Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0027200 | OGI:07078280 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:28006535-28012490 | ||||||||
| Gene Symbol | POX5.1, POX5.1, prx113, POX5, POX3006, POX3006, prx114, Osprx114, PO-C1, POC-1, POC1, OsPOC1, Prx14, OsPrx14 | ||||||||||
| DNA seq | caagagctgcttagacaggagtagttgctacgagtacttgctaggaagaaactgcagtgtgctctgttccaaagagtagtgatggcttctgcctcttctcttggcctattactgatgctcgcggcgctggtctccacggccaccgcgcatttgtcgccgacgttctacgacacgtcgtgcccccgagccatgtccatcatcaagagcaccgtgacggccgccgtgaacaacgagccacgcatgggcgcgtctctgctcaggctgcacttccacgactgcttcgtccaagcacgtttccatctcacaaaccaccctgttttttttttttactttgatttaatgccgaaaagtagcaaacaggtttgcctgtctgtcagactacgtgagttagcagcgttgcaagaaaataatcgtggcttaatttttgtctgaatcaacacagggctgtgacgcctcaattttgctggccggaaacgagaggaatgcagccccaaacttttctgtcagaggctacgacgtcatcgacagcatcaagacgcagatcgaggccgtgtgcaagcagaccgtctcctgcgccgacatcctcaccgtcgccgcccgcgactctgtcgtcgcggtaaccatgcatgcatatatcaacgacacaagatatcgagctcgcgattacgaattctgtgatgctgaattgctttatttggtttttaatttggcatgcagcttggaggtccgtcatggagtgttccgctagggagaagggattccaccggagccgctaccgcggcccaggtgattagcagccttgctccttctacagatagcctcgcacagctcatcagcgcgtacgcgagcaagggacttagcgccactgacttggttgctctctcaggtgcacacaatatatataactcctcgatcgatctcctaatcaaccatggaagtgtagtaaacaacagcttgtgttgaaatttgaaaacgatatgtttttgtttcaattatgcaggtgcgcacacgattggtatggcacggtgcaggggcttcaggacgaggctatacaacgagaccaacatcgacgccgccttcgcggcggcgctcaaggccaactgcccggcgacgccgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactaccgcaacctgctgtcgaacaaggggctcctgcactccgaccaggagctgttcagcaacggcagcacggacaacacggtcaggagcttcgcgtccagcgcggcggcgttcggcgccgccttcgcgacggccatggtgaagatggggaacatctcgccgctgaccgggacgcagggacagatcaggctcatctgctccgccgtcaactcgtgatctgatcgaccggtttgtatatatccagacgctgggcactcgacaacatgattaattaccagtgcacgaatgcatcaaggaaagaattccagttgcaattaattacaggtgaaacatacttctccgtcctagattctccgtcctagaaagaatccaatcctaacaatgaaatcttgacacatgttcgttattaggattagaTttttttttcttggaacggagggggtacgctcgtattagcatacgcaattatagtcctttaaaatcgtagagcattcagtgaagatgtcaccgagaatgtcacgaggaatgttactgaatctgcgtccgtttattagcaggtttgcatgcttcttgatctgtaccgacttctctctccaatacaaaatccactcctgttacaagttattttttccctctctcttttttttttttttgagagagaggactcccgctcttgcaatcttgctagacctgttcgtcctccatcttgcagtagcaagattttttgttttctggattgccgtcggccggtgaccacacgcgcgccgccggcgcgagttaagatatctccaccgcctcggcgatattttgctccacgttgcaaaggcccgtgaaggtgacgatttggcccatctatgccggtgagcgtgctactggtggatgggccgtgggccggcttattttcgcggcgcaaaggcctactctttacttggcaggctgccactacttcggcccattaaaattcaccagcggcagaaaatgaaatgcttttttttggcgggtagaaaatgaaatgatttgtttttacaggaaaaaaatgaattgaaaactaaaaaaagctgtcaacgtcgttttaaacattctgaaggtgaaaggaaagcaaaatgactgcacaacggtcagaaaaggagagaattatcttggacaaatgctgaccaatcgattcatctagggttgtgtttcgtctgttagtacggagttccacaccgagtgcacatccggtggattatgttggacctgcacttgtcatgaaatatattgagtgaatgtttctcgtatacgtccttcttttttcattttcttcgcgaaccctttatgttttttcttcttctaaatcatcattcatatgctgctggacacgatattgtaaatacatgtgtttgtatttccagtatttgatttcagtttaagaatcataatgagtgcttaaattttgactaattgtttctgccattcttctcgaggacagtccatatatttgacgtaatctagattctgaacggtgaagttttacctgtatattgaaaattctccaaaaaaaattgacaacattcacaacatatatatgaactactctAaaaaaaatcaagtaaagactcaactcacacattgagaaatgaaattaaaaaacaaatccatcattaattggtactattcacatatgaatttgtctttttatttctcaatgcgcggatcaaatttgaatataatttttggtagaatggtatatgctgtttatactctacattactaattttttaaataattttacaactatatattaaatataaaagaaaaggttatacgcgttgatattctctcggggattagaatccctcttccgtgaaagtaacttacaacttcagattcttctgaatctttgctgatcaactagtataatgtacgggtgtacagattctgattaatcacaaacagatactgagagcagaagaaatatcaatatattgtcattacaacttaattcagtactggccttgattggctgcgattgctgctacagacgctgtggctgaggtagttgaaccgttgcaagctacagccattttgaactgccgcaataacggctgttatggtagcaatcacatccgaacatgcccacgtatgtgatagatcgaaatggcaatggagttcggccccagcttaactgaaatgaactctgcttgattgcatggcagacaaactcattatcatggatgcgagagctgaacattcaactgttacatggtttaaggcgaggccctggtgtcctaactgttaggacattctcttggatcagtgtcacaacagttactgttctggtgctacctacagtagtagtgtactgtactgttatttgtttcctacgagtatatactggtaacccaaagactgtttagtgaaatggatgaccagggatggtggctgttctgttctccttcctccgttttttaatagatgacgccgttgactttttctcacacgtttgatcattcgtcttattcaaaaattttatacaaatgtataagatataaatcacacttaaaatattatgagtgataaaacaactcataacaaaataaattataattacgtaaattttttgaataagataaatggtcaaacatgtgaaaaaagaaagtcaacggcgtaatgtattaaaaaacggaggtagtattccacacttttccactcacttgctcatagaaagttcacgaacacagctgtaactaaagtgacaaagccatgttacgccattgtttcacagacttttcctgcaagcgatgcctgacaattccaaggatatactataattttgcccggtgaaagagggaagcaggggttagtgttggcggttgcaatttaagttgggcgctgtcacccgatcatgtctctcttgggtgcatgcaagccaaattacttcaccacacaacgtgagcacgtcgaatgccaacacacgttggtcaatacttttcatacccacgatcaaaatggctgcacaacgacagtggattgtgaggactaaccctggactggtaaggcatcaaatctgaatgttttgtctctgctggagaagtacagagatatgcaggtaaccaagtgtgctaattaaatctctagctataaatatgcatgggatgcagcactctcctcgcaagccacagccaagtgcagatagctcattgctaggcagagataaacgtatatatctttggttaattgttagtttagcgatggccaaagcaacttgcatttccttgcttgtggtcgtggctctggccaccgcggcgtcggcgcagctgtcggcgacgttctacgacacgtcgtgccccagagccatgtccatcatcaagagcgccgtgaccgccgccgtgaacagcgaaccccgcatgggcgcgtcgctgctcaggctgcacttccatgactgttttgtccaagcaagttccacacataaccagcgcctttgttccattttgacttaaacgttactgcagtatatctctagtcaagcaacttgagtgatatttgaattgaactagaaaagttaaatatatattgtacatgtgtgcatgcagttagatgacatgttcagacaaataaccatatattgtacatgtgtgcatgcagttagatgacaattgacaagcaagacaaataaccatacattcttcctgtttgactaactgtacagggttgcgacgcgtctgttctgttgtcgggaaacgagcaggatgctcctccaaacaaggattctcttagaggctacggcgtcatcgacagcatcaaggcgcagatagaggccgtgtgcaatcagaccgtctcatgcgccgacatccttaccgtcgccgcccgtgactccgtcgtcgctgtaagatcactttccctgcatgcatagcctgcacgcttggtctcgaactctcctctcgatcgattcctgtatggttgtacgtgggaaacggatcctctaacgtgaacttcttcctaacatgatcactaacagtaacaggtgagccggtcagtggtggaactcatatatcagttatcatgttcctctggttttacgtcagatgatccctatccatatatatgacattattaggcttcggcttttgtacttaaccaatggagtaataagcatatgaacgcgcatgcagctgggagggccaacgtggactgtcccgctggggagaagggactctacaggtgcaagcgcggcgctcgcgatcagcgacctccctccttttaccgctagcctccaagaactcgtagacgcattcgccaagaagggccttagcgtaaccgacatggttgctctctcaggtatagatccaccatatatgctcacaaaccatcaaaccaagcaagcttaattttctgcactcctatttcaggcgcgcacacgatcgggcaggcgcagtgctcaaccttcaggggcaggatctacaacgagaccaacatcgactcggccttcgcgacgcaacgccaggccaactgcccacggacatccggcgacatgaacctggcgccgctggacacgacgacggcgaacgcgttcgacaacgcctactacaccaacctgctgtcgaacaagggcctcctgcactcggaccaggtgctcttcaacaacggcagcacggacaacacggtgaggaacttcgcgtccaacgcggcggcgttcagcagcgccttcgcgacggccatggtgaacatggggaacatcgcgcccaagacgggaacaaacggccagatcaggctcagctgctccaaggtgaactcgtaa
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| CDS seq | atggcttctgcctcttctcttggcctattactgatgctcgcggcgctggtctccacggccaccgcgcatttgtcgccgacgttctacgacacgtcgtgcccccgagccatgtccatcatcaagagcaccgtgacggccgccgtgaacaacgagccacgcatgggcgcgtctctgctcaggctgcacttccacgactgcttcgtccaagcaccttggaggtccgtcatggagtgttccgctagggagaagggattccaccggagccgctaccgcggcccagatagcctcgcacagctcatcagcgcgtacgcgagcaagggacttagcgccactgacttggttgctctctcaggtgcgcacacgattggtatggcacggtgcaggggcttcaggacgaggctatacaacgagaccaacatcgacgccgccttcgcggcggcgctcaaggccaactgcccggcgacgccgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactaccgcaacctgctgtcgaacaaggggctcctgcactccgaccaggagctgttcagcaacggcagcacggacaacacggtcaggagcttcgcgtccagcgcggcggcgttcggcgccgccttcgcgacggccatggtgaagatggggaacatctcgccgctgaccgggacgcagggacagatcaggctcatctgctccgccgtcaactctttagcgatggccaaagcaacttgcatttccttgcttgtggtcgtggctctggccaccgcggcgtcggcgcagctgtcggcgacgttctacgacacgtcgtgccccagagccatgtccatcatcaagagcgccgtgaccgccgccgtgaacagcgaaccccgcatgggcgcgtcgctgctcaggctgcacttccatgactgttttctgggagggccaacgtggactgtcccgctggggagaagggactctacaggtgcaagcgcggcgctcgcgatcagcgacctccctccttttaccgctagcctccaagaactcgtagacgcattcgccaagaagggccttagcgtaaccgacatggttgctctctcaggcgcgcacacgatcgggcaggcgcagtgctcaaccttcaggggcaggatctacaacgagaccaacatcgactcggccttcgcgacgcaacgccaggccaactgcccacggacatccggcgacatgaacctggcgccgctggacacgacgacggcgaacgcgttcgacaacgcctactacaccaacctgctgtcgaacaagggcctcctgcactcggaccaggtgctcttcaacaacggcagcacggacaacacggtgaggaacttcgcgtccaacgcggcggcgttcagcagcgccttcgcgacggccatggtgaacatggggaacatcgcgcccaagacgggaacaaacggccagatcaggctcagctgctccaaggtgaactcgtaa
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| Protein seq | MASASSLGLLLMLAALVSTATAHLSPTFYDTSCPRAMSIIKSTVTAAVNNEPRMGASLLRLHFHDCFVQAPWRSVMECSAREKGFHRSRYRGPDSLAQLISAYASKGLSATDLVALSGAHTIGMARCRGFRTRLYNETNIDAAFAAALKANCPATPGSGDGNLAPLDTTTPTAFDNAYYRNLLSNKGLLHSDQELFSNGSTDNTVRSFASSAAAFGAAFATAMVKMGNISPLTGTQGQIRLICSAVNSLAMAKATCISLLVVVALATAASAQLSATFYDTSCPRAMSIIKSAVTAAVNSEPRMGASLLRLHFHDCFLGGPTWTVPLGRRDSTGASAALAISDLPPFTASLQELVDAFAKKGLSVTDMVALSGAHTIGQAQCSTFRGRIYNETNIDSAFATQRQANCPRTSGDMNLAPLDTTTANAFDNAYYTNLLSNKGLLHSDQVLFNNGSTDNTVRNFASNAAAFSSAFATAMVNMGNIAPKTGTNGQIRLSCSKVNS |
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| Function | Peroxidase [UniProtKB/Swiss-Prot:Q05855] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0027200 | OsNaBo_07g0027200.01 | Chr07 | 28006616 | 28012490 | + | NAM | ||
| CDS seq | atggcttctgcctcttctcttggcctattactgatgctcgcggcgctggtctccacggccaccgcgcatttgtcgccgacgttctacgacacgtcgtgcccccgagccatgtccatcatcaagagcaccgtgacggccgccgtgaacaacgagccacgcatgggcgcgtctctgctcaggctgcacttccacgactgcttcgtccaagcaccttggaggtccgtcatggagtgttccgctagggagaagggattccaccggagccgctaccgcggcccagatagcctcgcacagctcatcagcgcgtacgcgagcaagggacttagcgccactgacttggttgctctctcaggtgcgcacacgattggtatggcacggtgcaggggcttcaggacgaggctatacaacgagaccaacatcgacgccgccttcgcggcggcgctcaaggccaactgcccggcgacgccgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactaccgcaacctgctgtcgaacaaggggctcctgcactccgaccaggagctgttcagcaacggcagcacggacaacacggtcaggagcttcgcgtccagcgcggcggcgttcggcgccgccttcgcgacggccatggtgaagatggggaacatctcgccgctgaccgggacgcagggacagatcaggctcatctgctccgccgtcaactctttagcgatggccaaagcaacttgcatttccttgcttgtggtcgtggctctggccaccgcggcgtcggcgcagctgtcggcgacgttctacgacacgtcgtgccccagagccatgtccatcatcaagagcgccgtgaccgccgccgtgaacagcgaaccccgcatgggcgcgtcgctgctcaggctgcacttccatgactgttttctgggagggccaacgtggactgtcccgctggggagaagggactctacaggtgcaagcgcggcgctcgcgatcagcgacctccctccttttaccgctagcctccaagaactcgtagacgcattcgccaagaagggccttagcgtaaccgacatggttgctctctcaggcgcgcacacgatcgggcaggcgcagtgctcaaccttcaggggcaggatctacaacgagaccaacatcgactcggccttcgcgacgcaacgccaggccaactgcccacggacatccggcgacatgaacctggcgccgctggacacgacgacggcgaacgcgttcgacaacgcctactacaccaacctgctgtcgaacaagggcctcctgcactcggaccaggtgctcttcaacaacggcagcacggacaacacggtgaggaacttcgcgtccaacgcggcggcgttcagcagcgccttcgcgacggccatggtgaacatggggaacatcgcgcccaagacgggaacaaacggccagatcaggctcagctgctccaaggtgaactcgtaa
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| Protein seq | MASASSLGLLLMLAALVSTATAHLSPTFYDTSCPRAMSIIKSTVTAAVNNEPRMGASLLRLHFHDCFVQAPWRSVMECSAREKGFHRSRYRGPDSLAQLISAYASKGLSATDLVALSGAHTIGMARCRGFRTRLYNETNIDAAFAAALKANCPATPGSGDGNLAPLDTTTPTAFDNAYYRNLLSNKGLLHSDQELFSNGSTDNTVRSFASSAAAFGAAFATAMVKMGNISPLTGTQGQIRLICSAVNSLAMAKATCISLLVVVALATAASAQLSATFYDTSCPRAMSIIKSAVTAAVNSEPRMGASLLRLHFHDCFLGGPTWTVPLGRRDSTGASAALAISDLPPFTASLQELVDAFAKKGLSVTDMVALSGAHTIGQAQCSTFRGRIYNETNIDSAFATQRQANCPRTSGDMNLAPLDTTTANAFDNAYYTNLLSNKGLLHSDQVLFNNGSTDNTVRNFASNAAAFSSAFATAMVNMGNIAPKTGTNGQIRLSCSKVNS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0027200 | OsNaBo_07g0027200.02 | Chr07 | 28006535 | 28008336 | + | IsoSeq | ||
| CDS seq | atgcagccccaaacttttctgtcagaggctacgacgtcatcgacagcatcaagacgcagatcgaggccgtgtgcaagcagaccgtctcctgcgccgacatcctcaccgtcgccgcccgcgactctgtcgtcgcgcttggaggtccgtcatggagtgttc |
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| Protein seq | MQPQTFLSEATTSSTASRRRSRPCASRPSPAPTSSPSPPATLSSRLEVRHGVF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr07 | 28007252 | 28007420 | + | OsNaBo_07g0027200.02 | OsNaBo_07g0027200.01,OsNaBo_07g0027200.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.971808 | 0.0 | 2.876265 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0677400 | RBH | 6.002136 | 6.183509 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48040 | RBH | 4.479586 | 4.306600 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0677400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027640 | SBH | 2.869101 | 405.604462 | 1.475809 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027650 | SBH | 0.000000 | 18.986893 | 0.229096 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027460 | SBH | 4.093558 | 168.669250 | 0.170569 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027220 | SBH | 2.096577 | 0.711689 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027540 | SBH | 2.323719 | 225.331573 | 1.255002 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0467000 | SBH | 7.3930235 | 1.8622475 | 0.0355715 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028050 | SBH | 1.125385 | 0.019468 | 0.263139 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0480900 | SBH | 4.7324955 | 0.485087 | 0.0138585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027330 | SBH | 0.221365 | 0.326599 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027780 | SBH | 2.550790 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027500 | RBH | 4.002941 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0027830 | RBH | 0.649500 | 0.0 | 0.220872 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027390 | RBH | 2.384264 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027450 | SBH | 1.549415 | 0.000000 | 0.206194 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016630 | SBH | 0.0 | 0.000000 | 0.000000 |
