Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0390300 | OGI:01052260 | 5/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:16468660-16479809 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAAATCTTTTCTTGAAGACGTTATTCATACTTTCGCAACTTTGAGTCGAGGTCATATCAGTTGTAAAAGAGTCACGGAACACAATAGCCCACTTCTTCCTCAAAGCATACAGATTTGACATCCATACGTTATCCTCAAACTTGTATTCACTCAACAATTCATGCTACATCTTGTTGAAATGATACTCTGATCTGTCCTGATAGACACATCTCTTAAAATCAGTTAGAAACTTGTTAGGATGCTTATGAATTACATGACCAAGATTTTTACAACCATTTAGATAAATGTGCCACAAACAAAGACAATGACTTATATCCGGGAGTACAAAAGCAATTGCTGCTGCAATGGCTGCGTCTTGATCAGTGAAAATTGTGCTCGGATGCTTGCCTGACATTGCTATTAGAAAGGTTTCAAAGAGCCAAACAAATGATTCAATAGTTAGTGTGGATAATATAAGGTAAAGGAAGTTTATAACAAAGGGAAATTTCAGTCTATATTGTAGCTTACCTTGCATCCCAAATCTGCATTGTTCTTTTCAAAGTTTCTGTGTTTCTTGATTTTGGGCGTAGAGTGTCTGTTGCACCAATTTCAGTTATGACACCCATAATATCTGGTTAAAGAGAAGATATATGTAAACAATAAACCACTAATGTATAAGAAGTAAACGTAGGAAGACAAAAAAGGGATAAAGAGGTTATACCAACATAGAAAGCATTTCTGTCCACAAGAGACGGGGCGTCTTGAAAAGGTGTCAATGAAAAAGTTATGGCAGGAAAATCATCAAAAGCATCAATGCATTCTTCTAAGGTTGTCCATTTAGTGAATGAGATCATCAAAGGGTTCGTAACTGGCCTATATGTTCTGTTTGCATATCTGACAGAGAAGGAGTCAAAGTAGTAAACCTTCCCTTCCTGTAGAAGAGTCCTAAGCTTAATCATGGCAGGTGGATAGATTTGAACATGGATGCTATTGCCCTGCATATTGTGTATATAAAGCACCTTGTTAGTACCATGTTTGTATGTAAGTATTAATAAAGAAGAAATGAGTGTTAATTAGACTATAACCTTTTCATCCAGCAAGACAAGATCAGTGTGGTAGATCTTTGTTTCATCATTCAGATCATGGTAGTCCCATTGCCTAGATACCCTCGCTTTGATCCGTTTATCAGTGTCCCCATACATAAGGTCTGAAATAAGCACGTACGCCATTGGAAGGCTGCAAATAAATATTGAAGATATTTAGTTTATGTAAATATGAAGCATCACTGTAATGAACTAAGCAAGTGAGAAAACAGCACATAGAAATCTAGTAGCCTATTGGTGCAGCAGTGATACAGCATATACTACATGTGAGTACAATATATTTACTCCAAAATTTATATACAAAAGCCATTGCAATTAGCTGAGGAGGGAAAGCTACGCATGGAGCGGCCAAGCCTGCAATAGGAAATGATGCCCAATGTGACACCAAGAATGTAGGTAAATATAGAGATAAAATATATGCAATATGGCAGTGAGGGCACACCGCTTCCATTGTAGCAGAAAGTATCTCGGTATAAACAACATTTCTTGTTTGGTTTCCACATGATCCGTCATCGTTTTCAATCAGTATTTTGAGCCCTGTTCGGCTTGTTGCTCTTGAAATAGCAACATAGAGCTGCCCATGCGTGAAAACAGGTTTCTTGAGGTATATGCCAACTTGCTCAAGTGTTTGTCCTTGGCTCTTGTTGATAGTCATTACATAACAAACTCGAACTGGGAATTGCCTTCTTTGTAATGTAAAAGGCCATTTCATTTTTGACGTGCTTAATGTGATTCTTGGTATATAAACTGTTTCACCGATGATTGATCTAGTTAGTATTGTACATTGTAAAATTCTTTCCCCTAAAGCAGTGACTAATAATCTTGTTCCATTACAAAGGCCTATCGATTGGTTCAAATTTCGCAGAAGCATAACAACAACACCTTCCTTTAAAACAAGTTTGTGTGTAGGAAAGTTAGTTGCATTAATTGAATTAAGAAATTCAGGTGGGTATAACAGGTCGAAATCTGGAATTTGCTCTGAGCATTTTGAGATTGTATCACAGCTAAGATATATTCTTGATTCTCCTGGGAGTAAATCAATAGTATAATTGTTTATTTCATCAACTACTGCATTCGCAGGGCAAACAATGGCACGAGAAGATAGATATGTAGGGTTTTTATATGATGCAAGAAAGTCTGGATACACTTCGTTGACAATAGCAACGATTTTGTCACCATCTGTTACAACAAGAAGATCATCGGGAATTATAATCCATGAGGGTTGAGCTTCACCTTCTTTTGCAATCATAGGCAATGTTCCGTTACCAACAGCTAGAACCCATGTACTGAATTCATGCAATTCAATTATTGTGTTTTCTGGTAGGGTTGGATTTAACAGTCTCATGTTTATATTCATGGATAACAACGTCACATGTTTCCATAGGTCTAAATTTGTAATTGATGCATTAATAACAGCGAGGCGTGAACCTTTAGGAACAACAGGTAAGATTTGTCTAAAGTCACCACCCAAAACAACAGGTTTTCCTCCAAAAGGTATGATTGAATTTGTAGGACAAGTTTCAGAAAGAATGTTACGTAATGTGCGATCCAATGCTTCAAAACAGTGCCTACGTGTCATCGGAGCCTCATCCCATATAATAAGTGCACTTTCAATGAGGAGGTCAGGCAACATAGTTCCTCGTTTTATATTGCAAATGCTAGTTTCATCAATGTCAATTGGAATTTTAAATCGGGAGTGAGCTGTTCTACCTCTAGGTAGTAGGAGAGATGCTACACCTGATGAGGCAACAGCGAGCACAATCTTATTTTGTGATCTAAGTTTTGCAATCATAGCGTTCCATAGAAATGTTTTCCTAGTCCCACCATGTCCACTCACAAAGAAAAATCCAGGTTTGTTTGCACTGATTGAGGAGGTTATGGTGTCAAAAATCTTTTTCTGGTCGATATTTAGCTGTGCTATTAAAGAATCTGCGCGCAAGGACATCATAAGGGGATCAGGTGCAAGCTCCTCGTCAATCAATCTATTACTACCAGGAATGTGTGAAGCAGATGTTGGAATCGGCAAATCAAAATCTTTTATATTACCACCATTGTTTGCAAAAACAATTGTAAGCTCATGCAGGAGGAGACTAAGCAAGTGCTCATGTGGAATAATGCATCGTGGATTATCTAATGCATTCTTTAATCTACTATGGATGTCATCAGTCATATAAAGCCAATACTTATCAAATAATGATCGCACATTACTAACAGAGCAATAAAGAATAACGGTCACAAATAGTTGTCTAAGTTGTCGCGAAGATGCAGATAGTATGGCCTCATCAAATAGAAGGTATCATTCATTATCTCCTTCAAGAAGACCTCTCGCCTCACATGCTTCTCTGAATGTGTTATAAACAATGCCATTGTATGTGCGTACATCAGCATAATTCTGTGTGCCTTTAACTATCATCAAGAGCATTCTGAGGTAATAGAGTTCGCCACAGGTTGGGTGCACATAATAGATTCGACCTATTTTTGCAGTTGGTGTTCGCTCGCGCCATGTTCTAGATGATGATTCCCATGACCATTCCTTTGGAAACTCACAATATGTTAACAACCGTGCCTTAGAATATTTTCTATTAGCTTCGAACCATTCAGTCAGCATTGATCGTTTCGCAGCAGGGCTATCGAGCACCGCCCGCAAATCTGAACATTTCTCATATCTAACATAATTTTTGCCAGCTAAATGGACTGTTAGACGCTCAACAGGTGGCACTCTATAATGTATGTCAAATTCAAATATGCGATGAAGTGCCTCACACGTGGAAAGAAATCTAGCATCCATGTATTCTAATATCTCATCCGAGGAGCTAGATCATGATTTAGTGACATATTTCCTGTCTTAGAAGTAGTCTCAAAGTATATCTTTGCATGATCATGCCCTTTTGTAATGTATTTGAATAAATATTTAATCAGATTTGACTTGTTACACCACTCAACATTAATGTGTGCTTCGTATTTTTTAAGCAATTCAAGATTGTATGGCACGACTGATCTGTTGTCCAATGCAATTCCATTTTTAATTATGCATCGTTGATTGTTTCGTCGTCTGTATATTGTAAAACCAGATTCATCAATAATAGTTTCATCCTGGAAGTCCTTAGGATAATGTTTTCAACATTTGCCATTTTTCATGCAAGGGCAATTTTTGTTTGCGTCGCCACAAGGACCATGCATCATGAACTCACTAACCAATTCATATCCTAGACGATCTGTGTCATAGTCAGGTATCTCAGCACAGATGAAGCCATCTATTACAGATGCTGACACATCAGCAGTGGATGCTGCAAGCCAAACTAAGCAGTGGATATGTGGCAGCCCACGCTTCTGGAACTCGACAGTATACAGCACTAAGAAGGTTTAAGCCAATGAAAAGGTATGAGAAATATATAGGGGAAAAACTATATGGAAAAGAAAGTATATGTGCTACCTGCAAGGACTTTTCCGAATGTTCTGCCTTCTCTAATATCAGTGATAAAATCATTTACTTTCTCTAATATCAGTGATAAAATCATTTACTTTCATGTTAAATACTCGCACAATTACATCAGCTCTATCTGATGGTTGTTGGCCAGGTTCAAATCGAATAGTTTCTGCAATTTCTTGCCACTTAAAGTTACAAGTGAATGTGACAAATAAATCAGGCGAGCCATACACACGACAGATTGCCATCGCATCCTGATAATTCATCACCATATATCTTCTACCGCCGGTAAAGCTAGCAGGAAGTATCTGACGTTTGCCAACAGAATCTCCATTAGTAACACCTCTATCAATCGCATCTACGATTCCTTCTACAGTTTCAGCACGCAAATCAGCTTGATGATCTATTATGTATTGTATCCTATTAGCCTCGATAGTAGAAAAGATATCAACAACACTTTGGTCACTCAGTCAGCCATAACATGTGAAAGGATTAGGCTCATTTAGTCTATAATGGATAAGGTATCTGTAGACCTCAAGCATTGTAGCATATTTTCTACCAGTTCCATCATAATTTCTATATTTAATGCCTAGATGGAAGCCACGTTCACCATATGGAAATAGCAAAGGATACTGCAAAGCCATATATGATGGATGCAATGAAAACACTTGATGCATTCCATGATCTTTATCGTGAACAAGCACACCAAATTTATATTCTTTTGCTGAAAAATCGCCTACTATTATGCTAGCTATTTCACCACTTGTTGGTAGGTTATACTGCACATCATCTTTAGCATTGCAGCCTAATAGCGAAGAGTTATTTTTTCATTACCATGTTCAGAGAGGCGGTCTCTAGCATATCTGAAATTTTTAACAAGTTCATTATTGGTATCAAACATGCGTGTTAAGGCGCTAACAATTTCAGGGTCTGGTCTATCAGCATTGTCGCAATCATTTTCGAAAATATTTAATCGATTTTGGATTTCATTGTCAGAATCATAGATATATAGCTGCGCAAATTTAGGTGGTGCACCTCGTGATGGCAGAAGAGTACAAATTCTGTGATGCACAACACCATTGATTTTGAAAACATAAGGCGCATTCCCATTATTAATTGACTTGTCAATAGCTGCACCCATTGAGGTGAAAGCAAACATCGAATTATATGATCGAATTTGTCTCAAAAATCTTTTGGAACGTGCATCACCATTGAAATTCAATAAAGTTGCAAGCGGTTCAGGTAGAGGACATAAAGGAGGCAATTCAATTTTGCCACTTTTGCAACATAGGTTGTAAACTATTTTTCTTTTCGAGACAGCAGAGAGGGTTTTAACTCTCTCTTGATACCAAAAGATGGCACCACAAAATGGGCATTCATATGTCGGAGGTCAGTAGTACGATCGTTCTGGGTATGATGCTGTAACATACATATTTGATTATGTCAGTTTTTTTCCTTAATAAATGTAAAATGATTTGCTTTTATTAGAAAAATACAAACCCTTTAAAGATTGAATGTAATCCTTATCTGTCTGGGATGAACTACCACTGGCTTTCCTATTTGCAACTGCAGTCAATAAATATTTTAACCATATCTAAGTTATGCAGTTCTAGCAGCAGTATACTACAATAAAAAAAACACCTTTTCAGCATACCATTGCTATTTTGTGCCGGTGGCACAGGAGGCATCTTTGAGCGCAACGAACAACGTCGCTGTGTATGTAACTTTGATAATTCAGGCGTGAAATCCATAAGGGAACGTGGCCTTTTGCCTTGATCTACTCGAGCAGGTTGAGGCGATGCTACTACGGTAGTATCTATGTGCATTGCAGATGGACGTAACAAAGCGTTTGCAGCTCGTCTTTCTCGACTTGCACGTACCCTCTGAACCCTGTTTATACCCTGTTGTGACATCTGGGGAGTATATCCCAGCAACACACTTATACCAGCAATACACACACATAAAAGCAATACACTCAACGTCCTAAATTGAAGCTTTATGGTAGCACGGGAAGTTGGTTACCTGTTGTTGAGGACCTGAACTGAAGATGAGGAGAATAAAACCAAGTCTGCTTGCACCAATTCTTCCACCTATAAAAAAAAGTAAATCAATCATCAAAGATCACAACATTTAGTATGTGTCAAATTGACCAGCACACTATCGCACAGCCTAGTTAAGGAATTCAACCAACCATCAAGTCTGAAACACCTAGAGTTTGTCTAGGATAAAATGCACAAGCCACAATATGCATGCATGCTTGGCTACTTTTGCTATGAGACGTTTGAGAAACACAAAAAACCAAAATTTTGGGACAGACAAAACCTCTTTTAATCACATTGTCTCATGTTAAAATACTACTGCTGTCATTGAACAGAGAACAACTGTAATATATTAGTAGTTTGGCTCAAATAAATTTGTAAAAAAAAAATCTACTTTACACAATGGAAAGCAAAGTCTTTGAAAACTAAGGTTCCAACAATTTGCTAGGCCTTTACTTTTGAGGCAAAACTGAAACAGAGAAAACACTCTAAGCGGGGACATACATTAAGCCTGATGCATGAGAAAATGTTTCTTTACAGGGCATTGAACCTCCCTCTGGTCTGATGATTAAATTGCTATACAGCTGATTCTACTCTTTATACACTATAAGATGAAACTAAACAAAACCCTATGTATATACAGCAAATGAATGTCTCCAGAATTCATAATGGATTCAAAAGATAATCGTATGTATATACAGACAAGCAGTAGTATCATGAATGAATAGCCATATATGATGAAATTGTGGGAGCATGTTGTAGTAATAGCCTCACATTATACAGCAACCATAAATAAAATATCAAAAGCCAAACTCCAATATCAATACGCAATGTTTTAGAAGCACTGAATACTAATTGCACAATACAAAAATTAATCATGCACGAGGCATGTTTAATGTGAAGTAATCAGTATGGCACTAAAGCAAAAAACTGCAGTGACGGATACTCCTAAATATAGATATAAGAGGTGCCTTAAAATTATTTTGTGCAATAGTAAGCATGGATCTGACCTAACATCTTGCACAATTTCATAAAAAAATTGAACTAAGCTTGCAGAAAAGGCAAAAAAAAAAACATAATAGTCTAAAGGCACACTACCCATGATGCAGAACTATCAAGTCGCTTTAATAGTTTGACAACTGCAGCGCTGAAAGCTCAATGAGAAATGTCACTCCGAAGCAGCAGCAGAAAAAGAATGCTAAAGAGTTTATATATAAAAGCAAAGGCCTAATCAAAGTGCAAAGCTAGTCCATTTTTATCTGCTCGCTGACCAAATATCCTGCACTATATAATATATATATTTTTTTGTTTCAAAAGGGAAAAGATGTCTTGCAAGCAACTGTGCCACTCTCCTACTCTCCTAGCCATCATATGAACTCCATACATGTGTATGTTTTCCATCCTGCAAATCACTGGGTGTTTATTTAGATTTCAGTTTAATCTGTATAAAAGCGAGGACAGGTGAGAAGCAAAACTTTTGCTTTGAGGTCGCTGTGCACAGATTGATTAGTTGTATTTTTTTTACCAGAGAGAACCAATACTTAATAATAGAGGTTATACCTTTAAAACTTCATATGGCTAGCTTACCTTAAAAATAATTACTAACTTTTCTGAAAAAAAAAATCAGAGATAATGTGCAGAGCTGAATGAGAAATGTCACTCCGAAGCAGCAGTACAAAAAGAATGCTAAAAAGAGTTTATATATAAAAGCAAAGGCCTAATCAAAGTGCAGAGCTAGTCCATTTTTATTTGCTCGCTGACCAAATATCTTGCACTATATAAAATATTTTTTTTTTTGTTTCAAAAGGGAAAAGATGTCTTGCAAGCAACTGTGCCACTCTCCCACTCTCCTAGCCGTCACATAAACTCCATACATGTGTATGTTTTCCATCCTGCAAATCACTGGGTGTTTATTTAGATTTCAATTTAATCTGTATAAAAGCGAGGACAGGTGAGAAGCAAAACTTTTCCTTTGAGGTCGCAGTGCGCAGATTGATTAGTTGTATTTTTTTTTACCAGAGAGAACCAATGCTTAATAATAGAGGTTATACCTTTAAAACTTCATATGGCTAGCTTACCTTAAAAATAATTACTAACTTCTCCGAAAAAAAATCAGAGATAATGTGCAGAAGTTGTGCAGCCATGTAGGATTAAAACGTCAAATGCACATTTTACAAACTATCGAATGACAGTTTTAATCTTACTTTGGATAAAGGGAGGTAGAGCTAGAAGCATGAAACGTTGTGAACAACATTTAGAAAGCAGGACAAGCGAGATGTGAATAGCAAATATATTAGATGGAAAGAGGAAGTTTCACAATAATAGCTCTAAAGCAAGAAAAGATGAGTTCAGGGACAACAAAGCAAAAACCTAGCCGACTTTGATAAGAACTAAAGATGAGGTGGAGGGAAGCAACATCGTTATGGGCAGCAAGGGACAAAATATCAGGAAAGAGAAAGAGAGTACTATGCGAGAAGTGTGTGCACAAGAACCTATGCAACGGCTACAAAAGGCACTGCAGTGACCGTTATATGGCTGCAATAACATAGGAAACCGACAACACGCATGTACCAAGTGATAAGTGTCAGAAATAAGCTATTAATATAGCGACAAACAAAGCACCATAAATGCACAATATTGAAAAGAAGCAGAAAATAGTGCAAAATAGTAATCAATAAACAGAAAAGGAAATACTGAAATAGGGTATGAGAGAGATGGAAATACCTTATACGAAACAGCACCCAATGTGTTGACAACGCAGCAGAAGCAATGTAACCAAGAAGATGCCACGCAAGAAAGATACCCACAGAAGACAAAGGCCTTGACCGAGAAATAGAAGAAAGGGTAGAAAGGGACGGTCACCAATAAAGGTGACCAGAGCTGCGCAACAGAAAAAGATTGTTAGCAAACATAAACCTGAAACAGAAGGCACCACAAATACAGGGGATATTTCCATATCGTTTAAAGCATATATATACAGTAGAAAGAACCTAACCTGCTTGATTGAACCAGCAGCCCGAACATTCCTTGGCAAAATCAATCAAGAACCCTTGAAGCACCGCTTCAGCCCGTGCAAATCCGGCCCTCTACAAATCAAGCCAGAAATCAAAGAATGATTAGAAGGCCTAAAAACAGGAAAAGCGACATCGAATAGCGCTGACAACCAAACTACAATGTCGCCTACATCTTACCGTGCCATATTCAATGATCAAAAGCAACAACAAATAGATGTATCAAGTAGTACACGTGAGGACGCAAGCAGCAAAAGAGCGATGAAAACGATAGAGCGATGAAAACGATGGTGCAACTTTGAAAGGGAAGCGGAGAAAAGAAGATGGCTCCCGGCATCTGCAAAGGAATATATAATAGAGAAGAAGGCATAGACTTGTGCATCACATCTAATAGGACCAACCATACCCACCAATAGGGAAGCAGCATACATGGACCCCATGGCATTCAACCCCACCTGAAAGTGGAATAGCCTAATACATCTCGCGTAACGAAGGAAACACCCTGGACTATACACCATGAGAGGCCTCGCTAATACTACATCGGATAAGGCCCCACAATACAGCCAGGAGGAGTATATAGACCAGGTTCACCAATAGGCACCGATGCAACCGAGAAAAATTGAGCCAATCACAGCAAGCAGCTTGCCCCATCCCAAGCTGACAACCGCACTCCCCAAGCTGACAACCCTGAGCAAGCATGCACAGTTGTGCCTCATTACATAGGCATATTCCATGGTAGGTATGAAACCAACCCTAACCATATGGCCTACACGCCAGCGGCACCAAAGCCATAGACCAATTGCATCGATAATGCATTGCCCACCGTCAAACACAACGAAAATTCACAAACGCAACTGGACGACACCGCACAAACTATGACGAACAAAGGCCACACGATCTAGATCAAACGGATAGGGTGGCAAGCAACCACAAAGCCCCAAACTGACCAGGATTGCAGCCGTGGGTCGTGGCCAATGTGCGAGGACTCAGCAGCATCCACGCCGGCGGCAAACATCAACGCTTTGACCTCCTCCATCGCCGCCGAGCTGCTACTGCCGCCACCACCGAGCTCAGCATACCCGATAGCCCTGGATGTGCCACATCGAACTTCCCCATCAGTTTGGATCTGGATTAAACAGAGAGAGGGAAAGTGTGAAGAAAGAAAGGGTGGGTGAGCTGGCCCTTTCCCTGTGGAACTCACCACTGCGGAAGAACGGCCGGCGTCGACACCATTGATGAGCCTCTGCGCTAGCGCTCGCCCTCCACTCTGAGTGACCGGATCCGCCGGAAAGGAAATCGTGGCTGCCGCATCCAGCACCCACGGCCTCCCTTTCGAGTGGGCGTCGGCGGCGGCGTAGCAACGAGACCGCCAGCAGCGAGGGCGCAGCGATGACACCGTGCATCCACAACATCCCCTTGGAGCAGCGAATGGCAGGGCGCGTAGGGAGGAGTGCGAGCGGCGGCCACGGCGCTCCGAGGACAGCGGGCGGCGGCCACCGCGCTGGCAGATCCAGGCGGCGGGCAGGAGAGAGCGAGAGAGATGAGAGCGGCGTGGCGGCGGTGGTTTTTTCTTTTTTTTTCTTTCACGCGG
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| CDS seq | ATGGCGTACGTGCTTATTTCAGACCTTATGTATGGGGACACTGATAAACGGATCAAAGCGAGGGTATCTAGGCAATGGGACTACCATGATCTGAATGATGAAACAAAGATCTACCACACTGATCTTGTCTTGCTGGATGAAAAGGGCAATAGCATCCATGTTCAAATCTATCCACCTGCCATGATTAAGCTTAGGACTCTTCTACAGGAAGGGAAGGTTTACTACTTTGACTCCTTCTCTGTCAGATATGCAAACAGAACATATAGGCCAGTTACGAACCCTTTGATGATCTCATTCACTAAATGGACAACCTTAGAAGAATGCATTGATGCTTTTGATGATTTTCCTGCCATAACTTTTTCATTGACACCTTTTCAAGACGCCCCGTCTCTTGTGGACAGAAATGCTTTCTATGTTGATATTATGGGTGTCATAACTGAAATTGGTGCAACAGACACTCTACGCCCAAAATCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGA
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| Protein seq | MAYVLISDLMYGDTDKRIKARVSRQWDYHDLNDETKIYHTDLVLLDEKGNSIHVQIYPPAMIKLRTLLQEGKVYYFDSFSVRYANRTYRPVTNPLMISFTKWTTLEECIDAFDDFPAITFSLTPFQDAPSLVDRNAFYVDIMGVITEIGATDTLRPKSRNTETLKRTMQIWDASNVRQASEHNFH |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0390300 | OsNip_01t0390300-02 | Chr01 | 16468660 | 16478533 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGTACGTGCTTATTTCAGACCTTATGTATGGGGACACTGATAAACGGATCAAAGCGAGGGTATCTAGGCAATGGGACTACCATGATCTGAATGATGAAACAAAGATCTACCACACTGATCTTGTCTTGCTGGATGAAAAGGGCAATAGCATCCATGTTCAAATCTATCCACCTGCCATGATTAAGCTTAGGACTCTTCTACAGGAAGGGAAGGTTTACTACTTTGACTCCTTCTCTGTCAGATATGCAAACAGAACATATAGGCCAGTTACGAACCCTTTGATGATCTCATTCACTAAATGGACAACCTTAGAAGAATGCATTGATGCTTTTGATGATTTTCCTGCCATAACTTTTTCATTGACACCTTTTCAAGACGCCCCGTCTCTTGTGGACAGAAATGCTTTCTATGTTGATATTATGGGTGTCATAACTGAAATTGGTGCAACAGACACTCTACGCCCAAAATCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGA
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| Protein seq | MAYVLISDLMYGDTDKRIKARVSRQWDYHDLNDETKIYHTDLVLLDEKGNSIHVQIYPPAMIKLRTLLQEGKVYYFDSFSVRYANRTYRPVTNPLMISFTKWTTLEECIDAFDDFPAITFSLTPFQDAPSLVDRNAFYVDIMGVITEIGATDTLRPKSRNTETLKRTMQIWDASNVRQASEHNFH |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0390300 | OsNip_01t0390300-01 | Chr01 | 16468782 | 16479809 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGTACGTGCTTATTTCAGACCTTATGTATGGGGACACTGATAAACGGATCAAAGCGAGGGTATCTAGGCAATGGGACTACCATGATCTGAATGATGAAACAAAGATCTACCACACTGATCTTGTCTTGCTGGATGAAAAGGGCAATAGCATCCATGTTCAAATCTATCCACCTGCCATGATTAAGCTTAGGACTCTTCTACAGGAAGGGAAGGTTTACTACTTTGACTCCTTCTCTGTCAGATATGCAAACAGAACATATAGGCCAGTTACGAACCCTTTGATGATCTCATTCACTAAATGGACAACCTTAGAAGAATGCATTGATGCTTTTGATGATTTTCCTGCCATAACTTTTTCATTGACACCTTTTCAAGACGCCCCGTCTCTTGTGGACAGAAATGCTTTCTATGTTGATATTATGGGTGTCATAACTGAAATTGGTGCAACAGACACTCTACGCCCAAAATCAAGAAACACAGAAACTTTGAAAAGAACAATGCAGATTTGGGATGCAAGCAATGTCAGGCAAGCATCCGAGCACAATTTTCACTGA
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| Protein seq | MAYVLISDLMYGDTDKRIKARVSRQWDYHDLNDETKIYHTDLVLLDEKGNSIHVQIYPPAMIKLRTLLQEGKVYYFDSFSVRYANRTYRPVTNPLMISFTKWTTLEECIDAFDDFPAITFSLTPFQDAPSLVDRNAFYVDIMGVITEIGATDTLRPKSRNTETLKRTMQIWDASNVRQASEHNFH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.377134 | 1.532203 | 1.219181 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g29390 | RBH | 1.497242 | 0.959288 | 0.243077 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0390300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0017980 | RBH | 0.570439 | 7.315008 | 6.448701 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0008510 | SBH | 1.676330 | 6.431366 | 11.350247 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0008891 | SBH | 1.944198 | 0.000000 | 9.912401 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0038940 | SBH | 0.289196 | 0.053614 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0002580 | SBH | 1.277327 | 0.950951 | 0.636145 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0278200 | SBH | 3.3970695 | 7.099484 | 14.8446035 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0276100 | RBH | 0.312029 | 0.308567 | 0.2479375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0002560 | SBH | 0.075790 | 0.585201 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0002590 | SBH | 0.000000 | 0.000000 | 0.017706 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0010110 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G008510 | RBH | 1.035707 | 0.489945 | 5.344918 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0008371 | RBH | 9.490953 | 35.493488 | 11.785679 |
