Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G019630 | OGI:11063750 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:25035330-25041103 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CGGAAATTAAACGAGCCGGATCAACGATGGACCTCGTCGTCGGCGCGTCGAGCGAAGCCGTGAAGTCACTCACCGGAAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGATCGCCAGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTGGCCTACGACATCGAGGACTGCGTCGACGATGTCGGTTACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGAGCGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCCAGGGCAATAATGGTGGTGGCGACAGCGGCCTTGGCGTCGGAGCTAACGCTCCTAGAGACCGTCTAGTTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGACATTAGTGAGCTCCAGAAGTGGTTTTCCAACGGGAAGGATGGCAACCAGCAGCTGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCAATGGCGTTGTACCGCGAGCTTGGAGACGAATTTGATTGCCGAGCATTCGTGCTCGCGTCGCAGAAGTTCCATCTCCCAACGGTTCTGAGAAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGATGCTCCTGAGGACGCCCTCCATGGAATTGAGGGGTGGGGAGATGAAATGCTCAAGAGGAAGCTCCTTGAACAATTAAAAAGCAAGAGGTAGGATCTTGGCCTTGCTATTTATCTTTCTGTTCCAACTATGTTTATCAGCGCTGCTATACATACGATATTTTTTTACGATTGTTGTACGATAAAACGTTTCTCTCGTAATGAACATTAATGGCTGGAAGGTATGGATCCACACGGAAAAAGATTACTCTCACACCATAAGCCCATGTTCAAGGTCCAAACTCATCATGTATTTGTCCTGCCATCTCGTAAGCATTCTGACACCGCGAACCTAAACAATTTTCTTCCTAACCAATCTATACTTCATACCTCTCCGGTTCCATAATTATTAACGTTTTATAATAATATGATCTTTAAAATATATCTTTGACCCCTGCCGTATCTTTAAACACAGTACGGCAGGGGTCAAAGATATATTTTAAAGATCATGTTATTATTTAAAACATTAATAATTATGGAACCGGAGAGGGTATGAAGTATAGATTGGTTAGGAAGAAAATTACCTTGGTTCACGGTGTCAGAATGCTTACGAGATAGGGTGGGAGAGTAATCTTTTTTCCATATGGGTCCATACCTTCTAACCATTAATGTTCCTTACGAGAGAAGTGTCATATCGTACAACAATCATAAAAAAAAATCGTACGTATATCAGCGTTGCTCCTGACCCCTGCCGTACTTCTGTGTTTGTTGTAAAAAATCGTATATCTAGCACTTTCCCTATGTTTATTGTGTTGGACTGTACTAGGCCAGTACCCCCTTCATTCCATGTTATGTCATTACTTTTTTCTTAGTCAAACTTCTTAAAGTTTGATCAAATTTGTAGCAAAATATATTCAATCCTAATCTTAATGAAACTACTCTGGTGCCATAAGTATTGCTAATTTTTTCTATAAACTTGGTCAGACTTATAAAACTTTAACTAACAAAAAGGTTAAATGACTTATAAAATAAAATGGAGGGAGTTGTAACTAGTATACATCAACTGTGCATCCGCACATGCTACACGTATGATTTTGTATTTCTTTATATTATCGTGAGAATTTCTACCTTTTCTGATTAATATGGTAATTTCTAAATTATGTACTCCCTCTGTCCTAAAATATAAGGGATTTTGGACGGATGAGACACTTTCTAGTACTACGAATATAGACCGAGAGCCTGTCCAGATTCGTAGTATTACAAAATATTCCATCCGTCCAAAATACCTTATATTTTAGGACGGAGGGAGTAGTATCTTTTAGAATTAATGCGGAGGGTTCTAGGGAAGCCCCTTGATTAGTATACATAAAGTTTGATAAATCTCAGCAATATCTTTGACATATGGATGCATATGATTTTATCTTTTTTTTAGATTAACACGTAGGAATTTTTAGCTTTTCTAATCAATATGGGAATATCCAGATCTTTTTGTCTTTTTAGGATTAATGTACAGCTTGTAGGGAAGCCTCCAATTAGTTTATATAAAGATTTACAAAATCTAGTAACATTATAAAATATAAGAAAAATATTAATACTCCGAATTGGAAAAGTGACTATATATTTGTGTCTTGAATGAGCACTATAAACCATTATTGACAACTATACTTCTAAACATTGTTTGAAGCAGGTTCCATATCTTGATAGATGACATATGGTCTGTATCAGCATGGGAAAATATCAGGGATTCATTGCCCAAGAATGACAAGGGTAGCTGTGTGGTGGTGACTACTAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAACGAGGGCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCCGCAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGCCCCAATAGACACATTAATGCTAGCATTATCATGAGGATATGTGGGGGTCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAAATGAAATCAAAGATTGATCTGACATTGGATGAGCATTTGGTTGATGTAGATAAGGCTTTAAGTGCAGAGTTGGGAAGCAATCTCACCACCGAAGGAGTAGCGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGTTTGCTGTACTTGAGCACATTTCCGAAGGGACGCAATATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAACCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTGTCAACAACAGCAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCACTGTTATTGGCGGCCACTGGCAGACACCATTTCCAAGCTACAAGGTACGGCGATTGTCTGTCCATAAAAGTGATCGGCAAGAAACAGAAATGGTAGAGAGGATGAAATTGTCTCATGTCCGATCCTTGACAGTACTGGAGAGTTTCAGTGCTCTTCATTCTACTATGCTCAAGTTCCAGATACTGCAGGTATTGGACCTTGATGGCTGCAAGGACTTGTCCCACCCACATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAATACCTGGGCCTGCGGCGGACAGATATTGACAAGATCCCGAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTTGACATTAGGGAGACAAATGTCAGAAAGTTGCCTACATCATTTGCGAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCGGACAGCATTGAAATTAACTGAGGAAATTACAAAGGTCGTAGCTCTACAAACACTTTCTGGGATTGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGGAGCAGTCACCAGATATGGCCATCAGAAACTCTACACCCACCAGAGCCGAGGAAAGAGACAACACGGCTTTGCATGGTCCCCATAAAGAAGATAGCAAAGCGGACTTTCCAAAACAGCTTCGTTCCCTTGAAGCTCTGGAGAAGCTCATCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCTAAAGACTATGAGTTACTTCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGACCGCTCACTGAGTTCATCGCAAGCACCACCAGAACACCTGTACACCCTTGAGCTTTCTGGCATGTTGTCTGAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGATACTTTGGCAGTTCTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGAAGACAATTATTCAAATGCTCTCAAAATAATGCATAAGAATACATTGGAGTCAGGAGGTACGATCTTTGTGCTGGATGAGGGATTTGAAAAGCTGAAGCTACTGCGTTTTGCGGCACCTGTGCTACCTTCTCTAAGCTTTCTAGAAGGGGCAATGCCGCAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTATGGTCTGGAAAACCTCTCAAAGCTGCACCAGGTATTTTTAACAGTCAGCAGCCAGGCACCTGAAGATACTAGGGCAAAGACATCTCAGATCAAACGACTGGCAAGCATGATTCAAAGGGCTAATAATTCCCCTAACCCCAGTGTGGTGATAGATGAGTACAAAGAACTAGCAAAACAGTGATGAGCAAAACAATGATGGATGATCTAGACATAATCTACAATTGCAATGTGCCATTGTATTATCGATGTGTTGTACCTACTCCATCAGTGGCGCCTTTTTCTTTTATGACTTTCTGATCTATTTACAAATTATTGTATTGTTCTTTTGTTGAGTTGTGGCATCTTTATTTCGTTTCATCTGTTGTACCCTTAAGTCTGTGCAAGTATAAAGACTTATCTTCAGCTTTCCTTAGAAAACTAATCAGTCAGAGGTGTTCACTGGTTCTAATAATTATCTTTCTAACTCAAGGTGCTATTTTTTTTATCTCTTACAAATTGCCTAGTATAATAAAAGAAAACTTTGTCTTTTGTCTTATTTCTTATCTACTTCAAAAACTAATCAGTATTGTAACAACTAATCTTGAATTCTTGGGCGAACGAATTATGATTGAGAATCAAGCACCTATCCTTTCCTCCCTTGTCGAGTATAAGAATCACACGGTGGCAGCAGCTCTGCAAGATTATGCTTGGGTGGCGACTGGCCAATATCAGAGGGGGGTTATCCTTGCAAGGTATTGCCGACTATTTCAAGATTTAGGATGTGGTCTGAGAGGTGGTGTTGGATCCCTATGCCAGGGTATTCTATCCTCTCCGTCAAATCAGTGTATTCGCTGCTCTGTGCTCGGTGAACAAAGTGCGCCTTGGGCAGAATTGTGCGGAAATCCAGGGTGCCAGCACGTTGTAAATTCTTCATGTTCCTCGTGATGCGAGGAGCTTGTCTTACTGCCGACAACTTGCAGCGTTGCAGGTGGCATTTGGCGAGCTTGTCACCTTTGCTGCTGCGATCTGGAAACCTGCTTGCCCATCTTCCACTGCTGCGCATGCACGGTGCAGGTCTGGGAGCGGGTGCACAGCCGCCTGGGCTTCATTTGCCCACAGCCTACACCGCATTTGCCTTCCTGGTGGCTCGCGGTCCGCAAGATGATCAACAAGCAGGAGAGGAGAACCTTCGATGCAGGTGTGATCCTGGTGACATGGCTTATCTGGAAGGAACACAATGCCCGTGTTTTTGAGGGGAAGGACACTATGGTGTTTGCTCTATGTGGAAGGTGGCTGGCCTATTTACACCGCCTGACACCGGGGCATATCAAGGCATTGAGGGTTCTGATGTGA
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| CDS seq | ATGGACCTCGTCGTCGGCGCGTCGAGCGAAGCCGTGAAGTCACTCACCGGAAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGATCGCCAGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTGGCCTACGACATCGAGGACTGCGTCGACGATGTCGGTTACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGAGCGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCCAGGGCAATAATGGTGGTGGCGACAGCGGCCTTGGCGTCGGAGCTAACGCTCCTAGAGACCGTCTAGTTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGACATTAGTGAGCTCCAGAAGTGGTTTTCCAACGGGAAGGATGGCAACCAGCAGCTGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCAATGGCGTTGTACCGCGAGCTTGGAGACGAATTTGATTGCCGAGCATTCGTGCTCGCGTCGCAGAAGTTCCATCTCCCAACGGTTCTGAGAAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGATGCTCCTGAGGACGCCCTCCATGGAATTGAGGGGTGGGGAGATGAAATGCTCAAGAGGAAGCTCCTTGAACAATTAAAAAGCAAGAGGTTCCATATCTTGATAGATGACATATGGTCTGTATCAGCATGGGAAAATATCAGGGATTCATTGCCCAAGAATGACAAGGGTAGCTGTGTGGTGGTGACTACTAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAACGAGGGCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCCGCAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGCCCCAATAGACACATTAATGCTAGCATTATCATGAGGATATGTGGGGGTCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGAGTAGCGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGTTTGCTGTACTTGAGCACATTTCCGAAGGGACGCAATATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAACCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTGTCAACAACAGCAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCACTGTTATTGGCGGCCACTGGCAGACACCATTTCCAAGCTACAAGGTATTGGACCTTGATGGCTGCAAGGACTTGTCCCACCCACATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAATACCTGGGCCTGCGGCGGACAGATATTGACAAGATCCCGAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTTGACATTAGGGAGACAAATGTCAGAAAGTTGCCTACATCATTTGCGAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCGGACAGCATTGAAATTAACTGAGGAAATTACAAAGGTCGTAGCTCTACAAACACTTTCTGGGATTGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGGAGCAGTCACCAGATATGGCCATCAGAAACTCTACACCCACCAGAGCCGAGGAAAGAGACAACACGGCTTTGCATGGTCCCCATAAAGAAGATAGCAAAGCGGACTTTCCAAAACAGCTTCGTTCCCTTGAAGCTCTGGAGAAGCTCATCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCTAAAGACTATGAGTTACTTCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGACCGCTCACTGAGTTCATCGCAAGCACCACCAGAACACCTGTACACCCTTGAGCTTTCTGGCATGTTGTCTGAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGATACTTTGGCAGTTCTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGAAGACAATTATTCAAATGCTCTCAAAATAATGCATAAGAATACATTGGAGTCAGGAGGTACGATCTTTGTGCTGGATGAGGGATTTGAAAAGCTGAAGCTACTGCGTTTTGCGGCACCTGTGCTACCTTCTCTAAGCTTTCTAGAAGGGGCAATGCCGCAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTATGGTCTGGAAAACCTCTCAAAGCTGCACCAGGTATTTTTAACAGTCAGCAGCCAGGCACCTGAAGATACTAGGGCAAAGACATCTCAGATCAAACGACTGGCAAGCATGATTCAAAGGGCTAATAATTCCCCTAACCCCAGTGTGAATCAAGCACCTATCCTTTCCTCCCTTGTCGAGTATAAGAATCACACGGTGGCAGCAGCTCTGCAAGATTATGCTTGGGTGGCGACTGGCCAATATCAGAGGGGGGTTATCCTTGCAAGGGTATTCTATCCTCTCCGTCAAATCAGTGTATTCGCTGCTCTGTGCTCGGTGAACAAAGTGCGCCTTGGGCAGAATTGTGCGGAAATCCAGGGTGCCAGCACGTTCGTTGCAGGTGGCATTTGGCGAGCTTGTCACCTTTGCTGCTGCGATCTGGAAACCTGCTTGCCCATCTTCCACTGCTGCGCATGCACGGTGCAGGTCTGGGAGCGGGTGCACAGCCGCCTGGGCTTCATTTGCCCACAGCCTACACCGCATTTGCCTTCCTGGTGGCTCGCGGTCCGCAAGATGATCAACAAGCAGGAGAGGAGAACCTTCGATGCAGGTGTGATCCTGGTGACATGGCTTATCTGGAAGGAACACAATGCCCGTGTTTTTGAGGGGAAGGACACTATGGTGTTTGCTCTATGTGGAAGGTGGCTGGCCTATTTACACCGCCTGACACCGGGGCATATCAAGGCATTGAGGGTTCTGATGTGA
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| Protein seq | MDLVVGASSEAVKSLTGKLGSLLAQEYTLIASVRDDIQYINDELASMQAFLSKLKRRDVDHDEQRQDWMKQVREVAYDIEDCVDDVGYRLGREPRGSGAAISFQRAWYLLTTLYQRRRIAAEIGNLKLRAQHVSERRTRYGVENLQGNNGGGDSGLGVGANAPRDRLVPLPRLIGTMEPVGMDADISELQKWFSNGKDGNQQLRYLAIVGFGGLGKTTLAMALYRELGDEFDCRAFVLASQKFHLPTVLRSLVKQFHEKQADAPEDALHGIEGWGDEMLKRKLLEQLKSKRFHILIDDIWSVSAWENIRDSLPKNDKGSCVVVTTRFNSVAEACRRQRGHVHKLKQLDPESSRNLFLQIISANDLCPNRHINASIIMRICGGLPLAIVVVAGLIARVAQIINHCYKNLPPDLKTCLLYLSTFPKGRNISRKHLIRRWIAEGFITEEHGKTAEEVAEDNLNELIGRNLIKPVNNSSNGKVKSCQIHDMVLQYIVSKSSDENFITVIGGHWQTPFPSYKVLDLDGCKDLSHPHQLKKICNMYQLKYLGLRRTDIDKIPKNIGRLEYLEVLDIRETNVRKLPTSFAKLQRMTHLLAGNKSKRTALKLTEEITKVVALQTLSGIEISGSSTLEEDREQSPDMAIRNSTPTRAEERDNTALHGPHKEDSKADFPKQLRSLEALEKLINLKKLAIYKLVKFQAKDYELLLSAIEHLSSCSLKFLAIDDSFTGFLDRSLSSSQAPPEHLYTLELSGMLSEVPGWIDRLHNLEKLTLSLTSLKTDTLAVLSSLPELFSLTFSLHAEDNYSNALKIMHKNTLESGGTIFVLDEGFEKLKLLRFAAPVLPSLSFLEGAMPQLQRLELRFRMVDYMYGLENLSKLHQVFLTVSSQAPEDTRAKTSQIKRLASMIQRANNSPNPSVNQAPILSSLVEYKNHTVAAALQDYAWVATGQYQRGVILARVFYPLRQISVFAALCSVNKVRLGQNCAEIQGASTFVAGGIWRACHLCCCDLETCLPIFHCCACTVQVWERVHSRLGFICPQPTPHLPSWWLAVRKMINKQERRTFDAGVILVTWLIWKEHNARVFEGKDTMVFALCGRWLAYLHRLTPGHIKALRVLM |
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| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G019630 | OsN22_11G019630_02 | Chr11 | 25035330 | 25040156 | + | NAM | ||
| CDS seq | ATGGACCTCGTCGTCGGCGCGTCGAGCGAAGCCGTGAAGTCACTCACCGGAAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGATCGCCAGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTGGCCTACGACATCGAGGACTGCGTCGACGATGTCGGTTACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGAGCGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCCAGGGCAATAATGGTGGTGGCGACAGCGGCCTTGGCGTCGGAGCTAACGCTCCTAGAGACCGTCTAGTTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGACATTAGTGAGCTCCAGAAGTGGTTTTCCAACGGGAAGGATGGCAACCAGCAGCTGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCAATGGCGTTGTACCGCGAGCTTGGAGACGAATTTGATTGCCGAGCATTCGTGCTCGCGTCGCAGAAGTTCCATCTCCCAACGGTTCTGAGAAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGATGCTCCTGAGGACGCCCTCCATGGAATTGAGGGGTGGGGAGATGAAATGCTCAAGAGGAAGCTCCTTGAACAATTAAAAAGCAAGAGGTTCCATATCTTGATAGATGACATATGGTCTGTATCAGCATGGGAAAATATCAGGGATTCATTGCCCAAGAATGACAAGGGTAGCTGTGTGGTGGTGACTACTAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAACGAGGGCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCCGCAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGCCCCAATAGACACATTAATGCTAGCATTATCATGAGGATATGTGGGGGTCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAAATGAAATCAAAGATTGATCTGACATTGGATGAGCATTTGGTTGATGTAGATAAGGCTTTAAGTGCAGAGTTGGGAAGCAATCTCACCACCGAAGGAGTAGCGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGTTTGCTGTACTTGAGCACATTTCCGAAGGGACGCAATATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAACCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTGTCAACAACAGCAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCACTGTTATTGGCGGCCACTGGCAGACACCATTTCCAAGCTACAAGGTACGGCGATTGTCTGTCCATAAAAGTGATCGGCAAGAAACAGAAATGGTAGAGAGGATGAAATTGTCTCATGTCCGATCCTTGACAGTACTGGAGAGTTTCAGTGCTCTTCATTCTACTATGCTCAAGTTCCAGATACTGCAGGTATTGGACCTTGATGGCTGCAAGGACTTGTCCCACCCACATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAATACCTGGGCCTGCGGCGGACAGATATTGACAAGATCCCGAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTTGACATTAGGGAGACAAATGTCAGAAAGTTGCCTACATCATTTGCGAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCGGACAGCATTGAAATTAACTGAGGAAATTACAAAGGTCGTAGCTCTACAAACACTTTCTGGGATTGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGGAGCAGTCACCAGATATGGCCATCAGAAACTCTACACCCACCAGAGCCGAGGAAAGAGACAACACGGCTTTGCATGGTCCCCATAAAGAAGATAGCAAAGCGGACTTTCCAAAACAGCTTCGTTCCCTTGAAGCTCTGGAGAAGCTCATCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCTAAAGACTATGAGTTACTTCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGACCGCTCACTGAGTTCATCGCAAGCACCACCAGAACACCTGTACACCCTTGAGCTTTCTGGCATGTTGTCTGAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGATACTTTGGCAGTTCTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGAAGACAATTATTCAAATGCTCTCAAAATAATGCATAAGAATACATTGGAGTCAGGAGGTACGATCTTTGTGCTGGATGAGGGATTTGAAAAGCTGAAGCTACTGCGTTTTGCGGCACCTGTGCTACCTTCTCTAAGCTTTCTAGAAGGGGCAATGCCGCAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTATGGTCTGGAAAACCTCTCAAAGCTGCACCAGGTATTTTTAACAGTCAGCAGCCAGGCACCTGAAGATACTAGGGCAAAGACATCTCAGATCAAACGACTGGCAAGCATGATTCAAAGGGCTAATAATTCCCCTAACCCCAGTGTGGTGATAGATGAGTACAAAGAACTAGCAAAACAGTGA
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| Protein seq | MDLVVGASSEAVKSLTGKLGSLLAQEYTLIASVRDDIQYINDELASMQAFLSKLKRRDVDHDEQRQDWMKQVREVAYDIEDCVDDVGYRLGREPRGSGAAISFQRAWYLLTTLYQRRRIAAEIGNLKLRAQHVSERRTRYGVENLQGNNGGGDSGLGVGANAPRDRLVPLPRLIGTMEPVGMDADISELQKWFSNGKDGNQQLRYLAIVGFGGLGKTTLAMALYRELGDEFDCRAFVLASQKFHLPTVLRSLVKQFHEKQADAPEDALHGIEGWGDEMLKRKLLEQLKSKRFHILIDDIWSVSAWENIRDSLPKNDKGSCVVVTTRFNSVAEACRRQRGHVHKLKQLDPESSRNLFLQIISANDLCPNRHINASIIMRICGGLPLAIVVVAGLIASKMKSKIDLTLDEHLVDVDKALSAELGSNLTTEGVAQIINHCYKNLPPDLKTCLLYLSTFPKGRNISRKHLIRRWIAEGFITEEHGKTAEEVAEDNLNELIGRNLIKPVNNSSNGKVKSCQIHDMVLQYIVSKSSDENFITVIGGHWQTPFPSYKVRRLSVHKSDRQETEMVERMKLSHVRSLTVLESFSALHSTMLKFQILQVLDLDGCKDLSHPHQLKKICNMYQLKYLGLRRTDIDKIPKNIGRLEYLEVLDIRETNVRKLPTSFAKLQRMTHLLAGNKSKRTALKLTEEITKVVALQTLSGIEISGSSTLEEDREQSPDMAIRNSTPTRAEERDNTALHGPHKEDSKADFPKQLRSLEALEKLINLKKLAIYKLVKFQAKDYELLLSAIEHLSSCSLKFLAIDDSFTGFLDRSLSSSQAPPEHLYTLELSGMLSEVPGWIDRLHNLEKLTLSLTSLKTDTLAVLSSLPELFSLTFSLHAEDNYSNALKIMHKNTLESGGTIFVLDEGFEKLKLLRFAAPVLPSLSFLEGAMPQLQRLELRFRMVDYMYGLENLSKLHQVFLTVSSQAPEDTRAKTSQIKRLASMIQRANNSPNPSVVIDEYKELAKQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G019630 | OsN22_11G019630_01 | Chr11 | 25035330 | 25041103 | + | NAM | ||
| CDS seq | ATGGACCTCGTCGTCGGCGCGTCGAGCGAAGCCGTGAAGTCACTCACCGGAAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGATCGCCAGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTGGCCTACGACATCGAGGACTGCGTCGACGATGTCGGTTACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGAGCGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACCAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCCAGGGCAATAATGGTGGTGGCGACAGCGGCCTTGGCGTCGGAGCTAACGCTCCTAGAGACCGTCTAGTTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGACATTAGTGAGCTCCAGAAGTGGTTTTCCAACGGGAAGGATGGCAACCAGCAGCTGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCAATGGCGTTGTACCGCGAGCTTGGAGACGAATTTGATTGCCGAGCATTCGTGCTCGCGTCGCAGAAGTTCCATCTCCCAACGGTTCTGAGAAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGATGCTCCTGAGGACGCCCTCCATGGAATTGAGGGGTGGGGAGATGAAATGCTCAAGAGGAAGCTCCTTGAACAATTAAAAAGCAAGAGGTTCCATATCTTGATAGATGACATATGGTCTGTATCAGCATGGGAAAATATCAGGGATTCATTGCCCAAGAATGACAAGGGTAGCTGTGTGGTGGTGACTACTAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAACGAGGGCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCCGCAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGCCCCAATAGACACATTAATGCTAGCATTATCATGAGGATATGTGGGGGTCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGAGTAGCGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGTTTGCTGTACTTGAGCACATTTCCGAAGGGACGCAATATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAACCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTGTCAACAACAGCAGCAACGGCAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCACTGTTATTGGCGGCCACTGGCAGACACCATTTCCAAGCTACAAGGTATTGGACCTTGATGGCTGCAAGGACTTGTCCCACCCACATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAATACCTGGGCCTGCGGCGGACAGATATTGACAAGATCCCGAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTTGACATTAGGGAGACAAATGTCAGAAAGTTGCCTACATCATTTGCGAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCGGACAGCATTGAAATTAACTGAGGAAATTACAAAGGTCGTAGCTCTACAAACACTTTCTGGGATTGAGATCAGTGGAAGCTCAACTTTGGAAGAAGACCGGGAGCAGTCACCAGATATGGCCATCAGAAACTCTACACCCACCAGAGCCGAGGAAAGAGACAACACGGCTTTGCATGGTCCCCATAAAGAAGATAGCAAAGCGGACTTTCCAAAACAGCTTCGTTCCCTTGAAGCTCTGGAGAAGCTCATCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCTAAAGACTATGAGTTACTTCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGACCGCTCACTGAGTTCATCGCAAGCACCACCAGAACACCTGTACACCCTTGAGCTTTCTGGCATGTTGTCTGAAGTGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGATACTTTGGCAGTTCTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGAAGACAATTATTCAAATGCTCTCAAAATAATGCATAAGAATACATTGGAGTCAGGAGGTACGATCTTTGTGCTGGATGAGGGATTTGAAAAGCTGAAGCTACTGCGTTTTGCGGCACCTGTGCTACCTTCTCTAAGCTTTCTAGAAGGGGCAATGCCGCAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTATGGTCTGGAAAACCTCTCAAAGCTGCACCAGGTATTTTTAACAGTCAGCAGCCAGGCACCTGAAGATACTAGGGCAAAGACATCTCAGATCAAACGACTGGCAAGCATGATTCAAAGGGCTAATAATTCCCCTAACCCCAGTGTGAATCAAGCACCTATCCTTTCCTCCCTTGTCGAGTATAAGAATCACACGGTGGCAGCAGCTCTGCAAGATTATGCTTGGGTGGCGACTGGCCAATATCAGAGGGGGGTTATCCTTGCAAGGGTATTCTATCCTCTCCGTCAAATCAGTGTATTCGCTGCTCTGTGCTCGGTGAACAAAGTGCGCCTTGGGCAGAATTGTGCGGAAATCCAGGGTGCCAGCACGTTCGTTGCAGGTGGCATTTGGCGAGCTTGTCACCTTTGCTGCTGCGATCTGGAAACCTGCTTGCCCATCTTCCACTGCTGCGCATGCACGGTGCAGGTCTGGGAGCGGGTGCACAGCCGCCTGGGCTTCATTTGCCCACAGCCTACACCGCATTTGCCTTCCTGGTGGCTCGCGGTCCGCAAGATGATCAACAAGCAGGAGAGGAGAACCTTCGATGCAGGTGTGATCCTGGTGACATGGCTTATCTGGAAGGAACACAATGCCCGTGTTTTTGAGGGGAAGGACACTATGGTGTTTGCTCTATGTGGAAGGTGGCTGGCCTATTTACACCGCCTGACACCGGGGCATATCAAGGCATTGAGGGTTCTGATGTGA
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| Protein seq | MDLVVGASSEAVKSLTGKLGSLLAQEYTLIASVRDDIQYINDELASMQAFLSKLKRRDVDHDEQRQDWMKQVREVAYDIEDCVDDVGYRLGREPRGSGAAISFQRAWYLLTTLYQRRRIAAEIGNLKLRAQHVSERRTRYGVENLQGNNGGGDSGLGVGANAPRDRLVPLPRLIGTMEPVGMDADISELQKWFSNGKDGNQQLRYLAIVGFGGLGKTTLAMALYRELGDEFDCRAFVLASQKFHLPTVLRSLVKQFHEKQADAPEDALHGIEGWGDEMLKRKLLEQLKSKRFHILIDDIWSVSAWENIRDSLPKNDKGSCVVVTTRFNSVAEACRRQRGHVHKLKQLDPESSRNLFLQIISANDLCPNRHINASIIMRICGGLPLAIVVVAGLIARVAQIINHCYKNLPPDLKTCLLYLSTFPKGRNISRKHLIRRWIAEGFITEEHGKTAEEVAEDNLNELIGRNLIKPVNNSSNGKVKSCQIHDMVLQYIVSKSSDENFITVIGGHWQTPFPSYKVLDLDGCKDLSHPHQLKKICNMYQLKYLGLRRTDIDKIPKNIGRLEYLEVLDIRETNVRKLPTSFAKLQRMTHLLAGNKSKRTALKLTEEITKVVALQTLSGIEISGSSTLEEDREQSPDMAIRNSTPTRAEERDNTALHGPHKEDSKADFPKQLRSLEALEKLINLKKLAIYKLVKFQAKDYELLLSAIEHLSSCSLKFLAIDDSFTGFLDRSLSSSQAPPEHLYTLELSGMLSEVPGWIDRLHNLEKLTLSLTSLKTDTLAVLSSLPELFSLTFSLHAEDNYSNALKIMHKNTLESGGTIFVLDEGFEKLKLLRFAAPVLPSLSFLEGAMPQLQRLELRFRMVDYMYGLENLSKLHQVFLTVSSQAPEDTRAKTSQIKRLASMIQRANNSPNPSVNQAPILSSLVEYKNHTVAAALQDYAWVATGQYQRGVILARVFYPLRQISVFAALCSVNKVRLGQNCAEIQGASTFVAGGIWRACHLCCCDLETCLPIFHCCACTVQVWERVHSRLGFICPQPTPHLPSWWLAVRKMINKQERRTFDAGVILVTWLIWKEHNARVFEGKDTMVFALCGRWLAYLHRLTPGHIKALRVLM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G019630 | OsN22_11G019630_03 | Chr11 | 25039967 | 25041103 | + | NAM | ||
| CDS seq | ATGGATGATCTAGACATAATCTACAATTGCAATAATCAAGCACCTATCCTTTCCTCCCTTGTCGAGTATAAGAATCACACGGTGGCAGCAGCTCTGCAAGATTATGCTTGGGTGGCGACTGGCCAATATCAGAGGGGGGTTATCCTTGCAAGGGTATTCTATCCTCTCCGTCAAATCAGTGTATTCGCTGCTCTGTGCTCGGTGAACAAAGTGCGCCTTGGGCAGAATTGTGCGGAAATCCAGGGTGCCAGCACGTTCGTTGCAGGTGGCATTTGGCGAGCTTGTCACCTTTGCTGCTGCGATCTGGAAACCTGCTTGCCCATCTTCCACTGCTGCGCATGCACGGTGCAGGTCTGGGAGCGGGTGCACAGCCGCCTGGGCTTCATTTGCCCACAGCCTACACCGCATTTGCCTTCCTGGTGGCTCGCGGTCCGCAAGATGATCAACAAGCAGGAGAGGAGAACCTTCGATGCAGGTGTGATCCTGGTGACATGGCTTATCTGGAAGGAACACAATGCCCGTGTTTTTGAGGGGAAGGACACTATGGTGTTTGCTCTATGTGGAAGGTGGCTGGCCTATTTACACCGCCTGACACCGGGGCATATCAAGGCATTGAGGGTTCTGATGTGA
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| Protein seq | MDDLDIIYNCNNQAPILSSLVEYKNHTVAAALQDYAWVATGQYQRGVILARVFYPLRQISVFAALCSVNKVRLGQNCAEIQGASTFVAGGIWRACHLCCCDLETCLPIFHCCACTVQVWERVHSRLGFICPQPTPHLPSWWLAVRKMINKQERRTFDAGVILVTWLIWKEHNARVFEGKDTMVFALCGRWLAYLHRLTPGHIKALRVLM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0606900 | RBH | 0.367631 | 0.000000 | 0.450013 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39320 | SBH | 0.968592 | 1.189013 | 0.135217 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0606900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019800 | SBH | 0.559700 | 0.506692 | 0.935483 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0019990 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019760 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0019280 | RBH | 0.000000 | 0.042257 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019850 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0356700 | SBH | 0.331005 | 2.836454 | 1.1120985 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020310 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0372600 | SBH | 4.088419 | 0.0735415 | 1.3815125 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020080 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020320 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019780 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0019560 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019670 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019760 | RBH | 0.053878 | 0.764113 | 0.759471 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020010 | RBH | 0.0 | 0.0 | 0.0 |
