Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_07g0635700 | OGI:07038620 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr07:26394117-26396756 | ||||||||
| Gene Symbol | CYP709C5, OsCYP709C5 | ||||||||||
| DNA seq | CAGCTCGTCGTCGTACGCTTCCTGTACGCATCTTCTTCCTCTCGATTTCCGGCCCTAATCGGGAACAGCAGCATCGATCTATCTCACACTCGCCCCGCGTGCGCGCAAATGGGTTACGGATGGGCGCTCGCCGCCGTGCTGGCGACGTGGTGCCTGCTCGACGCGCTGTCGCGCCTCGTGTGGCGGCCGCGCGCCGTGGCCGCGGCGCTGCGGCGGCAGGGCGTGCGCGGCCCCGGGTACAGGCTGCTCGTCGGGAGCCTCGGCGACATCAACAAGCTCCGCGCGGACGCCGCCGGCGCCGGCGGCGCCGCGGCGCTCGACGTCGCCTCCCACGACTTCATCCCCTTCGTCCAGCCTCAGTTCCGCCAATGGATCCCTCTCTACGGTAACATAACAATCAGAGCTGCAGCTAGCTATCGTCTTCGTCTGAATCCTATGTGATGTTATTGATTCTTTTTGTGTGCAGGGCGAGTGTTCTTGTACTGGTTTGGATGGACGCCGGACATGTGCGTGGCCGACGTCGAGGTGGCGAAGCAGGTGCTCTCGGACAGGACAGGGCTGTTCCCCAAGAACGTGACGACACCGATGCTGCTCAAGCTGTTCGGCAGGGGGCTCGTCCTGGCCAACGGCGACGAGTGGCAGCGACACAAGAAGGTCGTCCACCCCGCCTTCAACACGGACAAGCTCAAGGTACATTACATCACATCACATATTGCCTTCTTCTTGCTGACGCAGGACGCCATGGCTTGTAGTAAACTGAAAAATTGTTTGGTGTAAGATGATGACGGCGACAATGGCCGGCGTCGCACGGTCGATGGTGTCGAGGTGGGAGGAGAAGGTGGCGAGCCATGGCGGGAAGGTGGTGATCGAGCTGAGCAGCCAGTTCGAGGAGCTGACTGCGGACGTGATCTCTCACACGGCGTTCGGGAGCAGCTACGCGGAGGGGAAGCAGGTTTTCATGGCGATCAAGGAGCTCCAGTTCATCGCCTTCTCAAGCCTTCTCAGCGTCCAAATCCCAGGCTCCAGGTAGGTACAAACACTTTACCATGTCAAATTTCATCTGAACTGAAATAATTTGTTTGCAGGTATTTTCCAACCAAGAAGAATCTGAAAGTATGGAGGCTGGACAGGAAGGTGAGGAGTACGCTGATGCAGATAATCAGCAACAGACTCGCCGCCGCCGCGAAGGAGAAGGCCGGCGGCGGTGGCGGTGGCTACGGCGAGGACCTGCTCGGGCTGATGCTGGAGGCCAGCGCGCCACCGGAGCTGGGCACGAAGCGTCGTCAGCCGCCGGTGCTGAGCATGGACGAGATCATCGACGAGTGCAAGACCTTCTTCTTTGCCGGGCAGGAGACCACCTCGCACCTCCTCTCCTGGACCATGTTTCTTCTCAGCACGCACCCGGACTGGCAGGACAAGCTCCGGGAAGAAGCCGTGAGAGAGTGCGCCGGCGCCGGCGCCGGGGACGACGACGACCAGCTCCCCACCTACGACATGCTCGGCAAGCTGAAGCTGGTAGGAATGCAATTTGTTAAGTTAAATTTGAACTTACATGTCGTGGAGTGATATATTTACATATTAATCTATCTTGTCTATTTTTTTATTTTTTTTCATAACCATTTAGGTCTTATTTGGTTGGAGAAAAATTTTAAGTTTGGTTATCACATTGGATATTCGAATACACATTTGAAGTATTAACGTAGTCTAATAACAAAATAAATTACAGATTCCACCAGTAAACTGCGAGACGAATCTATTAAGCTTAATTAATCTATCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCACGGCATAATTAGGCTTAAAAGATCCGTCTCGCAATTTCCTAACGAACTGTGTAATTGTTTTTTTTTCGTATTTAATACTCTATACATATATCCAAACATTCGATGTGATGGGTGAAAAGCTTTTATTTTGAAAACTAAAGCATGTCTTATTTGATATGAAACAAACGGGTGGACTTGAATAATTAGAATCCATCTCCAGCTATCACCATTAATGGTGGAGTGAGCTTTCGATGTGACCATTAATGGAAGGATGCTTCGTTTTTTTTTTCCCTTGGCAGCTAAATCAGTTCTTACTGGAGACGCTGCGGCTGTACAGCCCGGTGCCGGCGATCCGGAGGCGGACGGCGGCGGCGGTGGAGATGGGCGGCGTGACGGTGCCGGGAGGCACGATGCTGACGTTCCCGATCGCGACGATGCACCGCGACGAGGAGGTGTGGGGCGCCGACGCCGGGGTGTTCGACCCGATGAGGTTCGACGGCGGCGGCGGCGCCATGGCCAAGCTGCTGTCCTTCTCCACGGGGCCGAGGGCGTGCGTCGGGCAGAGCTTCGCCATGGTCGAGGCGAAGGCCGTCGTCGCCGCGATACTCAGGCGGTTCAGGCTGGAGCTCTCGCCGGAGTACGTCCACGCGCCCACCGACGTCATCACGCTCCGCCCCAAGCACGGCCTCCCCATGGTCGTCACACGCGTCCACGCGTGACGTGGATACAAGCGATTCGTCACCCCTCGGGAGGACGTTATTTGCATGTCCATGTAAATAGTTATTAAATTTTTTTAAAAAAATAACAATCTCTACTATTATAAAAGTTAAAGATGTTTTTGCCGGT
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| CDS seq | ATGGGTTACGGATGGGCGCTCGCCGCCGTGCTGGCGACGTGGTGCCTGCTCGACGCGCTGTCGCGCCTCGTGTGGCGGCCGCGCGCCGTGGCCGCGGCGCTGCGGCGGCAGGGCGTGCGCGGCCCCGGGTACAGGCTGCTCGTCGGGAGCCTCGGCGACATCAACAAGCTCCGCGCGGACGCCGCCGGCGCCGGCGGCGCCGCGGCGCTCGACGTCGCCTCCCACGACTTCATCCCCTTCGTCCAGCCTCAGTTCCGCCAATGGATCCCTCTCTACGGGCGAGTGTTCTTGTACTGGTTTGGATGGACGCCGGACATGTGCGTGGCCGACGTCGAGGTGGCGAAGCAGGTGCTCTCGGACAGGACAGGGCTGTTCCCCAAGAACGTGACGACACCGATGCTGCTCAAGCTGTTCGGCAGGGGGCTCGTCCTGGCCAACGGCGACGAGTGGCAGCGACACAAGAAGGTCGTCCACCCCGCCTTCAACACGGACAAGCTCAAGATGATGACGGCGACAATGGCCGGCGTCGCACGGTCGATGGTGTCGAGGTGGGAGGAGAAGGTGGCGAGCCATGGCGGGAAGGTGGTGATCGAGCTGAGCAGCCAGTTCGAGGAGCTGACTGCGGACGTGATCTCTCACACGGCGTTCGGGAGCAGCTACGCGGAGGGGAAGCAGGTTTTCATGGCGATCAAGGAGCTCCAGTTCATCGCCTTCTCAAGCCTTCTCAGCGTCCAAATCCCAGGCTCCAGGTATTTTCCAACCAAGAAGAATCTGAAAGTATGGAGGCTGGACAGGAAGGTGAGGAGTACGCTGATGCAGATAATCAGCAACAGACTCGCCGCCGCCGCGAAGGAGAAGGCCGGCGGCGGTGGCGGTGGCTACGGCGAGGACCTGCTCGGGCTGATGCTGGAGGCCAGCGCGCCACCGGAGCTGGGCACGAAGCGTCGTCAGCCGCCGGTGCTGAGCATGGACGAGATCATCGACGAGTGCAAGACCTTCTTCTTTGCCGGGCAGGAGACCACCTCGCACCTCCTCTCCTGGACCATGTTTCTTCTCAGCACGCACCCGGACTGGCAGGACAAGCTCCGGGAAGAAGCCGTGAGAGAGTGCGCCGGCGCCGGCGCCGGGGACGACGACGACCAGCTCCCCACCTACGACATGCTCGGCAAGCTGAAGCTGCTAAATCAGTTCTTACTGGAGACGCTGCGGCTGTACAGCCCGGTGCCGGCGATCCGGAGGCGGACGGCGGCGGCGGTGGAGATGGGCGGCGTGACGGTGCCGGGAGGCACGATGCTGACGTTCCCGATCGCGACGATGCACCGCGACGAGGAGGTGTGGGGCGCCGACGCCGGGGTGTTCGACCCGATGAGGTTCGACGGCGGCGGCGGCGCCATGGCCAAGCTGCTGTCCTTCTCCACGGGGCCGAGGGCGTGCGTCGGGCAGAGCTTCGCCATGGTCGAGGCGAAGGCCGTCGTCGCCGCGATACTCAGGCGGTTCAGGCTGGAGCTCTCGCCGGAGTACGTCCACGCGCCCACCGACGTCATCACGCTCCGCCCCAAGCACGGCCTCCCCATGGTCGTCACACGCGTCCACGCGTGA
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| Protein seq | MGYGWALAAVLATWCLLDALSRLVWRPRAVAAALRRQGVRGPGYRLLVGSLGDINKLRADAAGAGGAAALDVASHDFIPFVQPQFRQWIPLYGRVFLYWFGWTPDMCVADVEVAKQVLSDRTGLFPKNVTTPMLLKLFGRGLVLANGDEWQRHKKVVHPAFNTDKLKMMTATMAGVARSMVSRWEEKVASHGGKVVIELSSQFEELTADVISHTAFGSSYAEGKQVFMAIKELQFIAFSSLLSVQIPGSRYFPTKKNLKVWRLDRKVRSTLMQIISNRLAAAAKEKAGGGGGGYGEDLLGLMLEASAPPELGTKRRQPPVLSMDEIIDECKTFFFAGQETTSHLLSWTMFLLSTHPDWQDKLREEAVRECAGAGAGDDDDQLPTYDMLGKLKLLNQFLLETLRLYSPVPAIRRRTAAAVEMGGVTVPGGTMLTFPIATMHRDEEVWGADAGVFDPMRFDGGGGAMAKLLSFSTGPRACVGQSFAMVEAKAVVAAILRRFRLELSPEYVHAPTDVITLRPKHGLPMVVTRVHA |
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| Function | Cytochrome P450 709B2 [UniProtKB/Swiss-Prot:F4IK45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0635700 | OsNip_07t0635700-00 | Chr07 | 26394225 | 26396629 | + | RAP2018-11-26 | ||
| CDS seq | ATGGGTTACGGATGGGCGCTCGCCGCCGTGCTGGCGACGTGGTGCCTGCTCGACGCGCTGTCGCGCCTCGTGTGGCGGCCGCGCGCCGTGGCCGCGGCGCTGCGGCGGCAGGGCGTGCGCGGCCCCGGGTACAGGCTGCTCGTCGGGAGCCTCGGCGACATCAACAAGCTCCGCGCGGACGCCGCCGGCGCCGGCGGCGCCGCGGCGCTCGACGTCGCCTCCCACGACTTCATCCCCTTCGTCCAGCCTCAGTTCCGCCAATGGATCCCTCTCTACGGGCGAGTGTTCTTGTACTGGTTTGGATGGACGCCGGACATGTGCGTGGCCGACGTCGAGGTGGCGAAGCAGGTGCTCTCGGACAGGACAGGGCTGTTCCCCAAGAACGTGACGACACCGATGCTGCTCAAGCTGTTCGGCAGGGGGCTCGTCCTGGCCAACGGCGACGAGTGGCAGCGACACAAGAAGGTCGTCCACCCCGCCTTCAACACGGACAAGCTCAAGATGATGACGGCGACAATGGCCGGCGTCGCACGGTCGATGGTGTCGAGGTGGGAGGAGAAGGTGGCGAGCCATGGCGGGAAGGTGGTGATCGAGCTGAGCAGCCAGTTCGAGGAGCTGACTGCGGACGTGATCTCTCACACGGCGTTCGGGAGCAGCTACGCGGAGGGGAAGCAGGTTTTCATGGCGATCAAGGAGCTCCAGTTCATCGCCTTCTCAAGCCTTCTCAGCGTCCAAATCCCAGGCTCCAGGTATTTTCCAACCAAGAAGAATCTGAAAGTATGGAGGCTGGACAGGAAGGTGAGGAGTACGCTGATGCAGATAATCAGCAACAGACTCGCCGCCGCCGCGAAGGAGAAGGCCGGCGGCGGTGGCGGTGGCTACGGCGAGGACCTGCTCGGGCTGATGCTGGAGGCCAGCGCGCCACCGGAGCTGGGCACGAAGCGTCGTCAGCCGCCGGTGCTGAGCATGGACGAGATCATCGACGAGTGCAAGACCTTCTTCTTTGCCGGGCAGGAGACCACCTCGCACCTCCTCTCCTGGACCATGTTTCTTCTCAGCACGCACCCGGACTGGCAGGACAAGCTCCGGGAAGAAGCCGTGAGAGAGTGCGCCGGCGCCGGCGCCGGGGACGACGACGACCAGCTCCCCACCTACGACATGCTCGGCAAGCTGAAGCTGCTAAATCAGTTCTTACTGGAGACGCTGCGGCTGTACAGCCCGGTGCCGGCGATCCGGAGGCGGACGGCGGCGGCGGTGGAGATGGGCGGCGTGACGGTGCCGGGAGGCACGATGCTGACGTTCCCGATCGCGACGATGCACCGCGACGAGGAGGTGTGGGGCGCCGACGCCGGGGTGTTCGACCCGATGAGGTTCGACGGCGGCGGCGGCGCCATGGCCAAGCTGCTGTCCTTCTCCACGGGGCCGAGGGCGTGCGTCGGGCAGAGCTTCGCCATGGTCGAGGCGAAGGCCGTCGTCGCCGCGATACTCAGGCGGTTCAGGCTGGAGCTCTCGCCGGAGTACGTCCACGCGCCCACCGACGTCATCACGCTCCGCCCCAAGCACGGCCTCCCCATGGTCGTCACACGCGTCCACGCGTGA
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| Protein seq | MGYGWALAAVLATWCLLDALSRLVWRPRAVAAALRRQGVRGPGYRLLVGSLGDINKLRADAAGAGGAAALDVASHDFIPFVQPQFRQWIPLYGRVFLYWFGWTPDMCVADVEVAKQVLSDRTGLFPKNVTTPMLLKLFGRGLVLANGDEWQRHKKVVHPAFNTDKLKMMTATMAGVARSMVSRWEEKVASHGGKVVIELSSQFEELTADVISHTAFGSSYAEGKQVFMAIKELQFIAFSSLLSVQIPGSRYFPTKKNLKVWRLDRKVRSTLMQIISNRLAAAAKEKAGGGGGGYGEDLLGLMLEASAPPELGTKRRQPPVLSMDEIIDECKTFFFAGQETTSHLLSWTMFLLSTHPDWQDKLREEAVRECAGAGAGDDDDQLPTYDMLGKLKLLNQFLLETLRLYSPVPAIRRRTAAAVEMGGVTVPGGTMLTFPIATMHRDEEVWGADAGVFDPMRFDGGGGAMAKLLSFSTGPRACVGQSFAMVEAKAVVAAILRRFRLELSPEYVHAPTDVITLRPKHGLPMVVTRVHA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_07g0635700 | OsNip_07t0635700-01 | Chr07 | 26394117 | 26396756 | + | IsoSeq | ||
| CDS seq | GCTCGTCGTCGTACGCTTCCTGTACGCATCTTCTTCCTCTCGATTTCCGGCCCTAATCGGGAACAGCAGCATCGATCTATCTCACACTCGCCCCGCGTGCGCGCAAATGGGTTACGGATGGGCGCTCGCCGCCGTGCTGGCGACGTGGTGCCTGCTCGACGCGCTGTCGCGCCTCGTGTGGCGGCCGCGCGCCGTGGCCGCGGCGCTGCGGCGGCAGGGCGTGCGCGGCCCCGGGTACAGGCTGCTCGTCGGGAGCCTCGGCGACATCAACAAGCTCCGCGCGGACGCCGCCGGCGCCGGCGGCGCCGCGGCGCTCGACGTCGCCTCCCACGACTTCATCCCCTTCGTCCAGCCTCAGTTCCGCCAATGGATCCCTCTCTACGGGCGAGTGTTCTTGTACTGGTTTGGATGGACGCCGGACATGTGCGTGGCCGACGTCGAGGTGGCGAAGCAGGTGCTCTCGGACAGGACAGGGCTGTTCCCCAAGAACGTGACGACACCGATGCTGCTCAAGCTGTTCGGCAGGGGGCTCGTCCTGGCCAACGGCGACGAGTGGCAGCGACACAAGAAGGTCGTCCACCCCGCCTTCAACACGGACAAGCTCAAGATGATGACGGCGACAATGGCCGGCGTCGCACGGTCGATGGTGTCGAGGTGGGAGGAGAAGGTGGCGAGCCATGGCGGGAAGGTGGTGATCGAGCTGAGCAGCCAGTTCGAGGAGCTGACTGCGGACGTGATCTCTCACACGGCGTTCGGGAGCAGCTACGCGGAGGGGAAGCAGGTTTTCATGGCGATCAAGGAGCTCCAGTTCATCGCCTTCTCAAGCCTTCTCAGCGTCCAAATCCCAGGCTCCAGGTAGGTACAAACACTTTACCATGTCAAATTTCATCTGAACTG
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| Protein seq | ARRRTLPVRIFFLSISGPNREQQHRSISHSPRVRANGLRMGARRRAGDVVPARRAVAPRVAAARRGRGAAAAGRARPRVQAARREPRRHQQAPRGRRRRRRRRGARRRLPRLHPLRPASVPPMDPSLRASVLVLVWMDAGHVRGRRRGGEAGALGQDRAVPQERDDTDAAQAVRQGARPGQRRRVAATQEGRPPRLQHGQAQDDDGDNGRRRTVDGVEVGGEGGEPWREGGDRAEQPVRGADCGRDLSHGVREQLRGGEAGFHGDQGAPVHRLLKPSQRPNPRLQVGTNTLPCQISSEL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr07 | 26394895 | 26395631 | + | OsNip_07t0635700-01 | OsNip_07t0635700-01,OsNip_07t0635700-00 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.738131 | 0.568381 | 1.597986 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0371350 | SBH | 3.684021 | 2.053170 | 3.377125 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g44140 | SBH | 0.144510 | 0.0 | 0.268450 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0635700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0024630 | SBH | 0.484938 | 0.751467 | 3.284462 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024690 | SBH | 0.434959 | 3.372666 | 0.824791 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0024550 | SBH | 3.452181 | 1.906891 | 1.856833 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0024450 | SBH | 0.584457 | 0.422069 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0024580 | SBH | 3.806940 | 10.738488 | 12.961476 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0433000 | SBH | 63.9028055 | 47.0452215 | 96.268711 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025110 | SBH | 0.156677 | 0.756884 | 1.095535 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0444600 | SBH | 20.8971815 | 9.7736715 | 10.0450955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0024370 | SBH | 0.154278 | 0.034766 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024500 | SBH | 0.210472 | 11.452056 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0024430 | SBH | 6.788849 | 9.310127 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0024630 | SBH | 0.262671 | 0.531327 | 2.773293 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0024340 | SBH | 0.055726 | 1.310296 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024320 | SBH | 0.229475 | 0.549071 | 1.238085 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024350 | SBH | 0.000000 | 4.776464 | 5.837886 |
