Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0001760 | OGI:01004680 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:1357424-1363326 | ||||||||
| Gene Symbol | RBBI3-3, RBBI3-3, OsBBPI, BBPI | ||||||||||
| DNA seq | tcacaaggggcccgggtcggcgccccagtagacgtcctcgcagatgagcggccccgggaacggccccggcgcctccctgcacgacttgcacgcggcggtgcacttgccgggctccagctcgtcgtcgcagcgccagaacggcgggaagatcctctgcggcagctgcacgatgttgtcgcagcacttccacggcctcttcgtcgtcggctgatccggcgccgtgcacatctggcccgggtccaccgtcgagtaccagtcgctgcacacgaaggcgccgcgggggaagtcgccgggcgcctccacgcactccttgcaggcggcggagcactgcttcacctcgtcgttgcagcggtacagcggcgggaagatctttagcggggacatctcgatgttgtcgcagcagtcccagggtttggcgggctgcggtggtgcgtcgccttcgctggggagacggatggtggtgtcgccgttgccgtgggcggcggcgaggccggcgaggaggaagagaaggatggtggaagtagccatggtggtgttgctcatctttggttggtgtgggtgcttgtggtgttgctcaacatagtttttccaaataacctgttcctatttgtaatctttatgtatttaaaacttaaataaagagacaaactaaatgttttattagaactcaaggagtcatttagatactcattagttgcatgcttgcatttattctttgattttgtaacatccaaggtgatttaatttcttattggtcttgatgtaaaaagtaatatgtgtaacttttgtggatggagggagTatatcacttcacaaacatgcaagttcaaattcgacttctactaattgtaacaaaaataacaaatttgactctgaatatatgtataTactagttagactttaatttgttgtttttgttataacttgtagaagtcgaatttgatcttgcatgtttgttaagtgATatattatAtattaatctatgttgtaaagtttttttgaaaTtttttaataattatttagttaacatgcaagaaactggtagacgtctacctgagagattagaatccatcttcgcgcgcgttacgtataaatctttcgtgtaatggaaggagagagagaaaaaaaaagaaagtacgtatccctttcacatactgtgcaagcatatgttcatacctgtgcaagcatatgtgttccggtacgtgagatatgagaggaggatggttcaacgtacgttagaagtaagaggatatgctgATatatatgcatggatgtatgcaggaataggggtgggcgttcgtgtcagggttacggatcaggcataccctctaccattcgatatacgttacatatcgatatggcatacccacacgcacgcggatgttttctacatatcctaaggaaacctttcacgaaatctatagatgggaagagtccttctcggatagaactgggtcgtcgacgtatcgtattgggtctgatatctccgagtcctacttggagacctccagatctgtgatataacagggaccccccggggagggcatagatcatcgaatcttagaaccaacacaacccacacagcctacaaagctgaggtctgcgatgagccaagtcatcgagagctagtcgaatccactcgactacgatctcgccggatccgacaagttccatcgttccctttgtaacctgtgttttccaccatataatcccatatcaactggattagggctattacctaccaaggggcctgaaccagtataattcttatcttttgattgttcgatgttgtactacgtagatccttgtaccaacgtaccctaataccctctatatccggtctacgggtatcacccgtcgacagttcggtccgaccaaaaaattcgatctcgttcttcgatttttcggtcagttcggtctttacaaactcaggaccgaattttatccaaaaaaaactcaggaccggcaaattcggtctcggtctcggtctgaccgaaatttttgtggagaaaatttggaacgaaaaattttgacagaggcatcgctggcgcggtggagggcggaggcgtcggccgcggcatggtggaggacggcgttgtcggccacggcgcggtggaggacggcggcgtcgaacgcggcgcggtggaggacagcggcggccgccacgcggtggaggcggaggcggcggcggtgacgcggtgcaggctggaggaggaggcggcgctgtgcggcagtggtggtagggtttgtttagtgggcttattgggcttcctaggcctattgggcgaaaattcggtcatttcggttaattcggttaactgatcccaataaccgaaatgaccgaaataaattcggtcttttgagggctgagaccgaacagataaccgaatttttcagtctcggtctcggtcttttcggttcggtttttcggttcggtctaaatatgctcacccctatgcaggaataatacaggatagagtttaattagagtataTtttgttgggttgttggatcattgttcattcattcatttgtagtaccattatcattttgggtactgtcatatcgccatattcactagtaaaacaaaacgactgttaaaaataaaaattaatttataaATaaaattttactccatccgtcctaaaagaagacaaaacctgggttttcgtgtccaacgtttgactatctgtcttatatgaaattttttataattagtaTttttattgttgttaaatgataaaacatgattaatactttatacgtgacttgtcttttaattttttttcataattttttcaaataagacatacggtcaaacattaaacacgaaaaccatggtttgtttatttttatggagggagtacatatacttttaacgactttatgttAaaaaaaaactacatcaaaactaattttaaaatttaataatttatttttagctaaggctattataatgataaccgattgatgggactatccatttagctcggtttgctcgatcgttctggagtgacatgcatgcatgggttgccatgctaatcatggagcaatttctaatttccaccacgtgatcggtgatggtgaccgtcgcattaatttagatgtacgtcgtccacattattgtaactatagtactaattaactgagactgcggtgacacgtagtgcgtcggaatctgatctctgtaccaactcttctctccgcatcgcatcgcgtctgcacatgcgcacgtggtgcatgtacggtctggtcgacgagcacaagcacgtgctacacgcatgctcagcggcccagcgagttgagagaggcctggttgctggtttcctttcctggaccagtagctgaatcaagcttggaagcctggaccagtaaaatgggacactagcagctgtctgcgacacacgctgctctcctctctctctctcTctctctctctctctCTctctctctctctctctctcTctcctctctctctctcacatgaaaTtttgacaaattaatccttctaaaatctaatttcaagaatgaactttgtaaaaaaaacatctttacctcgataccatagagattggcataacacctcggcgccgtcttcTttttgcaccaagaaaattaccgaggtgataaaattaaattcaaactcagcaagggatcaataccaatatcgttgatgttgaccccatatcCGcctgctaatggactgagatccacaccaaaaccgCccccagaccacttgtctctacacagtacacttctAaaccaatccattctaattcatagcttgcagaaaacaaaccaatccaatccactcacagagcacccaaaccaatccaaaccaagtgtagaaaaatggattcaacccattcccaacccaaaggaaatccacaatactcgtccttcctccttcactagttcagagataagcaacttagtcagacataccctgaacAacaagcttAaaagattcgtttcgcaatttacacgcaatttgtgtaattagtttttattcgtatatttaatatttTATGtatgtgtccaaacatttgatgtgacatggtgAaaaaatttgccaggtaatctaaactaggccttatttatgatattgggacaactcaacatgggtacatatgcatgcttgcatagtatacatattttatttttttctcttggtctcaagcgaacagagacaaatacaccagccactgcacaaacacatggaccaaacaactaaaaatttcgtacgccaccctcccccccccccccccaacccatattatttcagccgaaatttttactttaaaataaattttgtaatgtttggtaatatttttttttcaaatttgataaacatttgttcataattttggactgaaatttcggtatatcggtaacctccgatagaatcggccaaaccgaaaaattaaaccctagtgctaaatgtttctcatgcgatggagttcgaactgaatagcttgctatgtactactttcacttcacattataagatatttgatctctctatcgttcattTAtattcactaacattcataTGaattctgagacAtataatgaatccatacataaatgtattgaaaacccacaacatcttctaacgtgaaacagaggaattaataatcattcaatcaacatatgaggcccgtgctaaatgagatattgtgtttattattattaaTttttaacctgtttcttaattctcagtatataacttatctttcaatttattagactggtacccatgtgacaggatcacgtttctgatcatttTAtatgtcgagtagataaatatcgctcgttcatctcttatttatgatgagacaactcaacatgggtacatatccacgcttgcattgcatatttattttatttttcctcatggtccacacaagcgaacagagacaaagacacccacacacatggagcaaacaaactaacaaagcatgcaagatgcacaaaagctgcagagcactgaaaaatctggatggagctaagctctagcctctagctataccaactctgaatgatcgaacgaacgatcagctagctgcaagctagggcgagttttattgatggacacacagatcgatcatcgatcatctgtagctagctagttctccgctcggggtttgcacacggggccgggatggccggtgaagcggtccttgcagacgtagcgaggcggctccgacgactccacgcgctggcaatccttgcacgcgtcggcgcactccttcacctcgtccatgcagcggcaggtcggcgggttcatcttgttgcagaaggccttgtcgcagcaatctCcccatggccgcggcgtgcagaaggggcccgggtcggctccccagtagatgtcctcgcagatgagcttccccgggaatggccccggcgcctcccggcacgacttgcacgcggcggtgcactggctgggctccagctcgtcgttgcagcgccactgcggcgggtcgggcttcgtcggcagccgcttgatgttgtcgcagcacttccacggcctctccatcgacggcccatccagcgccgccgtgcacttggggccggggtccaccgtcgagaaccagtcactgcagacgaaggcgccgccgggcgcctccacgcactcgttgcaggcggcggcgcactgcttcacctcgtcgttgcagcggtacagtggcgggtagatcattagcggggagatctcgatgttgtcGCAgcagtcccatggtttggcggggcgtggtcgtgatgctttggcgccgtcgctggggagacggatggtggtgtcgccgtcgccgtgggcggcggcgaggccggcgaggaggAagagcaggatggtggaagtagccatggtagtgttgctcatcttggttgtactggggggtgtgggt
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| CDS seq | atgagcaacactaccatggctacttccaccatcctgctctTcctcctcgccggcctcgccgccgcccacggcgacggcgacaccaccatccgtctccccagcgacggcgccaaagcatcacgaccacgccccgccaaaccatgggactgcTGCgacaacatcgagatctccccgctaatgatctacccgccactgtaccgctgcaacgacgaggtgaagcagtgcgccgccgcctgcaacgagtgcgtggaggcgcccggcggcgccttcgtctgcagtgactggttctcgacggtggaccccggccccaagtgcacggcggcgctggatgggccgtcgatggagaggccgtggaagtgctgcgacaacatcaagcggctgccgacgaagcccgacccgccgcagtggcgctgcaacgacgagctggagcccagccagtgcaccgccgcgtgcaagtcgtgccgggaggcgccggggccattcccggggaagctcatctgcgaggacatctactggggagccgacccgggccccttctgcacgccgcggccatgggGagattgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgaggtgaaggagtgcgccgacgcgtgcaaggattgccagcgcgtggagtcgtcggagccgcctcgctacgtctgcaaggaccgcttcaccggccatcccggccccgtcgaaggcgacgcaccaccgcagcccgccaaaccctgggactgctgcgacaacatcgagatgtccccgctaaagatcttcccgccgctgtaccgctgcaacgacgaggtgaagcagtgctccgccgcctgcaaggagtgcgtggaggcgcccggcgacttcccccgcggcgccttcgtgtgcagcgactggtactcgacggtggacccgggccagatgtgcacggcgccggatcagccgacgacgaagaggccgtggaagtgctgcgacaacatcgtgcagctgccgcagaggatcttcccgccgttctggcgctgcgacgacgagctggagcccggcaagtgcaccgccgcgtgcaagtcgtgcagggaggcgccggggccgttcccggggccgctcatctgcgaggacgtctactggggcgccgacccgggccccttgtga
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| Protein seq | MSNTTMATSTILLFLLAGLAAAHGDGDTTIRLPSDGAKASRPRPAKPWDCCDNIEISPLMIYPPLYRCNDEVKQCAAACNECVEAPGGAFVCSDWFSTVDPGPKCTAALDGPSMERPWKCCDNIKRLPTKPDPPQWRCNDELEPSQCTAACKSCREAPGPFPGKLICEDIYWGADPGPFCTPRPWGDCCDKAFCNKMNPPTCRCMDEVKECADACKDCQRVESSEPPRYVCKDRFTGHPGPVEGDAPPQPAKPWDCCDNIEMSPLKIFPPLYRCNDEVKQCSAACKECVEAPGDFPRGAFVCSDWYSTVDPGQMCTAPDQPTTKRPWKCCDNIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGPL |
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| Function | Bowman-Birk type bran trypsin inhibitor [UniProtKB/Swiss-Prot:Q0JR25] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0001760 | OsNaBo_01g0001760.01 | Chr01 | 1357424 | 1363301 | - | NAM | ||
| CDS seq | atgagcaacactaccatggctacttccaccatcctgctctTcctcctcgccggcctcgccgccgcccacggcgacggcgacaccaccatccgtctccccagcgacggcgccaaagcatcacgaccacgccccgccaaaccatgggactgcTGCgacaacatcgagatctccccgctaatgatctacccgccactgtaccgctgcaacgacgaggtgaagcagtgcgccgccgcctgcaacgagtgcgtggaggcgcccggcggcgccttcgtctgcagtgactggttctcgacggtggaccccggccccaagtgcacggcggcgctggatgggccgtcgatggagaggccgtggaagtgctgcgacaacatcaagcggctgccgacgaagcccgacccgccgcagtggcgctgcaacgacgagctggagcccagccagtgcaccgccgcgtgcaagtcgtgccgggaggcgccggggccattcccggggaagctcatctgcgaggacatctactggggagccgacccgggccccttctgcacgccgcggccatgggGagattgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgaggtgaaggagtgcgccgacgcgtgcaaggattgccagcgcgtggagtcgtcggagccgcctcgctacgtctgcaaggaccgcttcaccggccatcccggccccgtcgaaggcgacgcaccaccgcagcccgccaaaccctgggactgctgcgacaacatcgagatgtccccgctaaagatcttcccgccgctgtaccgctgcaacgacgaggtgaagcagtgctccgccgcctgcaaggagtgcgtggaggcgcccggcgacttcccccgcggcgccttcgtgtgcagcgactggtactcgacggtggacccgggccagatgtgcacggcgccggatcagccgacgacgaagaggccgtggaagtgctgcgacaacatcgtgcagctgccgcagaggatcttcccgccgttctggcgctgcgacgacgagctggagcccggcaagtgcaccgccgcgtgcaagtcgtgcagggaggcgccggggccgttcccggggccgctcatctgcgaggacgtctactggggcgccgacccgggccccttgtga
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| Protein seq | MSNTTMATSTILLFLLAGLAAAHGDGDTTIRLPSDGAKASRPRPAKPWDCCDNIEISPLMIYPPLYRCNDEVKQCAAACNECVEAPGGAFVCSDWFSTVDPGPKCTAALDGPSMERPWKCCDNIKRLPTKPDPPQWRCNDELEPSQCTAACKSCREAPGPFPGKLICEDIYWGADPGPFCTPRPWGDCCDKAFCNKMNPPTCRCMDEVKECADACKDCQRVESSEPPRYVCKDRFTGHPGPVEGDAPPQPAKPWDCCDNIEMSPLKIFPPLYRCNDEVKQCSAACKECVEAPGDFPRGAFVCSDWYSTVDPGQMCTAPDQPTTKRPWKCCDNIVQLPQRIFPPFWRCDDELEPGKCTAACKSCREAPGPFPGPLICEDVYWGADPGPL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0001760 | OsNaBo_01g0001760.02 | Chr01 | 1362415 | 1363326 | - | IsoSeq | ||
| CDS seq | acccacaccccccagtacaaccaagatgagcaacactaccatggctacttccaccatcctgctctTcctcctcgccggcctcgccgccgcccacggcgacggcgacaccaccatccgtctccccagcgacggcgccaaagcatcacgaccacgccccgccaaaccatgggactgcTGCgacaacatcgagatctccccgctaatgatctacccgccactgtaccgctgcaacgacgaggtgaagcagtgcgccgccgcctgcaacgagtgcgtggaggcgcccggcggcgccttcgtctg
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| Protein seq | THTPQYNQDEQHYHGYFHHPALPPRRPRRRPRRRRHHHPSPQRRRQSITTTPRQTMGLLRQHRDLPANDLPATVPLQRRGEAVRRRLQRVRGGARRRLRL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 75.982666 | 12.422457 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0124200 | RBH | 6.092817 | 4.912501 | 9.019593 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g03360 | RBH | 0.210794 | 0.214210 | 0.982963 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0124200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001800 | RBH | 0.081395 | 20.215199 | 11.167740 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001680 | RBH | 0.523617 | 46.362495 | 2.390316 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001800 | SBH | 0.090220 | 57.100716 | 3.542181 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001710 | SBH | 1.671868 | 8.429025 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001800 | RBH | 0.897031 | 236.255600 | 7.130720 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0022500 | SBH | 12.2048265 | 23.5406925 | 17.7103855 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001730 | RBH | 0.0 | 4.754098 | 1.083678 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0022300 | SBH | 149.9181935 | 824.458923 | 5.728838 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001610 | RBH | 0.510125 | 3.134546 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001810 | RBH | 0.0 | 7.976311 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001840 | SBH | 1.380279 | 212.897156 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001800 | SBH | 0.000000 | 4.055514 | 2.494042 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001700 | SBH | 0.0 | 63.129677 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001870 | RBH | 0.0 | 52.479660 | 2.426065 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001750 | RBH | 76.036285 | 32.512402 | 3.995320 |
