Basic Info
Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNip_03g0333500 OGI:03032760 | 16/16 Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) Chr03:12324376-12324492
Gene Symbol -
DNA seq

TCTTCAGCCTAGAGGACTCGGCCTCTGAAGGAAGGGCGCTGGCCTCACATAGCTGAATCCCACGAAGTTGCTATCTGCAGCGACAGGGCTGGCCACTGGAGAGTCGAGCACGGGCAT
CDS seq

ATGCCCGTGCTCGACTCTCCAGTGGCCAGCCCTGTCGCTGCAGATAGCAACTTCGTGGGATTCAGCTATGTGAGGCCAGCGCCCTTCCTTCAGAGGCCGAGTCCTCTAGGCTGA
Protein seq

MPVLDSPVASPVAADSNFVGFSYVRPAPFLQRPSPLG
Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNip_03g0333500 OsNip_03t0333500-00 Chr03 12324376 12324492 - RAP2018-11-26
CDS seq

ATGCCCGTGCTCGACTCTCCAGTGGCCAGCCCTGTCGCTGCAGATAGCAACTTCGTGGGATTCAGCTATGTGAGGCCAGCGCCCTTCCTTCAGAGGCCGAGTCCTCTAGGCTGA
Protein seq

MPVLDSPVASPVAADSNFVGFSYVRPAPFLQRPSPLG
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 1.291924

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0680900 SBH 1.965120 0.858653 4.611570
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g21580 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os03g0333500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0016730 RBH 0.327544 22.028206 7.219740
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0016570 RBH 0.108865 3.887019 2.926001
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0016590 SBH 0.000000 14.344646 13.322151
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0016590 RBH 0.0 0.455002 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0016360 SBH 0.000000 10.187994 17.107105
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0203500 SBH 6.282016 11.014469 28.5141325
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0016240 RBH 0.000000 1.505291 2.629375
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0207900 RBH 10.8437855 16.8915355 44.5555765
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0016470 SBH 0.124873 0.119535 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0016500 RBH 0.209771 21.547564 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0016540 SBH 2.029057 13.569568 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0016420 RBH 0.238147 1.992219 2.734656
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0016330 SBH 0.481024 13.707436 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G016290 SBH 0.100698 5.875459 4.764606
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0016240 SBH 0.688492 16.936178 10.787181
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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