacagctattcggaagttgaaagaatgaccaaaacctttgctcacaagataggccaaggcaactatggtgatgtctacaaaggcaacctccgtgatggccatcagatagtggttaagttactgaagaattgcagaggtaatgacaaggagtttctgaacgaggttgccagcattggcacaatttcgcatgccaatgttgttcctctgctggggttctgcttgcaagggacagcaagagctctaatctacgagtacatgccaaatggttcccttgaaacctatgctttcagcaatgatgactctatagaggagaattattattcccttcggatatactgggagaaactatatgaaattgcaattggtgttgcgagagggctagagtttctccacggaagcggcaatgcgaacatcatgcatctcaaaatcaagccaagaaacattctactggatcaggagctatgtccaaagatatctgattttggagtagcaaacctgtgcttgtggaaagagagcaagaaatccgctcaaaatgcgagggggagagatggctatgatgcacctgaagtagtgtccaggaaattcggagcagtcagcagcaagtctgatgtctacagctatggcgtgatggtccttgagatgattagagcaaaaagacgtattaatgttggtgctgacactaccactaagtattttgctcagtggctgtatgatcacttggatcagttctgcaatagtatttctgacatcagtgatgagacaagagagtctgtaaggaggatcatcatagttggtctgtggtgcatacaagcggcacctgcaaatcgaccttcgatgagcagagtcgtcgagatgttggaaagtagcagcacaaacatggatttcccaagaaaatctatcgagtag
More
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| Protein seq | MVLPPRLLPFFLLIGVLSHGSPLAPTYNTSICSKSYECGGVNISYPFYLSNAIGGTYGYAPFSCGYTDLDITCSWDGRKETPTIQLNGNNYTVLDIIYDSYIIVLADTDALGGGSCPRVRHNVTFGQAYEWLQYTGPSDNLTFFFGCNLLPLPPMDPGLTRFADKYQINCKDFSNGPNGGDSFVFTSGELDPKTESELDRRCSQIIVVPVNGTILNLSNQSALPSGEYGQVLKKGFELAWTSRKDEQCYQCERFQGQCAYSQNRIFQGCLCADGKQSQGHCSYRQNRAFLGCLCSDGKVSTKDCRNSGASNSSALTMLLSLCLRLLPLLLVLVTASHGDASGDTYDTSICLEKPTTCGNVSISYPFYFSDKTRDISGSSNSYCGYPGLAIDCDDAQPILQLNGAEKYKVNYINYGSIANVSLVDQEVVDDSSGCPRVDHNVTFAQGSWLFFPAGMSLDYLVFFLGCSFPNLFLPPENTDPITCSFIGLTGQSYVLPKDQVPPGNWPRFCQKTYEVPVVKYQPMNPKGDAWRKGGYGQVLLQGFPLSVNDSRRPPNCTQCEESKGRCGFSQAGEFVSCLCPNGRMRSLRRFKPREEKKTFLKKYRHRRISKGTPRIESFLQRNGTLHPKRYTYTEVKRMTKSFAEKLGHGGFGAVYKGNLSDGRQVAVKMLKDSKGDGEEFINEVASISRTSHVNVVSLLGFCLHRSKRALIYEYMPNGSLERYAFRKNSKGELSLTWEKLFDVAVGIARGLEYLHRGCSTRIVHFDIKPHNILLDQEFCPKISDFGMAKLYEYCISSSEIDGETTELVRKMIVVALWCIQVVPTNRPTMTRVVEMLEGSTSGLELPPKLCFLASVLLSMSTVDLAMSPASAGVNIAVYWGQNGSEGTLGETCGTGLYAYVNLAFLSTFGAGRAPVLNLADHCDAPSGTCASLAADIASCQAAGVKVLLSIGGGALGYNLSSPSDARDLAAYLWDNFLGGEGATGAPRPLGDAVLDGVDFDIESPSRFYDDLARNLASLYTRAPRPPRWGKTTYLLTAAPQCPYPDASLAAALATGLFDHVWVQFYNNPPCQYAAAPGDASALRSAWQQWTAGLPASTVFLGLPASLEAANSGFVDADTLASQVLPMVEGAANYGGIMLWSRSYDKDSSFSGRIYIIAGVFAGVLLLFLLLITYFLCHKKHHGHGQHPPVQELTTPPKPEPSQKKQRAQHLKRYSYSEVERMTKTFAHKIGQGNYGDVYKGNLRDGHQIVVKLLKNCRGNDKEFLNEVASIGTISHANVVPLLGFCLQGTARALIYEYMPNGSLETYAFSNDDSIEENYYSLRIYWEKLYEIAIGVARGLEFLHGSGNANIMHLKIKPRNILLDQELCPKISDFGVANLCLWKESKKSAQNARGRDGYDAPEVVSRKFGAVSSKSDVYSYGVMVLEMIRAKRRINVGADTTTKYFAQWLYDHLDQFCNSISDISDETRESVRRIIIVGLWCIQAAPANRPSMSRVVEMLESSSTNMDFPRKSIE |
||||||||||
| Function | Acidic endochitinase SE2 [UniProtKB/Swiss-Prot:P36910] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_01g0028670 | OsPr106_01g0028670.01 | Chr01 | 29623436 | 29647272 | + | NAM | ||
| CDS seq | atggttctcccaccgcgtttgctccccttcttcctcctcatcggcgtcctttcccatggctcgcctctcgcacccacttacaacacttccatttgctccaaatcatacgagtgtggaggcgtcaatatctcctaccctttctatctttccaacgcaatcggcggaacctacggttacgctcccttctcttgcggctacaccgatctggatatcacttgcagctgggacgggaggaaggagactcctactatccaactcaacggaaacaactacaccgtcctggacatcatctacgacagttacatcatcgtgctcgcggacaccgatgcgctcggcggcggcagctgccccagagtgcgccacaacgtcaccttcggccaggcctacgagtggcttcaatacaccggccccagtgacaacctcaccttcttcttcggctgcaaccttctaccactaccaccaatggatccagggctgactcgttttgcagacaagtaccaaatcaactgcaaagacttcagcaacgggcctaacggtggagattcatttgtgttcacctccggcgagcttgatccaaaaacagagtccgaattggacaggcgctgcagccagatcatcgtcgtgccggtaaatgggactatacttaatttaagtaaccagagtgcgctgccaagtggtgaatacggtcaagtgcttaagaaggggttcgagctggcatggacctcaaggaaagatgaacaatgctaccagtgcgagcgattccagggacagtgtgcctacagccagaaccggatattccaaggatgcttgtgcgctgatgggaagcaatcccaggggcactgctcctaccgccagaacagggcgttcctaggttgcttgtgctccgacgggaaggtgagcaccaaggattgcagaaacagcggtgccagcaactcgtctgcattaaccatgcttctctcgctgtgtctccggctgctgccgctcctcctcgtcttggttaccgcttcccatggcgatgcttccggtgatacctacgacacctcgatttgcctggagaaaccaaccacctgcgggaacgtcagtatcagctacccgttctacttttctgataagacgagagatatcagcgggtccagcaactcatactgcggataccccggcttggcgatcgattgcgacgacgcgcagcccatcctgcaactcaacggtgccgagaagtacaaggttaactacatcaactacgggagcatcgccaacgtgtccctggtcgatcaggaggtcgtcgacgacagcagcggctgcccaagagtcgatcacaacgtgaccttcgcacagggctcatggctgttcttccctgctggcatgtcgttggattacctcgtcttctttctcggctgctccttcccgaatctcttcctcccaccggaaaacaccgatccgatcacctgcagctttatcggtctcactggacagtcgtatgtgcttccgaaggatcaagtgccgcctgggaactggccacggttttgccagaaaacctacgaagttcctgtggtcaaatatcaaccgatgaacccaaaaggtgacgcatggaggaagggtggatacgggcaggttcttcttcagggcttcccgttgtcagtgaacgatagcaggaggccccccaattgtacgcagtgcgaggagtccaaaggacggtgcggttttagccaagccggggaattcgtgagctgcttgtgcccaaatggaagaatgcgctctctcaggagattcaagcctagagaggagaaaaaaacttttctgaagaagtataggcacaggaggatttcaaagggaacaccaaggattgagtccttcctacaaaggaatggaaccctacatccaaagagatacacttacacagaagtaaaaaggatgacaaaatcttttgctgaaaagctaggtcacggtggatttggtgctgtttacaaaggcaacctatctgatggccgtcaggtagcagtcaagatgttaaaggactccaagggtgacggcgaagaattcatcaatgaggttgctagcattagtagaacttctcacgtcaacgtggtgtctctgttaggattttgcttgcatcgatccaaaagggctctgatctatgagtatatgccaaatggttcacttgaaagatatgctttccgcaagaactccaaaggcgaactttcattaacttgggagaagttatttgatgtagcagttggaattgcccgagggcttgagtatcttcaccgtggatgcagtacccgcattgtgcatttcgatattaaaccccacaacattctactagatcaagaattctgccctaagatctcagattttggaatggctaagctttatgaatactgcatcagttcttctgagattgatggtgagaccacagagcttgtaagaaagatgatagtggttgcactttggtgcatacaagtagttccaactaaccgcccaacaatgactagagtcgttgaaatgctagaaggtagcacgagcggtctggaattgccaccaaaactctgcttcttggcgtccgtgctcttgtcgatgtccaccgtcgacctagcgatgtcgccggcgtcggccggagtcaacatcgccgtctactggggccagaacggcagcgagggcacgctcggggagacatgcggcaccggcctctacgcgtacgtcaacctcgccttcctctccacgttcggcgccggccgcgccccggtcctcaacctggccgaccactgcgacgccccgtcggggacctgcgcgtccctcgccgccgacatcgcgtcctgccaggccgccggcgtcaaggtgctcctcagcatcggcggcggcgcgcttgggtacaacctgtcgtcgccctccgacgcgcgggacctggccgcgtacctctgggacaacttcctcggcggtgaaggcgccaccggcgcgccccgcccgctcggcgacgccgtgctcgacggcgtcgacttcgacatagagtcaccctccaggttctacgacgacctcgccaggaacctggcgtcgctgtacacaagggcgccgcggccgccgcggtggggcaagacgacgtacctgctcaccgccgcgccgcagtgcccgtacccggacgcgtccctcgccgcggcgctcgccacggggctgttcgaccacgtgtgggtgcagttctacaacaacccgccgtgccagtacgccgccgcgccaggggatgcgagcgcgctgcggagcgcgtggcagcagtggacggccggcttgccggcgtcgaccgtgttcctggggctgccggcgtcgctggaagctgcgaacagcgggtttgtcgacgcggacacgctcgcgtcgcaggtgctgccgatggtggaaggcgcggccaactacggcggcatcatgctgtggagccgctcctacgacaaggactccagcttcagtgggagaatatatataatagcaggagttttcgccggcgtactactactgttcctgcttcttataacctatttcctgtgccataaaaaacaccacggccacgggcagcatcctcctgtacaagaattgacgacccctccaaagccagagccatctcagaaaaaacagcgagctcaacatctgaaaagatacagctattcggaagttgaaagaatgaccaaaacctttgctcacaagataggccaaggcaactatggtgatgtctacaaaggcaacctccgtgatggccatcagatagtggttaagttactgaagaattgcagaggtaatgacaaggagtttctgaacgaggttgccagcattggcacaatttcgcatgccaatgttgttcctctgctggggttctgcttgcaagggacagcaagagctctaatctacgagtacatgccaaatggttcccttgaaacctatgctttcagcaatgatgactctatagaggagaattattattcccttcggatatactgggagaaactatatgaaattgcaattggtgttgcgagagggctagagtttctccacggaagcggcaatgcgaacatcatgcatctcaaaatcaagccaagaaacattctactggatcaggagctatgtccaaagatatctgattttggagtagcaaacctgtgcttgtggaaagagagcaagaaatccgctcaaaatgcgagggggagagatggctatgatgcacctgaagtagtgtccaggaaattcggagcagtcagcagcaagtctgatgtctacagctatggcgtgatggtccttgagatgattagagcaaaaagacgtattaatgttggtgctgacactaccactaagtattttgctcagtggctgtatgatcacttggatcagttctgcaatagtatttctgacatcagtgatgagacaagagagtctgtaaggaggatcatcatagttggtctgtggtgcatacaagcggcacctgcaaatcgaccttcgatgagcagagtcgtcgagatgttggaaagtagcagcacaaacatggatttcccaagaaaatctatcgagtag
More
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| Protein seq | MVLPPRLLPFFLLIGVLSHGSPLAPTYNTSICSKSYECGGVNISYPFYLSNAIGGTYGYAPFSCGYTDLDITCSWDGRKETPTIQLNGNNYTVLDIIYDSYIIVLADTDALGGGSCPRVRHNVTFGQAYEWLQYTGPSDNLTFFFGCNLLPLPPMDPGLTRFADKYQINCKDFSNGPNGGDSFVFTSGELDPKTESELDRRCSQIIVVPVNGTILNLSNQSALPSGEYGQVLKKGFELAWTSRKDEQCYQCERFQGQCAYSQNRIFQGCLCADGKQSQGHCSYRQNRAFLGCLCSDGKVSTKDCRNSGASNSSALTMLLSLCLRLLPLLLVLVTASHGDASGDTYDTSICLEKPTTCGNVSISYPFYFSDKTRDISGSSNSYCGYPGLAIDCDDAQPILQLNGAEKYKVNYINYGSIANVSLVDQEVVDDSSGCPRVDHNVTFAQGSWLFFPAGMSLDYLVFFLGCSFPNLFLPPENTDPITCSFIGLTGQSYVLPKDQVPPGNWPRFCQKTYEVPVVKYQPMNPKGDAWRKGGYGQVLLQGFPLSVNDSRRPPNCTQCEESKGRCGFSQAGEFVSCLCPNGRMRSLRRFKPREEKKTFLKKYRHRRISKGTPRIESFLQRNGTLHPKRYTYTEVKRMTKSFAEKLGHGGFGAVYKGNLSDGRQVAVKMLKDSKGDGEEFINEVASISRTSHVNVVSLLGFCLHRSKRALIYEYMPNGSLERYAFRKNSKGELSLTWEKLFDVAVGIARGLEYLHRGCSTRIVHFDIKPHNILLDQEFCPKISDFGMAKLYEYCISSSEIDGETTELVRKMIVVALWCIQVVPTNRPTMTRVVEMLEGSTSGLELPPKLCFLASVLLSMSTVDLAMSPASAGVNIAVYWGQNGSEGTLGETCGTGLYAYVNLAFLSTFGAGRAPVLNLADHCDAPSGTCASLAADIASCQAAGVKVLLSIGGGALGYNLSSPSDARDLAAYLWDNFLGGEGATGAPRPLGDAVLDGVDFDIESPSRFYDDLARNLASLYTRAPRPPRWGKTTYLLTAAPQCPYPDASLAAALATGLFDHVWVQFYNNPPCQYAAAPGDASALRSAWQQWTAGLPASTVFLGLPASLEAANSGFVDADTLASQVLPMVEGAANYGGIMLWSRSYDKDSSFSGRIYIIAGVFAGVLLLFLLLITYFLCHKKHHGHGQHPPVQELTTPPKPEPSQKKQRAQHLKRYSYSEVERMTKTFAHKIGQGNYGDVYKGNLRDGHQIVVKLLKNCRGNDKEFLNEVASIGTISHANVVPLLGFCLQGTARALIYEYMPNGSLETYAFSNDDSIEENYYSLRIYWEKLYEIAIGVARGLEFLHGSGNANIMHLKIKPRNILLDQELCPKISDFGVANLCLWKESKKSAQNARGRDGYDAPEVVSRKFGAVSSKSDVYSYGVMVLEMIRAKRRINVGADTTTKYFAQWLYDHLDQFCNSISDISDETRESVRRIIIVGLWCIQAAPANRPSMSRVVEMLESSSTNMDFPRKSIE
More
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.398517 | 0.733760 | 3.513491 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0691050 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g49614 | RBH | 0.264194 | 0.165643 | 0.203216 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0691050 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0029790 | SBH | 0.000000 | 1.764930 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0029400 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0029770 | RBH | 0.266605 | 0.000000 | 0.142570 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0028990 | SBH | 0.081408 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0025780 | RBH | 0.896365 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0473400 | RBH | 0.547993 | 8.016478 | 0.2487315 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028410 | SBH | 0.043897 | 0.0 | 0.334089 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0462600 | RBH | 0.5395495 | 0.9057255 | 0.022464 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0028680 | SBH | 0.064538 | 0.374204 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0028570 | RBH | 0.235843 | 0.388253 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0028870 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0029020 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0028840 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029280 | SBH | 0.032010 | 0.338633 | 0.148234 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0028950 | RBH | 0.0 | 0.0 | 0.0 |
