Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_03g0013040 OGI:03026160 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr03:9961534-9964942
Gene Symbol OsCrRLK1L7
DNA seq

GCCCAACTAATCAAATACCCATATGCTAAACACAAGCTTGATCAAACACCCCCCATCTCAACCAACAACAAAACAAGTTCTTATTCCACAAGCCCTTTCATCACTACAAAGCCTACAAAACTCGAGTATTATCTTCATCCATCCCTAATCCAACCAGGCACAGGCTCAGTTCTCCTGTTGGTAGCAGTTGCCTTCCCTGTTCCTAGCTTCACATCGTCGTCGTCAAGCTGCAGGTTTCTGAACAAGAGATCGTCACCCATGCGGCCATGGTGGGGCAACCTACTCTGATCAGCTTGGCTCTGGTTCTATTCTAGCCTAGAGCGCGTTGATCAATCGCCGATGCTCTGGCGGCCGGAGTTCTTGCGCCATGGCAACCGTTCTTGAGATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGGTGTTCGTCGACGGGTACACGCCCAAGAACGGCACGGCCGTGGTCAGGGAGTTCTCCGTGAACATCACCGGTAGGGCGCTGGTGATCGCGTTCACGCCGACGGGCAAGAAGGTGGCGTTCGTCAACGCCATCGAGGTGGTGTCCCATCCCGACGAGCTCATCGGCGACACCGCGCCGATGGTGAATCCGCGGAACCAGTCCCAGTACACCGGGTTGACGGCGAAGGCGCTGGAGACGGTGCACCGGATCAACATGGGAGAGCCCAAGGTCACGCCGAACAACGACACGCTGTGGAGGACATGGCTGCCGGACTGGACCTTCCTGCACGAGAGCAGCTTCGCGGCGCACAATCAAGTGTCTCCGGCGATGATCAAGTACCAAAGTGGCTACGCGACCTCGCTGACGGCGCCCTCCGCGGTGTACACCACCGTGACGGAGTTGAACACGACGGCGGCGATGGTCGGCAACACGCAGGCGCAGCTCAACCTGACGTGGAAGTTCAACGCACCGGCCGTCTCGGACTACCTCCTCCGGCTCCACTTGTGCGACATCGTCAGCAAGGCGACGCTCGGTGTGGTGTTCAATGTCTACGTCGGCCAGTGGCGGGTTCTCCAAGACTACGAGTCTTCCGGCGACACGTTCAGCCTTCTTGCCACGCCGCTCTATAAGGACTTCGTCCTTGCCGCCAGTGATGCGGCGAAGGGTACAATCACGGTGAGCATCGGGTCATCGACGGCAACCAACGCGTTGCCCGGCGGCTTCCTGAACGGCCTCGAGATCATGAGAATTGTCGGGAGCACCGGCTCCATCGACGGCGCCACGTCGCCGCGCGGCTCAAAGATCAAGACCGGGATCATCGCCGGATCGGCCGTGGGCGGGGCGGTGTTGGCGATTGCTATCGGGTGCGTCGCCGTCAGGATGCTGCGGAGGAAGAAGAAGCCGGTGAAGCAGCCGTCGAACACCTGGGTGCCGTTCTCGGCGAGCGCGCTGGGCGCCCGCTCTCGCACCAGCTTCGGCAGGAGCAGCATCGTCAACGTCGTCACGCTGGGGCAGAACGGCGCCGGCGCCGGCGCCGGGTACCGCTTCCCGTTCGCGGCGCTGCAGGAGGCGACGGGCGGGTTCGAGGAGGAGATGGTGATCGGCGTGGGCGGGTTCGGGAAGGTGTACAGGGGCACGCTCCGGGACGGCACGCAGGTGGCCGTGAAGCGCGGGAACCGGCTGTCGCAGCAGGGGCTCAACGAGTTCCGCACGGAGATCGAGCTGCTGTCCCAGCTGCGCCACCGCCACCTCGTCTCGCTCATCGGCTACTGCGACGAGCGCGGCGAGATGATCCTGGTGTACGAGTACATGGCGAAGGGCACGCTCCGGAGCCACCTGTACGGCTCCGACCTGCCGCCGCTGCCGTGGAAGCAGAGGCTGGAGGCGTGCATCGGGGCCGCGAGGGGGCTGCACTACCTGCACACCGGCTCGGCCAAGGCGATCATCCACCGGGACGTCAAGTCGGCCAACATCCTCCTCGACGACGGCTTCATGGCCAAGGTCGCCGACTTCGGGCTGTCCAAGACCGGGCCGGAGCTGGACAAGACGCACGTCAGCACCGCCGTCAAGGGCAGCTTCGGGTACCTCGACCCGGAGTACTTCCGGCGGCAGATGCTGACGGAGAAGTCCGACGTCTACTCCTTCGGCGTCGTCCTGCTCGAGGTGCTCTGCGCCCGCGCCGTCATCGACCCGACGCTGCCCCGGGAGATGGTGAACCTGGCGGAGTGGGCGACGCGGCGGCTCAGGGACGGCGAGCTCGACCGGATCGTGGACCAGAAAATTGCCGGGACGATACGGCCGGACTCGCTCAAGAAGTTCGCCGACACCGCCGAGAAGTGCCTCGCGGAGTACGGCGTGGAGCGGCCGAGCATGGGGGACGTGCTCTGGTGCCTCGAGTACGCGCTGCAGCTGCAGGTGGCGTCGCCGGACAGCTCTGTCACGACGCTTCAGCGCAGCTCGTCGATCTCAAGCGTCGTGACAGACGCCACCGTGAGTGCGAACCTGGGGGACCTCGACGGCATGTCCATGAAGAGAGTATTCTCAAAGATGCTCAAGAGCGAGGAAGAGGGCAGGTGAAGGATTGAAGCAAGAAATGTTCTAGTATACTAGCATCTGGTACACAATAGGATTGCGTATATCTCAATTTTGATCTTATATGCATGTAAATTTCAACAAATGATGTACATTTTTTTTTTTGCATGTAGGAGAAAGATGCACTAAACTGCATTATGGTACAGTGATAGGATACCACAGTTGGCAATGTAGGAGTATATCACGCCAGTAAACACAATGCAAATGCAAAGCAACACACCAGTAATAACGAGTATATATTCTCACGAATAAACGAACAAAATAGGCAGAATCTTGTCTGAACAACTTAGAATCCAGAGACTGCAGCAGGAAGTCACTCCCTCCATGTGTGACTCCGGCACATTCACAAATACTAGTACTAAACAAAATTTCATGAATGCAAGTGCAAGACGACCAAGATCATAGCAGCTGAGCAGGCAAACATGCTGTCTCTCCAGCACATTCACAAATAACAATCTTAGTTACAATGAATAAATGCGGTCTGTGTCGCTGCCTGATTATGAGTTC

More
CDS seq

ATGGCAACCGTTCTTGAGATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGGTGTTCGTCGACGGGTACACGCCCAAGAACGGCACGGCCGTGGTCAGGGAGTTCTCCGTGAACATCACCGGTAGGGCGCTGGTGATCGCGTTCACGCCGACGGGCAAGAAGGTGGCGTTCGTCAACGCCATCGAGGTGGTGTCCCATCCCGACGAGCTCATCGGCGACACCGCGCCGATGGTGAATCCGCGGAACCAGTCCCAGTACACCGGGTTGACGGCGAAGGCGCTGGAGACGGTGCACCGGATCAACATGGGAGAGCCCAAGGTCACGCCGAACAACGACACGCTGTGGAGGACATGGCTGCCGGACTGGACCTTCCTGCACGAGAGCAGCTTCGCGGCGCACAATCAAGTGTCTCCGGCGATGATCAAGTACCAAAGTGGCTACGCGACCTCGCTGACGGCGCCCTCCGCGGTGTACACCACCGTGACGGAGTTGAACACGACGGCGGCGATGGTCGGCAACACGCAGGCGCAGCTCAACCTGACGTGGAAGTTCAACGCACCGGCCGTCTCGGACTACCTCCTCCGGCTCCACTTGTGCGACATCGTCAGCAAGGCGACGCTCGGTGTGGTGTTCAATGTCTACGTCGGCCAGTGGCGGGTTCTCCAAGACTACGAGTCTTCCGGCGACACGTTCAGCCTTCTTGCCACGCCGCTCTATAAGGACTTCGTCCTTGCCGCCAGTGATGCGGCGAAGGGTACAATCACGGTGAGCATCGGGTCATCGACGGCAACCAACGCGTTGCCCGGCGGCTTCCTGAACGGCCTCGAGATCATGAGAATTGTCGGGAGCACCGGCTCCATCGACGGCGCCACGTCGCCGCGCGGCTCAAAGATCAAGACCGGGATCATCGCCGGATCGGCCGTGGGCGGGGCGGTGTTGGCGATTGCTATCGGGTGCGTCGCCGTCAGGATGCTGCGGAGGAAGAAGAAGCCGGTGAAGCAGCCGTCGAACACCTGGGTGCCGTTCTCGGCGAGCGCGCTGGGCGCCCGCTCTCGCACCAGCTTCGGCAGGAGCAGCATCGTCAACGTCGTCACGCTGGGGCAGAACGGCGCCGGCGCCGGCGCCGGGTACCGCTTCCCGTTCGCGGCGCTGCAGGAGGCGACGGGCGGGTTCGAGGAGGAGATGGTGATCGGCGTGGGCGGGTTCGGGAAGGTGTACAGGGGCACGCTCCGGGACGGCACGCAGGTGGCCGTGAAGCGCGGGAACCGGCTGTCGCAGCAGGGGCTCAACGAGTTCCGCACGGAGATCGAGCTGCTGTCCCAGCTGCGCCACCGCCACCTCGTCTCGCTCATCGGCTACTGCGACGAGCGCGGCGAGATGATCCTGGTGTACGAGTACATGGCGAAGGGCACGCTCCGGAGCCACCTGTACGGCTCCGACCTGCCGCCGCTGCCGTGGAAGCAGAGGCTGGAGGCGTGCATCGGGGCCGCGAGGGGGCTGCACTACCTGCACACCGGCTCGGCCAAGGCGATCATCCACCGGGACGTCAAGTCGGCCAACATCCTCCTCGACGACGGCTTCATGGCCAAGGTCGCCGACTTCGGGCTGTCCAAGACCGGGCCGGAGCTGGACAAGACGCACGTCAGCACCGCCGTCAAGGGCAGCTTCGGGTACCTCGACCCGGAGTACTTCCGGCGGCAGATGCTGACGGAGAAGTCCGACGTCTACTCCTTCGGCGTCGTCCTGCTCGAGGTGCTCTGCGCCCGCGCCGTCATCGACCCGACGCTGCCCCGGGAGATGGTGAACCTGGCGGAGTGGGCGACGCGGCGGCTCAGGGACGGCGAGCTCGACCGGATCGTGGACCAGAAAATTGCCGGGACGATACGGCCGGACTCGCTCAAGAAGTTCGCCGACACCGCCGAGAAGTGCCTCGCGGAGTACGGCGTGGAGCGGCCGAGCATGGGGGACGTGCTCTGGTGCCTCGAGTACGCGCTGCAGCTGCAGGTGGCGTCGCCGGACAGCTCTGTCACGACGCTTCAGCGCAGCTCGTCGATCTCAAGCGTCGTGACAGACGCCACCGTGAGTGCGAACCTGGGGGACCTCGACGGCATGTCCATGAAGAGAGTATTCTCAAAGATGCTCAAGAGCGAGGAAGAGGGCAGGAGAAAGATGCACTAA

More
Protein seq

MATVLEMLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVIAFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFNAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIAIGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGRRKMH

Function Receptor-like protein kinase HERK 1 [UniProtKB/Swiss-Prot:Q9LX66]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_03g0013040 OsARC_03g0013040.01 Chr03 9961534 9964942 + NAM
CDS seq

ATGGCAACCGTTCTTGAGATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGGTGTTCGTCGACGGGTACACGCCCAAGAACGGCACGGCCGTGGTCAGGGAGTTCTCCGTGAACATCACCGGTAGGGCGCTGGTGATCGCGTTCACGCCGACGGGCAAGAAGGTGGCGTTCGTCAACGCCATCGAGGTGGTGTCCCATCCCGACGAGCTCATCGGCGACACCGCGCCGATGGTGAATCCGCGGAACCAGTCCCAGTACACCGGGTTGACGGCGAAGGCGCTGGAGACGGTGCACCGGATCAACATGGGAGAGCCCAAGGTCACGCCGAACAACGACACGCTGTGGAGGACATGGCTGCCGGACTGGACCTTCCTGCACGAGAGCAGCTTCGCGGCGCACAATCAAGTGTCTCCGGCGATGATCAAGTACCAAAGTGGCTACGCGACCTCGCTGACGGCGCCCTCCGCGGTGTACACCACCGTGACGGAGTTGAACACGACGGCGGCGATGGTCGGCAACACGCAGGCGCAGCTCAACCTGACGTGGAAGTTCAACGCACCGGCCGTCTCGGACTACCTCCTCCGGCTCCACTTGTGCGACATCGTCAGCAAGGCGACGCTCGGTGTGGTGTTCAATGTCTACGTCGGCCAGTGGCGGGTTCTCCAAGACTACGAGTCTTCCGGCGACACGTTCAGCCTTCTTGCCACGCCGCTCTATAAGGACTTCGTCCTTGCCGCCAGTGATGCGGCGAAGGGTACAATCACGGTGAGCATCGGGTCATCGACGGCAACCAACGCGTTGCCCGGCGGCTTCCTGAACGGCCTCGAGATCATGAGAATTGTCGGGAGCACCGGCTCCATCGACGGCGCCACGTCGCCGCGCGGCTCAAAGATCAAGACCGGGATCATCGCCGGATCGGCCGTGGGCGGGGCGGTGTTGGCGATTGCTATCGGGTGCGTCGCCGTCAGGATGCTGCGGAGGAAGAAGAAGCCGGTGAAGCAGCCGTCGAACACCTGGGTGCCGTTCTCGGCGAGCGCGCTGGGCGCCCGCTCTCGCACCAGCTTCGGCAGGAGCAGCATCGTCAACGTCGTCACGCTGGGGCAGAACGGCGCCGGCGCCGGCGCCGGGTACCGCTTCCCGTTCGCGGCGCTGCAGGAGGCGACGGGCGGGTTCGAGGAGGAGATGGTGATCGGCGTGGGCGGGTTCGGGAAGGTGTACAGGGGCACGCTCCGGGACGGCACGCAGGTGGCCGTGAAGCGCGGGAACCGGCTGTCGCAGCAGGGGCTCAACGAGTTCCGCACGGAGATCGAGCTGCTGTCCCAGCTGCGCCACCGCCACCTCGTCTCGCTCATCGGCTACTGCGACGAGCGCGGCGAGATGATCCTGGTGTACGAGTACATGGCGAAGGGCACGCTCCGGAGCCACCTGTACGGCTCCGACCTGCCGCCGCTGCCGTGGAAGCAGAGGCTGGAGGCGTGCATCGGGGCCGCGAGGGGGCTGCACTACCTGCACACCGGCTCGGCCAAGGCGATCATCCACCGGGACGTCAAGTCGGCCAACATCCTCCTCGACGACGGCTTCATGGCCAAGGTCGCCGACTTCGGGCTGTCCAAGACCGGGCCGGAGCTGGACAAGACGCACGTCAGCACCGCCGTCAAGGGCAGCTTCGGGTACCTCGACCCGGAGTACTTCCGGCGGCAGATGCTGACGGAGAAGTCCGACGTCTACTCCTTCGGCGTCGTCCTGCTCGAGGTGCTCTGCGCCCGCGCCGTCATCGACCCGACGCTGCCCCGGGAGATGGTGAACCTGGCGGAGTGGGCGACGCGGCGGCTCAGGGACGGCGAGCTCGACCGGATCGTGGACCAGAAAATTGCCGGGACGATACGGCCGGACTCGCTCAAGAAGTTCGCCGACACCGCCGAGAAGTGCCTCGCGGAGTACGGCGTGGAGCGGCCGAGCATGGGGGACGTGCTCTGGTGCCTCGAGTACGCGCTGCAGCTGCAGGTGGCGTCGCCGGACAGCTCTGTCACGACGCTTCAGCGCAGCTCGTCGATCTCAAGCGTCGTGACAGACGCCACCGTGAGTGCGAACCTGGGGGACCTCGACGGCATGTCCATGAAGAGAGTATTCTCAAAGATGCTCAAGAGCGAGGAAGAGGGCAGGTGA

More
Protein seq

MATVLEMLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVIAFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFNAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIAIGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGR

More
Gene Transcript Chromosome Start End Strand Source
OsARC_03g0013040 OsARC_03g0013040.02 Chr03 9961534 9964846 + NAM
CDS seq

ATGGCAACCGTTCTTGAGATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGGTGTTCGTCGACGGGTACACGCCCAAGAACGGCACGGCCGTGGTCAGGGAGTTCTCCGTGAACATCACCGGTAGGGCGCTGGTGATCGCGTTCACGCCGACGGGCAAGAAGGTGGCGTTCGTCAACGCCATCGAGGTGGTGTCCCATCCCGACGAGCTCATCGGCGACACCGCGCCGATGGTGAATCCGCGGAACCAGTCCCAGTACACCGGGTTGACGGCGAAGGCGCTGGAGACGGTGCACCGGATCAACATGGGAGAGCCCAAGGTCACGCCGAACAACGACACGCTGTGGAGGACATGGCTGCCGGACTGGACCTTCCTGCACGAGAGCAGCTTCGCGGCGCACAATCAAGTGTCTCCGGCGATGATCAAGTACCAAAGTGGCTACGCGACCTCGCTGACGGCGCCCTCCGCGGTGTACACCACCGTGACGGAGTTGAACACGACGGCGGCGATGGTCGGCAACACGCAGGCGCAGCTCAACCTGACGTGGAAGTTCAACGCACCGGCCGTCTCGGACTACCTCCTCCGGCTCCACTTGTGCGACATCGTCAGCAAGGCGACGCTCGGTGTGGTGTTCAATGTCTACGTCGGCCAGTGGCGGGTTCTCCAAGACTACGAGTCTTCCGGCGACACGTTCAGCCTTCTTGCCACGCCGCTCTATAAGGACTTCGTCCTTGCCGCCAGTGATGCGGCGAAGGGTACAATCACGGTGAGCATCGGGTCATCGACGGCAACCAACGCGTTGCCCGGCGGCTTCCTGAACGGCCTCGAGATCATGAGAATTGTCGGGAGCACCGGCTCCATCGACGGCGCCACGTCGCCGCGCGGCTCAAAGATCAAGACCGGGATCATCGCCGGATCGGCCGTGGGCGGGGCGGTGTTGGCGATTGCTATCGGGTGCGTCGCCGTCAGGATGCTGCGGAGGAAGAAGAAGCCGGTGAAGCAGCCGTCGAACACCTGGGTGCCGTTCTCGGCGAGCGCGCTGGGCGCCCGCTCTCGCACCAGCTTCGGCAGGAGCAGCATCGTCAACGTCGTCACGCTGGGGCAGAACGGCGCCGGCGCCGGCGCCGGGTACCGCTTCCCGTTCGCGGCGCTGCAGGAGGCGACGGGCGGGTTCGAGGAGGAGATGGTGATCGGCGTGGGCGGGTTCGGGAAGGTGTACAGGGGCACGCTCCGGGACGGCACGCAGGTGGCCGTGAAGCGCGGGAACCGGCTGTCGCAGCAGGGGCTCAACGAGTTCCGCACGGAGATCGAGCTGCTGTCCCAGCTGCGCCACCGCCACCTCGTCTCGCTCATCGGCTACTGCGACGAGCGCGGCGAGATGATCCTGGTGTACGAGTACATGGCGAAGGGCACGCTCCGGAGCCACCTGTACGGCTCCGACCTGCCGCCGCTGCCGTGGAAGCAGAGGCTGGAGGCGTGCATCGGGGCCGCGAGGGGGCTGCACTACCTGCACACCGGCTCGGCCAAGGCGATCATCCACCGGGACGTCAAGTCGGCCAACATCCTCCTCGACGACGGCTTCATGGCCAAGGTCGCCGACTTCGGGCTGTCCAAGACCGGGCCGGAGCTGGACAAGACGCACGTCAGCACCGCCGTCAAGGGCAGCTTCGGGTACCTCGACCCGGAGTACTTCCGGCGGCAGATGCTGACGGAGAAGTCCGACGTCTACTCCTTCGGCGTCGTCCTGCTCGAGGTGCTCTGCGCCCGCGCCGTCATCGACCCGACGCTGCCCCGGGAGATGGTGAACCTGGCGGAGTGGGCGACGCGGCGGCTCAGGGACGGCGAGCTCGACCGGATCGTGGACCAGAAAATTGCCGGGACGATACGGCCGGACTCGCTCAAGAAGTTCGCCGACACCGCCGAGAAGTGCCTCGCGGAGTACGGCGTGGAGCGGCCGAGCATGGGGGACGTGCTCTGGTGCCTCGAGTACGCGCTGCAGCTGCAGGTGGCGTCGCCGGACAGCTCTGTCACGACGCTTCAGCGCAGCTCGTCGATCTCAAGCGTCGTGACAGACGCCACCGTGAGTGCGAACCTGGGGGACCTCGACGGCATGTCCATGAAGAGAGTATTCTCAAAGATGCTCAAGAGCGAGGAAGAGGGCAGGTGA

More
Protein seq

MATVLEMLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVIAFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFNAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIAIGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGR

More
Gene Transcript Chromosome Start End Strand Source
OsARC_03g0013040 OsARC_03g0013040.03 Chr03 9961534 9964846 + NAM
CDS seq

ATGGCAACCGTTCTTGAGATGCTCGTGCAGCTCGCCGTCGTTGTCACGGTGCTATGCGCCGCCGTGCGAGCGTACACCCCGGCGGACAGCTACCTCTTCCTCTGCGGCACGTCCGGGAACGCCACCGTCGATGGCCGGACGTTCGTCGGGGACGCTGGTCTGCCGGCCTCGGTGCTGATGGCGCCCCAGAGCACCGAGGCCAACATGCCGGCGAACCAGGTCACTGGCGCCGGCGACGACTCGCCGGCGCTGTACCAGTCAGCGCGCGTGTTCACGGCGCCGGCCAACTACGCGTTCTCCGCTAAGCCTGGCCGCCACTTCGTCCGCCTCCGCTTCTTCCCCTTCCGGTACCAGTCTTACGACCTCGCCGCGGACGCGGCGTTCAATGTGTCCGTGCAGGGCGTGGTGTTCGTCGACGGGTACACGCCCAAGAACGGCACGGCCGTGGTCAGGGAGTTCTCCGTGAACATCACCGGTAGGGCGCTGGTGATCGCGTTCACGCCGACGGGCAAGAAGGTGGCGTTCGTCAACGCCATCGAGGTGGTGTCCCATCCCGACGAGCTCATCGGCGACACCGCGCCGATGGTGAATCCGCGGAACCAGTCCCAGTACACCGGGTTGACGGCGAAGGCGCTGGAGACGGTGCACCGGATCAACATGGGAGAGCCCAAGGTCACGCCGAACAACGACACGCTGTGGAGGACATGGCTGCCGGACTGGACCTTCCTGCACGAGAGCAGCTTCGCGGCGCACAATCAAGTGTCTCCGGCGATGATCAAGTACCAAAGTGGCTACGCGACCTCGCTGACGGCGCCCTCCGCGGTGTACACCACCGTGACGGAGTTGAACACGACGGCGGCGATGGTCGGCAACACGCAGGCGCAGCTCAACCTGACGTGGAAGTTCAACGCACCGGCCGTCTCGGACTACCTCCTCCGGCTCCACTTGTGCGACATCGTCAGCAAGGCGACGCTCGGTGTGGTGTTCAATGTCTACGTCGGCCAGTGGCGGGTTCTCCAAGACTACGAGTCTTCCGGCGACACGTTCAGCCTTCTTGCCACGCCGCTCTATAAGGACTTCGTCCTTGCCGCCAGTGATGCGGCGAAGGGTACAATCACGGTGAGCATCGGGTCATCGACGGCAACCAACGCGTTGCCCGGCGGCTTCCTGAACGGCCTCGAGATCATGAGAATTGTCGGGAGCACCGGCTCCATCGACGGCGCCACGTCGCCGCGCGGCTCAAAGATCAAGACCGGGATCATCGCCGGATCGGCCGTGGGCGGGGCGGTGTTGGCGATTGCTATCGGGTGCGTCGCCGTCAGGATGCTGCGGAGGAAGAAGAAGCCGGTGAAGCAGCCGTCGAACACCTGGGTGCCGTTCTCGGCGAGCGCGCTGGGCGCCCGCTCTCGCACCAGCTTCGGCAGGAGCAGCATCGTCAACGTCGTCACGCTGGGGCAGAACGGCGCCGGCGCCGGCGCCGGGTACCGCTTCCCGTTCGCGGCGCTGCAGGAGGCGACGGGCGGGTTCGAGGAGGAGATGGTGATCGGCGTGGGCGGGTTCGGGAAGGTGTACAGGGGCACGCTCCGGGACGGCACGCAGGTGGCCGTGAAGCGCGGGAACCGGCTGTCGCAGCAGGGGCTCAACGAGTTCCGCACGGAGATCGAGCTGCTGTCCCAGCTGCGCCACCGCCACCTCGTCTCGCTCATCGGCTACTGCGACGAGCGCGGCGAGATGATCCTGGTGTACGAGTACATGGCGAAGGGCACGCTCCGGAGCCACCTGTACGGCTCCGACCTGCCGCCGCTGCCGTGGAAGCAGAGGCTGGAGGCGTGCATCGGGGCCGCGAGGGGGCTGCACTACCTGCACACCGGCTCGGCCAAGGCGATCATCCACCGGGACGTCAAGTCGGCCAACATCCTCCTCGACGACGGCTTCATGGCCAAGGTCGCCGACTTCGGGCTGTCCAAGACCGGGCCGGAGCTGGACAAGACGCACGTCAGCACCGCCGTCAAGGGCAGCTTCGGGTACCTCGACCCGGAGTACTTCCGGCGGCAGATGCTGACGGAGAAGTCCGACGTCTACTCCTTCGGCGTCGTCCTGCTCGAGGTGCTCTGCGCCCGCGCCGTCATCGACCCGACGCTGCCCCGGGAGATGGTGAACCTGGCGGAGTGGGCGACGCGGCGGCTCAGGGACGGCGAGCTCGACCGGATCGTGGACCAGAAAATTGCCGGGACGATACGGCCGGACTCGCTCAAGAAGTTCGCCGACACCGCCGAGAAGTGCCTCGCGGAGTACGGCGTGGAGCGGCCGAGCATGGGGGACGTGCTCTGGTGCCTCGAGTACGCGCTGCAGCTGCAGGTGGCGTCGCCGGACAGCTCTGTCACGACGCTTCAGCGCAGCTCGTCGATCTCAAGCGTCGTGACAGACGCCACCGTGAGTGCGAACCTGGGGGACCTCGACGGCATGTCCATGAAGAGAGTATTCTCAAAGATGCTCAAGAGCGAGGAAGAGGGCAGGAGAAAGATGCACTAA

More
Protein seq

MATVLEMLVQLAVVVTVLCAAVRAYTPADSYLFLCGTSGNATVDGRTFVGDAGLPASVLMAPQSTEANMPANQVTGAGDDSPALYQSARVFTAPANYAFSAKPGRHFVRLRFFPFRYQSYDLAADAAFNVSVQGVVFVDGYTPKNGTAVVREFSVNITGRALVIAFTPTGKKVAFVNAIEVVSHPDELIGDTAPMVNPRNQSQYTGLTAKALETVHRINMGEPKVTPNNDTLWRTWLPDWTFLHESSFAAHNQVSPAMIKYQSGYATSLTAPSAVYTTVTELNTTAAMVGNTQAQLNLTWKFNAPAVSDYLLRLHLCDIVSKATLGVVFNVYVGQWRVLQDYESSGDTFSLLATPLYKDFVLAASDAAKGTITVSIGSSTATNALPGGFLNGLEIMRIVGSTGSIDGATSPRGSKIKTGIIAGSAVGGAVLAIAIGCVAVRMLRRKKKPVKQPSNTWVPFSASALGARSRTSFGRSSIVNVVTLGQNGAGAGAGYRFPFAALQEATGGFEEEMVIGVGGFGKVYRGTLRDGTQVAVKRGNRLSQQGLNEFRTEIELLSQLRHRHLVSLIGYCDERGEMILVYEYMAKGTLRSHLYGSDLPPLPWKQRLEACIGAARGLHYLHTGSAKAIIHRDVKSANILLDDGFMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYFRRQMLTEKSDVYSFGVVLLEVLCARAVIDPTLPREMVNLAEWATRRLRDGELDRIVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSSVTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSEEEGRRKMH

More
OsARC_03g0013040.03OsARC_03g0013040.02OsARC_03g0013040.01AS9961434 bp9962000 bp9963000 bp9964000 bp9965000 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
RI Chr03 9961534 9964846 + OsARC_03g0013040.02 OsARC_03g0013040.02,OsARC_03g0013040.03 All
A5 Chr03 9964416 9964549 + OsARC_03g0013040.01 OsARC_03g0013040.01,OsARC_03g0013040.03 All

Expression

Leaf Root Panicle
FPKM 0.158874 0.000000 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0281500 RBH 1.209835 2.074864 2.506224
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g17300 RBH 0.250737 0.000000 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os03g0281500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0013240 RBH 0.314434 0.000000 1.623985
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0013050 RBH 0.533063 2.308719 0.926998
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0013070 RBH 1.866023 6.047142 1.874717
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0003470 SBH 0.035706 0.015925 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0012900 RBH 3.384600 3.888426 6.890939
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0164300 RBH 0.0156105 0.1929415 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0012810 RBH 0.501178 0.217931 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0165600 RBH 0.1102555 0.0150935 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0012970 RBH 0.080797 0.079005 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0012990 RBH 0.000000 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0013050 RBH 10.574743 1.909349 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0012920 RBH 0.000000 0.143920 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0012880 RBH 0.070889 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G012840 RBH 0.243222 0.101027 0.500830
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0012690 RBH 1.407892 6.715055 1.975407
Powered by

© 2021-2025 Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.