Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_04g0434800 OGI:04066380 | 16/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr04:21622953-21627328
Gene Symbol APX7, OsAPx7, OsAPx07, OSAPX7, APx7, sAPX
DNA seq

AAAGCATAATAAGTAAAGAATAGTATTAAAATGTTTTTCTTTTTGGTTTCTCGTCGAATTTGGTCCGCAAGTTCGGCTCAAATTTGCCTCTCTAGCCAGTCTGTTTTTTTATTCGAATACTCAGTTTCCAAATCCAATATGACTCGTGGTCAGGAAAAGCTTCATCTGGAATGATGACACAACGTTGGAGCAGGAAATTGGATTGTGTAGTGTTTCTCTCTTGATCCTACGAGCAAGATAAATAGCAGATTGGAATCATTTTAGCCAAGAACCGAGCGAACCTTCTGTTGAATCACAGTATCGAGTAAGTAGAACAGCTGACATGAACCTACAAATTGGGAGGTGGATGGGGTAGTAGAGTATATAGACCTTTCTGTAAAAGTGGTTGGCCACTTCAGCGATCTGGCTCATGCGCATCGCATTAACCGTCCAACGTGAATCCCTGCAGGACAACCAAACAGTCACATACTCTCAGTTTGCCACAACAGAAGGACCACGGACTAGGATTGGGCGCTAGTCATCGGGGGTAAAAACAACTTGGCAGTGGTTTGTCGGATAAACTATCTCTACTAACTGTGGCCCAGTCGGTCAAGAGTGGCGTGTTGTGGAAAGGAAAACTAAGGACAAGATGTTATCACTCACCTCAGGAGGATTGAATTTTGCACCCAGATTGCTCAGTTTAGCATGAGCTCCGGCATAGTCTTTAAAGAATGCTTCTTGGTCCTCTGCGTATTTTTCTGCATAGACCTGAATGTGCGGTGAATTCTCAGACAGTTAGTTCAATAATTATTTCAATTTTCAAATGATCCTGACATATCCTAGTACGAGATTGGTTTATTTCGGGAAGTGAGAGTACAGTTTAAGCATTATTCACCTTGAATGTTGGGTCCTCAAATAATGCAGCATCTGTAGGCAAGACCAGGAGATCCTGATCTCTTTTCTCTTTTATCTCCTGCAGTATTGCCACCAGGCACCAGCTCACATCATGCAAAATCATATGAATCATCCGACATGAAGAATAAGGGAAAAGTGGCACGTACCTTGAAATAACTGTTATCAAACTTAAGCCATTCAGCTGTCCACGATTGCCCACCAGGTGCACCAGGGCCATTCTTCTGAAAAAGTAAGAAAAAAAAGGTGAAAAAGCTCAAGATTTGTCCAATCCAGTCTAACCATAAAGACAAATGCACTTGGAGTTGATGTTGCTTCATGGAGTTGCAGAGGCGGCACGATATTTTGCAGAGAATATATAGAGATTATGTGAGCAAAAAGTACATCCTTCAGCCAAAACCATCGGAGCAGAGGCCAAGGAAAAATATCTAAAACGTATGGAGTTCTGATTTACTCTAGTCTGTAGCTATGTACACATCTTGAAATTAATACACGTAGTTTCTTTCCTGAGGAATAAGGGTAATTTAAGCAGAGACATTAAGTACTGAAAGCATAAAACATCATGAAGTACTAAGTGGTCCTTGACTCCTTGTTGCAAAAATGATGACATGATATGCAATGATAGACTTAACATGGGAATACATTGAAACAGTGGATAGAACTGAGATCATGCTCAAAACTCGGTTCTCACATAAGAAAATAAAGATAAGAAGAACATACAGTATATTTCGTTTCTGGTTTCCCCCAGCCACTCCGTTCAGGTCTGGACCTTCCAAGTGTATGTGCTCCAGACAGCACAACAATCTCCTGTAGGCACAGCATCGCGGGGCACATGCAACTCAACATCACATAAAACAAAGCAAATGGGAAAACATCTGGTTAACTAGAATCTCATTTGCACACCTTGTCATCAAGACCCATCCTGTAAAATACCTTCCTCAAGTGATCCGCAGGTGCACTTGGGCCAGCATCTGAGCAACCAAAAGGGAAGGATAACTGAAAGTTAGCAAGCATCAGTTTTAAGGGATTGAGTATGATGCTGGTGCAATATTTCCTAAATACCCCTATATGTAAGAACAGTTTTATGCCTGTTAGCGTGGCAATAAAAACTATCCCATAATTTTCCAAGGGAAAAAATAAGGTCGGTTGATATATTAAGCTGATGAGAGACAATGTACATAGGAACCTTTACATTTAAAAATTAAAAAGAACAATTATGAAGTAAGCAAGACAGGATATCAGTACAGATGTTAGTGTTTTGGAAAATCCAGTGAAACATAAGTTGCTAACCGGGAAGCTTCCCCTCAGGTGGACACTGCTCAGGACCTGTGACATCAATCCGTCCATATGTCATTGGAATCTTTGGACCACCAGCTTCCTAGTACAAGTTTGACAAAAATGGATCATTAAGGTAGAATATAGTGTTCGTACATTAAAACCAGACTAGTTAGGTACTTCATTTTTCATTATTTTTTGGGGGCGTGAGGGGATCAGACCTCAATTGCTGTAGCACTTGCCAGCTGGAATAAATCCGCATATGAGATATTTGGGTATTTGTCCTTGATAGGTTGGACAAGCTTTAGAGCATTTACCAGCCCTTCAATAATTCAATCAGGATTTTTAGTTGCTGAAAGTACACTTACAAGCAACAAGGAAACGAAATCGTGAAAAGGTAATGTTACCAGCATTGGCTCCATGTTTTAACTCAACATCAAATCTCAAGCTTCCATTAGCTCCACCTCGTTGTGGCCACTCTTTAATATTCTTGTCATACGTACCGGAATCATGCCATCCAAGACGAACCTTCATGCAGGCAAAGGAATAACATTTTAACCACCGTGGATATAGAGAAACTGGAGTAGAAAGCCAATTGATTGTGCACATGCAAGGGTTTGAATGGAACTAAACAATAGGAAATGGTGCCGTGGTCTACCCCCGTTGCATTGCATTCAGTATTTGCAAATTCAAAATGTACGACAGTACAAGTTCAGTCAATGGTGATTATTTGGATAAATGGCAGCCCTATTAACACCTTTAACTTCAGCAAGCTGGCATATCATAGCCATGACCATATGAAGGTAAAATAGCATGGAAATAACCAATGAACTGGACTTATGTCCTAGTGCTATGATAATGTTGTTCTGCTGTCATTAATTATTCAACGCCGCATTCATATTGCCTAATTCCTTAGAATTTACTTGTACCATCTGATAACTAATTGAACACAGCCTAACAATTTACACAAGCACGACCTACGTTCCTAAATGTAAGCATTTCTGGCTAGAAATACTTATATTTGAGAACGGACAGAGTAACTCACATGATACTTGATAGTCTCACTGGGAAAAGCTGCTGCAAGTGTTAGTATCAGTTATCACCACAAACAATAAATGATGATAGGATACGTGATGAATGAATTTATAGTTTCAAACTTTCAATACAACTCTTAACTCTCACAAGCCATTTGTGACATGTGCAACCTACTCGTCAGTACAGATGAGATCAGACTTAACAATTGAACTGTCGTTACACATTGGTGATTTACGACAATACGCTATTTCTAGAGGTCAAAATCCTATTTGAGAGGCAAGCTGGTCATGAAATTACTTCCTCGTGATGTTAAATTCCAGCATTGCTCCAGAGAGCATATTCAGTGTGTTCACAGATTCATGACATCACTGTCTCCAGAGAGAAAATTCAGTGTGTTCACAAACTCATAACATCGCTGTCTCCGAGCTGAGTTTGTTCTCATGTGCAATCCTTGGTTGCAAAGGCGATCGGCCAGATGGCTCCTCTGCTACCGAATCAAATCTCCCACATGGTGATGCTGATATGAAGGAGAAGTTTCGGAGCAACCAAAGCCGCATCGCGTGGTGCGTGTACACGAGACGAGATCATACCAGGATGGGGTGGCAGTGCGTCGTCTTGAGGAGCTCCCTGATGTCCTCGCGAGCGGCCTTCAGCTCCGCCGCGCCCGACGCCACCGCCGCCGACGCCGCCGACGCCGACGCCGACGCCATGCACATCACCGACCTGCCGCTCCCCGCCGCCTTCGCCTCCTGCGATCACACACACACAGCCAGAGCACGAGTCAACAACAACAAACAACCAGGGCGTCCCAAACCCCAACCCAACCACCACCCAAGACCGAGCCGACACGGACCTGGGGGAGGAGCCGAGAAGGTGCGGCGCGGAGGGTGGCGGAGGCGCGCGGGAGGGCCACCGGGAGGAGAGCGGTGGTGCTGGATCGCGCCGCGGGGCGGCCATGCGAGGCGGAGGAGGTGGAGGAGAAGGCCGACGGCGCGGCGGCGTGGAGGGCGGCGAGTCGCTGGGCCGCCATGGGTGACGCTGGTGGTGGGTTGGTGGGAGGGAGGGGAGCGTGGCCTTTGGGGCGGGGACGAGGCGGAGTGAGGTGAAAAAAGTCCAGTCCACCACCACGCCCGCCGCCTTGGGTTTCGAGGGGGTTTTTCGCGGTTCGTTGGTGC

More
CDS seq

ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCATGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCTCCGCCACCCTCCGCGCCGCACCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATGGCATGATTCCGGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGGCTGGTAAATGCTCTAAAGCTTGTCCAACCTATCAAGGACAAATACCCAAATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATTGATGTCACAGGTCCTGAGCAGTGTCCACCTGAGGGGAAGCTTCCCGATGCTGGCCCAAGTGCACCTGCGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTTGATGACAAGGAGATTGTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACAGCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGAGATAAAAGAGAAAAGAGATCAGGATCTCCTGGTCTTGCCTACAGATGCTGCATTATTTGAGGACCCAACATTCAAGGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCCTCCTGAGGGATTCACGTTGGACGGTTAA

More
Protein seq

MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRASATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG

Function Probable L-ascorbate peroxidase 7, chloroplastic [UniProtKB/Swiss-Prot:Q7XJ02]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_04g0434800 OsNip_04t0434800-02 Chr04 21622953 21627230 - RAP2018-11-26
CDS seq

ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCATGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCTCCGCCACCCTCCGCGCCGCACCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATGGCATGATTCCGGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGGCTGGTAAATGCTCTAAAGCTTGTCCAACCTATCAAGGACAAATACCCAAATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATTGATGTCACAGGTCCTGAGCAGTGTCCACCTGAGGGGAAGCTTCCCGATGCTGGCCCAAGTGCACCTGCGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTTGATGACAAGGAGATTGTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACAGCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGAGATAAAAGAGAAAAGAGATCAGGATCTCCTGGTCTTGCCTACAGATGCTGCATTATTTGAGGACCCAACATTCAAGGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCCTCCTGAGGGATTCACGTTGGACGGTTAA

More
Protein seq

MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRASATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG

More
Gene Transcript Chromosome Start End Strand Source
OsNip_04g0434800 OsNip_04t0434800-01 Chr04 21622953 21627231 - RAP2018-11-26
CDS seq

ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCATGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCTCCGCCACCCTCCGCGCCGCACCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATGGCATGATTCCGGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGGCTGGTAAATGCTCTAAAGCTTGTCCAACCTATCAAGGACAAATACCCAAATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATTGATGTCACAGGTCCTGAGCAGTGTCCACCTGAGGGGAAGCTTCCCGATGCTGGCCCAAGTGCACCTGCGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTTGATGACAAGGAGATTGTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACAGCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGAGATAAAAGAGAAAAGAGATCAGGATCTCCTGGTCTTGCCTACAGATGCTGCATTATTTGAGGACCCAACATTCAAGGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCCTCCTGAGGGATTCACGTTGGACGGTTAA

More
Protein seq

MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRASATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG

More
Gene Transcript Chromosome Start End Strand Source
OsNip_04g0434800 OsNip_04t0434800-03 Chr04 21622953 21627328 - IsoSeq
CDS seq

GCACCAACGAACCGCGAAAAACCCCCTCGAAACCCAAGGCGGCGGGCGTGGTGGTGGACTGGACTTTTTTCACCTCACTCCGCCTCGTCCCCGCCCCAAAGGCCACGCTCCCCTCCCTCCCACCAACCCACCACCAGCGTCACCCATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCATGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCTCCGCCACCCTCCGCGCCGCACCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATG

More
Protein seq

APTNREKPPRNPRRRAWWWTGLFSPHSASSPPQRPRSPPSHQPTTSVTHGGPATRRPPRRRAVGLLLHLLRLAWPPRGAIQHHRSPPGGPPARLRHPPRRTFSAPPPGGEGGGERQVGDVHGVGVGVGGVGGGGVGRGGAEGRSRGHQGAPQDDALPPHPGSSWM

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
RI Chr04 21622953 21623394 - OsNip_04t0434800-01 OsNip_04t0434800-01,OsNip_04t0434800-02 All
RI Chr04 21622953 21623394 - OsNip_04t0434800-01 OsNip_04t0434800-03,OsNip_04t0434800-01 All
A5 Chr04 21623178 21623322 - OsNip_04t0434800-03 OsNip_04t0434800-03,OsNip_04t0434800-02 All

Expression

Leaf Root Panicle
FPKM 12.365689 12.525783 9.373164

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0553200 RBH 43.168739 42.926872 15.479762
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g35520 RBH 7.982266 8.062280 2.289393
Nipponbare | IRGSP 1.0 | RAP-db Os04g0434800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0013900 RBH 0.606701 65.698204 7.456493
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0014750 RBH 0.0 16.258204 5.018095
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0014500 RBH 1.283328 70.787415 15.790768
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0014080 RBH 0.642818 2.122177 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0014400 RBH 5.420769 46.857716 31.695826
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0338400 RBH 6.6158295 43.879654 4.1261115
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0013320 RBH 0.391433 5.546934 1.843387
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0335300 RBH 6.7937095 20.554908 10.2461585
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0013860 RBH 1.563615 1.140854 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0013640 RBH 0.641183 41.570103 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0013610 RBH 6.223186 50.194233 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0014210 RBH 1.299097 5.981054 2.775356
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0014430 RBH 0.723306 35.124077 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G013500 RBH 0.833229 19.986788 4.748816
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0013510 RBH 1.949210 74.559555 16.583002
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.