Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0010130 | OGI:01025120 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:8203080-8214570 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggtaacacatggttgactacagccctgcatatataagaaacaataggaaatggtgTttttttggcacaaacataagaagactttgggaaacagtgtgcagcgaatagatatagcaccaattataagagtataagttctggcgatatttgattagaacgtgcatattgtacagacaccacatactatttatacgaattcatttatcgttctgctagccactagggctcgcaagcctgtaagacgtagaagtaatgtcatttggtctgatggcttgcacaaaagaacacatcccctatttatattcccactgcaaaatacattgggcaaaatatgtgagcattagtcttgcttgatcagggacaggagtatacgccttggcatgccaggtgcaaaagaccgctttggtggggtgatattatatggagccctcaagtcctaaagggcaaaatgtaatgtagagtcagtttttctgtaacaaatgagcacacaggtAatatatagttggctaacaatgtttacatacattttgggggctgcggggcagtttgtctacgaatagcgcacgcacaactgatgctttctgacaatcatgttcacgaggagatgaacTAcagatgcaatttgtttgagccatgagaaaactcaaagAaaaaaaaacaaggaacgtaaatatgaaactgtgcattgtcacttacccttcctgagcaagatcctcatcaattgcagaagatttacgttttttgtttggttgtgccatagccaggacctgataaagcattagtggtcagttaagtttgataagggacagacatacatatttgctctaagtacagaATatagtgctagcctctgaagtaggcggtgttgtcccatgctgatcatcacggctatcagttgtggcctatgcacaagcaatattaatataagaatttacaatcgtctatatgtaagagAGTacacattgctgcagaatgaagctatatgatTAtacctttggatctggaagcaccaatggtgtggaaggtgtcatagattggagagaagagccaattatcgtgtgcggttcaattgcatcagctggtgatgagccatgttgagaagatgccacagaagcatcatggctaggtagagtacctgtgtgggctgcatctggtgaggctagcataagggaatccacttggtaagatattctagctctctgcaatgagccacgtgacacactagttctaatgacatattgtttcccaaaaactgctttgatttctgatggaactatacctcgtgctccttggacagatgcaaccaggttaagaatagggatgccaatcaattggtagccaatttctccaaagaaggtaaactcagctgttttggcgtcatggttcgctaaatctgatgggtcgacacctacgatagccactctgtacctattatagaaggtagcagaagtaggtcttatgttctatagctcaaattgtagcatactgaatggtttattatgtaaaacaatcgagaagagctgaacgtgtgtaggtggtaagattaccttgtttcaattgcattagtgatgcacctcgagcatttatatgtgttcccttctctgcctgctcctctcttacaggtgctgcatgctatgtaccaccaggcttcagcagcgactaaatccttgatggctatcttgacaatatagctgttgccctggttcacatgcgagaaacagaggaagtaaaggatggcactcataacacatggatggaaattatacaatgtaatcattaggtgtggggaggtacactatattaccaaggcttcgtggggattaaggtcacagatatcagaaacttttacatgtacagcttctttctgaccgaagttcggctttattgcccttaccgcttgtgggttaccatggaggcttcaaatatgaaacaaattagtgttttggtttgtaggctagggaaatatggttgatccatataacacataaactaaggaagatataagttgaacaaagaagaagcatgtttatgtgtatggaaagagtgcagcaaagagatgcctgcttatgagagaaattgttccctggattggtgcattgggataccacctacagacagtgctaccttgtagggctagttggtctggcaagcatgaaagagtacattatttaagcaagaacaggcaaatatgtaaatgggagaggtgataatagggtaagaatttatttcttacgatctcggaatttaacagttaatccaacaaacaatataacaacaggtccatggtctgcttgctgctgtaagttttcagcgtggaactgtGTAgcatgggcaccctacaatgcaacgacagcagtttcgctgtaggcacatagaagaatgaaggggtggaaaataatgtgcatgaattaagatagtattcacacttgcaaataagagagttgtgaaacaatgttgatattataaacaaaaAAGaaggactgtacatgtgtAaaaagaaactgacaatacatgtgcggacaattaagtcattttgtatctaatacaaaagcagctggaacaattaagcagattaacgcatacaTaccttccattggttatgtggacattaagcacagctttcataacacctccacaagaaacagtttgcactggtccaatggctgtcattatacctatagcatctacaggagtagtataagggataaaatttgcacatgagtaagtgagggcagtaagcagggaatggacaaagctaataaggaatgagatagattgatctggaccaaacagagtcacctgaaagaatatctttcctgtgagcacggcctctgagttcatcaaaagaaagaaccttataagcatgagatgggaatgtggatggtgcctcagtgtcttctctaacggttgtgtgggcagtgaattttgccatgaccatccgatcaacaggcctgtactgagggcgcgcctcagcaacttcgaagtacctgatgtaatacacaacatcctccttcagcaaaggcttgaattgagaaacatgacgtcctgggatctgcgcatccatcatgtccccctgttgatgtttggatgtgtaagagacaaatagcatggagataaaataaggcatgaccatgtgcttattgctatacctgctcatcaagcaggactaaatcaagttgcagaatcttatcaggcttctctaacggttgtgtgggcagtgaattttgccatgaccatccgatcaacaggcctgtactgagggcgcgcctcagcaacttcgaagtacctgatgtaatacacaacatcctccttcagcaaaggcttgaattgagaaacatgacgtcctgggatctgcgcatccatcatgtccccctattgatgtttggatgtgTAAgagacaaatagcatggaggtaaaataaggcatgaccatgtgcttattgctatacctgctcatcaagcaggactaaatcaagttgcagaatcttatcaggttcatttgctgcagtgaactgcgagaagcgagtgactcgcacttggacatgccaacggtgtgattcctgtgtcacatcccttagcatagtgtaatccatctgcaacacataaagaaggcattacataggttagagggaaactataataataataataatAccttgcatgatatgaagatataaagtcctaattgttgaaggaactgtggtgcaggatatatctttttctttttcgaggtgggaactgtttcccaactgacagcgtttcaagcaggcatgtttaaaagcaactgattgcatccaagagaagaatatgcaaaaataagaaagaacaattaatatgcagatatggaagacactgcaacaatcaactggtcaaataggaagaacacaagcatgaacaacaactcattgaagggtAaaaagaaagcagtaacaaatagcgaaaaccAaaaatatggatacccattgtggatagaacactgtatgacgatgagttcttgcttaagttacacaagcaaacagtaacatggagaaatggaatcatagaagaaactggtgaacaaaaggagcaaagattcctagctgtagtcatagtgacaaattgacaataagattaatctacagcaacgataatatttcagtgtagacgatgttcctggtagtggaacaaggcttgccatcatcatcctctatcaacaacttgaggccttgcttcgatgtagcgcgcgaaatagcgacatatagctgaccatgtgtgaagatagggtttccgaggtatacaccaacttccccaaagtttgcccttggcatttgtttattgtcattgcataacatagcctaattgggaactgccttcgctggagcgtgaaaggccactttggactgttcccacttaggacaattcgtggaatacagaccagctggccaatatttgtgccagtcatgattttggactcaaaaacataattactgagtcgggtgaccatcaatcttgtcccattgcaaaggccgagtgattggttaatgttgcgaagcaggactacaactgaaccaattttgaggaatatgtgatgttctgggaaattgtttatggatattgagtttagaaattctatggggtacaatagatcaaaatctgcaggcttttcatgtgtatttgaaatagtgtcgctgctaagatagtcttttgcatccccaggcactttagcaagcatcttatcattaatctcatcaacaactgtattgacgggacagacaattgcacgctgagaaaggtaaggaatgcagtcatagttcaattcaaaatccgagtacacaacatcaattatagctgtaatcTtgtcaccgcagggagtaagcagcaactccttaggtatgtctatccatgtcctctcaacctcaccttgtcttttgttcatgggaacacgaccctcaccaatgtcaagaacccatttagcaaactctgccaattcacccctggcttgctgcgacagggatggattgtgtagcctcatgttaatggtaaggtgtaagacttcaacatgcttccatagtgcagacctaaccagcgaagcatctaccacatcagctcttgtacctttctcaatcactggtaagacttgcctaaaatcaccaccaagtaaaataggtttacctccaaaaggcttatattcattagctggCTcatcagcggattgaatatctcgtagagttctatccaatgcctcaaagcacagcttgtgtgtcataggagcctcatcccatataatcaatgatgctttcctaataAGatctcctaggattgtccctctacgaatagcacacatcgaccggtcatgtatatctataggtatccgaaaccgtgaatgagcagtccttccaccaggcatgagcagagctgcaaccccagaagaggcaactgcaagaacaatttcacctcttgatctcaggtttgccataatagcattccacaagaatgtcttccccgttccaccttgtccagatatAaaaaaaatacacttttcgtgatggtctatcctgtcaaaaatcttgtcatatatcatcctctggtcattgttcaagctggcatacatggacaaagattcttgatggaggctatgttggttaaagctaagctcttccaagataagcctgtttgctgcactggatcctgaacaatcaactggtgttggcaaattgtatgatgagattgataagccATTatttgagaacatggcatccaactctttgagcaaggtatcctacaacataacttctagaatagctgtgcactgtactccaagagctttggttaacttgtaagcaaaatcatctaccatgtgtctctagtacttatcaaacaaaacccgaacatcacctacatcacagtgtgctagtacagttatgaaaaggttcctgagctggtatgaagtagcccagataactgcctcctcaaagaggtgatcccattccgcgtcatcaccaatgagaccacgtgcccgacaggcttcacgatagctgccatacagcacaccttcatatgtcctaatatcttcaaaactcatacatcctcgaactaccatgagcaacattctaagatagaacggctcccaagtacttggatggatgtgccttaatctccctatcttggttcctcttttacgctttgtccaaactttcttgttaggatcccagctaaacttggaaggaaattcacaataggtgagatccctggcaaagatgtgacgttggttggtagcaaaccattcaataagcattgttctagaggaatcagggtcttctatgacctcttcaaggtcagctccttcatggtatgtcacgaactgcatgttcggcaagtgcacaatgaggcgttcaacagaaggactccttccatggatctcaaaaccatataatctccagaatgattcacaagttgataagtatctggatttgatgtattgcataaccttatctatgcctccattgctagcagtatgagcctctgtcttttctgaagtcctgtggctgaaaacgaacatagtcgaatcacttcccttatttatatacttAaaaaggtacttgataaggtatgttttattgcaccattccacattgatatgagcttggagtttcttcagaagagctggattataagggacaacccaccggttatctagtgaaacaccattcttcaccacatagcgaccatcattgtgtcgtcgatagataggatatccatcatcatctatggtagtaacatcacagaactgttttggatagccctttgaacaccgaccatccttcatgctagggctgtttggattgtgctcaccacatgggccatgtatcatgaattcatcaacaagaccaaacccaaacctatcagctgttatatctggtatctcagcacagatcaggttgtcaatgaatgcaggtgaaggttcttcagattgagctgtgagccatgttaatgtgtgggaatgcggcaatcctcttttttggaactcaacagtgtacacaactgaaaagcaaagcaacaagaaaagaacagataatgtgttaggggaagcaatagatgtgttaggaaggagatatacgtaaagataggacagctatgatgaataagataagtaacacaccagcttttatgggaccaaaggcttctccattcttaatagatgtgatgtactcatctagcttcatatggtaaacatgtgtgaccatatcacttctatcacttggtttttgtcctgcctcaaaacgaatagcttcaataatctctggccatttagaattgcaggtgaaagttgagaatacttgaggaggaccgtaagaacggcagattgccattgaatcatggtagttttgaaccatgtatcaccttcctcctgtgaaacttgatggcagaattaccttggtgccaacatcctttccatcactgtctcccctagcaacagcatcagatataccttgatgtgtctcagagtgaagttttttctggttgagggcatggtatgtgagtcgagatgtctctatacatgagaaagcattcacagcgagctgatcagaaagcctaccacaacaggtgaatggattgggctcatccttttgatagtgggactcgtaccgataaaattcaagcatcgatgcttcgtcgcgactaccgggtagctgatcatctacctctctaagcttgataccagtatgaaaacccacatcaccatatgggaatagaagcggatactgcagtgacataagggctggatgaataggtgacaactgacataactcacctgaatgcttctgcacaatgacatcaaactttgatacctcacaagatgcaccaggtataatcagtgctgccaactcagaggtggtgggaaggttgtaacggtcactctgagaatggcctgacccaatgagcttgatagcaatctcaggagcacttggagaaagcagcttgtcttgagcaagacggaactgttgcacaagaggattgaactggtcaagcatcgagataagctcttgcacaataacaggatcagggacatccccaggattatcagtgtgatcaaaaatattaagcctattatggagctcattggcggtgtcATatatgtacagctgggtgaattccggacgttgtccaggagcaggaatcagagaaccaattctgtgatggacaacaccattgatacgaaaaacataaggcccctgaccagtgtttatgctcctatcaatgttagccccaagcgatgtgaatgcaaataatgaattatattgcctaataagtcgcatgaaagagttggaacaggcaccgccatcaaaacgaatcaagtcttgtaagataggaggaaaaggcttgggtgcgggtaaggagatctttccaccacgacaacacagattgtatgcaatcctcttggctctgtgtgagctctggctaacaacccttttttggtaccaaaataatgcaccacaatgattgcattcatagtcagggccaccataataagaactatctggtacgtagctataagagcggaaaggaaacctataagtagagaagcatgcatatgtttgtccagaaatagatagagaggcAaaaaaaaaagggacaaaggcaaagcaaagcaaggctgctactaagatattacctttaagaatttgcatgtgctcctttggtatggaatatgtgaatctcatcgacagtgaacgcggcacatgttctgtgcaaatagaagaagaacggaagaagagaaatagcaaataagaaataaagggaaacaaaagcaagaaagaacatcgccataagcgaccagaaaggatcatgtacataagcaggtcaagaaccttgtcgcaaaataagacgcattttcctagcggcctgtcttttttcccggttcactcgagcaacacgtgctagcactattgggcaaaaatgatctcctatgaaaaatttaaacaggaaaaacaatcgatccgaagaagggaaaaggccttagcaagctaagcaacacaacaaatagtagtccagagctaactgttgggttgagaagactgaatgtggccagctccacgactccctgtggaagtgatgcgaggagatagaatgagggatcggagagaaaacaaagctaagctagaaagaaccaatgagcaaatagatgaacttatcaatatgaacatacattttgagcatatcgtatcacagcaagtggacaactgtacaaaaatatgagaaaatggatgtgcaagggataagagatgacactaaacattgagacagcagcgactacagcaagcgtacatacctatagtgcatgatgaactacccatgagcactgagaacctagtggcaccgcgggatgatgacagctcatctatcggaaggtagaattgcgaatcaggaaacaaaaaaacaacaattatcctaatgacctcgctaactctcagactattgagcgtacatacctatggcacatgacacaccacccatgagctctaagtgcttattggcagcagatGAtatggaggacccatctattggtgagcaaaagtgtgacccatctaatggccttgctaactccgaggcttgcatacgaaactataatgacatcaccaagtaccatgtggacgcttccgcgggcagatgcgaacgaatctagatggctccttgtcatttctatacaccaagaaacgaaaggagcaaaatatagacacattcagaaaaacatatggatgaATatataatggagagggaaagcataaagaacagaggcacgagctactatagaaatatggaagaaagatagatgcatataagcaagcactgaataactggacataatatgacatatctaacagcaacagagtgggaaatcatcaagggctgaaccaggagctctcggatgcttagactgaaacatacaaatatttgaaaatgcgtttacgaaaatggtaaaacaccaaagacataaccacattgaaaggctaacccaaacatataactgtataaggtccagcaaaggaagaaacatatggatgccgaacgaaatcaactggcaacaacacaagcgatcgaaaaacagccaagaatatatatcacagcggaacaatgtaaaacaaagtaatcggtaattgaaggagggAaaaaaagaggagcgaatatAtatcatagcggaacaatgtaaaacaaagcaattggtaattgaaggagggaaaaaAGaggagaacaatatatatgaaatccaccgaacagctatactggagacaaaagcatcttggttTAtacatatcgcagcatcgcatatgtgaaatgaactaaacatgtatcccacataagcgataaaaaaaccaacctacgaaagaatatgtaacatagcaggacaatacaaaaatgaaataatgtaaATatatgccaaagcatagctaattagcaatccaagggAaaaaacagaggagcaccatatatgcgaaatcaagcaaacaggtattcattgacataatcatctcagtttatccatataccacagctccacacatatgtaatgaacacaatagccatcccagtgataaaacaatgtgatcttgtactaaataccttagcgagcagtagatgacgaaggcaaagatgcccccctccctgccccaaaagaagatgcgatgtgtgggagagacGccaattggagctcgcaacctggaaggcagagaaaaaaaatacactgagcacacgcatggatggaacaacgtcggcattgcaatggggaaatcgacagcgagacacggcaggaaagatgaaaaacgaaataacataaatatatgccaaatcgtagctaatcaggaatctaatgaaaaaaacagaggggaaccatatatgcgaaatgaagtgaacaaacatccagtgacataatcatctcagtttacccatataccacagcaccacacatacatactgaactgaacaggcatccccgtgataaaaccaggtgatcttatacttaataccttagcgagaagtagctgagggaggcaaagatgCccccctccctccccccaaagcaagacgcgatgtgggagagacaccaatccaagagcgcagcctggaaggcataaaacagggaaaaaacagtgagcacaagtatggctggcacaacatcggcactgcaatgcggaaatcgagagcttgcaatggggaaatcaagagcgagcacaacaggaacggtcggaccacacgagacgatgcggtgagggaaaccaccgagctggaaatccccaagaactaagcgggaggagcagcaaatagaaccagctccatatatggaagaaaaaagggagtggaagaaagaaggagcgatgcagattacctcccctggtcctcatagggctctccgcgtagtggagcagctgtagccaaccccgtcgccaccgtacgcccatggcagagcactatcgtcgctccgtcgctgatggtcagataggggatggagaaggggca
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| CDS seq | atgggcgtacggtggcgacggggttggctacagctgctccactacgcggagagccctatgaggaccaggggaggctgcgctcttggattggtgtctctcccacatcgcggggGcatctttgcctccctcagctacttctcgctaaggttgcgagctccaattggCgtctctcccacacatcgcatcttcttttggggcagggaggggggcatctttgccttcgtcatctactgctcgctaagaaatgacaaggagccatctagattcgttcgcatctgcccgcggaagcgtccacatgatgggtcctccataTCatctgctgccaataagcacttagagctcatgggtggtgtgtcatgtgccatagatgagctgtcatcatcccgcggtgccactaggttctcagtgctcatgggtagttcatcatgcactataggtatttgtccacttgctgtgatacgatatgctcaaaatatggattacactatgctaagggatgtgacacaggaatcacaccgttggcatgtccaagtgcgagtcactcgcttctcgcagttcactgcagcaaatgaacctgataagattctgcaacttgatttagtcctgcttgatgagcagggggacatgatggatgcgcagatcccaggacgtcatgtttctcaattcaagcctttgctgaaggaggatgttgtgtattacatcaggtacttcgaagttgctgaggcgcgccctcagtacaggcctgttgatcggatggtcatggcaaaattcactgcccacacaaccgttagagaagacactgaggcaccatccacattcccatctcatgcttataaggttctttcttttgatgaactcagaggccgtgctcacaggaaagatattctttcagatgctataggtataatgacagccattggaccagtgcaaactgtttcttgtggaggtgttatgaaagctgtgcttaatgtccacataaccaatggaagggtgcccatgcTACacagttccacgctgaaaacttacagcagcaagcagaccatggacctgttcctccatggtaacccacaagcggtaagggcaataaagccgaacttcggtcagaaagaagctgtacatgtaaaagtttctgatatctgtgaccttaatccccacgaagccttgggcaacagctatattgtcaagatagccatcaaggatttagtcgctgctgaagcctggtggtacatagcatgcagcacctgtaagagaggagcaggcagagaagggaacacatataaatgctcgaggtgcatcactaatgcaattgaaacaagagtggctatcgtaggtgtcgacccatcagatttagcgaaccatgacgccaaaacagctgagtttaccttctttggagaaattggctaccaattgattggcatccctattcttaacctggttgcatctgtccaaggagcacgaggtatagttccatcagaaatcaaagcagtttttgggaaacaatatgtcattagaactagtgtgtcacgtggctcattgcagagagctagaatatcttaccaagtggattcccttatgctagcctcaccagatgcagcccacacaggtactctacctagccatgatgcttctgtggcatcttctcaacatggctcatcaccagctgatgcaattgaaccgcacacgataattggctcttctctccaatctatgacaccttccacaccattggtgcttccagatccaaaggtcctggctatggcacaaccaaacaaaaaacgtaaatcttctgcaattgatgaggatcttgctcaggaaggttcatctcctcgtgaacatgattgtcagaaagcatcagttgtgcgtgcgctattcgtagacaaactgccccgcagcccccaaaatgacttgagggctccatataatatcaccccaccaaagcggtcttttgcacctggcatgccaaggcgtatactcctgtccctgatcaagcaagactaa
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| Protein seq | MGVRWRRGWLQLLHYAESPMRTRGGCALGLVSLPHRGGIFASLSYFSLRLRAPIGVSPTHRIFFWGREGGIFAFVIYCSLRNDKEPSRFVRICPRKRPHDGSSISSAANKHLELMGGVSCAIDELSSSRGATRFSVLMGSSSCTIGICPLAVIRYAQNMDYTMLRDVTQESHRWHVQVRVTRFSQFTAANEPDKILQLDLVLLDEQGDMMDAQIPGRHVSQFKPLLKEDVVYYIRYFEVAEARPQYRPVDRMVMAKFTAHTTVREDTEAPSTFPSHAYKVLSFDELRGRAHRKDILSDAIGIMTAIGPVQTVSCGGVMKAVLNVHITNGRVPMLHSSTLKTYSSKQTMDLFLHGNPQAVRAIKPNFGQKEAVHVKVSDICDLNPHEALGNSYIVKIAIKDLVAAEAWWYIACSTCKRGAGREGNTYKCSRCITNAIETRVAIVGVDPSDLANHDAKTAEFTFFGEIGYQLIGIPILNLVASVQGARGIVPSEIKAVFGKQYVIRTSVSRGSLQRARISYQVDSLMLASPDAAHTGTLPSHDASVASSQHGSSPADAIEPHTIIGSSLQSMTPSTPLVLPDPKVLAMAQPNKKRKSSAIDEDLAQEGSSPREHDCQKASVVRALFVDKLPRSPQNDLRAPYNITPPKRSFAPGMPRRILLSLIKQD |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0010130 | OsNaBo_01g0010130.02 | Chr01 | 8203080 | 8214570 | - | NAM | ||
| CDS seq | atgggcgtacggtggcgacggggttggctacagctgctccactacgcggagagccctatgaggaccaggggaggctgcgctcttggattggtgtctctcccacatcgcggggGcatctttgcctccctcagctacttctcgctaaggttgcgagctccaattggCgtctctcccacacatcgcatcttcttttggggcagggaggggggcatctttgccttcgtcatctactgctcgctaagaaatgacaaggagccatctagattcgttcgcatctgcccgcggaagcgtccacatgatgggtcctccataTCatctgctgccaataagcacttagagctcatgggtggtgtgtcatgtgccatagatgagctgtcatcatcccgcggtgccactaggttctcagtgctcatgggtagttcatcatgcactataggtatttgtccacttgctgtgatacgatatgctcaaaatatggattacactatgctaagggatgtgacacaggaatcacaccgttggcatgtccaagtgcgagtcactcgcttctcgcagttcactgcagcaaatgaacctgataagattctgcaacttgatttagtcctgcttgatgagcagggggacatgatggatgcgcagatcccaggacgtcatgtttctcaattcaagcctttgctgaaggaggatgttgtgtattacatcaggtacttcgaagttgctgaggcgcgccctcagtacaggcctgttgatcggatggtcatggcaaaattcactgcccacacaaccgttagagaagacactgaggcaccatccacattcccatctcatgcttataaggttctttcttttgatgaactcagaggccgtgctcacaggaaagatattctttcagatgctataggtataatgacagccattggaccagtgcaaactgtttcttgtggaggtgttatgaaagctgtgcttaatgtccacataaccaatggaagggtgcccatgcTACacagttccacgctgaaaacttacagcagcaagcagaccatggacctgttcctccatggtaacccacaagcggtaagggcaataaagccgaacttcggtcagaaagaagctgtacatgtaaaagtttctgatatctgtgaccttaatccccacgaagccttgggcaacagctatattgtcaagatagccatcaaggatttagtcgctgctgaagcctggtggtacatagcatgcagcacctgtaagagaggagcaggcagagaagggaacacatataaatgctcgaggtgcatcactaatgcaattgaaacaagagtggctatcgtaggtgtcgacccatcagatttagcgaaccatgacgccaaaacagctgagtttaccttctttggagaaattggctaccaattgattggcatccctattcttaacctggttgcatctgtccaaggagcacgaggtatagttccatcagaaatcaaagcagtttttgggaaacaatatgtcattagaactagtgtgtcacgtggctcattgcagagagctagaatatcttaccaagtggattcccttatgctagcctcaccagatgcagcccacacaggtactctacctagccatgatgcttctgtggcatcttctcaacatggctcatcaccagctgatgcaattgaaccgcacacgataattggctcttctctccaatctatgacaccttccacaccattggtgcttccagatccaaaggtcctggctatggcacaaccaaacaaaaaacgtaaatcttctgcaattgatgaggatcttgctcaggaaggttcatctcctcgtgaacatgattgtcagaaagcatcagttgtgcgtgcgctattcgtagacaaactgccccgcagcccccaaaatgacttgagggctccatataatatcaccccaccaaagcggtcttttgcacctggcatgccaaggcgtatactcctgtccctgatcaagcaagactaa
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| Protein seq | MGVRWRRGWLQLLHYAESPMRTRGGCALGLVSLPHRGGIFASLSYFSLRLRAPIGVSPTHRIFFWGREGGIFAFVIYCSLRNDKEPSRFVRICPRKRPHDGSSISSAANKHLELMGGVSCAIDELSSSRGATRFSVLMGSSSCTIGICPLAVIRYAQNMDYTMLRDVTQESHRWHVQVRVTRFSQFTAANEPDKILQLDLVLLDEQGDMMDAQIPGRHVSQFKPLLKEDVVYYIRYFEVAEARPQYRPVDRMVMAKFTAHTTVREDTEAPSTFPSHAYKVLSFDELRGRAHRKDILSDAIGIMTAIGPVQTVSCGGVMKAVLNVHITNGRVPMLHSSTLKTYSSKQTMDLFLHGNPQAVRAIKPNFGQKEAVHVKVSDICDLNPHEALGNSYIVKIAIKDLVAAEAWWYIACSTCKRGAGREGNTYKCSRCITNAIETRVAIVGVDPSDLANHDAKTAEFTFFGEIGYQLIGIPILNLVASVQGARGIVPSEIKAVFGKQYVIRTSVSRGSLQRARISYQVDSLMLASPDAAHTGTLPSHDASVASSQHGSSPADAIEPHTIIGSSLQSMTPSTPLVLPDPKVLAMAQPNKKRKSSAIDEDLAQEGSSPREHDCQKASVVRALFVDKLPRSPQNDLRAPYNITPPKRSFAPGMPRRILLSLIKQD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0010130 | OsNaBo_01g0010130.01 | Chr01 | 8203080 | 8214570 | - | NAM | ||
| CDS seq | atgggcgtacggtggcgacggggttggctacagctgctccactacgcggagagccctatgaggaccaggggaggctgcgctcttggattggtgtctctcccacatcgcggggGcatctttgcctccctcagctacttctcgctaaggttgcgagctccaattggCgtctctcccacacatcgcatcttcttttggggcagggaggggggcatctttgccttcgtcatctactgctcgctaagaaatgacaaggagccatctagattcgttcgcatctgcccgcggaagcgtccacatgatgggtcctccataTCatctgctgccaataagcacttagagctcatgggtggtgtgtcatgtgccatagatgagctgtcatcatcccgcggtgccactaggttctcaatggattacactatgctaagggatgtgacacaggaatcacaccgttggcatgtccaagtgcgagtcactcgcttctcgcagttcactgcagcaaatgaacctgataagattctgcaacttgatttagtcctgcttgatgagcagggggacatgatggatgcgcagatcccaggacgtcatgtttctcaattcaagcctttgctgaaggaggatgttgtgtattacatcaggtacttcgaagttgctgaggcgcgccctcagtacaggcctgttgatcggatggtcatggcaaaattcactgcccacacaaccgttagagaagacactgaggcaccatccacattcccatctcatgcttataaggttctttcttttgatgaactcagaggccgtgctcacaggaaagatattctttcagatgctataggtataatgacagccattggaccagtgcaaactgtttcttgtggaggtgttatgaaagctgtgcttaatgtccacataaccaatggaagggtgcccatgcTACacagttccacgctgaaaacttacagcagcaagcagaccatggacctgttcctccatggtaacccacaagcggtaagggcaataaagccgaacttcggtcagaaagaagctgtacatgtaaaagtttctgatatctgtgaccttaatccccacgaagccttgggcaacagctatattgtcaagatagccatcaaggatttagtcgctgctgaagcctggtggtacatagcatgcagcacctgtaagagaggagcaggcagagaagggaacacatataaatgctcgaggtgcatcactaatgcaattgaaacaagagtggctatcgtaggtgtcgacccatcagatttagcgaaccatgacgccaaaacagctgagtttaccttctttggagaaattggctaccaattgattggcatccctattcttaacctggttgcatctgtccaaggagcacgaggtatagttccatcagaaatcaaagcagtttttgggaaacaatatgtcattagaactagtgtgtcacgtggctcattgcagagagctagaatatcttaccaagtggattcccttatgctagcctcaccagatgcagcccacacaggtactctacctagccatgatgcttctgtggcatcttctcaacatggctcatcaccagctgatgcaattgaaccgcacacgataattggctcttctctccaatctatgacaccttccacaccattggtgcttccagatccaaaggtcctggctatggcacaaccaaacaaaaaacgtaaatcttctgcaattgatgaggatcttgctcaggaaggttcatctcctcgtgaacatgattgtcagaaagcatcagttgtgcgtgcgctattcgtagacaaactgccccgcagcccccaaaatgacttgagggctccatataatatcaccccaccaaagcggtcttttgcacctggcatgccaaggcgtatactcctgtccctgatcaagcaagactaa
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| Protein seq | MGVRWRRGWLQLLHYAESPMRTRGGCALGLVSLPHRGGIFASLSYFSLRLRAPIGVSPTHRIFFWGREGGIFAFVIYCSLRNDKEPSRFVRICPRKRPHDGSSISSAANKHLELMGGVSCAIDELSSSRGATRFSMDYTMLRDVTQESHRWHVQVRVTRFSQFTAANEPDKILQLDLVLLDEQGDMMDAQIPGRHVSQFKPLLKEDVVYYIRYFEVAEARPQYRPVDRMVMAKFTAHTTVREDTEAPSTFPSHAYKVLSFDELRGRAHRKDILSDAIGIMTAIGPVQTVSCGGVMKAVLNVHITNGRVPMLHSSTLKTYSSKQTMDLFLHGNPQAVRAIKPNFGQKEAVHVKVSDICDLNPHEALGNSYIVKIAIKDLVAAEAWWYIACSTCKRGAGREGNTYKCSRCITNAIETRVAIVGVDPSDLANHDAKTAEFTFFGEIGYQLIGIPILNLVASVQGARGIVPSEIKAVFGKQYVIRTSVSRGSLQRARISYQVDSLMLASPDAAHTGTLPSHDASVASSQHGSSPADAIEPHTIIGSSLQSMTPSTPLVLPDPKVLAMAQPNKKRKSSAIDEDLAQEGSSPREHDCQKASVVRALFVDKLPRSPQNDLRAPYNITPPKRSFAPGMPRRILLSLIKQD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0390300 | SBH | 2.377134 | 1.532203 | 1.219181 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g14200 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0390300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0017980 | SBH | 0.570439 | 7.315008 | 6.448701 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0008510 | SBH | 1.676330 | 6.431366 | 11.350247 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0008891 | SBH | 1.944198 | 0.000000 | 9.912401 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0131400 | SBH | 0.0018745 | 0.0067045 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0136500 | SBH | 0 | 0.0028815 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0010110 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G010260 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
