Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_12g0006260 OGI:12013290 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr12:4956989-4960359
Gene Symbol CYP76M13, CYP76M13
DNA seq

aaattacacactacacaatattctttgctatagcatgtaggggggtcgccatagacagtgttagtccaaacttttctgccatgtctacgccaccgttcttcttcactacttcaggcagtgtccactgaaactgatgaactagcgagccaagcataagatgcagcattctatttgctaccggatatccgaggcagaaacgtcgtccggcactgaatggaacaagctccatgttggtactacctgatgacaaactgatctccttttgtaggaatctctctggtatgaacttgtctggttcaatccaaacctctgaattctgatgaattgcccatgtatttactaccacagtggtttctttGgggattttatacccttgtatttcaactgggacggctgctttgtacattagcagtggtatggctggatgtagcctatgtgtttccttgatgactgcttgaagatagggaagttggtcgatgtcttcttcatctatataagtttttgagcctatgacctttttgagctcttcttgcaaTtttctcatagtttgaggattctgcagtagctcggccattgcccactctattacagctgagcttgtttcactgcccgccgttagtaaatcctgaaattggttaagcaatgtaagtaattttgatcataaaccgaatatcttaacatattgtgcacaattacttcgagatagatggcacccatggcgttctcacTttttttccattacaactgaagaaaaactagtattgttacatatatacttctatcataagaattaatatatcatcgtgtgcctactaacaaatatctaaagagattagcagatattataaataatgcaaattttgctaaaaggcatcatgatttcatagttttagctcctgaacacaacaaaagtcaatctttagagcatatactttcaaagtatggttatttgctactgaacaccacattgatcaaaatattcaTtttcgattgaatagaagagaaaaacggtgcaaaaggcaaatatgccactggccttggtcatttagctagtatatttgtcctttcacactatttatctcttttttattaaataaaaataaatattttaatcaacatgatgtccagtagtaaataaccatgtatactttaaaagtacgttcccaaagatgagctcttaccgtatgtagaagctaaaactgcttagcagccgtgatgccctcccataaaatttgcctttaaataaatatgtaaatatatatccccaacaaacttgtaggagtattgaaaacacatccacgcgcaatagaccaacccagagaaaatatttaaggcttgacaaaaacctaggcagacgattatagaaatcaccttgcgcatgaaatatagtttgttttaaagtgttttcgctcttccaatcttttttttcatgaccaaaatagttataaaaaaattagaaaatagctttgttagagataatgtactctagtgagccggggtcacagggcttccgtccacacattatgttttagtgactacgaagcgacaaactgtcatgtagaagagccatgattaattaatattgatgtcttctaacatcacgttgtttatagctcagtagcaaTttttgcctctttctagaacatatgtgcagtgagaaaagttacttttgtgcgtggtttttctgttctgatcaaagggtgatgaattatccaaccttttataatatgttaagaaaggattaactattataaaggtgtaaaatcattggaaaaacatcactaaaaacatgtactcccaTtttaaaatcgatgacgccgttacccttttatacgacgattaaccattcgttttattaaaagctaaataaatattatttattttattctaacttgcatgTtttgttatatattaaaagaaatttatatatgatttatactttggcatatttgtactaaaattttaaaatatgacatacagtcaaaagataattacaagtaaactgtataatctaataaaaatgtgtgtgtgtgtatatatatatatatatatatatatagagagagagagagaggatataggccccatttagttccttaaatttttttcccaaaaaacatcacatcaaatctttagacacatacatgaagcattaaatatagataaatgaaaaaactaattgcatagttaggagggaaatcgcgagataaatcttttgagcctaattagtccatgattagccataaatgctacagtagtaaccCAcatatgctaatgacggattaattaggctcaaaagattcgtctcacggtttccaggcgagttatgaaattaTtttttttattcgtatccgaaaagcccttccgacatccgattaaacatctgatgtgacaaataaaaattttcttttcgtgaactaaataggcccatactccatatatatacttacggccaaaaatgctcttatcacaccccggttgatggtgaggctgtcgtcattctgctcctgtttctccgatacgtccagcatcacatcaagcaggtccttctccttctccccgtgcgcaccggctgtttcccggccacgcatccgccgttcgacatggccgtcgatcagctggtacatccacgtgatgtgcctcgccgtccttcgccgaaggccctgcagatcggccatggccaccaccgggaagaactccgacacgttgggcgtcagcgtcagcagcgcgaactcccgcgccgcgtcgcggaaccggcacgacgtcgcggcgtcgatgcccaccgagaacagcgaccggaacagcaggctcgccatggccgcgaacgccgccctcccgacgtcgaccaccgccgtgcctgtgcctccgccggacgccgcagccagctccgacacgtggcggaggaggccgcgcacggcgtcccggcgcagcgggcgctgcttctcgacccgccgcggcgagaacagctgctcggcgccgagccggcgcagcgcgcgccaccggtggtggcgcgtcggtaacgcgaagatggagttggtctcgtgcccgtcggtgcgccacgcgtccggcgtgccgcggtcggtgatgctggcgccgtgcctgtgcaggacctcgcgcgccatggccggcgaggaggccacgacggcgagcgtggtgcccaggcggagcgtcaccagcgggccgtaccgctgtgcgacgcgcgacaacgagcggtgcgggagctcaccggcgacgtcgaggaggttgccgatgaccggaagcggcctcgggcccggtgggagagggcggcgagcgtctgagagaagccggaagacatgggagcagagcagcaagagtgcaagtgaacagatgcatccgatgaagatggccat

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CDS seq

atggccatcttcatcggatgcatctgttcacttgcactcttgctgctctgctcccatgtcttccggcttctctcagacgctcgccgccctctcccaccgggcccgaggccgcttccggtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgctcgttgtcgcgcgtcgcacagcggtacggcccgctggtgacgctccgcctgggcaccacgctcgccgtcgtggcctcctcgccggccatggcgcgcgaggtcctgcacaggcacggcgccagcatcaccgaccgcggcacgccggacgcgtggcgcaccgacgggcacgagaccaactccatcttcgcgttaccgacgcgccaccaccggtggcgcgcgctgcgccggctcggcgccgagcagctgttctcgccgcggcgggtcgagaagcagcgcccgctgcgccgggacgccgtgcgcggcctcctccgccacgtgtcggagctggctgcggcgtccggcggaggcacaggcacggcggtggtcgacgtcgggagggcggcgttcgcggccatggcgagcctgctgttccggtcgctgttctcggtgggcatcgacgccgcgacgtcgtgccggttccgcgacgcggcgcgggagttcgcgctgctgacgctgacgcccaacgtgtcggagttcttcccggtggtggccatggccgatctgcagggccttcggcgaaggacggcgaggcacatcacgtggatgtaccagctgatcgacggccatgtcgaacggcggatgcgtggccgggaaacagccggtgcgcacggggagaaggagaaggacctgcttgatgtgatgctggacgatttactaacggcgggcagtgaaacaagctcagctgtaatagagtgggcaatggccgagctactgcagaatcctcaaactatgagaaaAttgcaagaagagctcaaaaaggtcataggctcaaaaacttatatagatgaagaagacatcgaccaacttccctatcttcaagcagtcatcaaggaaacacataggctacatccagccataccactgctaatgtacaaagcagccgtcccagttgaaatacaagggtataaaatcccCaaagaaaccactgtggtagtaaatacatgggcaattcatcagaattcagaggtttggattgaaccagacaagttcataccagagagattcctacaaaaggagatcagtttgtcatcaggtagtaccaacatggagcttgttccattcagtgccggacgacgtttctgcctcggatatccggtagcaaatagaatgctgcatcttatgcttggctcgctagttcatcagtttcagtggacactgcctgaagtagtgaagaagaacggtggcgtagacatggcagaaaagtttggactaacactgtctatggcgacccccctacatgctatagcaaagaatattgtgtag

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Protein seq

MAIFIGCICSLALLLLCSHVFRLLSDARRPLPPGPRPLPVIGNLLDVAGELPHRSLSRVAQRYGPLVTLRLGTTLAVVASSPAMAREVLHRHGASITDRGTPDAWRTDGHETNSIFALPTRHHRWRALRRLGAEQLFSPRRVEKQRPLRRDAVRGLLRHVSELAAASGGGTGTAVVDVGRAAFAAMASLLFRSLFSVGIDAATSCRFRDAAREFALLTLTPNVSEFFPVVAMADLQGLRRRTARHITWMYQLIDGHVERRMRGRETAGAHGEKEKDLLDVMLDDLLTAGSETSSAVIEWAMAELLQNPQTMRKLQEELKKVIGSKTYIDEEDIDQLPYLQAVIKETHRLHPAIPLLMYKAAVPVEIQGYKIPKETTVVVNTWAIHQNSEVWIEPDKFIPERFLQKEISLSSGSTNMELVPFSAGRRFCLGYPVANRMLHLMLGSLVHQFQWTLPEVVKKNGGVDMAEKFGLTLSMATPLHAIAKNIV

Function Cytochrome P450 76T24 [UniProtKB/Swiss-Prot:W8JMV1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_12g0006260 OsNaBo_12g0006260.01 Chr12 4956989 4960359 - NAM
CDS seq

atggccatcttcatcggatgcatctgttcacttgcactcttgctgctctgctcccatgtcttccggcttctctcagacgctcgccgccctctcccaccgggcccgaggccgcttccggtcatcggcaacctcctcgacgtcgccggtgagctcccgcaccgctcgttgtcgcgcgtcgcacagcggtacggcccgctggtgacgctccgcctgggcaccacgctcgccgtcgtggcctcctcgccggccatggcgcgcgaggtcctgcacaggcacggcgccagcatcaccgaccgcggcacgccggacgcgtggcgcaccgacgggcacgagaccaactccatcttcgcgttaccgacgcgccaccaccggtggcgcgcgctgcgccggctcggcgccgagcagctgttctcgccgcggcgggtcgagaagcagcgcccgctgcgccgggacgccgtgcgcggcctcctccgccacgtgtcggagctggctgcggcgtccggcggaggcacaggcacggcggtggtcgacgtcgggagggcggcgttcgcggccatggcgagcctgctgttccggtcgctgttctcggtgggcatcgacgccgcgacgtcgtgccggttccgcgacgcggcgcgggagttcgcgctgctgacgctgacgcccaacgtgtcggagttcttcccggtggtggccatggccgatctgcagggccttcggcgaaggacggcgaggcacatcacgtggatgtaccagctgatcgacggccatgtcgaacggcggatgcgtggccgggaaacagccggtgcgcacggggagaaggagaaggacctgcttgatgtgatgctggacgatttactaacggcgggcagtgaaacaagctcagctgtaatagagtgggcaatggccgagctactgcagaatcctcaaactatgagaaaAttgcaagaagagctcaaaaaggtcataggctcaaaaacttatatagatgaagaagacatcgaccaacttccctatcttcaagcagtcatcaaggaaacacataggctacatccagccataccactgctaatgtacaaagcagccgtcccagttgaaatacaagggtataaaatcccCaaagaaaccactgtggtagtaaatacatgggcaattcatcagaattcagaggtttggattgaaccagacaagttcataccagagagattcctacaaaaggagatcagtttgtcatcaggtagtaccaacatggagcttgttccattcagtgccggacgacgtttctgcctcggatatccggtagcaaatagaatgctgcatcttatgcttggctcgctagttcatcagtttcagtggacactgcctgaagtagtgaagaagaacggtggcgtagacatggcagaaaagtttggactaacactgtctatggcgacccccctacatgctatagcaaagaatattgtgtag

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Protein seq

MAIFIGCICSLALLLLCSHVFRLLSDARRPLPPGPRPLPVIGNLLDVAGELPHRSLSRVAQRYGPLVTLRLGTTLAVVASSPAMAREVLHRHGASITDRGTPDAWRTDGHETNSIFALPTRHHRWRALRRLGAEQLFSPRRVEKQRPLRRDAVRGLLRHVSELAAASGGGTGTAVVDVGRAAFAAMASLLFRSLFSVGIDAATSCRFRDAAREFALLTLTPNVSEFFPVVAMADLQGLRRRTARHITWMYQLIDGHVERRMRGRETAGAHGEKEKDLLDVMLDDLLTAGSETSSAVIEWAMAELLQNPQTMRKLQEELKKVIGSKTYIDEEDIDQLPYLQAVIKETHRLHPAIPLLMYKAAVPVEIQGYKIPKETTVVVNTWAIHQNSEVWIEPDKFIPERFLQKEISLSSGSTNMELVPFSAGRRFCLGYPVANRMLHLMLGSLVHQFQWTLPEVVKKNGGVDMAEKFGLTLSMATPLHAIAKNIV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.635802

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0199800 RBH 0.322937 0.557757 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g09500 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os12g0199800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0006190 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0006260 RBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0006270 RBH 0.273435 0.0 2.594404
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0006180 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0006250 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0078300 RBH 1.490917 0.114651 0.032586
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0006220 RBH 0.0 0.107781 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0083800 RBH 0.690317 0 0.047548
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0006120 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0006370 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0006230 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0006240 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0006190 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G006040 RBH 0.0 0.0 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0002390 RBH 0.0 0.0 7.208279
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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