Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_07g0026390 | OGI:07067180 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr07:27642114-27672327 | ||||||||
| Gene Symbol | OsSDR110C-MI2, SDR110C-MI2, OsSDR110C-MI3, SDR110C-MI3, OsSDR110C-MI4, SDR110C-MI4, SDR7-6, OsSDR7-6, RMP8 | ||||||||||
| DNA seq | gattagctcaaagtccacagcgagagatgctcagtttcagagcataaatacactctagaatgctgaattgaccattatcggatcaggaggaccttatgatgcagagaacaatgcagctcgttctcaggtttgatcaccttattagagcagagttcatgtctgttcttgattgctcactaagctgtaaagatgatttggttttctgtttgcgttagggtgaagagatcgtcgggtttactacaccaattctccactgcggcgaactcgcagaggttaatttctttcatgattttctgatcattttgtgttcatgtgtgtggatcatggtgatcgattcgatgcaggttggccgggaaggtggccgtcatcaccggcgccgccagcggcatcggcaaggcgtcggcgaaggagttcatcggcaatggcgccaaggttatactcgccgacgtccaggacgacctcggccgcgccgtcgccgccgagctcggccctggcgcgacgtacacgcggtgcgacgtcacggacgaggcgcaggtcgccgcggcggtggacctcgccgtggcgcgccacggggcgctcgacgtgttctacagcaacgccggcgtcctgggctccatcgcgccggcgccgctcgcctccctggacctgggcgagttcgaccgcgtcatggccgtgaacgcccgcgccgccgtcgccgccgccaagcacgcggcgcgcgccatggtgccgcgccggagcgggtgcgtcctcttcacggggagcgtgtcgggcgtggtgggcggcacggggccgacgtcgtacggcgtgtcgaaggcggccgtgctgggcgtggtgcgcgccgtggccggggagctggcgcgccacggcgtgcgggcgaacgccgtctcgccgtgcggcgtcgcgacgccgctgtccatggtgcaggtccttgaggcctaccccgggatgagcttcgaggagctcaagaacgccatggcggcgtccatggagcagatggaagctggcccgttgatcgaccccgaggacgtggcgagggcggccgtcttcctggcgtccgacgaggccaggtacatcaacggccataacctcgtcgtcgacggcggcttcacggtggggaagctgctcaaaatccccaaggagtagacagtgatcaagagcagtgcaacaagacaagaaaaattgcaggatgcAaaaaaaaaaaaaagaacgaataaggaagagagtctactttgtaccgtgaaatatagactccccaaatttacttttcgctcccaaataaggctgtgttctattggaacttcgcaagtaaaacgaagcgacgaattaacgtatgattaattaagtattagcttaaaagattttttttctttAaaaaaaatgtaccatttaatagtttgagaagcatgtctgtgtaaatgagcgaggtaaggttgggatcctcgagggaagaacacagcctaaggctaagctacaagtccacatattttttttcgaataaggacaagcccacatatttaacatctactccctctgtttcacaatgtaagtcattttagcatttctcatattcatattgatgttaaatactccctccttccctaaatgtttgacgccgttgacttttttaaacatgtttgaccgttcgtcttattcaaaaacttttgtgaaatgtgtaaaactatatgtatacgtaaaagtatacttaacaataaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacaaacggtcaaatatttttttaaaagtcaacggcgtcaaatattttatgatggaaggaatatatgtctagatttattaacatcaatataaatgtgagaaatgctagaatgacataaaatgaataacaataccgaatctaattataagtgcgatgaccaaaatatatactacggagtagatacgaattataatgccatactaatcgtctgaccaatttcctaagcaaaaaatgcagaccactaatcctcgacaaaatccagcttactatcgcactagagtgtatgtacctggggttgcattttcaaaatggggggtttagccggaaggggccgaaattgcaatcactgacctggagtggaagaattttgagggataaaaaggatataaaataatatctccgggtagcaatcaaggccttatttcttttgcaaattgcggtgggagatgtgctccatcaactaccttcatccaaaagaccaaatatagtcattgactaaaattatatactccctccttccccaaatgtttgacaccgttgacttttttaaacatgtttgactgttcgttttattcaaaaacttttgtgatatgtgtaaaactatatgtatacataaaagtatatttaacaataaatcaaatgatagaaaaagaattaacaattacttaaattttttgaataagacgaacggtcaaacatttttaaaaaagtcaacggcgttaaacattttgggatggaagtagtgacatgcaaaagcatgtccacaactactacaacacagcattttgtagaatataaacattaagcaaaaaatttgggacacatatagaagcattagattctagacaaagactagcaagaacatgttgataggacacccaagtggtcaaacttttagttaacgtacgtccacataagactaaattagctgcacactaacatataccacatgatgacctgtaaagtctaaacatttaatcacatgtataagagtttccccactgtaacagcaaggtcaataatatagccagttaatggctccaaaaatttccatatcatctacggccatagtttgagacgcatgatacaataataaactgaagtgaacagatttctgaatattatttttcattttatttattgcattgcatgttcttcatttgcatataacaaggctaactgatgctcatctatttgctagccaatcactgaacctttgcagtatcttggagctcgtgaggagttgacgataatttagtcgccggttgaatctctctctctttaacttttgcttttaactcagctttttaagccacagtggacagctatcgctagcttgaagcatctattgcacctgctctaaaagcctaaccactcgctcacgtactccctccatcccaaaatatttgacaccgttgacttttttaaaaatatttgaccattcgtcttattcaaaaaatttaagtaattattaattctttttttatcatttgatttattgttaaatatacttttatatatacatatagttttacacatttcacaaaagtttttgaataagacgaacggtcaaacatatttaaaaaagtcaacggcgtcaaacatttagagaaggagggagtatatagcagtttccccaatgtaaattctaaacagtaaatcacatatattagagctacccaatttaaagacaaaacatttaatcactcatttctgacttctgagtttccccaatgtaaggtctaatcaccttattaaagagtaaaataaaatagggaagagtttggaactggagtttacataattccatgtttacccatacagaacagaaacacaaaggtatgatcattctgtaaagttgatttgaatccacatgccatgtagaacatgcgcactgcattgtttggtcgacaagagagcttctcattcaccttaagcttactgaattgatttctcttcttttagatatgtacagtcacatactgaatggattaatgcacattatgtatggaattccggtgtgctgaatttccagggtgacacatactgaattgatttctaaacgtataaaacagggagcaatcatgctgcatgctcgtaatttccaaagaaaaataggcatgtgatctgcaagattcaatatataagcacctattttttttttgtatgatctatacctgaagtcctaaacctgctttatctacataacgtcagaaacaagaccattggttactcagctgtgcggccattgcaacagaatactgaaaaagaatgtagttgttttactgctgatctggaaagtgtatctgattgttctgtgcagcatacagtaatttgaagggcattttggctctgcttgcctgcacaatttgtcaaaagccacagcaacaaggaagctaacgtttgagctaaccgcaaacagtgaattttgccgaaatgagatagatgcgaattttcagttatcacagccactaatccctctatcctacaagtattcatatcaacttagaaatgaaaataaatagagatgaaactcacagcgcgatccagcaatcggaccctcgcgccctacaaattcactgccatggattcaaatttactgtagctatgtttggataatgggtttaggggggggattgggatagggatatgagtggagggttgagatgaaacgagatatgaagaatgaacggctaggattaaaagttacccttctagaaggtgggaaggtgggataagatttcccctcctattatccaaacatggcctacaatttttgtttagcagagaaatcgaacctaacatttgaatatttgatgatcggtaggtaaaacatttccatttcaacaacagtggccagttagagcagagaggggatgatgccgacggacgtgacaccgttgatgaggaccatcatcaggtcatgcaaatgcaaccaaaaaaacaaacaaacagtattcttgttgttttcatcatgcgtgggggagagatcgccctttttttattattttttataaggttattttttatccggcctctatatccaaccggatctaccaaatcgcatgtagcctagtggttacaatgatctgagtagcatcttaagatcatgagtttttataggagtgaattttagattagttatttgaggggtttaattccactagtaatatgcgtgggaccatacccatataattggagtttgggtacgtggtggatggattcagaataaaccaagtg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| CDS seq | atgatgcagagaacaatgcagctcgttctcagggtgaagagatcgtcgggtttactacaccaattctccactgcggcgaactcgcagaggttggccgggaaggtggccgtcatcaccggcgccgccagcggcatcggcaaggcgtcggcgaaggagttcatcggcaatggcgccaaggttatactcgccgacgtccaggacgacctcggccgcgccgtcgccgccgagctcggccctggcgcgacgtacacgcggtgcgacgtcacggacgaggcgcaggtcgccgcggcggtggacctcgccgtggcgcgccacggggcgctcgacgtgttctacagcaacgccggcgtcctgggctccatcgcgccggcgccgctcgcctccctggacctgggcgagttcgaccgcgtcatggccgtgaacgcccgcgccgccgtcgccgccgccaagcacgcggcgcgcgccatggtgccgcgccggagcgggtgcgtcctcttcacggggagcgtgtcgggcgtggtgggcggcacggggccgacgtcgtacggcgtgtcgaaggcggccgtgctgggcgtggtgcgcgccgtggccggggagctggcgcgccacggcgtgcgggcgaacgccgtctcgccgtgcggcgtcgcgacgccgctgtccatggtgcaggtccttgaggcctaccccgggatgagcttcgaggagctcaagaacgccatggcggcgtccatggagcagatggaagctggcccgttgatcgaccccgaggacgtggcgagggcggccgtcttcctggcgtccgacgaggccaggtacatcaacggccataacctcgtcgtcgacggcggcttcacggtggggaagctgctcaaaatccccaaggagggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatatcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggtcataggtgtggtgcggtccgccgccggcgagctggcacgccacggcgtgcggctgaacgcgatctcgccgctcggcatcgcgacgccactggcgatgcgcgggttcggcgacatgctggcgtgggcggacgccgagcgggtgaggcggctcatcgaggaggacatgaacgagctagagggcgcgacgctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacgtcaccgggcataacctcgtcgtcgacggcgggttcaccgtcgggaagcggctcaactctgtatactccgaggaacctggaagcgaaccaaatttcacgatgatgagcgtagcagccaacaaaattctcagggggaggagcagaggtgttcgtccgatgttctcttccggcttggccgatcgcctcttctcctcgtcggcgtcaagctccaaaaggttggaagggaaagtggccgtgatcaccggcgcggtgggcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggtcatcctcgccgatatccaggacgaccttggccgcgccatggccgccgagctcggcgcggacgccgcgtcgtacacgcactgcgacgtcaccgtcgaggcggacgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcatcgccggcgccgcggccccgcccacgctctcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgcccggtccatggtggcctgcctcaagcacgcggcgcgcgtcatgtccccgcgccgcgccggctgcatcctctgcacggcgagctccacggcgctgatcggcgacctggcggcgccggcgtactgcatctcgaaggcggccgtcgtcggaatggtgcggacggtggcaaggcagctggcgcgcgacggcgtgcgcgtgaacgccatctcgccgcacatcatcccgacggcgctggtgacgcgcgtcatctccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggacatgcaggagctggaaggggcgtcgctggaggtggaggacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgatggcggcttcacggtcggcaaggacctcctccggaatccaccgagctttgcttga
More
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| Protein seq | MMQRTMQLVLRVKRSSGLLHQFSTAANSQRLAGKVAVITGAASGIGKASAKEFIGNGAKVILADVQDDLGRAVAAELGPGATYTRCDVTDEAQVAAAVDLAVARHGALDVFYSNAGVLGSIAPAPLASLDLGEFDRVMAVNARAAVAAAKHAARAMVPRRSGCVLFTGSVSGVVGGTGPTSYGVSKAAVLGVVRAVAGELARHGVRANAVSPCGVATPLSMVQVLEAYPGMSFEELKNAMAASMEQMEAGPLIDPEDVARAAVFLASDEARYINGHNLVVDGGFTVGKLLKIPKEGKSRAGLTMLTGFVNRFSSVSRPERLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDIGHAVAAELGPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRAGSILCTASVAGVIGSDVPHAYSVSKAAAIGVVRSAAGELARHGVRLNAISPHGIATPLAMRGFGDVLAWADAERLKRVIEEDMNELEGAKLEAEDIARAAVYLASDEAKYITGHNLVVDGGLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGGEMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERVRRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNSVYSEEPGSEPNFTMMSVAANKILRGRSRGVRPMFSSGLADRLFSSSASSSKRLEGKVAVITGAVGGIGEATAKEFVRNGAKVILADIQDDLGRAMAAELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASSTALIGDLAAPAYCISKAAVVGMVRTVARQLARDGVRVNAISPHIIPTALVTRVISETFPAATAEEVRRMVTRDMQELEGASLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSFA |
||||||||||
| Function | Secoisolariciresinol dehydrogenase (Fragment) [UniProtKB/Swiss-Prot:Q94KL7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0026390 | OsARC_07g0026390.01 | Chr07 | 27642114 | 27656380 | + | NAM | ||
| CDS seq | atgatgcagagaacaatgcagctcgttctcagggtgaagagatcgtcgggtttactacaccaattctccactgcggcgaactcgcagaggttggccgggaaggtggccgtcatcaccggcgccgccagcggcatcggcaaggcgtcggcgaaggagttcatcggcaatggcgccaaggttatactcgccgacgtccaggacgacctcggccgcgccgtcgccgccgagctcggccctggcgcgacgtacacgcggtgcgacgtcacggacgaggcgcaggtcgccgcggcggtggacctcgccgtggcgcgccacggggcgctcgacgtgttctacagcaacgccggcgtcctgggctccatcgcgccggcgccgctcgcctccctggacctgggcgagttcgaccgcgtcatggccgtgaacgcccgcgccgccgtcgccgccgccaagcacgcggcgcgcgccatggtgccgcgccggagcgggtgcgtcctcttcacggggagcgtgtcgggcgtggtgggcggcacggggccgacgtcgtacggcgtgtcgaaggcggccgtgctgggcgtggtgcgcgccgtggccggggagctggcgcgccacggcgtgcgggcgaacgccgtctcgccgtgcggcgtcgcgacgccgctgtccatggtgcaggtccttgaggcctaccccgggatgagcttcgaggagctcaagaacgccatggcggcgtccatggagcagatggaagctggcccgttgatcgaccccgaggacgtggcgagggcggccgtcttcctggcgtccgacgaggccaggtacatcaacggccataacctcgtcgtcgacggcggcttcacggtggggaagctgctcaaaatccccaaggagggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatatcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggtcataggtgtggtgcggtccgccgccggcgagctggcacgccacggcgtgcggctgaacgcgatctcgccgctcggcatcgcgacgccactggcgatgcgcgggttcggcgacatgctggcgtgggcggacgccgagcgggtgaggcggctcatcgaggaggacatgaacgagctagagggcgcgacgctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacgtcaccgggcataacctcgtcgtcgacggcgggttcaccgtcgggaagcggctcaactctgtatactccgaggaacctggaagcgaaccaaatttcacgatgatgagcgtagcagccaacaaaattctcagggggaggagcagaggtgttcgtccgatgttctcttccggcttggccgatcgcctcttctcctcgtcggcgtcaagctccaaaaggttggaagggaaagtggccgtgatcaccggcgcggtgggcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggtcatcctcgccgatatccaggacgaccttggccgcgccatggccgccgagctcggcgcggacgccgcgtcgtacacgcactgcgacgtcaccgtcgaggcggacgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcatcgccggcgccgcggccccgcccacgctctcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgcccggtccatggtggcctgcctcaagcacgcggcgcgcgtcatgtccccgcgccgcgccggctgcatcctctgcacggcgagctccacggcgctgatcggcgacctggcggcgccggcgtactgcatctcgaaggcggccgtcgtcggaatggtgcggacggtggcaaggcagctggcgcgcgacggcgtgcgcgtgaacgccatctcgccgcacatcatcccgacggcgctggtgacgcgcgtcatctccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggacatgcaggagctggaaggggcgtcgctggaggtggaggacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgatggcggcttcacggtcggcaaggacctcctccggaatccaccgagctttgcttga
More
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| Protein seq | MMQRTMQLVLRVKRSSGLLHQFSTAANSQRLAGKVAVITGAASGIGKASAKEFIGNGAKVILADVQDDLGRAVAAELGPGATYTRCDVTDEAQVAAAVDLAVARHGALDVFYSNAGVLGSIAPAPLASLDLGEFDRVMAVNARAAVAAAKHAARAMVPRRSGCVLFTGSVSGVVGGTGPTSYGVSKAAVLGVVRAVAGELARHGVRANAVSPCGVATPLSMVQVLEAYPGMSFEELKNAMAASMEQMEAGPLIDPEDVARAAVFLASDEARYINGHNLVVDGGFTVGKLLKIPKEGKSRAGLTMLTGFVNRFSSVSRPERLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDIGHAVAAELGPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRAGSILCTASVAGVIGSDVPHAYSVSKAAAIGVVRSAAGELARHGVRLNAISPHGIATPLAMRGFGDVLAWADAERLKRVIEEDMNELEGAKLEAEDIARAAVYLASDEAKYITGHNLVVDGGLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGGEMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERVRRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNSVYSEEPGSEPNFTMMSVAANKILRGRSRGVRPMFSSGLADRLFSSSASSSKRLEGKVAVITGAVGGIGEATAKEFVRNGAKVILADIQDDLGRAMAAELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASSTALIGDLAAPAYCISKAAVVGMVRTVARQLARDGVRVNAISPHIIPTALVTRVISETFPAATAEEVRRMVTRDMQELEGASLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSFA
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0026390 | OsARC_07g0026390.02 | Chr07 | 27648340 | 27656380 | + | NAM | ||
| CDS seq | atgtacagcgcccttcacctcgttcagaggggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatatcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggtcataggtgtggtgcggtccgccgccggcgagctggcacgccacggcgtgcggctgaacgcgatctcgccgctcggcatcgcgacgccactggcgatgcgcgggttcggcgacatgctggcgtgggcggacgccgagcgggtgaggcggctcatcgaggaggacatgaacgagctagagggcgcgacgctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacgtcaccgggcataacctcgtcgtcgacggcgggttcaccgtcgggaagcggctcaactctgtatactccgaggaacctggaagcgaaccaaatttcacgatgatgagcgtagcagccaacaaaattctcagggggaggagcagaggtgttcgtccgatgttctcttccggcttggccgatcgcctcttctcctcgtcggcgtcaagctccaaaaggttggaagggaaagtggccgtgatcaccggcgcggtgggcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggtcatcctcgccgatatccaggacgaccttggccgcgccatggccgccgagctcggcgcggacgccgcgtcgtacacgcactgcgacgtcaccgtcgaggcggacgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcatcgccggcgccgcggccccgcccacgctctcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgcccggtccatggtggcctgcctcaagcacgcggcgcgcgtcatgtccccgcgccgcgccggctgcatcctctgcacggcgagctccacggcgctgatcggcgacctggcggcgccggcgtactgcatctcgaaggcggccgtcgtcggaatggtgcggacggtggcaaggcagctggcgcgcgacggcgtgcgcgtgaacgccatctcgccgcacatcatcccgacggcgctggtgacgcgcgtcatctccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggacatgcaggagctggaaggggcgtcgctggaggtggaggacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgatggcggcttcacggtcggcaaggacctcctccggaatccaccgagctttgcttga
More
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| Protein seq | MYSALHLVQRGKSRAGLTMLTGFVNRFSSVSRPERLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDIGHAVAAELGPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRAGSILCTASVAGVIGSDVPHAYSVSKAAAIGVVRSAAGELARHGVRLNAISPHGIATPLAMRGFGDVLAWADAERLKRVIEEDMNELEGAKLEAEDIARAAVYLASDEAKYITGHNLVVDGGLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGGEMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERVRRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNSVYSEEPGSEPNFTMMSVAANKILRGRSRGVRPMFSSGLADRLFSSSASSSKRLEGKVAVITGAVGGIGEATAKEFVRNGAKVILADIQDDLGRAMAAELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASSTALIGDLAAPAYCISKAAVVGMVRTVARQLARDGVRVNAISPHIIPTALVTRVISETFPAATAEEVRRMVTRDMQELEGASLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSFA
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0026390 | OsARC_07g0026390.03 | Chr07 | 27658660 | 27672177 | + | NAM | ||
| CDS seq | atgatcaacgcagctgggcaacttcttctcagggggaggagcagaggtgttcgtccgatgttctcttccggcctggccgatcgctccttctcctcgtcggcgtcaagctccagaaagttggatgggaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggtcatccttgccgatatccaggacgacctcggccgcgcggtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcacggtggaggcggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggtcgtctcgacgtcgtgtacagcaacgccggcatcgccggcggcgcacctccggccacgctcgcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgccaggtccatggtggcgtgcctcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggcgagctccacggcggtgctcggcaacatcgggcccctcgcgtactccatgtcgaaggcggccgtcgtcggcatggtgcagacgacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacaccatctcgccgcacgccatcccgacggctatggcgctgggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggcttcactgtaggcaaggaatccggccgagcagctagccgcctaccttccgattccccgcgtctagaccgccagctcgccactgcgttgctcgcctataaaaggagcccgagctctcccaaattccccacaccattcccatctctctctcctctttctctccctcgttttgctctctgtaccgccacctatagccgttatgccgcgccttctagcgccgccgtcaccggcggtgcctcgctggagcaccgcccgaggtcgccaccgcctctcctggccgccggccgcggagccgcgccccgctgccgcggcaccttgccgcctcaagccgagcaaagcgagagcaggaagacgaagccgagcctcgcctcccggcgccgccgtcgccgccggagccccaccggagtccgccgccacctccctcggccgctggtcgcctcgccgcgccccatcgccgcgagcatagctgctcacgtattcttctcctcgtcgtcaagatccagaaagttggatggcaaagtggccgtgataaccggcgcagcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggttatcattgccgatatcaaggatgatctcggccgcgccgtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgcctcggccgtcgacctcgccgtggcgcgacacggccgcctcgacgtcgtgtacagcaacgccgccatcgcgggtggcgcgcctccggccacgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgccaggtccatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccccgccgcgccggttgcatcctctgcacggccagcacggcggcggtgctcggcggcatggcggcgccggcgtactccatgtcgaaggcggccgtcgtcggcatggtgcggacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgcagtcccgacgccgatggcgataggtctcttctccgagacgttcccggcggcgaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggggggaagagcatagctgctcaggtgttctccaacggcttggccgatcgcctcttctcctcgtcgtcaagctccagaaagttggatggcaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggttatcattgccgatatccaggacgacctcggccgcgccgtggccgccgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcgtcataggagcaccggctccggcctcgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgcccggtcgatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggccagctcggcggcggtgctcggcggcgtggcgtcgccggtgtactccatgtcgaaggcggccatcgtcggcatggtgcgcgcggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgccatcccgacgccgatggcgctaggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaagggacatcgctggaggtggaagacgtggcgagggcggccgtgttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgacggcggcttcacggtgggcaaagacctcctccgaaatccaccgagctctacttga
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| Protein seq | MINAAGQLLLRGRSRGVRPMFSSGLADRSFSSSASSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGGAPPATLAALDLDDYDRVMAVNARSMVACLKHAARVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQTTVARQLARDGVRVNTISPHAIPTAMALGIIAETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGFTVGKESGRAASRLPSDSPRLDRQLATALLAYKRSPSSPKFPTPFPSLSPLSLPRFALCTATYSRYAAPSSAAVTGGASLEHRPRSPPPLLAAGRGAAPRCRGTLPPQAEQSESRKTKPSLASRRRRRRRSPTGVRRHLPRPLVASPRPIAASIAAHVFFSSSSRSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIKDDLGRAVAGELGADAASYTHCDVTVEKDVASAVDLAVARHGRLDVVYSNAAIAGGAPPATLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASTAAVLGGMAAPAYSMSKAAVVGMVRTVARQLARDGVRVNAISPHAVPTPMAIGLFSETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGGKSIAAQVFSNGLADRLFSSSSSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIQDDLGRAVAAELGADAASYTHCDVTVEKDVAAAVDLAVARHGRLDVVYSNAGVIGAPAPASLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASSAAVLGGVASPVYSMSKAAIVGMVRAVARQLARDGVRVNAISPHAIPTPMALGIIAETFPAATAEEVRRMVTREMQELEGTSLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSST
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0026390 | OsARC_07g0026390.04 | Chr07 | 27671105 | 27672327 | + | IsoSeq | ||
| CDS seq | atgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcg |
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| Protein seq | MSPRPSTSPWRATAASTSSTATPA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.104732 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0663800 | RBH | 0.0 | 0.776512 | 0.933828 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g46980 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0665000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0021740 | SBH | 0.000000 | 0.000000 | 2.932166 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0021770 | RBH | 0.000000 | 0.491076 | 0.081963 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0021660 | SBH | 0.000000 | 0.000000 | 1.110588 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0026380 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0026640 | RBH | 0.0 | 0.263647 | 7.292994 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0455000 | RBH | 0 | 0.077921 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0027140 | SBH | 0.0 | 0.0 | 0.567508 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0467900 | RBH | 8.298563 | 0.2272345 | 0.031885 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0026350 | RBH | 0.034735 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0021510 | RBH | 0.000000 | 1.474897 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0026530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0026870 | SBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0026360 | RBH | 1.103667 | 21.363941 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G021280 | RBH | 0.000000 | 1.747666 | 0.490446 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0026340 | RBH | 0.098370 | 0.0 | 0.618520 |
