Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_11g0019560 | OGI:11063750 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:26650767-26655289 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | atggacctcgtcgtcggcgcgtcgagcgaagccgtgaagtcgctgaccgggaagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccaggacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcctcagcaagctcaagcgacgggacgacgtcgaccacgacgagcagcgtcaggactggatgaagcaggtgcgggaggtggcctacgacatcgaggactgcgtcgacgatgtcggccaccgcctcggccgcgagccgcgggggagcggcgcggccatctccttccggagggcgtggtaccttctcaccaccctctaccagcgccgccgcatcgccgccgacatcggcaacctcaagctcagggcgcagcatgtcagcgagcgccgcaccaggtacggggtggagaacctccagggcattaatggtggtggcggcggcggcctcggcgtcggagccaacgctcctagagaccgtctagctcctcttccccggctgattggcaccatggagcctgtaggaatggatgctgccattggtgagctccaggagtggttctccaaagggaaggatggcacccagcagaggtacctcgccattgtcgggttcggtggccttggcaagaccacgctcgccatggcgttgtaccgcaagcttggggacgaattcgattgccgagcattcgtgctcgcgtcacagaagttccatctcccgacggttctgagaagccttgtcaagcagttccatgagaagcaggcagacgcttctgaggataccctccatggaattgagggttggggtgatgaaatgctgaagaagaagctgcttgaacaattaacaggcaagaggtatgattttgggattgctaatatctatctcttcaccacatttttattgtgctgtcttactagtcatcactccgtgcgtttgcatactcagaaaacctccaaattattgtacataaagattttttttttcgctgagaagaccgaaggaggccatccgaatgtattaagaagaaataaaagttacttgaaaaaacaccacaatgcaccaaggtgcacgaccacacaccaacgcactaccacctaagcacaaaccactgagggtgaacgccgctaggcatacggcaacaccacagagacgagactccgaaaacgatgccaccaagatggtcacaacatctagaatgccaccaccgcccatctaaaaagatgtggttttcacccagaaaagctcatcaagaaggggagagggtaaccctcgacagtgccccaaggaggttatgacgcccgaaggcgtagccgctgccggtttggtgaacaccggactagcctttcacctaggaccctataaccttgactgcagatcgccgtccaccacacagaaccaccacatagacaaaaaaggtagcacgtagcttccaccaccgctggcctcctcgtcagttttggccgaaggagaacccgggattgggtggcattgcttcggtagtctgagcttcccctgttgacaagctgctgcctcaatccaacctaggaactccccgcaaagaaggggagcagctccaggaagggcgagggtgctgatcggcaatgaggaagacgacccacctccgccaactccctttgcactaccatctgggcctacgccgacgccggatatgctgctgctccggcttcggcgccacctgtcggcgccccctttgtccggcctccgcgccccacctggccgctaagggcaccgcaacggcttcccggctacctgggcgtcaaggcctggccgagccatggggctgctcgcgccggtaccagcgagacacggctgccgcgacccacgccgctgagccgccaccgccgctcccaaccgccaagccgccacacccgggttgctgcaccagcaccataccgggcaggctgcgctagcaccgcctccacgcacctccgcacgctgccacgccccacctccacgcacctcacccgcacgctgccgagccgccaccgccgcgcacctcgctgagccgccaccgccgtccctagccgcctcgcgccgccaccacgctagatccaggcgcgggatggccggattcggccttggaggcaccggatccgctgcctccccacactgccacagcgtcaccacctccgaccgcgatgggggcttcgtcgttcaccccgtccacgtcgcgccgaggagggagaagccaagaagaaaggaaaatattgatattcctagttggaaaattttgattatacatttgtgtctggaatgagcactataaaacgtttttttataactagctaattacttccaaacaatgcttgaagcaggtaccatatcttggtagatgacatatggtctgtatcagcatgggaaaacattagggattcattccccaagagtgataagggtagttgtgtagtggtgactacaaggtttaactctgtagctgaagcctgccgccgtcaacaaggtcatgtgcacaagctcaaacagctcgatccagagagctcctacaatttgtttcttcagatgatatctgctaatgatctgtgtcccattagacctattaatgctcgcattatcatgaaaacgtgtgggggcctgcctttggcaattgtagtagtagcagggctgattgctagtaaaatgaaatcaaagattgacctgacattggatcagcatttggttgatgtagatgaggctttaagtgcagagttgggaagcaatctcaccaccgaaggagtaacgcaaataattaaccactgttacaaaaatctgccacctgatcttaagacatgcttgctgtacttgagcacatttcccaagggccgcagtattagcaggaagcatttgataagaagatggattgctgaaggattcattactgaagagcatgggaagactgctgaggaagttgcagaagacagcctcaatgaactcattggcaggaacttgataaagcctatcaacaacagcagcaacggcaaggtgaagagctgtcaaattcatgacatggttctccagtacattgtctccaagtctagtgatgagaatttcatcactgttattggcggccactggcagacaccatttccaagctacaaggtacggcgattgtctgttcataaaagtgattggcaagaaacagaaatggtagagaggatgaaattgtctcatgtccgatccttgacagtattggagagtttcagtgctcttcattctactatgctcaagttccagatactgcaggtattggaccttgatggttgcaaggacttgtcccactcacatcagctcaagaaaatatgcaacatgtatcagttgaaatacctgggcctgcggcggacagatattgacaagatcccgaagaatataggaaggctggagtacttggaggtacttgacattagggagacaaatgtcacaaagttgcctacatcatttgcgaagcttcagcgaatgacccatctacttgctggcaacaaaagcaagcggacagcattgaaattaactgaggaaattacaaaggtcgtagctctacaaacactttctgggattgagatcagtggaagctcaactttggaagaagaccgggagcagtcaccagatatggccatcagaaactctacacccaccagagccgaggaaagagacaacacggctttgcatggtccccataaagaagatagcaaagtggactttccaaaacagcttcgttcccttgaagctctggagaagctcatcaaccttaagaaacttgccatttacaagcttgtaaagttccaagctaaagacgatgagttacttctctctgctattgagcatttgagcagttgttccctcaagtttcttgcaattgatgacagtttcacaggtttccttgacagctcactgagttcttcgcaagcaccaccagaacacctgtacacccttgaactttctggcatgttgtctaaagtgcctggatggattgaccgcctgcacaaccttgagaagcttactctgtcattgacttcacttaagacaggtactttggcggttctgagtagcctgcctgagttattctctctcactttttcactccatgcagcagacaattattcaaatgctctcaaaataatgcataagaatacattggagtcaggaggtatgatctttgtgctagatgagggatttgaaaagctgaagctactgcgttttgcggcacctgtgctaccttctctgagctttctagaaggggcaatgcggcagcttcagaggcttgagctgaggttcagaatggtggactatatgtacggtctggaaaacctctcaaagctgcaacaggtatttttaacagtcagcagccaggcacctgaagatactagggcaaagacatctcatatcaaacgactggcaaacatgattcaaaaggctaataattcccctaaccccagtgtggtgatagatgagtacaacgaactagcaaaacaatgatggatgatctagacataatc
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CDS seq | atggacctcgtcgtcggcgcgtcgagcgaagccgtgaagtcgctgaccgggaagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccaggacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcctcagcaagctcaagcgacgggacgacgtcgaccacgacgagcagcgtcaggactggatgaagcaggtgcgggaggtggcctacgacatcgaggactgcgtcgacgatgtcggccaccgcctcggccgcgagccgcgggggagcggcgcggccatctccttccggagggcgtggtaccttctcaccaccctctaccagcgccgccgcatcgccgccgacatcggcaacctcaagctcagggcgcagcatgtcagcgagcgccgcaccaggtacggggtggagaacctccagggcattaatggtggtggcggcggcggcctcggcgtcggagccaacgctcctagagaccgtctagctcctcttccccggctgattggcaccatggagcctgtaggaatggatgctgccattggtgagctccaggagtggttctccaaagggaaggatggcacccagcagaggtacctcgccattgtcgggttcggtggccttggcaagaccacgctcgccatggcgttgtaccgcaagcttggggacgaattcgattgccgagcattcgtgctcgcgtcacagaagttccatctcccgacggttctgagaagccttgtcaagcagttccatgagaagcaggcagacgcttctgaggataccctccatggaattgagggttggggtgatgaaatgctgaagaagaagctgcttgaacaattaacaggcaagagcaggtaccatatcttggtagatgacatatggtctgtatcagcatgggaaaacattagggattcattccccaagagtgataagggtagttgtgtagtggtgactacaaggtttaactctgtagctgaagcctgccgccgtcaacaaggtcatgtgcacaagctcaaacagctcgatccagagagctcctacaatttgtttcttcagatgatatctgctaatgatctgtgtcccattagacctattaatgctcgcattatcatgaaaacgtgtgggggcctgcctttggcaattgtagtagtagcagggctgattgctagtaaaatgaaatcaaagattgacctgacattggatcagcatttggttgatgtagatgaggctttaagtgcagagttgggaagcaatctcaccaccgaaggagtaacgcaaataattaaccactgttacaaaaatctgccacctgatcttaagacatgcttgctgtacttgagcacatttcccaagggccgcagtattagcaggaagcatttgataagaagatggattgctgaaggattcattactgaagagcatgggaagactgctgaggaagttgcagaagacagcctcaatgaactcattggcaggaacttgataaagcctatcaacaacagcagcaacggcaaggtgaagagctgtcaaattcatgacatggttctccagtacattgtctccaagtctagtgatgagaatttcatcactgttattggcggccactggcagacaccatttccaagctacaaggtacggcgattgtctgttcataaaagtgattggcaagaaacagaaatggtagagaggatgaaattgtctcatgtccgatccttgacagtattggagagtttcagtgctcttcattctactatgctcaagttccagatactgcaggtattggaccttgatggttgcaaggacttgtcccactcacatcagctcaagaaaatatgcaacatgtatcagttgaaatacctgggcctgcggcggacagatattgacaagatcccgaagaatataggaaggctggagtacttggaggtacttgacattagggagacaaatgtcacaaagttgcctacatcatttgcgaagcttcagcgaatgacccatctacttgctggcaacaaaagcaagcggacagcattgaaattaactgaggaaattacaaaggtcgtagctctacaaacactttctgggattgagatcagtggaagctcaactttggaagaagaccgggagcagtcaccagatatggccatcagaaactctacacccaccagagccgaggaaagagacaacacggctttgcatggtccccataaagaagatagcaaagtggactttccaaaacagcttcgttcccttgaagctctggagaagctcatcaaccttaagaaacttgccatttacaagcttgtaaagttccaagctaaagacgatgagttacttctctctgctattgagcatttgagcagttgttccctcaagtttcttgcaattgatgacagtttcacaggtttccttgacagctcactgagttcttcgcaagcaccaccagaacacctgtacacccttgaactttctggcatgttgtctaaagtgcctggatggattgaccgcctgcacaaccttgagaagcttactctgtcattgacttcacttaagacaggtactttggcggttctgagtagcctgcctgagttattctctctcactttttcactccatgcagcagacaattattcaaatgctctcaaaataatgcataagaatacattggagtcaggaggtatgatctttgtgctagatgagggatttgaaaagctgaagctactgcgttttgcggcacctgtgctaccttctctgagctttctagaaggggcaatgcggcagcttcagaggcttgagctgaggttcagaatggtggactatatgtacggtctggaaaacctctcaaagctgcaacaggtatttttaacagtcagcagccaggcacctgaagatactagggcaaagacatctcatatcaaacgactggcaaacatgattcaaaaggctaataattcccctaaccccagtgtggtgatagatgagtacaacgaactagcaaaacaatga
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Protein seq | MDLVVGASSEAVKSLTGKLGSLLAQEYTLIAGVQDDIQYINDELASMQAFLSKLKRRDDVDHDEQRQDWMKQVREVAYDIEDCVDDVGHRLGREPRGSGAAISFRRAWYLLTTLYQRRRIAADIGNLKLRAQHVSERRTRYGVENLQGINGGGGGGLGVGANAPRDRLAPLPRLIGTMEPVGMDAAIGELQEWFSKGKDGTQQRYLAIVGFGGLGKTTLAMALYRKLGDEFDCRAFVLASQKFHLPTVLRSLVKQFHEKQADASEDTLHGIEGWGDEMLKKKLLEQLTGKSRYHILVDDIWSVSAWENIRDSFPKSDKGSCVVVTTRFNSVAEACRRQQGHVHKLKQLDPESSYNLFLQMISANDLCPIRPINARIIMKTCGGLPLAIVVVAGLIASKMKSKIDLTLDQHLVDVDEALSAELGSNLTTEGVTQIINHCYKNLPPDLKTCLLYLSTFPKGRSISRKHLIRRWIAEGFITEEHGKTAEEVAEDSLNELIGRNLIKPINNSSNGKVKSCQIHDMVLQYIVSKSSDENFITVIGGHWQTPFPSYKVRRLSVHKSDWQETEMVERMKLSHVRSLTVLESFSALHSTMLKFQILQVLDLDGCKDLSHSHQLKKICNMYQLKYLGLRRTDIDKIPKNIGRLEYLEVLDIRETNVTKLPTSFAKLQRMTHLLAGNKSKRTALKLTEEITKVVALQTLSGIEISGSSTLEEDREQSPDMAIRNSTPTRAEERDNTALHGPHKEDSKVDFPKQLRSLEALEKLINLKKLAIYKLVKFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLDSSLSSSQAPPEHLYTLELSGMLSKVPGWIDRLHNLEKLTLSLTSLKTGTLAVLSSLPELFSLTFSLHAADNYSNALKIMHKNTLESGGMIFVLDEGFEKLKLLRFAAPVLPSLSFLEGAMRQLQRLELRFRMVDYMYGLENLSKLQQVFLTVSSQAPEDTRAKTSHIKRLANMIQKANNSPNPSVVIDEYNELAKQ |
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Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_11g0019560 | OsLiXu_11g0019560.01 | Chr11 | 26650767 | 26655289 | + | NAM | ||
CDS seq | atggacctcgtcgtcggcgcgtcgagcgaagccgtgaagtcgctgaccgggaagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccaggacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcctcagcaagctcaagcgacgggacgacgtcgaccacgacgagcagcgtcaggactggatgaagcaggtgcgggaggtggcctacgacatcgaggactgcgtcgacgatgtcggccaccgcctcggccgcgagccgcgggggagcggcgcggccatctccttccggagggcgtggtaccttctcaccaccctctaccagcgccgccgcatcgccgccgacatcggcaacctcaagctcagggcgcagcatgtcagcgagcgccgcaccaggtacggggtggagaacctccagggcattaatggtggtggcggcggcggcctcggcgtcggagccaacgctcctagagaccgtctagctcctcttccccggctgattggcaccatggagcctgtaggaatggatgctgccattggtgagctccaggagtggttctccaaagggaaggatggcacccagcagaggtacctcgccattgtcgggttcggtggccttggcaagaccacgctcgccatggcgttgtaccgcaagcttggggacgaattcgattgccgagcattcgtgctcgcgtcacagaagttccatctcccgacggttctgagaagccttgtcaagcagttccatgagaagcaggcagacgcttctgaggataccctccatggaattgagggttggggtgatgaaatgctgaagaagaagctgcttgaacaattaacaggcaagagcaggtaccatatcttggtagatgacatatggtctgtatcagcatgggaaaacattagggattcattccccaagagtgataagggtagttgtgtagtggtgactacaaggtttaactctgtagctgaagcctgccgccgtcaacaaggtcatgtgcacaagctcaaacagctcgatccagagagctcctacaatttgtttcttcagatgatatctgctaatgatctgtgtcccattagacctattaatgctcgcattatcatgaaaacgtgtgggggcctgcctttggcaattgtagtagtagcagggctgattgctagtaaaatgaaatcaaagattgacctgacattggatcagcatttggttgatgtagatgaggctttaagtgcagagttgggaagcaatctcaccaccgaaggagtaacgcaaataattaaccactgttacaaaaatctgccacctgatcttaagacatgcttgctgtacttgagcacatttcccaagggccgcagtattagcaggaagcatttgataagaagatggattgctgaaggattcattactgaagagcatgggaagactgctgaggaagttgcagaagacagcctcaatgaactcattggcaggaacttgataaagcctatcaacaacagcagcaacggcaaggtgaagagctgtcaaattcatgacatggttctccagtacattgtctccaagtctagtgatgagaatttcatcactgttattggcggccactggcagacaccatttccaagctacaaggtacggcgattgtctgttcataaaagtgattggcaagaaacagaaatggtagagaggatgaaattgtctcatgtccgatccttgacagtattggagagtttcagtgctcttcattctactatgctcaagttccagatactgcaggtattggaccttgatggttgcaaggacttgtcccactcacatcagctcaagaaaatatgcaacatgtatcagttgaaatacctgggcctgcggcggacagatattgacaagatcccgaagaatataggaaggctggagtacttggaggtacttgacattagggagacaaatgtcacaaagttgcctacatcatttgcgaagcttcagcgaatgacccatctacttgctggcaacaaaagcaagcggacagcattgaaattaactgaggaaattacaaaggtcgtagctctacaaacactttctgggattgagatcagtggaagctcaactttggaagaagaccgggagcagtcaccagatatggccatcagaaactctacacccaccagagccgaggaaagagacaacacggctttgcatggtccccataaagaagatagcaaagtggactttccaaaacagcttcgttcccttgaagctctggagaagctcatcaaccttaagaaacttgccatttacaagcttgtaaagttccaagctaaagacgatgagttacttctctctgctattgagcatttgagcagttgttccctcaagtttcttgcaattgatgacagtttcacaggtttccttgacagctcactgagttcttcgcaagcaccaccagaacacctgtacacccttgaactttctggcatgttgtctaaagtgcctggatggattgaccgcctgcacaaccttgagaagcttactctgtcattgacttcacttaagacaggtactttggcggttctgagtagcctgcctgagttattctctctcactttttcactccatgcagcagacaattattcaaatgctctcaaaataatgcataagaatacattggagtcaggaggtatgatctttgtgctagatgagggatttgaaaagctgaagctactgcgttttgcggcacctgtgctaccttctctgagctttctagaaggggcaatgcggcagcttcagaggcttgagctgaggttcagaatggtggactatatgtacggtctggaaaacctctcaaagctgcaacaggtatttttaacagtcagcagccaggcacctgaagatactagggcaaagacatctcatatcaaacgactggcaaacatgattcaaaaggctaataattcccctaaccccagtgtggtgatagatgagtacaacgaactagcaaaacaatga
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Protein seq | MDLVVGASSEAVKSLTGKLGSLLAQEYTLIAGVQDDIQYINDELASMQAFLSKLKRRDDVDHDEQRQDWMKQVREVAYDIEDCVDDVGHRLGREPRGSGAAISFRRAWYLLTTLYQRRRIAADIGNLKLRAQHVSERRTRYGVENLQGINGGGGGGLGVGANAPRDRLAPLPRLIGTMEPVGMDAAIGELQEWFSKGKDGTQQRYLAIVGFGGLGKTTLAMALYRKLGDEFDCRAFVLASQKFHLPTVLRSLVKQFHEKQADASEDTLHGIEGWGDEMLKKKLLEQLTGKSRYHILVDDIWSVSAWENIRDSFPKSDKGSCVVVTTRFNSVAEACRRQQGHVHKLKQLDPESSYNLFLQMISANDLCPIRPINARIIMKTCGGLPLAIVVVAGLIASKMKSKIDLTLDQHLVDVDEALSAELGSNLTTEGVTQIINHCYKNLPPDLKTCLLYLSTFPKGRSISRKHLIRRWIAEGFITEEHGKTAEEVAEDSLNELIGRNLIKPINNSSNGKVKSCQIHDMVLQYIVSKSSDENFITVIGGHWQTPFPSYKVRRLSVHKSDWQETEMVERMKLSHVRSLTVLESFSALHSTMLKFQILQVLDLDGCKDLSHSHQLKKICNMYQLKYLGLRRTDIDKIPKNIGRLEYLEVLDIRETNVTKLPTSFAKLQRMTHLLAGNKSKRTALKLTEEITKVVALQTLSGIEISGSSTLEEDREQSPDMAIRNSTPTRAEERDNTALHGPHKEDSKVDFPKQLRSLEALEKLINLKKLAIYKLVKFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLDSSLSSSQAPPEHLYTLELSGMLSKVPGWIDRLHNLEKLTLSLTSLKTGTLAVLSSLPELFSLTFSLHAADNYSNALKIMHKNTLESGGMIFVLDEGFEKLKLLRFAAPVLPSLSFLEGAMRQLQRLELRFRMVDYMYGLENLSKLQQVFLTVSSQAPEDTRAKTSHIKRLANMIQKANNSPNPSVVIDEYNELAKQ
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0606900 | RBH | 0.367631 | 0.000000 | 0.450013 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39320 | SBH | 0.968592 | 1.189013 | 0.135217 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0606900 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019830 | RBH | 0.057990 | 0.0 | 0.193593 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0019990 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019750 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0019280 | RBH | 0.000000 | 0.042257 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019840 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0356700 | SBH | 0.331005 | 2.836454 | 1.1120985 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020300 | RBH | 0.029762 | 0.049338 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0374200 | SBH | 1.109171 | 2.394498 | 0.3459235 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020080 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020310 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019760 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0019540 | RBH | 0.0 | 0.0 | 0.148714 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019670 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019630 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020010 | RBH | 0.0 | 0.0 | 0.0 |