Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_02g0008540 OGI:02001240 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr02:6146754-6150403
Gene Symbol RLCK65, OsRLCK65
DNA seq

tcaaactatttttcctccactggaaagatcaacaaatgcttgcttgatggagtttatttcagtggaaacctgcgccatccctaacctgtccttcggtgatgctatggagcacatgagcgccaccttaaccagtgggaggacacaactttgcatcagttcggagtttccaccatccaaatcattgtgtagcatattggggtctaaaacctcggttacccggtggggaaatgcagcatccacgcgatcgtggaggctcaaaccatcattgaatttttcatcagttggacgctttccagttaatatctctaacaacagtactccatagctgtagacatcacccttcgttgatatttgcccacccattccgtactctgcattttcatttgaaaacataacaaaggtgaatggcggaaaactacaatccatgtaacattggataagttaattggatggctgaagcatacaagtcaataaatcagtataagtttccaatttctctcacctggtgcaatatatcctatggatccttttaagtcagccaaacttgtagagttactaggctctgctgttgaattagcacacataaatcttgccaacccaaagtcactgacatatgcagtcatttcaagatccaaaagaacattgcttggtttgatgtcacaatgtattagtggggatacacactggttgtgaagataatctaaagcgtatgcaatgtccaaggctaagctaatcctttcacccaaagttaggaatctctgcttaccaaggccatggtcctctggatgtagccacatttctagacttccatttggcatatactgaaagacaagtgctttaaaatcatagccatttggatcaaccgtagagcataaagtaatgattttgacaagatttcgatggcgaatatatcttaatgcctcgcactccgcattgaagcttgtgggtgctccgtacttgttgagattgaaaatcttaatagcaactgggttgtcctcaaatgccagaaggcccttgtaaacagccccaaaggatcccaaaccaaccaaatttgtggcagagaacccatctgtcgctttggcaatatcttcatatgatattttcctcaagttcacactggagtgctgcaaatttggttcttcttttcttctcttcatgagaacaaccgttaaacataacaatgaaattacaacagcagacactacgattggaattactattttcaaaacagtagacttgcttttactttgtgatcctgattcagggcaaaagggcaggccataccctggagcattcgcacacaacctgtagttcccacccaagataaccctgctagcattaccaaagacaccatttgatggtattgccccttcaaaatcattgaatgaaaggttgagtttctgcaaagaacttaagagagtgaggaactctggaacttttcctgacaagctgttacgagagagatccagctccttgatgctttttaagttcatgaaagattgtggaatgcttccagtaagaaggttcccttccatgtgaaggtattccaaaagcacgcatttccctagggtggacggtatttcgccgttcaagcgattgtttgaaatactgatacttccaagatttatgaggttgccaatttctagtggtatgggcccagtaaacaaattatgtgacaaatctaaactttttgatagggaagaaatgttgaagacctcacttggaaggcttccaccgaagaaattgtgagagagatcaagcttttctaattgtctccactgccctatgtttgcaggtatactcccattcaagttgttcccatctatataaaactcggttagttggggaaggctgccaatagaatctggaatatggccagagaggttattttgtgcaaagcttagaaccagtaagttgctaagatttccaatggtaggtgggatgctcccactaaacatattgttatccatatacataacagtgagactctttaggttaccaatctctgatggaattgtcccagaaagtttgttttgcttgagaaacaaccagttgagctgtgagggaagattaccgactgagctaggcaagcttcctcggagaatattgccatccaaggccaactttttcagttgagtgcagtttgcaagggatgagaggaagctccagtcccctgcttcaagctggttgtatgcaagatcaaggtcctgcaagtttggcaaggacccaaaagatggcactacaccggtgagcccagtagcagtaagataaatcatttctagtttggacatattggcaagagaagctgggatcggcccatttaactgtgttgttgataggatcaaggtttcaaggtttggaagcctgttgcctatatctggtggtagtcggccgatgagtgagttattggccattccaagatatttcaaagatgtcatgttgaaaatattctgtggcacattaccggacaacttgttatatgtaagaactagcctctctagggtttggattttacttaggctctcaggaatgctccccaccaagttatttgctcctagagataaaagaaccaaggaggaaaggtttcccagtgaagctggtatccctcctgttagtttattctgtgctagactaaggtattgaatcggtgcagcaactgctgtaataggtggtatggaaccaactaagctgttacggttgaggtaaatggttgtcaatgtggagctgttgaagagggatggtgggatctcccctgtaagaccattttgcatgagcctaatgacttgcagggatgagctatttgccaagaactccgggattcctcctgtgagctgattgaccccgagatcaacatatataaaagacgggctactgcccaacaatggtggtatgtcacctgtgagggcgttgttggagagatccaatgttttcagctcacgaagcgttccgaatccggtaggaatttcgccttcaagcttgttgttgtaaagcataacttgctggaggtgagtgcattgggttaagcttggtggtatctcaccttggagggagttgttccataagccgagtacctggagattgctgcatgaggacagctcatctggaatacggcctacaagagagttgatgctcaggttcaggtagctgatttgtcccaagcgcccgagctcacttggaatttttccaaggaacgcgttgcttgataagtcgaggcttgcgatggagctcagattgccgatgcaaggtggtattgaaccaccgaggcctttggagctgacgttgagtgccatgactcggagttgggtctgtgtgttgttgcatgaaacaccctgccaattgcagaagttctgggatgtattggtccatgagcttaaggctccattaggatcagagatttgagacttgaagcagagcagggcttctctatcagtatcagtatcatcactgatcgctaatggcagggagcatgagatgatgaagatagccaagagtggaatgagttttgggcagggagcaaacaagcggatcatcttgctgttggtgctgagggcagtgaggcttgctattttgcttatggctaatatgtaggaggaggcacgcacttgccttatatttctgtactccaaggaaatcggcctactgcttctagc

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CDS seq

atgatccgcttgtttgctccctgcccaaaactcattccactcttggctatcttcatcatctcatgctccctgccattagcgatcagtgatgatactgatactgatagagaagccctgctctgcttcaagtctcaaatctctgatcctaatggagccttaagctcatggaccaatacatcccagaacttctgcaattggcagggtgtttcatgcaacaacacacagacccaactccgagtcatggcactcaacgtcagctccaaaggcctcggtggttcaataccaccttgcatcggcaatctgagctccatcgcaagcctcgacttatcaagcaacgcgttccttggaaaaattccaagtgagctcgggcgcttgggacaaatcagctacctgaacctgagcatcaactctcttgtaggccgtattccagatgagctgtcctcatgcagcaatctccaggtactcggcttatggaacaactccctccaaggtgagataccaccaagcttaacccaatgcactcacctccagcaagttatgctttacaacaacaagcttgaaggcgaaattcctaccggattcggaacgcttcgtgagctgaaaacattggatctctccaacaacgccctcacaggtgacataccaccattgttgggcagtagcccgtcttttatatatgttgatctcggggtcaatcagctcacaggaggaatcccggagttcttggcaaatagctcatccctgcaagtcattaggctcatgcaaaatggtcttacaggggagatcccaccatccctcttcaacagctccacattgacaaccatttacctcaaccgtaacagcttagttggttccataccacctattacagcagttgctgcaccgattcaataccttagtctagcacagaataaactaacaggagggataccagcttcactgggaaacctttcctccttggttcttttatctctaggagcaaataacttggtggggagcattcctgagagcctaagtaaaatccaaaccctagagaggctagttcttacatataacaagttgtccggtaatgtgccacagaatattttcaacatgacatctttgaaatatcttggaatggccaataactcactcatcggccgactaccaccagatataggcaacaggcttccaaaccttgaaaccttgatcctatcaacaacacagttaaatgggccgatcccagcttctcttgccaatatgtccaaactagaaatgatttatcttactgctactgggctcaccggtgtagtgccatcttttgggtccttgccaaacttgcaggaccttgatcttgcatacaaccagcttgaagcaggggactggagcttcctctcatcccttgcaaactgcactcaactgaaaaagttggccttggatggcaatattctccgaggaagcttgcctagctcagtcggtaatcttccctcacagctcaactggttgtttctcaagcaaaacaaactttctgggacaattccatcagagattggtaacctaaagagtctcactgttatgtatatggataacaatatgtttagtgggagcatcccacctaccattggaaatcttagcaacttactggttctaagctttgcacaaaataacctctctggccatattccagattctattggcagccttccccaactaaccgagttttatatagatgggaacaacttgaatgggagtatacctgcaaacatagggcagtggagacaattagaaaagcttgatctctctcacaatttcttcggtggaagccttccaagtgaggtcttcaacatttcttccctatcaaaaagtttagatttgtcacataatttgtttactgggcccataccactagaaattggcaacctcataaatcttggaagtatcagtatttcaaacaatcgcttgaacggcgaaataccgtccaccctagggaaatgcgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagctggatctctctcgtaacagcttgtcaggaaaagttccagagttcctcactctcttaagttctttgcagaaactcaacctttcattcaatgattttgaaggggcaataccatcaaatggtgtctttggtaatgctagcagggttatcttgggtgggaactacaggttgtgtgcgaatgctccagggtatggcctgcccttttgccctgaatcaggatcacaaagtaaaagcaagtctactgttttgaaaatagtaattccaatcgtagtgtctgctgttgtaatttcattgttatgtttaacggttgttctcatgaagagaagaaaagaagaaccaaatttgcagcactccagtgtgaacttgaggaaaatatcatatgaagatattgccaaagcgacagatgggttctctgccacaaatttggttggtttgggatcctttggggctgtttacaagggccttctggcatttgaggacaacccagttgctattaagattttcaatctcaacaagtacggagcacccacaagcttcaatgcggagtgcgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattactttatgctctacggttgatccaaatggctatgattttaaagcacttgtctttcagtatatgccaaatggaagtctagaaatgtggctacatccagaggaccatggccttggtaagcagagattcctaactttgggtgaaaggattagcttagccttggacattgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatcaaaccaagcaatgttcttttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgtgtgctaattcaacagcagagcctagtaactctacaagtttggctgacttaaaaggatccataggatatattgcaccagagtacggaatgggtgggcaaatatcaacgaagggtgatgtctacagctatggagtactgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatggtttgagcctccacgatcgcgtggatgctgcatttccccaccgggtaaccgaggttttagaccccaatatgctacacaatgatttggatggtggaaactccgaactgatgcaaagttgtgtcctcccactggttaaggtggcgctcatgtgctccatagcatcaccgaaggacaggttagggatggcgcaggtttccactgaaataaactccatcaagcaagcatttgttgatctttccagtggaggaaaaatagtttga

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Protein seq

MIRLFAPCPKLIPLLAIFIISCSLPLAISDDTDTDREALLCFKSQISDPNGALSSWTNTSQNFCNWQGVSCNNTQTQLRVMALNVSSKGLGGSIPPCIGNLSSIASLDLSSNAFLGKIPSELGRLGQISYLNLSINSLVGRIPDELSSCSNLQVLGLWNNSLQGEIPPSLTQCTHLQQVMLYNNKLEGEIPTGFGTLRELKTLDLSNNALTGDIPPLLGSSPSFIYVDLGVNQLTGGIPEFLANSSSLQVIRLMQNGLTGEIPPSLFNSSTLTTIYLNRNSLVGSIPPITAVAAPIQYLSLAQNKLTGGIPASLGNLSSLVLLSLGANNLVGSIPESLSKIQTLERLVLTYNKLSGNVPQNIFNMTSLKYLGMANNSLIGRLPPDIGNRLPNLETLILSTTQLNGPIPASLANMSKLEMIYLTATGLTGVVPSFGSLPNLQDLDLAYNQLEAGDWSFLSSLANCTQLKKLALDGNILRGSLPSSVGNLPSQLNWLFLKQNKLSGTIPSEIGNLKSLTVMYMDNNMFSGSIPPTIGNLSNLLVLSFAQNNLSGHIPDSIGSLPQLTEFYIDGNNLNGSIPANIGQWRQLEKLDLSHNFFGGSLPSEVFNISSLSKSLDLSHNLFTGPIPLEIGNLINLGSISISNNRLNGEIPSTLGKCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPEFLTLLSSLQKLNLSFNDFEGAIPSNGVFGNASRVILGGNYRLCANAPGYGLPFCPESGSQSKSKSTVLKIVIPIVVSAVVISLLCLTVVLMKRRKEEPNLQHSSVNLRKISYEDIAKATDGFSATNLVGLGSFGAVYKGLLAFEDNPVAIKIFNLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTVDPNGYDFKALVFQYMPNGSLEMWLHPEDHGLGKQRFLTLGERISLALDIAYALDYLHNQCVSPLIHCDIKPSNVLLDLEMTAYVSDFGLARFMCANSTAEPSNSTSLADLKGSIGYIAPEYGMGGQISTKGDVYSYGVLLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEVLDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSIASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_02g0008540 OsNaBo_02g0008540.01 Chr02 6146754 6150403 - NAM
CDS seq

atgatccgcttgtttgctccctgcccaaaactcattccactcttggctatcttcatcatctcatgctccctgccattagcgatcagtgatgatactgatactgatagagaagccctgctctgcttcaagtctcaaatctctgatcctaatggagccttaagctcatggaccaatacatcccagaacttctgcaattggcagggtgtttcatgcaacaacacacagacccaactccgagtcatggcactcaacgtcagctccaaaggcctcggtggttcaataccaccttgcatcggcaatctgagctccatcgcaagcctcgacttatcaagcaacgcgttccttggaaaaattccaagtgagctcgggcgcttgggacaaatcagctacctgaacctgagcatcaactctcttgtaggccgtattccagatgagctgtcctcatgcagcaatctccaggtactcggcttatggaacaactccctccaaggtgagataccaccaagcttaacccaatgcactcacctccagcaagttatgctttacaacaacaagcttgaaggcgaaattcctaccggattcggaacgcttcgtgagctgaaaacattggatctctccaacaacgccctcacaggtgacataccaccattgttgggcagtagcccgtcttttatatatgttgatctcggggtcaatcagctcacaggaggaatcccggagttcttggcaaatagctcatccctgcaagtcattaggctcatgcaaaatggtcttacaggggagatcccaccatccctcttcaacagctccacattgacaaccatttacctcaaccgtaacagcttagttggttccataccacctattacagcagttgctgcaccgattcaataccttagtctagcacagaataaactaacaggagggataccagcttcactgggaaacctttcctccttggttcttttatctctaggagcaaataacttggtggggagcattcctgagagcctaagtaaaatccaaaccctagagaggctagttcttacatataacaagttgtccggtaatgtgccacagaatattttcaacatgacatctttgaaatatcttggaatggccaataactcactcatcggccgactaccaccagatataggcaacaggcttccaaaccttgaaaccttgatcctatcaacaacacagttaaatgggccgatcccagcttctcttgccaatatgtccaaactagaaatgatttatcttactgctactgggctcaccggtgtagtgccatcttttgggtccttgccaaacttgcaggaccttgatcttgcatacaaccagcttgaagcaggggactggagcttcctctcatcccttgcaaactgcactcaactgaaaaagttggccttggatggcaatattctccgaggaagcttgcctagctcagtcggtaatcttccctcacagctcaactggttgtttctcaagcaaaacaaactttctgggacaattccatcagagattggtaacctaaagagtctcactgttatgtatatggataacaatatgtttagtgggagcatcccacctaccattggaaatcttagcaacttactggttctaagctttgcacaaaataacctctctggccatattccagattctattggcagccttccccaactaaccgagttttatatagatgggaacaacttgaatgggagtatacctgcaaacatagggcagtggagacaattagaaaagcttgatctctctcacaatttcttcggtggaagccttccaagtgaggtcttcaacatttcttccctatcaaaaagtttagatttgtcacataatttgtttactgggcccataccactagaaattggcaacctcataaatcttggaagtatcagtatttcaaacaatcgcttgaacggcgaaataccgtccaccctagggaaatgcgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagctggatctctctcgtaacagcttgtcaggaaaagttccagagttcctcactctcttaagttctttgcagaaactcaacctttcattcaatgattttgaaggggcaataccatcaaatggtgtctttggtaatgctagcagggttatcttgggtgggaactacaggttgtgtgcgaatgctccagggtatggcctgcccttttgccctgaatcaggatcacaaagtaaaagcaagtctactgttttgaaaatagtaattccaatcgtagtgtctgctgttgtaatttcattgttatgtttaacggttgttctcatgaagagaagaaaagaagaaccaaatttgcagcactccagtgtgaacttgaggaaaatatcatatgaagatattgccaaagcgacagatgggttctctgccacaaatttggttggtttgggatcctttggggctgtttacaagggccttctggcatttgaggacaacccagttgctattaagattttcaatctcaacaagtacggagcacccacaagcttcaatgcggagtgcgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattactttatgctctacggttgatccaaatggctatgattttaaagcacttgtctttcagtatatgccaaatggaagtctagaaatgtggctacatccagaggaccatggccttggtaagcagagattcctaactttgggtgaaaggattagcttagccttggacattgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatcaaaccaagcaatgttcttttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgtgtgctaattcaacagcagagcctagtaactctacaagtttggctgacttaaaaggatccataggatatattgcaccagagtacggaatgggtgggcaaatatcaacgaagggtgatgtctacagctatggagtactgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatggtttgagcctccacgatcgcgtggatgctgcatttccccaccgggtaaccgaggttttagaccccaatatgctacacaatgatttggatggtggaaactccgaactgatgcaaagttgtgtcctcccactggttaaggtggcgctcatgtgctccatagcatcaccgaaggacaggttagggatggcgcaggtttccactgaaataaactccatcaagcaagcatttgttgatctttccagtggaggaaaaatagtttga

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Protein seq

MIRLFAPCPKLIPLLAIFIISCSLPLAISDDTDTDREALLCFKSQISDPNGALSSWTNTSQNFCNWQGVSCNNTQTQLRVMALNVSSKGLGGSIPPCIGNLSSIASLDLSSNAFLGKIPSELGRLGQISYLNLSINSLVGRIPDELSSCSNLQVLGLWNNSLQGEIPPSLTQCTHLQQVMLYNNKLEGEIPTGFGTLRELKTLDLSNNALTGDIPPLLGSSPSFIYVDLGVNQLTGGIPEFLANSSSLQVIRLMQNGLTGEIPPSLFNSSTLTTIYLNRNSLVGSIPPITAVAAPIQYLSLAQNKLTGGIPASLGNLSSLVLLSLGANNLVGSIPESLSKIQTLERLVLTYNKLSGNVPQNIFNMTSLKYLGMANNSLIGRLPPDIGNRLPNLETLILSTTQLNGPIPASLANMSKLEMIYLTATGLTGVVPSFGSLPNLQDLDLAYNQLEAGDWSFLSSLANCTQLKKLALDGNILRGSLPSSVGNLPSQLNWLFLKQNKLSGTIPSEIGNLKSLTVMYMDNNMFSGSIPPTIGNLSNLLVLSFAQNNLSGHIPDSIGSLPQLTEFYIDGNNLNGSIPANIGQWRQLEKLDLSHNFFGGSLPSEVFNISSLSKSLDLSHNLFTGPIPLEIGNLINLGSISISNNRLNGEIPSTLGKCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPEFLTLLSSLQKLNLSFNDFEGAIPSNGVFGNASRVILGGNYRLCANAPGYGLPFCPESGSQSKSKSTVLKIVIPIVVSAVVISLLCLTVVLMKRRKEEPNLQHSSVNLRKISYEDIAKATDGFSATNLVGLGSFGAVYKGLLAFEDNPVAIKIFNLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTVDPNGYDFKALVFQYMPNGSLEMWLHPEDHGLGKQRFLTLGERISLALDIAYALDYLHNQCVSPLIHCDIKPSNVLLDLEMTAYVSDFGLARFMCANSTAEPSNSTSLADLKGSIGYIAPEYGMGGQISTKGDVYSYGVLLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEVLDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSIASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.269657 16.537720 0.668412

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0211800 SBH 0.720620 0.353773 0.376538
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g12010 RBH 0.431697 0.447869 0.085745
Nipponbare | IRGSP 1.0 | RAP-db Os02g0211800 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0008530 RBH 0.000000 0.0 0.584907
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0008630 SBH 0.0 0.0 0.188894
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0008430 SBH 0.369193 0.439994 0.324075
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0008360 SBH 0.0 0.011065 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0008440 RBH 0.446222 6.642202 2.918477
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0007000 SBH 0.0946105 0.2399255 0.2444645
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0008300 SBH 0.0 0.094379 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0109200 SBH 0.037638 1.008661 0.1829405
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0008750 SBH 0.030803 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0008370 RBH 0.0 10.856252 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0008680 RBH 0.0 3.415025 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0008650 RBH 0.078570 0.135230 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0008400 RBH 0.0 0.591079 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G008560 RBH 0.0 0.748206 0.150921
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0008560 RBH 0.0 1.657690 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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