Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0036750 | OGI:01103130 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:34961850-34967248 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttatgtggtcccacttgaggtaccctcgttgctttctattgaaactccagaaatcagcagctggaattgcctcgatatgtcagcgtccatggcttccttctgtttataggacctagacaccagttgcgtttcacatgtacctgccggtaggcattctttgagcttgataacaatgtcagtcatgctcggcctatcaatggatgtgttttccacacagctcatggcaaggtctatgacactctgtacggaagtggcatcatactgatgcatcagtgtactgtctacagcatcatgaatgcttcctttagcaatcttttggcgcacccagtttggtaggtgcattggttctgggtccactaacaccgatggtaggccggtaatgatctccaagaggacaatgccgaagctatagacatctgctttaactgtgagttggaaagtaacatggtacctgagatgtaagaacagtactaaagtcggcttctctttaatctgcattactcacttgactcgaaccagagaagaagtgtattgaactaatattggtcagttaggataactcactcggggtcaaggtagccaacagtaccggcagcaacagttgatatgtgtgtatgagcGggggtgtaagatcgtgaaagaccaaagtcggctatcgtggccacaagattctcatccagaaggatgtttgcagttttcacatctctgtgaactattggtggggtgcatgattcatgtagatactccagtcctgcagtccatcaagattcatatgtttgtcaacttctatgctgtttagtttctaaaagagggtacaagattgaagtggaccttgtgctgcatcaagtgcaatgtgaagtcgctctttccagctcaaactgtagtcttgtcctgttcaaggtgcgacgaatcgacactcataagtaccatttgggcatgcaatatgtatgggtaatatagtataagtgttatctctagagtttaggtcctttttagtgaacaacgttaaatttgttgtaatgaatacaaacctcctcttaaaacttcttgtaggtttcctctaggcataaaatcatacacaagggcaaggcatttcttgttttggcaatatcccacaaaagtgacaaggtttttgtgatgaacttttgacaaggtttgcacctgaaacagcagcagatatcacagAaacaggctttcactggaatcaagaaaAATaatatgcatgAaaacaatatgctgcaaataactattttacattctggaggggaatgatctgattcgagtagtccaatagttcacctcagggaggaaatcctttgatagtgctatagatgtctcccggagcaccttgactgccacttcctctccattctccaataagccatgatAaacagtaccaaatcctccttttccaatgatcgattggaagttgttggttatagtcctcaactctgtatatgtgaatcttttcgtgtcaatatgcaggggactttcctcttcattcatatcataatcgtcgtattcatttgattttcctgcaaagtcccaaatcatgtacaccaaacaggaaaccaccttttgcaatgattAaaaatgactttggagattaatcttccgttttacctttccaacataacttccagaggatgcacagcactactaggagggataccacaggaactatcacactaatgagcAaaatatgcgtgttcttctcatttccacagtagctagctctgactttggagcatatgggattgccttctagcctagtacaccaatggtcagttactccatccgattccaaatgcaagtcatttaagccttctaaactctttcctaaatgtaagtctttaggaacttctaggcacttttgtttcttccccatttacacttgctaactaaatgctacattgctacccatctcacaaataagtgggtgtatttcccaatatagtagtacaaatgaagagcaactaggtcatttgagctgttttcttaattcgcgtgcttcatgtgcacaagtcgaaaacgacttacatttggaatcagagggggtattaaatatatagaatagagaaggggagtatggcagccttttcaaatcaaattactatgattataacatgtttccatcttccaacacgatggactttttgagttccagtagtgcttttgaacaacttcaactttaaaaatcaaaacaataactagtacatgatttataaaccacatgatgttgctaataaatctgttcctgtaaagttcaaagcttatagatgctaaagcatttataattattagatactgaacttccaaattagctttgtttgttgctttgcaataaggtgtctgtgttgtttatgaaccttaaattaactgatactattgttttgtgataactagtcggttttaggcttttccttgtagaatatttatttaatttgatagttttccatataccaagtgaggagccatgaaagggaGcgTttcctaaccttaattcaagctgaccggccttaactctttgaagaatagaaccGAGgattggtccatcgagctgattaTttgacaagttcctgaaaacaatacTttaaatgactcattcatctAaaatatatatatcatcatcatccaaacatttagtcagagacttacagcactctgagtgagttgagttgatagtctggaatagcgcctgtcaaattgttgtgtgataaatccctatacatattttagtgttcagggtacacgacacataatttcatttagctctatgaatgctatattgtagacaacacttacaagttctccagtgatggcattttcatgagtgaaatgtgtaatgcacctattaatccgctggcagacAggttactgcaaacaatcacatctcaatacaagtcagactaatttagtcatggcattttaagacagatatACacgtgactaggcatctcctataatagtatattcaaaagcAaaaaaaaatgtatttggatcaacatgtataactccaatggttaaaaaaacataTttacaatttggttatgtacttacactcggatgatacttggttttttgtttccataattacattccagaccttgccatgaatactcccttggggagcatggatctccattccagtttcttgttaaactgtagtatttcttgacttctttcatgtaatcaactacagggagagaagaataattgaagtaaacatgaatggaataaaggaaattgctgcatttcttgaaactgtggtttgatcagacgctgctgtttcacaatgatcctatgaacctgcggcatacatggcacgcatgtctaatgtctctgcgcaataatagtgttactgatcataccatcgtctgaagaagtggtgaagctgtccgtatgaacaagggagtacacctcgaacgcgttgatgagcggtggcagctccgagctgggcgtcttgcgcagggtgaagcctgtgcccttcttgcgcaagaactggcccctctgatacatgctgtccaccactaacaggggtgGTgtgtagttggagaacagcaggctttcatcgctgtagatgtcgaatgtccgggttgggctgttgtcacctatctcggcgaagtggaagatgggTAgCagctccaggctcatgaagtcgaggttgtTGAtgatgctcacattgacgtaaaactctgagaaattgctccttatggtcgaggccttctgaaggatgagttctggcaccaggaagtagtcgtttccaggaagccttctcacggattggttggtgctcacgttgagccaggggaattcgtagcgctgggctgcctcccagaagcgatctatgggatcatccgggtatcttgatcaccacagcagatacatggaaatatggaccgtgaggtagactgtgattgtaatgtagataatgaaaacagaaaaAGgAaaaaaagaacttttggatcaccttgtgatgaaatcatcgaccaagccaaatcttctacgagttaagtagctgatggaaacagaagggctcagaaatgggtacattgcatcctctaatatcctcaagtccagtgtagatatgaagggagttcccgatcccaagtttatcagacagacagacatgttggcgtccggagcgactgtgatcacctctttccagaccgtgtctgctggattccagtttgtcaagttcaccttcgtccagAagttgacgccgatgtggagttcaaagataaacggcaaaccattctccgacgacttgttcccatcgtagttcccgtaagtgaaggtggctctgatgagatacttcttaccactggtGgttggcattgtataacagttccgttggccatcagggaagcttctcagggtttcttcttgcttatttgtagcacttctcttgtactgtgccagaatactgtagttcttgccgccctcgacatatccttcgtcagaaacatatggcaacgttgtgttcttgtcgacatggtcagaactagttgtatatccgcagtcgatgcttaaaaaccctgcattaaaaccactgtaagagagctctgcttgcttctttttcgttgttttcttgatatTTGGAtggacacctttttaggtttttaggtctaagagctggtgttcctactgtgagttggttttgctgtgagacgaaaactgtgcggccctgcaactgcaaggttttttttttttttccttccTgaagctggtggtatcagggtttctttagttcagtcaatctttttgtttttgaaaattagcttagccaatcgatttggcaagcatgaggatgacactagatgtactccatccgtcccataaaaaaccaatctaatactaaatgcgatacatcgtagtactaaaatatgtcacatctcgttttgtatgggacggagggagtagagccgtagagaggcctcgctagtgtgggccctcacgaaattatggcataaGATgatttcttctctttctttcttttttctaaccctcgagggGTttacttatatcaaggagaggggaggggaaaactgtacagtagccgtttaggctaggcaacgcgggggggggggggggggggggggggtttgagaaaccaccatgggatgaacccaacgtgcaacaatgtggTgaatacaagataattgtgtgcctatcctgcctccccggattagggtcttaatgcctttggctccactggccgaccaaaaccatatttcatcggtaatacagtttataatcccttgtagcggggtttcttcgttTCggaaaactcgatcatttttctctttctagatctcccatgaaattaggattaggatcgacttggttccacttctttttttttcctgggtgcagctgcgacgctcgtagtttaccat
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| CDS seq | atgaaaacaacgaaaaagaagcaagcagagctctcttacagtggttttaatgcagggtttttaagcatcgactgcggatatacaactagttctgaccatgtcgacaagaacacaacgttgccatatgtttctgacgaaggatatgtcgagggcggcaagaactacagtattctggcacagtacaagagaagtgctacaaataagcaagaagaaaccctgagaagcttccctgatggccaacggaactgttatacaatgccaacCaccagtggtaagaagtatctcatcagagccaccttcacttacgggaactacgatgggaacaagtcgtcggagaatggtttgccgtttatctttgaactccacatcggcgtcaactTctggacgaaggtgaacttgacaaactggaatccagcagacacggtctggaaagaggtgatcacagtcgctccggacgccaacatgtctgtctgtctgataaacttgggatcgggaactcccttcatatctacactggacttgaggatattagaggatgcaatgtacccatttctgagcccttctgtttccatcagctacttaactcgtagaagatttggcttggtcgatgatttcatcacaagatacccggatgatcccatagatcgcttctgggaggcagcccagcgctacgaattcccctggctcaacgtgagcaccaaccaatccgtgagaaggcttcctggaaacgactacttcctggtgccagaactcatccttcagaaggcctcgaccataaggagcaatttctcagagttttacgtcaatgtgagcatcaTCAacaacctcgacttcatgagcctggagctGcTAcccatcttccacttcgccgagataggtgacaacagcccaacccggacattcgacatctacagcgatgaaagcctgctgttctccaactacacACcacccctgttagtggtggacagcatgtatcagaggggccagttcttgcgcaagaagggcacaggcttcaccctgcgcaagacgcccagctcggagctgccaccgctcatcaacgcgttcgaggtgtactcccttgttcatacggacagcttcaccacttcttcagacgatgttgattacatgaaagaagtcaagaaatactacagtttaacaagaaactggaatggagatccatgctccccaagggagtattcatggcaaggtctggaatgtaattatggaaacaaaaaaccaagtatcatccgagttaaccTgtctgccagcggattaataggtgcattacacatttcactcatgaaaatgccatcactggagaacttggatttatcacacaacaatttgacaggcgctattccagactatcaactcaactcactcagagtgctgaacttgtcaaAtaatcagctcgatggaccaatcCTCggttctattcttcaaagagttaaggccgtaactgaccattggtgtactaggctagaaggcaatcccatatgctccaaagtcagagctagctactgtggaaatgagaagaacacgcatatttTgctcattagtgtgatagttcctgtggtatccctcctagtagtgctgtgcatcctctggaagttatgttggaaaggaaaatcaaatgaatacgacgattatgatatgaatgaagaggaaagtcccctgcatattgacacgaaaagattcacatatacagagttgaggactataaccaacaacttccaatcgatcattggaaaaggaggatttggtactgttTatcatggcttattggagaatggagaggaagtggcagtcaaggtgctccgggagacatctatagcactatcaaaggatttcctccctgaggtgcaaaccttgtcaaaagttcatcacaaaaaccttgtcacttttgtgggatattgccaaaacaagaaatgccttgcccttgtgtatgattttatgcctagaggaaacctacaagaagttttaagaggaggacaagactacagtttgagctggaaagagcgacttcacattgcacttgatgcagcacaaggactggagtatctacatgaatcatgcaccccaccaatagttcacagagatgtgaaaactgcaaacatccttctggatgagaatcttgtggccacgatagccgactttggtctttcacgatcttacaccccCgctcatacacacatatcaactgttgctgccggtactgttggctaccttgaccccgagtaccatgttactttccaactcacagttaaagcagatgtctatagcttcggcattgtcctcttggagatcattaccggcctaccatcggtgttagtggacccagaaccaatgcacctaccaaactgggtgcgccaaaagattgctaaaggaagcattcatgatgctgtagacagtacactgatgcatcagtatgatgccacttccgtacagagtgtcatagaccttgccatgagctgtgtggaaaacacatccattgataggccgagcatgactgacattgttatcaagctcaaagaatgcctaccggcaggtacatgtgaaacgcaactggtgtctaggtcctataaacagaaggaagccatggacgctgacatatcgaggcaattccagctgctgatttctggagtttcaatagaaagcaacgagggtacctcaagtgggaccacataa
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| Protein seq | MKTTKKKQAELSYSGFNAGFLSIDCGYTTSSDHVDKNTTLPYVSDEGYVEGGKNYSILAQYKRSATNKQEETLRSFPDGQRNCYTMPTTSGKKYLIRATFTYGNYDGNKSSENGLPFIFELHIGVNFWTKVNLTNWNPADTVWKEVITVAPDANMSVCLINLGSGTPFISTLDLRILEDAMYPFLSPSVSISYLTRRRFGLVDDFITRYPDDPIDRFWEAAQRYEFPWLNVSTNQSVRRLPGNDYFLVPELILQKASTIRSNFSEFYVNVSIINNLDFMSLELLPIFHFAEIGDNSPTRTFDIYSDESLLFSNYTPPLLVVDSMYQRGQFLRKKGTGFTLRKTPSSELPPLINAFEVYSLVHTDSFTTSSDDVDYMKEVKKYYSLTRNWNGDPCSPREYSWQGLECNYGNKKPSIIRVNLSASGLIGALHISLMKMPSLENLDLSHNNLTGAIPDYQLNSLRVLNLSNNQLDGPILGSILQRVKAVTDHWCTRLEGNPICSKVRASYCGNEKNTHILLISVIVPVVSLLVVLCILWKLCWKGKSNEYDDYDMNEEESPLHIDTKRFTYTELRTITNNFQSIIGKGGFGTVYHGLLENGEEVAVKVLRETSIALSKDFLPEVQTLSKVHHKNLVTFVGYCQNKKCLALVYDFMPRGNLQEVLRGGQDYSLSWKERLHIALDAAQGLEYLHESCTPPIVHRDVKTANILLDENLVATIADFGLSRSYTPAHTHISTVAAGTVGYLDPEYHVTFQLTVKADVYSFGIVLLEIITGLPSVLVDPEPMHLPNWVRQKIAKGSIHDAVDSTLMHQYDATSVQSVIDLAMSCVENTSIDRPSMTDIVIKLKECLPAGTCETQLVSRSYKQKEAMDADISRQFQLLISGVSIESNEGTSSGTT |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g51810 [UniProtKB/Swiss-Prot:Q9FZB8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0036750 | OsNaBo_01g0036750.01 | Chr01 | 34961850 | 34967248 | - | NAM | ||
| CDS seq | atgaaaacaacgaaaaagaagcaagcagagctctcttacagtggttttaatgcagggtttttaagcatcgactgcggatatacaactagttctgaccatgtcgacaagaacacaacgttgccatatgtttctgacgaaggatatgtcgagggcggcaagaactacagtattctggcacagtacaagagaagtgctacaaataagcaagaagaaaccctgagaagcttccctgatggccaacggaactgttatacaatgccaacCaccagtggtaagaagtatctcatcagagccaccttcacttacgggaactacgatgggaacaagtcgtcggagaatggtttgccgtttatctttgaactccacatcggcgtcaactTctggacgaaggtgaacttgacaaactggaatccagcagacacggtctggaaagaggtgatcacagtcgctccggacgccaacatgtctgtctgtctgataaacttgggatcgggaactcccttcatatctacactggacttgaggatattagaggatgcaatgtacccatttctgagcccttctgtttccatcagctacttaactcgtagaagatttggcttggtcgatgatttcatcacaagatacccggatgatcccatagatcgcttctgggaggcagcccagcgctacgaattcccctggctcaacgtgagcaccaaccaatccgtgagaaggcttcctggaaacgactacttcctggtgccagaactcatccttcagaaggcctcgaccataaggagcaatttctcagagttttacgtcaatgtgagcatcaTCAacaacctcgacttcatgagcctggagctGcTAcccatcttccacttcgccgagataggtgacaacagcccaacccggacattcgacatctacagcgatgaaagcctgctgttctccaactacacACcacccctgttagtggtggacagcatgtatcagaggggccagttcttgcgcaagaagggcacaggcttcaccctgcgcaagacgcccagctcggagctgccaccgctcatcaacgcgttcgaggtgtactcccttgttcatacggacagcttcaccacttcttcagacgatgttgattacatgaaagaagtcaagaaatactacagtttaacaagaaactggaatggagatccatgctccccaagggagtattcatggcaaggtctggaatgtaattatggaaacaaaaaaccaagtatcatccgagttaaccTgtctgccagcggattaataggtgcattacacatttcactcatgaaaatgccatcactggagaacttggatttatcacacaacaatttgacaggcgctattccagactatcaactcaactcactcagagtgctgaacttgtcaaAtaatcagctcgatggaccaatcCTCggttctattcttcaaagagttaaggccgtaactgaccattggtgtactaggctagaaggcaatcccatatgctccaaagtcagagctagctactgtggaaatgagaagaacacgcatatttTgctcattagtgtgatagttcctgtggtatccctcctagtagtgctgtgcatcctctggaagttatgttggaaaggaaaatcaaatgaatacgacgattatgatatgaatgaagaggaaagtcccctgcatattgacacgaaaagattcacatatacagagttgaggactataaccaacaacttccaatcgatcattggaaaaggaggatttggtactgttTatcatggcttattggagaatggagaggaagtggcagtcaaggtgctccgggagacatctatagcactatcaaaggatttcctccctgaggtgcaaaccttgtcaaaagttcatcacaaaaaccttgtcacttttgtgggatattgccaaaacaagaaatgccttgcccttgtgtatgattttatgcctagaggaaacctacaagaagttttaagaggaggacaagactacagtttgagctggaaagagcgacttcacattgcacttgatgcagcacaaggactggagtatctacatgaatcatgcaccccaccaatagttcacagagatgtgaaaactgcaaacatccttctggatgagaatcttgtggccacgatagccgactttggtctttcacgatcttacaccccCgctcatacacacatatcaactgttgctgccggtactgttggctaccttgaccccgagtaccatgttactttccaactcacagttaaagcagatgtctatagcttcggcattgtcctcttggagatcattaccggcctaccatcggtgttagtggacccagaaccaatgcacctaccaaactgggtgcgccaaaagattgctaaaggaagcattcatgatgctgtagacagtacactgatgcatcagtatgatgccacttccgtacagagtgtcatagaccttgccatgagctgtgtggaaaacacatccattgataggccgagcatgactgacattgttatcaagctcaaagaatgcctaccggcaggtacatgtgaaacgcaactggtgtctaggtcctataaacagaaggaagccatggacgctgacatatcgaggcaattccagctgctgatttctggagtttcaatagaaagcaacgagggtacctcaagtgggaccacataa
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| Protein seq | MKTTKKKQAELSYSGFNAGFLSIDCGYTTSSDHVDKNTTLPYVSDEGYVEGGKNYSILAQYKRSATNKQEETLRSFPDGQRNCYTMPTTSGKKYLIRATFTYGNYDGNKSSENGLPFIFELHIGVNFWTKVNLTNWNPADTVWKEVITVAPDANMSVCLINLGSGTPFISTLDLRILEDAMYPFLSPSVSISYLTRRRFGLVDDFITRYPDDPIDRFWEAAQRYEFPWLNVSTNQSVRRLPGNDYFLVPELILQKASTIRSNFSEFYVNVSIINNLDFMSLELLPIFHFAEIGDNSPTRTFDIYSDESLLFSNYTPPLLVVDSMYQRGQFLRKKGTGFTLRKTPSSELPPLINAFEVYSLVHTDSFTTSSDDVDYMKEVKKYYSLTRNWNGDPCSPREYSWQGLECNYGNKKPSIIRVNLSASGLIGALHISLMKMPSLENLDLSHNNLTGAIPDYQLNSLRVLNLSNNQLDGPILGSILQRVKAVTDHWCTRLEGNPICSKVRASYCGNEKNTHILLISVIVPVVSLLVVLCILWKLCWKGKSNEYDDYDMNEEESPLHIDTKRFTYTELRTITNNFQSIIGKGGFGTVYHGLLENGEEVAVKVLRETSIALSKDFLPEVQTLSKVHHKNLVTFVGYCQNKKCLALVYDFMPRGNLQEVLRGGQDYSLSWKERLHIALDAAQGLEYLHESCTPPIVHRDVKTANILLDENLVATIADFGLSRSYTPAHTHISTVAAGTVGYLDPEYHVTFQLTVKADVYSFGIVLLEIITGLPSVLVDPEPMHLPNWVRQKIAKGSIHDAVDSTLMHQYDATSVQSVIDLAMSCVENTSIDRPSMTDIVIKLKECLPAGTCETQLVSRSYKQKEAMDADISRQFQLLISGVSIESNEGTSSGTT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.272363 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0810500 | SBH | 0.511117 | 0.479692 | 0.997975 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g59550 | SBH | 0.662675 | 0.506416 | 0.291896 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0810500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0037560 | SBH | 0.234836 | 16.601141 | 1.968481 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0037020 | SBH | 0.079515 | 5.297422 | 0.482515 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0037420 | SBH | 0.126419 | 13.190196 | 1.515276 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0036820 | SBH | 0.024453 | 0.586236 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0036480 | RBH | 0.628185 | 2.188874 | 2.062449 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0569100 | RBH | 0.4095195 | 3.1655185 | 1.536893 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0036230 | SBH | 0.020083 | 2.717001 | 0.266008 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0566100 | SBH | 0.9547055 | 1.559824 | 2.760558 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0036430 | RBH | 0.0 | 0.222451 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0036490 | RBH | 0.050741 | 5.263038 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0036660 | SBH | 0.469056 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0036740 | SBH | 0.006472 | 0.131972 | 0.249838 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0036540 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G037060 | RBH | 0.000000 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0019820 | SBH | 0.0 | 0.0 | 23.738211 |
