Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0026340 | OGI:07067180 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:27342686-27366498 | ||||||||
| Gene Symbol | OsSDR110C-MI2, SDR110C-MI2, SDR7-6, OsSDR7-6, TS2, RMP8 | ||||||||||
| DNA seq | gtcaaggagaagcacaccacacctgaatacttgaggtttgaggagggcagctgaagagcaaggcaggatgtacagcgcccttcacctcgttcagaggtactgtgcattctttctcctcactctgtatttcattttagaaaatattttggatatgaaaagaggggcatttcatattgatatgtattgagaagaggttaaatgcgttcggcggctcattcgaatgcagaccttcatggactctgcccactacactatcttttctttcttatagttctttccttgtcatgtagagttaacgtgtattgcgattaatcatgagatgtgttgctcacgaaagatcgcaatactattttttaagtgtctttttagaccctgtttaaatggaactaaaacttttaaatccctatcacatcggatgtttggacactaattataaatattaaacgtagattattaataaaacccatctataatcttggactaattcgcgagacgaatctattgagcataattaatgattagcctatgtgatgctacagtaaacattctctaattatgaatttattaggcttaaaaaatttgtctcgcaaatgagtttttatttatgtaattagttttgtaaataatctatatttaatactctaaattagtgtctaaatatagatactaaagtgtagaaaagtatactttatttgtgtcaaaataatttgactattttaggattgagatggtatataagttagtggcaggcggtaaggatctttttttttTGgaaaaaaatgaagacgagattttatttgtgctttgtgccaggggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggtttacaagtctacttcatatatgcacatccataacaatgttccctatgtttttaggcctttcaaatggggtttatttcttatggaaattcaaaggaaacaaactaatttttatgagaaaaagaattatgttccaaatacaccattgagattgtcaattagtactcgtttcaatcataagtaattaacggcttaactcttacgataagatctttctcatagagaattagaaaagtttgactgaatctagttctaaaagtcaaatatttttcatggatgggaggagctagtataaagttgctccaagatttatgctatgaatactttgaaagaactcaaatgcttacatcaaacacttattttttctcagcttatgtgagcttgaaattaatacacggattacctcggtgtaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatctcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttcaccgtcggcaagcgcctcaacttcgcgcatgcttgagttcagaaaatccgaaaatttgacttccatgtggactttgttttattggaataataattcagagtttgtgtattgattaccagtttgttgtttagatttggtaatagggaaataaggataatcttaatccagaaactatcaattagtttttatacttgacatgtcataaaaatcatctatagaaatttatgtatctaataggtgttttctttaaaataaattattattcaattacatctcttctctcttctttcatccacatttctcatcgtttttatctctcctttcatccatatttctcatcgtttttattcttagttgctatatgtagagttggcttgcatttttttcttcgtgtgatagtgtattaattgctatgaaaactagctcaagtggagggttagaatcctccaaagtagaccataaattctcttctccatctcctttatgttgaagtggagtatcctacctataaattctagctacgccactgctgatagatccagtaggtgtgtgccagccaccaagcaaacaattccttctagaacagggcccaatgcccatactaccaacattgataagggccacttatccctgttccttcatgagaaacgtggggagatgtctgtccctttttaaggacctcagccaccactgatcggtcaaggagaagcacaccacacctgaatacttgaggtttgaggagggcagctgaagagcaaggcaggatgtacagcgccattcacctcgttcagaggtactgtgcattctttctcctcactctgtatttcattttagaaataatttggatatgaaaagaggggcttttcatattcatatgtattgagaagaggctaaatgtattcggcggttcattcgaatgcagaccttcatggactctgcccactacacactacactatctcttcttatgtgcctgtcggaaagagtttctatcagttacagtttctcgtggaatctctggctcttccaaacaatatagtttgtcacctaaattctaagaatttgtagttatagaatttagaaaatgaattaaaaaacagaaacttaaaaactcagctttccggccatattttcataagctggctatcaactagcggattcttaaaattttaagctctccaaataacgcctatagctcttcctttatcatgtcgagttaacatatattgcgattaatcatgagatgtatcgctcaccaaatatcgcaatactattttttaagtgcctttgtagtgtagaaaagtctacgtactccatttgttttacaataattcgactattttgggatggtgatggtatataagtcagtggcaggcggtaaggatcattaagaaaaaatactccctccttccctagatgtttgacgccgttgactttttaaaacatgtttaaccattcgtcttattcaaaaacttttgtgaaatatgtaaaactatatgtatacataaaagtatatttaacaataaatcaaataataggaaaagaattaataattacttaaatttttgaataagatgaacggtcaaacattttaaaaaaaagtcaacggcgtttttggggtggaggaaggaatgaagacgagatttttatggatgacgtggtatttgtgctttgtggcaggggcaagaacagagcagggttgacgatgttgactggattcgtcaacagtttctcctctgtgtcaagacccgaaaggtttacacgtctactccatatatgcacatccataacaatgttccctatgtttttaggcctttcaaatggggtttatttcttatgaaaattcaaaggaaacaaactatttttatttaaaaaATattatgtttcaaatacgccattgagattatcaattagtactcgtttcaatcataaataattaatggcttaactcaaataattaacggcttcactcttacgacaatatctttctcgtagagaattagaaaagtttgactgaattatattatatgtcaaatatttttcattgatgggaggatctagtatataaagtactccctccattttatattatatgtcatttgactttcctttaattaaacctctttatatttgatcaaatttacaaaacaacttagcaacatctacattctacaacaccaaattaaattcattaaatttaaaattgaatatatattttgataataggtttattttatattacaaatgttagtattttttAaaaaataaaacaaaagtcaaacatctggtaatatgaaacggatggagtagtagtactactctgcctctgactatctcaccaatggatttgctccaagaatccaagatttatcctaggaatgctttgaaataactcaaatgccacatcaaacaattctttcctctcagcttatgtgagcttgcaattaatacacggattacctcggtgtaggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggt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| CDS seq | atgatcaacgcagctgggcaacttcttctcagggggaggagcagaggtgttcgtccgatgttctcttccggcctggccgatcgctccttctcctcgtcggcgtcaagctccagaaagttggatgggaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggtcatccttgccgatatccaggacgacctcggccgcgcggtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcacggtggaggcggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggtcgtctcgacgtcgtgtacagcaacgccggcatcgccggcggcgcacctccggccacgctcgcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgccaggtccatggtggcgtgcctcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggcgagctccacggcggtgctcggcaacatcgggcccctcgcgtactccatgtcgaaggcggccgtcgtcggcatggtgcagacgacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacaccatctcgccgcacgccatcccgacggctatggcgctgggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggcttcactgtaggcaaggaatccggccgagcagctagccgcctaccttccgattccccgcgtctagaccgccagctcgccactgcgttgctcgcctataaaaggagcccgagctctcccaaattccccacaccattcccatctctctctcctctttctctccctcgttttgctctctgtaccgccacctatagccgttatgccgcgccttctagcgccgccgtcaccggcggtgcctcgctggagcaccgcccgaggtcgccaccgcctctcctggccgccggccgcggagccgcgccccgctgccgcggcaccttgccgcctcaagccgagcaaagcgagagcaggaagacgaagccgagcctcgcctcccggcgccgccgtcgccgccggagccccaccggagtccgccgccacctccctcggccgctggtcgcctcgccgcgccccatcgccgcgagcatagctgctcacgtattcttctcctcgtcgtcaagatccagaaagttggatggcaaagtggccgtgataaccggcgcagcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggttatcattgccgatatcaaggatgatctcggccgcgccgtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgcctcggccgtcgacctcgccgtggcgcgacacggccgcctcgacgtcgtgtacagcaacgccgccatcgcgggtggcgcgcctccggccacgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgccaggtccatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccccgccgcgccggttgcatcctctgcacggccagcacggcggcggtgctcggcggcatggcggcgccggcgtactccatgtcgaaggcggccgtcgtcggcatggtgcggacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgcagtcccgacgccgatggcgataggtctcttctccgagacgttcccggcggcgaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggggggaagagcatagctgctcaggtgttctccaacggcttggccgatcgcctcttctcctcgtcgtcaagctccagaaagttggatggcaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggttatcattgccgatatccaggacgacctcggccgcgccgtggccgccgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcgtcataggagcaccggctccggcctcgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgcccggtcgatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggccagctcggcggcggtgctcggcggcgtggcgtcgccggtgtactccatgtcgaaggcggccatcgtcggcatggtgcgcgcggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgccatcccgacgccgatggcgctaggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaagggacatcgctggaggtggaagacgtggcgagggcggccgtgttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgacggcggcttcacggtgggcaaagacctcctccgaaatccaccgagctctacttga
More
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| Protein seq | MINAAGQLLLRGRSRGVRPMFSSGLADRSFSSSASSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGGAPPATLAALDLDDYDRVMAVNARSMVACLKHAARVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQTTVARQLARDGVRVNTISPHAIPTAMALGIIAETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGFTVGKESGRAASRLPSDSPRLDRQLATALLAYKRSPSSPKFPTPFPSLSPLSLPRFALCTATYSRYAAPSSAAVTGGASLEHRPRSPPPLLAAGRGAAPRCRGTLPPQAEQSESRKTKPSLASRRRRRRRSPTGVRRHLPRPLVASPRPIAASIAAHVFFSSSSRSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIKDDLGRAVAGELGADAASYTHCDVTVEKDVASAVDLAVARHGRLDVVYSNAAIAGGAPPATLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASTAAVLGGMAAPAYSMSKAAVVGMVRTVARQLARDGVRVNAISPHAVPTPMAIGLFSETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGGKSIAAQVFSNGLADRLFSSSSSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIQDDLGRAVAAELGADAASYTHCDVTVEKDVAAAVDLAVARHGRLDVVYSNAGVIGAPAPASLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASSAAVLGGVASPVYSMSKAAIVGMVRAVARQLARDGVRVNAISPHAIPTPMALGIIAETFPAATAEEVRRMVTREMQELEGTSLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSST |
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| Function | Secoisolariciresinol dehydrogenase (Fragment) [UniProtKB/Swiss-Prot:Q94KL7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0026340 | OsNaBo_07g0026340.02 | Chr07 | 27353009 | 27366498 | + | NAM | ||
| CDS seq | atgatcaacgcagctgggcaacttcttctcagggggaggagcagaggtgttcgtccgatgttctcttccggcctggccgatcgctccttctcctcgtcggcgtcaagctccagaaagttggatgggaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggtcatccttgccgatatccaggacgacctcggccgcgcggtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcacggtggaggcggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggtcgtctcgacgtcgtgtacagcaacgccggcatcgccggcggcgcacctccggccacgctcgcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgccaggtccatggtggcgtgcctcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggcgagctccacggcggtgctcggcaacatcgggcccctcgcgtactccatgtcgaaggcggccgtcgtcggcatggtgcagacgacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacaccatctcgccgcacgccatcccgacggctatggcgctgggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggcttcactgtaggcaaggaatccggccgagcagctagccgcctaccttccgattccccgcgtctagaccgccagctcgccactgcgttgctcgcctataaaaggagcccgagctctcccaaattccccacaccattcccatctctctctcctctttctctccctcgttttgctctctgtaccgccacctatagccgttatgccgcgccttctagcgccgccgtcaccggcggtgcctcgctggagcaccgcccgaggtcgccaccgcctctcctggccgccggccgcggagccgcgccccgctgccgcggcaccttgccgcctcaagccgagcaaagcgagagcaggaagacgaagccgagcctcgcctcccggcgccgccgtcgccgccggagccccaccggagtccgccgccacctccctcggccgctggtcgcctcgccgcgccccatcgccgcgagcatagctgctcacgtattcttctcctcgtcgtcaagatccagaaagttggatggcaaagtggccgtgataaccggcgcagcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggttatcattgccgatatcaaggatgatctcggccgcgccgtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgcctcggccgtcgacctcgccgtggcgcgacacggccgcctcgacgtcgtgtacagcaacgccgccatcgcgggtggcgcgcctccggccacgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgccaggtccatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccccgccgcgccggttgcatcctctgcacggccagcacggcggcggtgctcggcggcatggcggcgccggcgtactccatgtcgaaggcggccgtcgtcggcatggtgcggacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgcagtcccgacgccgatggcgataggtctcttctccgagacgttcccggcggcgaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggggggaagagcatagctgctcaggtgttctccaacggcttggccgatcgcctcttctcctcgtcgtcaagctccagaaagttggatggcaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggttatcattgccgatatccaggacgacctcggccgcgccgtggccgccgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcgtcataggagcaccggctccggcctcgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgcccggtcgatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggccagctcggcggcggtgctcggcggcgtggcgtcgccggtgtactccatgtcgaaggcggccatcgtcggcatggtgcgcgcggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgccatcccgacgccgatggcgctaggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaagggacatcgctggaggtggaagacgtggcgagggcggccgtgttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgacggcggcttcacggtgggcaaagacctcctccgaaatccaccgagctctacttga
More
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| Protein seq | MINAAGQLLLRGRSRGVRPMFSSGLADRSFSSSASSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGGAPPATLAALDLDDYDRVMAVNARSMVACLKHAARVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQTTVARQLARDGVRVNTISPHAIPTAMALGIIAETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGFTVGKESGRAASRLPSDSPRLDRQLATALLAYKRSPSSPKFPTPFPSLSPLSLPRFALCTATYSRYAAPSSAAVTGGASLEHRPRSPPPLLAAGRGAAPRCRGTLPPQAEQSESRKTKPSLASRRRRRRRSPTGVRRHLPRPLVASPRPIAASIAAHVFFSSSSRSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIKDDLGRAVAGELGADAASYTHCDVTVEKDVASAVDLAVARHGRLDVVYSNAAIAGGAPPATLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASTAAVLGGMAAPAYSMSKAAVVGMVRTVARQLARDGVRVNAISPHAVPTPMAIGLFSETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGGKSIAAQVFSNGLADRLFSSSSSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIQDDLGRAVAAELGADAASYTHCDVTVEKDVAAAVDLAVARHGRLDVVYSNAGVIGAPAPASLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASSAAVLGGVASPVYSMSKAAIVGMVRAVARQLARDGVRVNAISPHAIPTPMALGIIAETFPAATAEEVRRMVTREMQELEGTSLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSST
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0026340 | OsNaBo_07g0026340.01 | Chr07 | 27342686 | 27350727 | + | NAM | ||
| CDS seq | atgtacagcgcccttcacctcgttcagaggggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatctcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggtcataggtgtggtgcggtccgccgccggcgagctggcacgccacggcgtgcggctgaacgcgatctcgccgctcggcatcgcgacgccactggcgatgcgcgggttcggcgacatgctggcgtgggcggacgccgagcgggtgaggcggctcatcgaggaggacatgaacgagctagagggcgcgacgctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacgtcaccgggcataacctcgtcgtcgacggcgggttcaccgtcgggaagcggctcaactctgtatactccgaggaacctggaagcgaaccaaatttcacgatgatgagcgtagcagccaacaaaattctcagggggaggagcagaggtgttcgtccgatgttctcttccggcttggccgatcgcctcttctcctcgtcggcgtcaagctccaaaaggttggaagggaaagtggccgtgatcaccggcgcggtgggcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggtcatcctcgccgatatccaggacgaccttggccgcgccatggccgccgagctcggcgcggacgccgcgtcgtacacgcactgcgacgtcaccgtcgaggcggacgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcatcgccggcgccgcggccccgcccacgctctcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgcccggtccatggtggcctgcctcaagcacgcggcgcgcgtcatgtccccgcgccgcgccggctgcatcctctgcacggcgagctccacggcgctgatcggcgacctggcggcgccggcgtactgcatctcgaaggcggccgtcgtcggaatggtgcggacggtggcaaggcagctggcgcgcgacggcgtgcgcgtgaacgccatctcgccgcacatcatcccgacggcgctggtgacgcgcgtcatctccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggacatgcaggagctggaaggggcgtcgctggaggtggaggacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgatggcggcttcacggtcggcaaggacctcctccggaatccaccgagctttgcttga
More
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| Protein seq | MYSALHLVQRGKSRAGLTMLTGFVNRFSSVSRPERLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHAVAAELGPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRAGSILCTASVAGVIGSDVPHAYSVSKAAAIGVVRSAAGELARHGVRLNAISPHGIATPLAMRGFGDVLAWADAERLKRVIEEDMNELEGAKLEAEDIARAAVYLASDEAKYITGHNLVVDGGLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGGEMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERVRRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNSVYSEEPGSEPNFTMMSVAANKILRGRSRGVRPMFSSGLADRLFSSSASSSKRLEGKVAVITGAVGGIGEATAKEFVRNGAKVILADIQDDLGRAMAAELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASSTALIGDLAAPAYCISKAAVVGMVRTVARQLARDGVRVNAISPHIIPTALVTRVISETFPAATAEEVRRMVTRDMQELEGASLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSFA
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0026340 | OsNaBo_07g0026340.03 | Chr07 | 27345449 | 27348080 | + | IsoSeq | ||
| CDS seq | atggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatgg
More
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| Protein seq | MAPRSSSPTYKTISATPSLPSSARARPTPAATSPTRRRSRRPWTLPWRATATLTSCTTTPGSQAPLWGTLPPSTSPTSTASW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.098370 | 0.0 | 0.618520 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0663500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g46920 | RBH | 0.527611 | 0.810907 | 0.610314 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0663600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0026790 | SBH | 0.0 | 0.0 | 0.658171 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0026830 | RBH | 0.0 | 0.0 | 3.480390 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0021660 | RBH | 0.000000 | 0.000000 | 1.110588 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0026390 | RBH | 0.000000 | 0.104732 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0026630 | RBH | 0.0 | 0.000000 | 4.313056 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0455200 | SBH | 1.909187 | 0.9786 | 0.1270485 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0027140 | RBH | 0.0 | 0.0 | 0.567508 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0408700 | RBH | 0.021731 | 0.009898 | 0.7054755 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0026430 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0026850 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0026530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0026850 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0021390 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G021280 | RBH | 0.000000 | 1.747666 | 0.490446 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0026300 | RBH | 0.439231 | 16.591320 | 10.141115 |
