Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_12g0006120 | OGI:12013290 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr12:4934190-4938336 | ||||||||
| Gene Symbol | CYP76M13, CYP76M13 | ||||||||||
| DNA seq | aaattacacactacacaatattctttgctatagcatgtaggggggtcgccatagacagtgttagtccaaacttttctgccatgtctacgccaccgttcttcttcactacttcaggcagtgtccactgaaactgatgaactagcgagccaagcataagatgcagcattctatttgctaccggatatccgaggcagaaacgtcgtccggcactgaatggaacaagctccatgttggtactacctgatgacaaactgatctccttttgtaggaatctctctggtatgaacttgtctggttcaatccaaacctctgaattctgatgaattgcccatgtatttactaccacagtggtttctttggggattttatacccttgtatttcaactgggacggctgctttgtacattagcagtggtatggctggatgtagcctatgtgtttccttgatgactgcttgaagatagggaagttggtcgatgtcttcttcatctatataagtttttgagcctatgacctttttgagctcttcttgcaattttctcatagtttgaggattctgcagtagctcggccattgcccactctattacagctgagcttgtttcactgcccgccgttagtaaatcctgaaattggttaagcaatgtaagtaattttgatcataaaccgaatatctgaacatattgtgcacaattacttcgagatagatgtcacccatggcgttctcactttttttccattacaactgaagaaaaactagtattgttacatgtatacttctatcataagaattaatatatcatcgtgtgcctactaacaaatatctaaagagattagcagatattataaataatgcaaattttgctaaaaggcatcatgatttcgtagttttagctcctgaacacaacaaaagtcaatctttagagaatacactttcaaagtatggttatttgctactgaacaccacattgatcaaaatattcattttcgattgaatagaagagaaaaacggtgcaaaaggcaaatatgccactggccttggtcatttagctagtatatttgtcctttcacactatttaTCtcttttttattaaataaaaatAaatattttaatcaacacgatgtccagtagtaaataaccatgcatactttaaaagtacgttcccaaagatcagctcttaccgtatgtagaagctaaaactgcttagcagccgtgatgccctcccataaaatttgcctttaaataaatatgtaaatatatatccccaacaaacttgtaggagtattgaaaacacatccacgtgcaatagacaaacccagagaaaatatttaaagcttgacaaaaacctaggcagacgattatagaaatcaccttgcgcatgaaatatagTttgttttaaagtgttttcgctcttccaatcttttttttcatgacctaaatagttatAaaaaaattagaaaatagctttgttagagataacgtactctagtgagccggggtcacaggcttccgtctacacattatgttttagtgactacgaagcgacaaactgtcatgtagaagagccatgattaattaatattgatgtcttctaacatcacgttgtttatagctcagtagcaatttttgcctctttctagaacatatgtgcagtgagaaaagttacttttgtgcgtggtttttctgttctgatcaaagggtgatgaattatccaaccttttataatatgttaagaaaggattaactattataaaggtgtaaagtcattggaaaaacatcactaaaaacatgtactcccgttttaaaatagatgacgccgttacccttttatacgacgtttaaccattcgttttattaaaagctaaataaatattatttattttattctaacatgcatgttttgttatatattaaaagaaatttatatatgatttatactttggcatatttgtactaaaattttaaaatatgacatacagtcaaaagataattacaagtaaactgtataatctaataaaaacgtacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagagagagagagagagagggggggatataggccccgtttaaattttttttcccaaaaaacatcacatcaaatctttagacacatgcatgaaacattaaatatagataaatgaaaaaattaattgcatagttaggagggaaatcgcgagatgaatcttttgagcctaattagtccatgattagccataaatgctacagtagtaacccacatgtgctaatgacggatttaattaggctcaaaagattcgtctcacggtttccaggcgagttatgaaattgtttttttcattcgtatccgaaaaacccttccgacatgtgacacatgaaaattttcttttcgtgaactaaataggcccatactccATatatatacttacggccaaaaatgCTcttatcacaccccggttgatggtgaggctgtcgtcattctgctcctgtttctccgatatgtccagcatcacatcaagcaggtccttctccttctccccgtgcgcaccggctgtttcccggccacgcatccgccgttcgacatggccgtcgatcagctggtacatccacgtgatgtgcctcgccgtccttcgccgaaggccctgcagatcggccatggccaccaccgggaagaactccgacacgttgggcgtcagcgtcagcagcgcgaactcccgcgccgcgtcgcggaaccggcacgacgtcgcggcgtcgatgcccaccgagaacagcgacccgaacagcaggctcgccatggccgcgaacgccgccctcccgacgtcgaccaccgccgtgcctgtgcctccgccggacgccgcagccagctccgacacgtggcggaggaggccgcgcacggcgtcccggcgcagcgggcgctgcttctcgacccgccgcggcgagaacagctgctcggcgccgagccggcgcagcgcgcgccaccggtggtggcgcgtcggtaacgcgaagatggagttggtctcgtgcccgtcggtgcgccacgcgtccggcgtgccgcggtcggtgatgctggcgccgtgcctgtgcaggacctcgcgcgccgtggccggcgaggaggccacgacggcgagcgtggtgcccaggcggagcgtcaccagcgggccgtaccgctgtgcgacgcgcgacaacgagcggtGCgggagctcaccggcgacgtcgaggaggttgccgatgaccggaagcggcctcgggcccggtgggagagggcggcgagcgtctgagagaagctggaagacatgggagcagagcagcaagagtgcaagtgaacagatgcatccgatgaagatggccattgattttggaacactggacttttggaacactgccgatctctatatggaaatataaagcattccctcttgaagggtgtgcgttttctgatttgatgtgaggtgacaccgtgacagaaattaacaggaccaaaagtacaaatataaagcattccctgttgaagggtgtgcgtttacacttggctagcaatttcaaaggtacaataattacataactgaacacttccgcttgagtcgtactaggctttcattggccagttttgatgaaggagatactctagcagccattcaagaaatatcctaagcattggttcatccattgctttccattatgtccttgtatggtaatacatggatttcttttccagctgctagttgataataaccttcattcaacaaaaaaaaaaatccctccttaccccctcactgtcttgcagattttggactctccgatctattctaagattcatgtctcaacaccttacctcccgctctgatgatccagttgtccaacggctgacggcgacggtgtagggaagaagaagaggatactggggttaagggtttGggtgtttgaacgaatcaaaacaatccaattaatggcgtaatattccctaaattttagagggaattttctattaaatgtagagtaggcagcctttttctttttttcatataccttcttttcctctgctgattttgtataatgtgtgtgtttatttctagctatattcaaaagccatgagttacacttctga
More
|
||||||||||
| CDS seq | atggccatcttcatcggatgcatctgttcacttgcactcttgctgctctgctcccatgtcttccagcttctctcagacgctcgccgccctctcccaccgggcccgaggccgcttccggtcatcggcaacctcctcgacgtcgccggtgagctcccGCaccgctcgttgtcgcgcgtcgcacagcggtacggcccgctggtgacgctccgcctgggcaccacgctcgccgtcgtggcctcctcgccggccacggcgcgcgaggtcctgcacaggcacggcgccagcatcaccgaccgcggcacgccggacgcgtggcgcaccgacgggcacgagaccaactccatcttcgcgttaccgacgcgccaccaccggtggcgcgcgctgcgccggctcggcgccgagcagctgttctcgccgcggcgggtcgagaagcagcgcccgctgcgccgggacgccgtgcgcggcctcctccgccacgtgtcggagctggctgcggcgtccggcggaggcacaggcacggcggtggtcgacgtcgggagggcggcgttcgcggccatggcgagcctgctgttcgggtcgctgttctcggtgggcatcgacgccgcgacgtcgtgccggttccgcgacgcggcgcgggagttcgcgctgctgacgctgacgcccaacgtgtcggagttcttcccggtggtggccatggccgatctgcagggccttcggcgaaggacggcgaggcacatcacgtggatgtaccagctgatcgacggccatgtcgaacggcggatgcgtggccgggaaacagccggtgcgcacggggagaaggagaaggacctgcttgatgatttactaacggcgggcagtgaaacaagctcagctgtaatagagtgggcaatggccgagctactgcagaatcctcaaactatgagaaaattgcaagaagagctcaaaaaggtcataggctcaaaaacttatatagatgaagaagacatcgaccaacttccctatcttcaagcagtcatcaaggaaacacataggctacatccagccataccactgctaatgtacaaagcagccgtcccagttgaaatacaagggtataaaatccccaaagaaaccactgtggtagtaaatacatgggcaattcatcagaattcagaggtttggattgaaccagacaagttcataccagagagattcctacaaaaggagatcagtttgtcatcaggtagtaccaacatggagcttgttccattcagtgccggacgacgtttctgcctcggatatccggtagcaaatagaatgctgcatcttatgcttggctcgctagttcatcagtttcagtggacactgcctgaagtagtgaagaagaacggtggcgtagacatggcagaaaagtttggactaacactgtctatggcgacccccctacatgctatagcaaagaatattgtgtag
More
|
||||||||||
| Protein seq | MAIFIGCICSLALLLLCSHVFQLLSDARRPLPPGPRPLPVIGNLLDVAGELPHRSLSRVAQRYGPLVTLRLGTTLAVVASSPATAREVLHRHGASITDRGTPDAWRTDGHETNSIFALPTRHHRWRALRRLGAEQLFSPRRVEKQRPLRRDAVRGLLRHVSELAAASGGGTGTAVVDVGRAAFAAMASLLFGSLFSVGIDAATSCRFRDAAREFALLTLTPNVSEFFPVVAMADLQGLRRRTARHITWMYQLIDGHVERRMRGRETAGAHGEKEKDLLDDLLTAGSETSSAVIEWAMAELLQNPQTMRKLQEELKKVIGSKTYIDEEDIDQLPYLQAVIKETHRLHPAIPLLMYKAAVPVEIQGYKIPKETTVVVNTWAIHQNSEVWIEPDKFIPERFLQKEISLSSGSTNMELVPFSAGRRFCLGYPVANRMLHLMLGSLVHQFQWTLPEVVKKNGGVDMAEKFGLTLSMATPLHAIAKNIV |
||||||||||
| Function | Cytochrome P450 76T24 [UniProtKB/Swiss-Prot:W8JMV1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_12g0006120 | OsLima_12g0006120.01 | Chr12 | 4934190 | 4938336 | - | NAM | ||
| CDS seq | atggccatcttcatcggatgcatctgttcacttgcactcttgctgctctgctcccatgtcttccagcttctctcagacgctcgccgccctctcccaccgggcccgaggccgcttccggtcatcggcaacctcctcgacgtcgccggtgagctcccGCaccgctcgttgtcgcgcgtcgcacagcggtacggcccgctggtgacgctccgcctgggcaccacgctcgccgtcgtggcctcctcgccggccacggcgcgcgaggtcctgcacaggcacggcgccagcatcaccgaccgcggcacgccggacgcgtggcgcaccgacgggcacgagaccaactccatcttcgcgttaccgacgcgccaccaccggtggcgcgcgctgcgccggctcggcgccgagcagctgttctcgccgcggcgggtcgagaagcagcgcccgctgcgccgggacgccgtgcgcggcctcctccgccacgtgtcggagctggctgcggcgtccggcggaggcacaggcacggcggtggtcgacgtcgggagggcggcgttcgcggccatggcgagcctgctgttcgggtcgctgttctcggtgggcatcgacgccgcgacgtcgtgccggttccgcgacgcggcgcgggagttcgcgctgctgacgctgacgcccaacgtgtcggagttcttcccggtggtggccatggccgatctgcagggccttcggcgaaggacggcgaggcacatcacgtggatgtaccagctgatcgacggccatgtcgaacggcggatgcgtggccgggaaacagccggtgcgcacggggagaaggagaaggacctgcttgatgatttactaacggcgggcagtgaaacaagctcagctgtaatagagtgggcaatggccgagctactgcagaatcctcaaactatgagaaaattgcaagaagagctcaaaaaggtcataggctcaaaaacttatatagatgaagaagacatcgaccaacttccctatcttcaagcagtcatcaaggaaacacataggctacatccagccataccactgctaatgtacaaagcagccgtcccagttgaaatacaagggtataaaatccccaaagaaaccactgtggtagtaaatacatgggcaattcatcagaattcagaggtttggattgaaccagacaagttcataccagagagattcctacaaaaggagatcagtttgtcatcaggtagtaccaacatggagcttgttccattcagtgccggacgacgtttctgcctcggatatccggtagcaaatagaatgctgcatcttatgcttggctcgctagttcatcagtttcagtggacactgcctgaagtagtgaagaagaacggtggcgtagacatggcagaaaagtttggactaacactgtctatggcgacccccctacatgctatagcaaagaatattgtgtag
More
|
|||||||
| Protein seq | MAIFIGCICSLALLLLCSHVFQLLSDARRPLPPGPRPLPVIGNLLDVAGELPHRSLSRVAQRYGPLVTLRLGTTLAVVASSPATAREVLHRHGASITDRGTPDAWRTDGHETNSIFALPTRHHRWRALRRLGAEQLFSPRRVEKQRPLRRDAVRGLLRHVSELAAASGGGTGTAVVDVGRAAFAAMASLLFGSLFSVGIDAATSCRFRDAAREFALLTLTPNVSEFFPVVAMADLQGLRRRTARHITWMYQLIDGHVERRMRGRETAGAHGEKEKDLLDDLLTAGSETSSAVIEWAMAELLQNPQTMRKLQEELKKVIGSKTYIDEEDIDQLPYLQAVIKETHRLHPAIPLLMYKAAVPVEIQGYKIPKETTVVVNTWAIHQNSEVWIEPDKFIPERFLQKEISLSSGSTNMELVPFSAGRRFCLGYPVANRMLHLMLGSLVHQFQWTLPEVVKKNGGVDMAEKFGLTLSMATPLHAIAKNIV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0199800 | RBH | 0.322937 | 0.557757 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g09500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0199800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0006190 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0006260 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0006270 | RBH | 0.273435 | 0.0 | 2.594404 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0006180 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0006250 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0078300 | RBH | 1.490917 | 0.114651 | 0.032586 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006220 | RBH | 0.0 | 0.107781 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0083800 | RBH | 0.690317 | 0 | 0.047548 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002340 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0006370 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006230 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0006240 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0006190 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G006040 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0006260 | RBH | 0.0 | 0.0 | 0.635802 |
