Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsNaBo_03g0012690		OGI:03026160 \| 16/16			NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)			Chr03:9831342-9834750		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		OsCrRLK1L7
DNA seq		gcccaactaatcaaatacccatatgctaaacacaagcttgatcaaacaCcccccatctcaaccaacaacaaaacaagttctcattccacaagccctttcatcactacaaagcctacaaaactcgagtattatcttcatccatccctaatccaaccaggcacaggctcagttctcctgttggtagcagttgccttccctgttcctagcttcacatcgtcgtcgtcaagctgcaggtttctgaacaagagatcgtcacccatgcggccatggtggggcaacctactctgatcagcttggctctggttctattctagcctagagcgcgttgatcgatcgccgatgctctggcggccggagttcttgcgccatggcaaccgttcTtTGAGATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGgtgttcgtcgacgggtacacgcccaagaacggcacggccgtggtcagggagttctccgtgaacatcaccggtagggcgctggtgatcacgttcacgccgacgggcaagaaggtggcgttcgtcaacgccatcgaggtggtgtcccatcccgacgagctcatcggcgacaccgcgccgatggtgaatccgcggaaccagtcccagtacaccgggttgacggcgaaggcgctggagacggtgcaccggatcaacatgggagagcccaaggtcacgccgaacaacgacacgctgtggaggacatggctgccggactggaccttcctgcacgagagcagcttcgcggcgcacaatcaagtgtctccggcgatgatcaagtaccaaagtggctacgcgacctcgctgacggcgccctccgcggtgtacaccaccgtgacggagttgaacacgacggcggcgatggtcggcaacacgcaggcgcagctcaacctgacgtggaagttcgacgcaccggccgtctcggactacctcctccggctccacttgtgcgacatcgtcagcaaggcgacgctcggtgtggtgttcaatgtctacgtcggccagtggcgggttctccaagactacgagtcttccggcgacacgttcagccttcttgccacgccgctctataaggacttcgtccttgccgccagtgatgcggcgaagggtacaatcacggtgagcatcgggtcatcgacggcaaccaacgcgttgcccggcggcttcctgaacggcctcgagatcatgagaattgtcgggagcaccggctccatcgacggcgccacgtcgccgcgcggctcaaagatcaagaccgggatcatcgccggatcggctgtgggcggggcggtgttggcgattgctctcgggtgcgtcgccgtcaggatgctgcggaggaagaagaagccggtgaagcagccgtcgaacacctgggtgccgttctcggcgagcgcgctgggcgcccgctctcgcaccagcttcggcaggagcagcatcgtcaacgtcgtcacgctggggcagaacggcgccggcgccggcgccgggtaccgcttcccgttcgcggcgctgcaggaggcgacgggcgggttcgaggaggagatggtgatcggcgtgggcgggttcgggaaggtgtacaggggcacgctccgggacggcacgcaggtggccgtgaagcgcgggaaccggctgtcgcagcaggggctcaacgagttccgcacggagatcgagctgctgtcccagctgcgccaccgccacctcgtctcgctcatcggctactgcgacgagcgcggcgagatgatCctggtgtacgagtacatggcgaagggcacgctccggagccacctgtacggctccgacctgccgccgctgccgtggaagcagaggctggaggcgtgcatcggggccgcgagggggctgcactacctgcacaccggctcggccaaggcgatcatccaccgggacgtcaagtcggccaacatcctcctcgacgacggcttcatggccaaggtcgccgacttcgggctgtccaagaccgggccggagctggacaagacgcacgtcagcaccgccgtcaagggcagcttcgggtacctcgacccggagtacttccggcggcagatgctgacggagaagtccgacgtctactccttcggcgtcgtcctgctcgaggtgctctgcgcccgcgccgtcatcgacccgacgctgccccgggagatggtgaacctggcggagtgggcgacgcggcggctcagggacggcgagctcgaccggatcgtggaccagaagattgccgggacgatacggccagactcgctcaagaagttcgccgacaccgccgagaagtgcctcgcggagtacggcgtggagcggccgagcatgggggacgtgctctggtgcctcgagtacgcgctgcagctgcaggtggcgtcgccggacagctctgtcacgacgcttcagcgcagctcgtcgatctcaagcgtcgtgacagacgccaccgtgagtgcgaacctgggggacctcgacggcatgtccatgaagagagtaTtttcaaagatgctcaagagcgaggaagagggcaggtgaaggattgaagcaagaaatgttctagtatactagcatctggtacacaataggattgcgtatatctcaattttgatcttatatgcatgtAaatttcaacaaatgatgtacaTtttttttttgcatgtaggagaaagatgcactaaactgcattatggtacagtgataggataccacagttggcaatgtaggagtatatcacgccagtaaacacaatgcaaatgcaaagcaacacaccagtaataacgagtatatattctcacgaataaacgaacAaaataggcagaatcttgtctgaacaacttagaatccagagactgcagcaggaagtcactccctccatgtgtgactccggcacattcacaaatactagtactaaacaaaatttcatgaatgcaagtgcaagacgaccaagatcatagcagctgagcaggcaaacatgctgtctctccagcacattcacaaataacaatcttagttacaatgaataaatgcggtctgtgtcgctgcctgattatgagttc More
CDS seq		ATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGgtgttcgtcgacgggtacacgcccaagaacggcacggccgtggtcagggagttctccgtgaacatcaccggtagggcgctggtgatcacgttcacgccgacgggcaagaaggtggcgttcgtcaacgccatcgaggtggtgtcccatcccgacgagctcatcggcgacaccgcgccgatggtgaatccgcggaaccagtcccagtacaccgggttgacggcgaaggcgctggagacggtgcaccggatcaacatgggagagcccaaggtcacgccgaacaacgacacgctgtggaggacatggctgccggactggaccttcctgcacgagagcagcttcgcggcgcacaatcaagtgtctccggcgatgatcaagtaccaaagtggctacgcgacctcgctgacggcgccctccgcggtgtacaccaccgtgacggagttgaacacgacggcggcgatggtcggcaacacgcaggcgcagctcaacctgacgtggaagttcgacgcaccggccgtctcggactacctcctccggctccacttgtgcgacatcgtcagcaaggcgacgctcggtgtggtgttcaatgtctacgtcggccagtggcgggttctccaagactacgagtcttccggcgacacgttcagccttcttgccacgccgctctataaggacttcgtccttgccgccagtgatgcggcgaagggtacaatcacggtgagcatcgggtcatcgacggcaaccaacgcgttgcccggcggcttcctgaacggcctcgagatcatgagaattgtcgggagcaccggctccatcgacggcgccacgtcgccgcgcggctcaaagatcaagaccgggatcatcgccggatcggctgtgggcggggcggtgttggcgattgctctcgggtgcgtcgccgtcaggatgctgcggaggaagaagaagccggtgaagcagccgtcgaacacctgggtgccgttctcggcgagcgcgctgggcgcccgctctcgcaccagcttcggcaggagcagcatcgtcaacgtcgtcacgctggggcagaacggcgccggcgccggcgccgggtaccgcttcccgttcgcggcgctgcaggaggcgacgggcgggttcgaggaggagatggtgatcggcgtgggcgggttcgggaaggtgtacaggggcacgctccgggacggcacgcaggtggccgtgaagcgcgggaaccggctgtcgcagcaggggctcaacgagttccgcacggagatcgagctgctgtcccagctgcgccaccgccacctcgtctcgctcatcggctactgcgacgagcgcggcgagatgatCctggtgtacgagtacatggcgaagggcacgctccggagccacctgtacggctccgacctgccgccgctgccgtggaagcagaggctggaggcgtgcatcggggccgcgagggggctgcactacctgcacaccggctcggccaaggcgatcatccaccgggacgtcaagtcggccaacatcctcctcgacgacggcttcatggccaaggtcgccgacttcgggctgtccaagaccgggccggagctggacaagacgcacgtcagcaccgccgtcaagggcagcttcgggtacctcgacccggagtacttccggcggcagatgctgacggagaagtccgacgtctactccttcggcgtcgtcctgctcgaggtgctctgcgcccgcgccgtcatcgacccgacgctgccccgggagatggtgaacctggcggagtgggcgacgcggcggctcagggacggcgagctcgaccggatcgtggaccagaagattgccgggacgatacggccagactcgctcaagaagttcgccgacaccgccgagaagtgcctcgcggagtacggcgtggagcggccgagcatgggggacgtgctctggtgcctcgagtacgcgctgcagctgcaggtggcgtcgccggacagctctgtcacgacgcttcagcgcagctcgtcgatctcaagcgtcgtgacagacgccaccgtgagtgcgaacctgggggacctcgacggcatgtccatgaagagagtaTtttcaaagatgctcaagagcgaggaagagggcaggagaaagatgcactaa More
Protein seq		MLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVITFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFDAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIALGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGRRKMH
Function		Receptor-like protein kinase HERK 1 [UniProtKB/Swiss-Prot:Q9LX66]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsNaBo_03g0012690	OsNaBo_03g0012690.01	Chr03	9831342	9834750	+	NAM
CDS seq	ATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGgtgttcgtcgacgggtacacgcccaagaacggcacggccgtggtcagggagttctccgtgaacatcaccggtagggcgctggtgatcacgttcacgccgacgggcaagaaggtggcgttcgtcaacgccatcgaggtggtgtcccatcccgacgagctcatcggcgacaccgcgccgatggtgaatccgcggaaccagtcccagtacaccgggttgacggcgaaggcgctggagacggtgcaccggatcaacatgggagagcccaaggtcacgccgaacaacgacacgctgtggaggacatggctgccggactggaccttcctgcacgagagcagcttcgcggcgcacaatcaagtgtctccggcgatgatcaagtaccaaagtggctacgcgacctcgctgacggcgccctccgcggtgtacaccaccgtgacggagttgaacacgacggcggcgatggtcggcaacacgcaggcgcagctcaacctgacgtggaagttcgacgcaccggccgtctcggactacctcctccggctccacttgtgcgacatcgtcagcaaggcgacgctcggtgtggtgttcaatgtctacgtcggccagtggcgggttctccaagactacgagtcttccggcgacacgttcagccttcttgccacgccgctctataaggacttcgtccttgccgccagtgatgcggcgaagggtacaatcacggtgagcatcgggtcatcgacggcaaccaacgcgttgcccggcggcttcctgaacggcctcgagatcatgagaattgtcgggagcaccggctccatcgacggcgccacgtcgccgcgcggctcaaagatcaagaccgggatcatcgccggatcggctgtgggcggggcggtgttggcgattgctctcgggtgcgtcgccgtcaggatgctgcggaggaagaagaagccggtgaagcagccgtcgaacacctgggtgccgttctcggcgagcgcgctgggcgcccgctctcgcaccagcttcggcaggagcagcatcgtcaacgtcgtcacgctggggcagaacggcgccggcgccggcgccgggtaccgcttcccgttcgcggcgctgcaggaggcgacgggcgggttcgaggaggagatggtgatcggcgtgggcgggttcgggaaggtgtacaggggcacgctccgggacggcacgcaggtggccgtgaagcgcgggaaccggctgtcgcagcaggggctcaacgagttccgcacggagatcgagctgctgtcccagctgcgccaccgccacctcgtctcgctcatcggctactgcgacgagcgcggcgagatgatCctggtgtacgagtacatggcgaagggcacgctccggagccacctgtacggctccgacctgccgccgctgccgtggaagcagaggctggaggcgtgcatcggggccgcgagggggctgcactacctgcacaccggctcggccaaggcgatcatccaccgggacgtcaagtcggccaacatcctcctcgacgacggcttcatggccaaggtcgccgacttcgggctgtccaagaccgggccggagctggacaagacgcacgtcagcaccgccgtcaagggcagcttcgggtacctcgacccggagtacttccggcggcagatgctgacggagaagtccgacgtctactccttcggcgtcgtcctgctcgaggtgctctgcgcccgcgccgtcatcgacccgacgctgccccgggagatggtgaacctggcggagtgggcgacgcggcggctcagggacggcgagctcgaccggatcgtggaccagaagattgccgggacgatacggccagactcgctcaagaagttcgccgacaccgccgagaagtgcctcgcggagtacggcgtggagcggccgagcatgggggacgtgctctggtgcctcgagtacgcgctgcagctgcaggtggcgtcgccggacagctctgtcacgacgcttcagcgcagctcgtcgatctcaagcgtcgtgacagacgccaccgtgagtgcgaacctgggggacctcgacggcatgtccatgaagagagtaTtttcaaagatgctcaagagcgaggaagagggcaggtga More
Protein seq	MLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVITFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFDAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIALGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsNaBo_03g0012690	OsNaBo_03g0012690.02	Chr03	9831342	9834654	+	NAM
CDS seq	ATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGgtgttcgtcgacgggtacacgcccaagaacggcacggccgtggtcagggagttctccgtgaacatcaccggtagggcgctggtgatcacgttcacgccgacgggcaagaaggtggcgttcgtcaacgccatcgaggtggtgtcccatcccgacgagctcatcggcgacaccgcgccgatggtgaatccgcggaaccagtcccagtacaccgggttgacggcgaaggcgctggagacggtgcaccggatcaacatgggagagcccaaggtcacgccgaacaacgacacgctgtggaggacatggctgccggactggaccttcctgcacgagagcagcttcgcggcgcacaatcaagtgtctccggcgatgatcaagtaccaaagtggctacgcgacctcgctgacggcgccctccgcggtgtacaccaccgtgacggagttgaacacgacggcggcgatggtcggcaacacgcaggcgcagctcaacctgacgtggaagttcgacgcaccggccgtctcggactacctcctccggctccacttgtgcgacatcgtcagcaaggcgacgctcggtgtggtgttcaatgtctacgtcggccagtggcgggttctccaagactacgagtcttccggcgacacgttcagccttcttgccacgccgctctataaggacttcgtccttgccgccagtgatgcggcgaagggtacaatcacggtgagcatcgggtcatcgacggcaaccaacgcgttgcccggcggcttcctgaacggcctcgagatcatgagaattgtcgggagcaccggctccatcgacggcgccacgtcgccgcgcggctcaaagatcaagaccgggatcatcgccggatcggctgtgggcggggcggtgttggcgattgctctcgggtgcgtcgccgtcaggatgctgcggaggaagaagaagccggtgaagcagccgtcgaacacctgggtgccgttctcggcgagcgcgctgggcgcccgctctcgcaccagcttcggcaggagcagcatcgtcaacgtcgtcacgctggggcagaacggcgccggcgccggcgccgggtaccgcttcccgttcgcggcgctgcaggaggcgacgggcgggttcgaggaggagatggtgatcggcgtgggcgggttcgggaaggtgtacaggggcacgctccgggacggcacgcaggtggccgtgaagcgcgggaaccggctgtcgcagcaggggctcaacgagttccgcacggagatcgagctgctgtcccagctgcgccaccgccacctcgtctcgctcatcggctactgcgacgagcgcggcgagatgatCctggtgtacgagtacatggcgaagggcacgctccggagccacctgtacggctccgacctgccgccgctgccgtggaagcagaggctggaggcgtgcatcggggccgcgagggggctgcactacctgcacaccggctcggccaaggcgatcatccaccgggacgtcaagtcggccaacatcctcctcgacgacggcttcatggccaaggtcgccgacttcgggctgtccaagaccgggccggagctggacaagacgcacgtcagcaccgccgtcaagggcagcttcgggtacctcgacccggagtacttccggcggcagatgctgacggagaagtccgacgtctactccttcggcgtcgtcctgctcgaggtgctctgcgcccgcgccgtcatcgacccgacgctgccccgggagatggtgaacctggcggagtgggcgacgcggcggctcagggacggcgagctcgaccggatcgtggaccagaagattgccgggacgatacggccagactcgctcaagaagttcgccgacaccgccgagaagtgcctcgcggagtacggcgtggagcggccgagcatgggggacgtgctctggtgcctcgagtacgcgctgcagctgcaggtggcgtcgccggacagctctgtcacgacgcttcagcgcagctcgtcgatctcaagcgtcgtgacagacgccaccgtgagtgcgaacctgggggacctcgacggcatgtccatgaagagagtaTtttcaaagatgctcaagagcgaggaagagggcaggtga More
Protein seq	MLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVITFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFDAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIALGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsNaBo_03g0012690	OsNaBo_03g0012690.03	Chr03	9831342	9834654	+	NAM
CDS seq	ATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGgtgttcgtcgacgggtacacgcccaagaacggcacggccgtggtcagggagttctccgtgaacatcaccggtagggcgctggtgatcacgttcacgccgacgggcaagaaggtggcgttcgtcaacgccatcgaggtggtgtcccatcccgacgagctcatcggcgacaccgcgccgatggtgaatccgcggaaccagtcccagtacaccgggttgacggcgaaggcgctggagacggtgcaccggatcaacatgggagagcccaaggtcacgccgaacaacgacacgctgtggaggacatggctgccggactggaccttcctgcacgagagcagcttcgcggcgcacaatcaagtgtctccggcgatgatcaagtaccaaagtggctacgcgacctcgctgacggcgccctccgcggtgtacaccaccgtgacggagttgaacacgacggcggcgatggtcggcaacacgcaggcgcagctcaacctgacgtggaagttcgacgcaccggccgtctcggactacctcctccggctccacttgtgcgacatcgtcagcaaggcgacgctcggtgtggtgttcaatgtctacgtcggccagtggcgggttctccaagactacgagtcttccggcgacacgttcagccttcttgccacgccgctctataaggacttcgtccttgccgccagtgatgcggcgaagggtacaatcacggtgagcatcgggtcatcgacggcaaccaacgcgttgcccggcggcttcctgaacggcctcgagatcatgagaattgtcgggagcaccggctccatcgacggcgccacgtcgccgcgcggctcaaagatcaagaccgggatcatcgccggatcggctgtgggcggggcggtgttggcgattgctctcgggtgcgtcgccgtcaggatgctgcggaggaagaagaagccggtgaagcagccgtcgaacacctgggtgccgttctcggcgagcgcgctgggcgcccgctctcgcaccagcttcggcaggagcagcatcgtcaacgtcgtcacgctggggcagaacggcgccggcgccggcgccgggtaccgcttcccgttcgcggcgctgcaggaggcgacgggcgggttcgaggaggagatggtgatcggcgtgggcgggttcgggaaggtgtacaggggcacgctccgggacggcacgcaggtggccgtgaagcgcgggaaccggctgtcgcagcaggggctcaacgagttccgcacggagatcgagctgctgtcccagctgcgccaccgccacctcgtctcgctcatcggctactgcgacgagcgcggcgagatgatCctggtgtacgagtacatggcgaagggcacgctccggagccacctgtacggctccgacctgccgccgctgccgtggaagcagaggctggaggcgtgcatcggggccgcgagggggctgcactacctgcacaccggctcggccaaggcgatcatccaccgggacgtcaagtcggccaacatcctcctcgacgacggcttcatggccaaggtcgccgacttcgggctgtccaagaccgggccggagctggacaagacgcacgtcagcaccgccgtcaagggcagcttcgggtacctcgacccggagtacttccggcggcagatgctgacggagaagtccgacgtctactccttcggcgtcgtcctgctcgaggtgctctgcgcccgcgccgtcatcgacccgacgctgccccgggagatggtgaacctggcggagtgggcgacgcggcggctcagggacggcgagctcgaccggatcgtggaccagaagattgccgggacgatacggccagactcgctcaagaagttcgccgacaccgccgagaagtgcctcgcggagtacggcgtggagcggccgagcatgggggacgtgctctggtgcctcgagtacgcgctgcagctgcaggtggcgtcgccggacagctctgtcacgacgcttcagcgcagctcgtcgatctcaagcgtcgtgacagacgccaccgtgagtgcgaacctgggggacctcgacggcatgtccatgaagagagtaTtttcaaagatgctcaagagcgaggaagagggcaggagaaagatgcactaa More
Protein seq	MLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVITFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFDAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIALGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGRRKMH More

Event Type	Chromosome	Start	End	Strand	Alternative mRNAs	Total mRNAs	Source
RI	Chr03	9831342	9834654	+	OsNaBo_03g0012690.02	OsNaBo_03g0012690.03,OsNaBo_03g0012690.02	All
A5	Chr03	9834225	9834357	+	OsNaBo_03g0012690.01	OsNaBo_03g0012690.01,OsNaBo_03g0012690.03	All

Expression

	Leaf	Root	Panicle
FPKM	1.407892	6.715055	1.975407

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_03g0281500	RBH	1.209835	2.074864	2.506224
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os03g17300	RBH	0.250737	0.000000	0.000000
Nipponbare \| IRGSP 1.0 \| RAP-db	Os03g0281500	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_03g0013240	RBH	0.314434	0.000000	1.623985
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_03g0013050	RBH	0.533063	2.308719	0.926998
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_03g0013070	RBH	1.866023	6.047142	1.874717
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_03g0013040	RBH	0.158874	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_03g0012900	RBH	3.384600	3.888426	6.890939
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_03G0164300	RBH	0.0156105	0.1929415	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_03g0012810	RBH	0.501178	0.217931	0.000000
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_03G0165600	RBH	0.1102555	0.0150935	0
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_03g0012970	RBH	0.080797	0.079005	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_03g0012990	RBH	0.000000	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_03g0013050	RBH	10.574743	1.909349	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_03g0012920	RBH	0.000000	0.143920	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_03g0012880	RBH	0.070889	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_03G012840	RBH	0.243222	0.101027	0.500830
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0003580	SBH	0.122708	2.686569	0.302200

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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