Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0691050 | OGI:01002250 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:28536737-28537615 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGACCAAAACCTTTGCTCACAAGATAGGCCAAGGCAACTATGGTGATGTCTACAAAGGGAACCTCCGTGATGGCCGTCAGATAGTGGTTAAGTTACTGAAGAATTGCAGAGGTAATGACAAGGAGTTTCTGAACGAGGTTGCCAGCATTGGCACAATTTCGCATGTCAATGTTATTCCTCTGCTGGGGTTCTGCTTGCAAGGGACAGCAAGAGCTCTAATCTACGAGTACATGCCAAATGGTTCCCTTGAAAGCTATGCTTTCAGCAATGATGACTCTATAGAGGAGAATTATTCCCTTTGGATATATTGGGAGAAATTATATGAAATTGCAATTGGTGTTGCGAGAGGACTAGAGTTTCTCCACGGAAGCGGCAATGCGAACATTATGCATCTCAAAATCAAGCCAAGAAACATTCTACTGGATCAGGAGCTATGTCCAAAGATATCTGATTTTGGAGTAGCAAACCTGTGCTTGTGGAAAGAGAGCAAGAAATCCGCTCAAAATGCGAGGGGGAGAGATAGCTATGATGCACCTGAAGTAGTGTCCACGAAATTCGGAGCAGTCAGCAGCAAGTCTGATGTCTACAGCTATGGCGTGATGGTCCTTGAGATGATTAGAGCAAAAAGACGTATTAATGTTGGTGCTGACACTACCACTAAGTATTTTGCTCAGTGGCTGTATGATCACTTAGATCAGTTCTGCAATAGTATTTCTGACATCAGTGATGAGACAAGAGAGTCTGTAAGGAGGATCATCATAGTTGGTCTGTGGTGCATACAAGCGGCACCTGCAAATCGACCTTCGATGAGCAGAGTCGTCAAGATGTTGGAAAGTAGCAGCACAAAGATGGATCTGCCAAGAAAATCTATCGAGTAG
More
|
||||||||||
| CDS seq | ATGACCAAAACCTTTGCTCACAAGATAGGCCAAGGCAACTATGGTGATGTCTACAAAGGGAACCTCCGTGATGGCCGTCAGATAGTGGTTAAGTTACTGAAGAATTGCAGAGGTAATGACAAGGAGTTTCTGAACGAGGTTGCCAGCATTGGCACAATTTCGCATGTCAATGTTATTCCTCTGCTGGGGTTCTGCTTGCAAGGGACAGCAAGAGCTCTAATCTACGAGTACATGCCAAATGGTTCCCTTGAAAGCTATGCTTTCAGCAATGATGACTCTATAGAGGAGAATTATTCCCTTTGGATATATTGGGAGAAATTATATGAAATTGCAATTGGTGTTGCGAGAGGACTAGAGTTTCTCCACGGAAGCGGCAATGCGAACATTATGCATCTCAAAATCAAGCCAAGAAACATTCTACTGGATCAGGAGCTATGTCCAAAGATATCTGATTTTGGAGTAGCAAACCTGTGCTTGTGGAAAGAGAGCAAGAAATCCGCTCAAAATGCGAGGGGGAGAGATAGCTATGATGCACCTGAAGTAGTGTCCACGAAATTCGGAGCAGTCAGCAGCAAGTCTGATGTCTACAGCTATGGCGTGATGGTCCTTGAGATGATTAGAGCAAAAAGACGTATTAATGTTGGTGCTGACACTACCACTAAGTATTTTGCTCAGTGGCTGTATGATCACTTAGATCAGTTCTGCAATAGTATTTCTGACATCAGTGATGAGACAAGAGAGTCTGTAAGGAGGATCATCATAGTTGGTCTGTGGTGCATACAAGCGGCACCTGCAAATCGACCTTCGATGAGCAGAGTCGTCAAGATGTTGGAAAGTAGCAGCACAAAGATGGATCTGCCAAGAAAATCTATCGAGTAG
More
|
||||||||||
| Protein seq | MTKTFAHKIGQGNYGDVYKGNLRDGRQIVVKLLKNCRGNDKEFLNEVASIGTISHVNVIPLLGFCLQGTARALIYEYMPNGSLESYAFSNDDSIEENYSLWIYWEKLYEIAIGVARGLEFLHGSGNANIMHLKIKPRNILLDQELCPKISDFGVANLCLWKESKKSAQNARGRDSYDAPEVVSTKFGAVSSKSDVYSYGVMVLEMIRAKRRINVGADTTTKYFAQWLYDHLDQFCNSISDISDETRESVRRIIIVGLWCIQAAPANRPSMSRVVKMLESSSTKMDLPRKSIE |
||||||||||
| Function | PR5-like receptor kinase [UniProtKB/Swiss-Prot:Q9FF29] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0691050 | OsNip_01t0691050-00 | Chr01 | 28536737 | 28537615 | + | RAP2018-11-26 | ||
| CDS seq | ATGACCAAAACCTTTGCTCACAAGATAGGCCAAGGCAACTATGGTGATGTCTACAAAGGGAACCTCCGTGATGGCCGTCAGATAGTGGTTAAGTTACTGAAGAATTGCAGAGGTAATGACAAGGAGTTTCTGAACGAGGTTGCCAGCATTGGCACAATTTCGCATGTCAATGTTATTCCTCTGCTGGGGTTCTGCTTGCAAGGGACAGCAAGAGCTCTAATCTACGAGTACATGCCAAATGGTTCCCTTGAAAGCTATGCTTTCAGCAATGATGACTCTATAGAGGAGAATTATTCCCTTTGGATATATTGGGAGAAATTATATGAAATTGCAATTGGTGTTGCGAGAGGACTAGAGTTTCTCCACGGAAGCGGCAATGCGAACATTATGCATCTCAAAATCAAGCCAAGAAACATTCTACTGGATCAGGAGCTATGTCCAAAGATATCTGATTTTGGAGTAGCAAACCTGTGCTTGTGGAAAGAGAGCAAGAAATCCGCTCAAAATGCGAGGGGGAGAGATAGCTATGATGCACCTGAAGTAGTGTCCACGAAATTCGGAGCAGTCAGCAGCAAGTCTGATGTCTACAGCTATGGCGTGATGGTCCTTGAGATGATTAGAGCAAAAAGACGTATTAATGTTGGTGCTGACACTACCACTAAGTATTTTGCTCAGTGGCTGTATGATCACTTAGATCAGTTCTGCAATAGTATTTCTGACATCAGTGATGAGACAAGAGAGTCTGTAAGGAGGATCATCATAGTTGGTCTGTGGTGCATACAAGCGGCACCTGCAAATCGACCTTCGATGAGCAGAGTCGTCAAGATGTTGGAAAGTAGCAGCACAAAGATGGATCTGCCAAGAAAATCTATCGAGTAG
More
|
|||||||
| Protein seq | MTKTFAHKIGQGNYGDVYKGNLRDGRQIVVKLLKNCRGNDKEFLNEVASIGTISHVNVIPLLGFCLQGTARALIYEYMPNGSLESYAFSNDDSIEENYSLWIYWEKLYEIAIGVARGLEFLHGSGNANIMHLKIKPRNILLDQELCPKISDFGVANLCLWKESKKSAQNARGRDSYDAPEVVSTKFGAVSSKSDVYSYGVMVLEMIRAKRRINVGADTTTKYFAQWLYDHLDQFCNSISDISDETRESVRRIIIVGLWCIQAAPANRPSMSRVVKMLESSSTKMDLPRKSIE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0550700 | SBH | 0.000000 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g49614 | SBH | 0.264194 | 0.165643 | 0.203216 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0691050 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0002590 | SBH | 0.146139 | 0.000000 | 0.280715 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001140 | SBH | 0.956421 | 0.000000 | 0.853077 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0002650 | SBH | 1.453925 | 0.0 | 1.284384 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0002480 | SBH | 0.008902 | 0.005864 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0028670 | RBH | 1.398517 | 0.733760 | 3.513491 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0473500 | RBH | 0 | 0.1089215 | 0.010814 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028430 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0462600 | SBH | 0.5395495 | 0.9057255 | 0.022464 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0028670 | SBH | 0.224244 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0028570 | RBH | 0.235843 | 0.388253 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0028870 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0002590 | SBH | 0.000000 | 0.000000 | 0.017706 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0002540 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029270 | SBH | 0.0 | 0.0 | 0.754148 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0028950 | SBH | 0.0 | 0.0 | 0.0 |
