Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsIR64_04g0013320 | OGI:04066380 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr04:21155826-21160164 | ||||||||
Gene Symbol | APX7, OsAPx7, OsAPx07, OSAPX7, APx7, sAPX | ||||||||||
DNA seq | AAAGCATAATAAGTAAAGAATAGTATTAAAATGTTTTTCTTTTTGGTTTCTCATCGAATTTGGTCCGCAAGTTCGGCTCAAATTTGCCTCTCTAGCCAGTCTGTTTTTTTATTCGAATACTCAGTTTCCAAATCCAATATGACTCGTGGTCAGGAAAAGCTTCATCTGGAATGATGACACAACGTTGGAGCAGGAAATTGGATTGTGTAGTGTTTCTCTCTTGATCCTACGAGCAAGATAAATAGCAGATTGGAATCATTTTAGCCAAGAACCGAGCGAACCTTCTGTTGAATCACAGTATCGAGTAAGTAGAACAGCTGACATGAACCTACAAATTGGGAGGTGGATGGGGGTAGAGTATATAGACCTTTCTGTAAAAGTGGTTGGCCACTTCAGCGATCTGGCTCATGCGCATCGCATTAACCGTCCAACGTGAATCCCTGCAGGACAACCAAACAGTCACATACTCTCAGTTTGCCACAACAGAAGGACCACGGACTAGGATTGGGCGCTAGTCATCGGGGGTAAAAACAACTTGGCAGTGGTTTGTCGGATAAACTATCTCTACTAACTGTGGCCCAGTCGGTCAAGAGTGGCGTGTTGTGGAAAGGAAAACTAAGGACAAGATGTTATCACTCACCTCAGGAGGATTGAATTTTGCACCCAGATTGCTCAGTTTAGCATGAGCTCCGGCATAGTCTTTAAAGAATGCTTCTTGGTCCTCTGCGTATTTTTCTGCATAGACCTGAATGTGCGGTGAATTCTCAGACAGTTAGTTCAATAATTATTTCAATTTTCAAATGATCCTAACATATCCTATTACGAGGTTGGTTTATTTCGGGAAGTGAGAGTACAGTTTAAGCATTATTCACCTTGAATGTTGGGTCCTCAAATAATGCAGCATCCGTAGGCAAGACCAGGAGATCCTGATCTCTTTTCTCTTTTATCTCCTGCAGTATTGCCACCAGGCACCAGCTCACATCATGCAAAATCATATGAATCATCCGACATGAAGAATAAGGGAAAAGTGGCACGTACCTTGAAATAACTGTTATCAAACTTAAGCCATTCAGCTGTCCACGATTGCCCACCAGGTGCACCAGGGCCATTCTTCTGAAAAAGTAAGAAAAAAAAGGTGAAAAAGCTCAAGATTTGTCCAATCCAGTCTAACCATAAAGACAAATGCACTTGGAGTTGATGTTGCTTCATGGAGTTGCAGAGGCGGCACGATATTTTGCAGAGAATATATAGAGATTATGTGAGCAAAAAGTACATCCTTCAGCCAAAACCATCGGAGCAGAGGCCAAGGAAAAATATCTAAAACGTATGGAGTTCTGATTTACTCTAGTCTGTAGCTATGTACACATCTTGAAATTAATACACGTAGTTTCTTTCCTGAGGAATAAGGGTAATTTAAGCAGAGACATTAAGTACTGAAAGCATAAAACATCATGAAGTACTAAGTGGTCCTTGACTCCTTGTTGCAAAAATGATGACATGATATGCAATGATAGACTTAACATGGGAATACATTGAAACAGTGGATAGAACTGAGATCATGCTCAAAACTCGGTTCTCACATAAGAAAATAAAGATAAGAAGAACATACAGTATATTTCGTTTCTGGTTTCCCCCAGCCACTCCGTTCAGGTCTGGACCTTCCAAGTGTATGTGCTCCAGACAGCACAACAATCTCCTGTAGGCACAGCATCGCGGGGCACATGCAACTCAACATCACATAAAACAAAGCAAATGGGAAAACATCTGGTTAACTAGAATCTCATTTGCACACCTTGTCATCGAGACCCATCCTGTAAAATACCTTCCTCAAGTGATCCGCAGGTGCACTTGGGCCAGCATCTGAGCAACCAAAAGGGAAGGATAACTGAAAGTTAGCAAGCATCAGTTTTAAGGGATTGAGTATGATGCTGGTGCAATATTTCCTAAATACCCCTATATGTAAGAACAGTTTTATCCCATAATTTTCCAAGGGAAAAAATAAGGTCGGTTGATATATTAAGCTGATGAGAGACAATGTACATAGGAACCTTTACATTTAAAAATTAAAAAGAACAATTATGAAGTAAGCAAGACAGGATATCAGTACAGATGTTAGTGTTTTGGAAAATCCAGTGAAACATAAGTTGCTAACCAGGAAGCTTCCCCTCAGGTGGACACTGCTCAGGACCTGTGACATCAATCCGTCCATATGTCATTGGAATCTTTGGACCACCAGCTTCCTAGTACAAGTTTGACAAAAATGGATCATTAAGGTAGAATATAGTGTTCGTACATTAAAACCAGACTAGTTAGGTACTTCATTTTTCATTATTTTTTGGGGGCGTGAGGGGATCAGACCTCAATTGCTGTAGCACTTGCCAGCTGGAATAAATCCGCATATGAGATATTTGGGTATTTGTCCTTGATAGGTTGGACAAGCTTTAGAGCATTTACCAGCCCTTCAATAATTCAATCAGGATTTTTAGTTGCTGAAAGTACACTTACAAGCAACAAGGAAACGAAATCGTGAAAAGGTAATGTTACCAGCATTGGCTCCATGTTTTAACTCAACATCAAATCTCAAGCTTCCATTAGCTCCACCTCGTTGTGGCCACTCTTTAATATTCTTGTCATACGTACCAGAATCATGCCATCCAAGACGAACCTTCATGCAGGCAAAGGAATAACATTTTAACCACCGTGGATATAGAGAAACTGGAGTAGAAAGCCAATTGATTGTGCACATGCAAGGGTTTGAATGGAACTAAACAATAGGAAATGGTGCCGTGGTCTACCCCCGTTGCATTGCATTCAGTATTTGCAAATTCAAAATGTACGACAGTACAAGTTCAGTCAATGGTGATTATTTGGATAAATGGCAGCCCTATTAACACCTTTAACTTCAGCAAGCTGGCATATCATAGCCATGACCATATGAAGGTAAAATAGCATGGAAATAACCAATGAACTGGACTTATGTCCTAGTGCTATGATAATGTTGTTCTGCTGTCATTAATTATTCAACGCCGCATTCATATTGCCTAATTCCTTAGAATTTACTTGTACCATCTGATAACTAATTGAACACAGCCTAACAATTTACACAAGCACGACCTACGTTCCTAAATGTAAGCATTTCTGGCTAGAAATACTTATATTTGAGAACGGACAGAATAACTCACATGATACTTGATAGTCTCACTGGGAAAAGCTGCTGCAAGTGTTAGTATCAGTTATCACCACAAACAATAAATGATGATAGGATACGTGATGAATGAATTTATAGTTTCAAACTTTCAATACAACTCTTAACTCTCACAAGCCATTTGTGACATGTGCAACCTACTCGTCAGTACAGATGAGATCAGACTTAACAATTGAACTGTCGTTACACATTGGTGATTTACGACAATACGCTATTTCTAGAGGTCAAAATCCTATTTGAGAGGCAAGCTGGTCATGAAATTACTTCCTCGTGATGTTAAATTCCAGCATTGCTCCAGAGAGCATATTCAGTGTGTTCACAGATTCATGACATCACTGTCTCCAGAGAGAAAATTCAGTGTGTTCACAAACTCATAACATCGCTGTCTCCGAGCTGAGTTTGTTCTCATGTGCAATCCTTGGTTGCAAAGGCGATCGGCCAGATGGCTCCTCTGCTACCGAATCAAATCTCCCACATGGTGATGCTGATATGAAGGAGAAGTTTCGGAGCAACCAAAGCCGCATCGCGTGGTGCGTGTACACGAGACGAGATCATACCAGGATGGGGTGGCAGTGCGTCGTCTTGAGGAGCTCCCTGATGTCCTCGCGAGCGGCCTTCAGCTCCGCCGCGCCCGACGCCACCGCCGCCGACGCCGACGCCGACGCCATGCACATCACCGACCTGCCGCTCCCCGCCGCCTTCGCCTCCTGCGATCACACACACACAGCCAGAGCACGAGTCAACAACAACAAACAACCAGGGCGTCCCAAACCCCAACCCAACCACCACCCAAGACCGAGCCGACACGGACCTGGGGGAGGAGCCGAGAAGGCGCGGCGCGGAGGGTGGCGGCGGCGCGCGGGAGGGCCACCGGGAGGAGAGCGGTGGTGCTGGATCGCGCCGCGGGGCGGCCGTGCGAGGCGGAGGAGGTGGAGGAGAAGGCCGACGGCGCGGCGGCGTGGAGGGCGGCGAGTCGCTGGGCCGCCATGGGTGACGGTGGTGGTGGGTTGGTGGGAGGGAGGGGAGCGTGGCCTTTGGGGCGGGGACGAGGCGGAGTGAGGTGAAAAAAGTCCAGTCCACCACCACGCCCGCCGCCTTGGGTTTCGAGGGGGTTTTTCGCGGTTCGTTGGTGCT
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CDS seq | ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCACGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCGCCGCCACCCTCCGCGCCGCGCCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATGGCATGATTCTGGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGTAACATTACCTTTTCACGATTTCGTTTCCTTGTTGCTTGGCTGGTAAATGCTCTAAAGCTTGTCCAACCTATCAAGGACAAATACCCAAATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATTGATGTCACAGGTCCTGAGCAGTGTCCACCTGAGGGGAAGCTTCCTGATGCTGGCCCAAGTGCACCTGCGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTCGATGACAAGGAGATTGTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACAGCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCCTCCTGAGGGATTCACGTTGGACGGTTAA
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Protein seq | MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRAAATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRFLVAWLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG |
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Function | Probable L-ascorbate peroxidase 7, chloroplastic [UniProtKB/Swiss-Prot:Q7XJ02] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsIR64_04g0013320 | OsIR64_04g0013320.02 | Chr04 | 21155848 | 21160151 | - | NAM | ||
CDS seq | ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCACGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCGCCGCCACCCTCCGCGCCGCGCCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATGGCATGATTCTGGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGTAACATTACCTTTTCACGATTTCGTTTCCTTGTTGCTTGGCTGGTAAATGCTCTAAAGCTTGTCCAACCTATCAAGGACAAATACCCAAATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATTGATGTCACAGGTCCTGAGCAGTGTCCACCTGAGGGGAAGCTTCCTGATGCTGGCCCAAGTGCACCTGCGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTCGATGACAAGGAGATTGTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACAGCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCCTCCTGAGGGATTCACGTTGGACGGTTAA
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Protein seq | MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRAAATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRFLVAWLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsIR64_04g0013320 | OsIR64_04g0013320.01 | Chr04 | 21155826 | 21160151 | - | NAM | ||
CDS seq | ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCACGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCGCCGCCACCCTCCGCGCCGCGCCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATGGCATGATTCTGGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGTAACATTACCTTTTCACGATTTCGTTTCCTTGTTGCTTGGCTGGTAAATGCTCTAAAGCTTGTCCAACCTATCAAGGACAAATACCCAAATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATTGATGTCACAGGTCCTGAGCAGTGTCCACCTGAGGGGAAGCTTCCTGATGCTGGCCCAAGTGCACCTGCGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTCGATGACAAGGAGATTGTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACAGCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCCTCCTGAGGGATTCACGTTGGACGGTTAA
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Protein seq | MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRAAATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRFLVAWLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsIR64_04g0013320 | OsIR64_04g0013320.03 | Chr04 | 21155860 | 21160164 | - | IsoSeq | ||
CDS seq | GCACCAACGAACCGCGAAAAACCCCCTCGAAACCCAAGGCGGCGGGCGTGGTGGTGGACTGGACTTTTTTCACCTCACTCCGCCTCGTCCCCGCCCCAAAGGCCACGCTCCCCTCCCTCCCACCAACCCACCACCACCGTCACCCATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCACGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTGGCCCTCCCGCGCGCCGCCGCCACCCTCCGCGCCGCGCCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATG
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Protein seq | APTNREKPPRNPRRRAWWWTGLFSPHSASSPPQRPRSPPSHQPTTTVTHGGPATRRPPRRRAVGLLLHLLRLARPPRGAIQHHRSPPGGPPARRRHPPRRAFSAPPPGGEGGGERQVGDVHGVGVGVGGGGVGRGGAEGRSRGHQGAPQDDALPPHPGSSWM |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
SE | Chr04 | 21156570 | 21156864 | - | OsIR64_04g0013320.03 | OsIR64_04g0013320.01,OsIR64_04g0013320.03,OsIR64_04g0013320.02 | All |
A5 | Chr04 | 21158284 | 21158370 | - | OsIR64_04g0013320.01,OsIR64_04g0013320.02 | OsIR64_04g0013320.01,OsIR64_04g0013320.03,OsIR64_04g0013320.02 | All |
A5 | Chr04 | 21156051 | 21156193 | - | OsIR64_04g0013320.02 | OsIR64_04g0013320.03,OsIR64_04g0013320.02 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 0.391433 | 5.546934 | 1.843387 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0434800 | RBH | 12.365689 | 12.525783 | 9.373164 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g35520 | RBH | 7.982266 | 8.062280 | 2.289393 |
Nipponbare | IRGSP 1.0 | RAP-db | Os04g0434800 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0013900 | RBH | 0.606701 | 65.698204 | 7.456493 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0014750 | RBH | 0.0 | 16.258204 | 5.018095 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0014500 | RBH | 1.283328 | 70.787415 | 15.790768 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0014080 | RBH | 0.642818 | 2.122177 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0014400 | RBH | 5.420769 | 46.857716 | 31.695826 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0338400 | RBH | 6.6158295 | 43.879654 | 4.1261115 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0020390 | RBH | 8.798441 | 0.0 | 6.162929 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0335300 | RBH | 6.7937095 | 20.554908 | 10.2461585 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0013860 | RBH | 1.563615 | 1.140854 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0013640 | RBH | 0.641183 | 41.570103 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0013610 | RBH | 6.223186 | 50.194233 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0014210 | RBH | 1.299097 | 5.981054 | 2.775356 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014430 | RBH | 0.723306 | 35.124077 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G013500 | RBH | 0.833229 | 19.986788 | 4.748816 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0013510 | RBH | 1.949210 | 74.559555 | 16.583002 |