Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsN22_11G007320 | OGI:11017790 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:6428458-6435433 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGGCGTCCCTCTCCTCCATCCTCCTCGGCTGCTTCCTCCTCGCAGCCGCCGTCTTCCTCCACCGCAACGGCGCCTCCACCACCACCACCACCACCACCCACCTCCACTTCTACATGCACGACGCCTACACCGGCCCGTCTCCCACCGCCATGCGCGTCGTCTCCGGCCGCTCCTTGTTGCTCGATGGCGGCGGCGACGGCTCGCCGCCGCGTCAGTTCGGCGACATCGTGGCGCTGAACAACGCGCTGACGGAGGGGCCATCCGCCGGCAGCGCGCGCGTGGGCACGGCGCAGGGGTTCGCGGTGCGGGTGTCGGAGGGCGGCGTGGTGTCGGACCTGAGCCTGCACATGGTGCTGGAGGCCGGCGAGCACCGCGGCAGCTCGGTGACGGCGAAGGGGCGCATCGACATGGACGCCGGCGAGCGCGAGTCGGTGGTGATCGGCGGCACGGGGCGGTTCCGGTTGGCGCGCGGGTACATGGTCACCAAGAACTACGACTACAGCCTCGCCACCGGTGGCATCGTCGAGATCGACCTCTACCTGCAGCACTAGCTAGCACGGAGCTAGCCATGGACAGGAAACGCACGCGACTACTGCTGCATATATGCATGGCTGCATGCATCATCTGTGCGAGGAGTTGTGCAGCGGCGGATTTATGAAGAAAAAATAGCGAGGGGTCTGAACAACAATACAAAGTTATAACTTCTTTCTATCTGTATATATTAAAAATATTTGATGGGGTTTTATGGGGGCTCGTATTGTCCTCGCGTTAATAGTAGAGGCTCAAGATCCCGATGCCCCCATGATATATATGCCCTAAAGTTGCGTGTATAGTTTCTTTGTGGAATGAAAATCCATCTCCTATATACGTAGATAGTTCAAAGTGTCGAGAAGTTGTAACTAGACTAATATATATTGTCCAGTTGATGTATTGTCCAGTTGTAACATTAATTATATATTTATTTATGGTTTTTTAGCCCTTGATTGTTGTTTGTTTTGATAAAAAATAATTAGCACGAGCCCTTGATAGTTGTTTGCTTTAAATATAATAATTTTTGAATCTGAAATTAACAAATAAGAAGATGTATATCTATTGGCATTGTCTTTATCATACCGGTGATATGAGCTGATGTTATCAGCTGAATATTTGAACATGTGCTCAGTAATATTTAGACAAGTGCTTGGATATGATTCGACACCACTACGGTTCAGGCGTCTGATATTTAGCTTAAAAATCGGACGCCCACCTCAGCCTCCATCACACATGTAGGCGCACCACACAAAGCCTAAAAAATCTTGCGTAGACACGTAGCTAAGTCTACATTCATGCATTCATCTAATAAAAATTAGGCTATTTTTTCTCTTAATTTTCTTCTTCCATTTACAATCCGATACCGCTATTAAATTCGCTGCAATTAAATGTTTAGAACAAGACCACACATGGTTATATTTTAATGAAAAATATTTAGCATTTTTACATTTCTTTTAAATGTTGCACATATTTTATTTAAATGTTTCAACTAGAATACATATAATGTTTCACTAGTTAACAACATTGGTTTTCCTGGAATGTTTCAGCAAACATTTTATAATGTTTCAATAGTTACAATTTAATATTAATATGTGATATAAATATGACTTTTTTCGCTCTTTGGGACTCATTGTTTTATATAGGTGGTTACTGTTGTTGCAATCGGTAGTTTTAATTGTTGCATTTCTCTGAAACACTTTATACAGTGAACAATTTTCTTTAAAGGGTGAAACAATATTTGATTTATTTATCAAAATATAATTGTGTGATATATTATTATAAATATTTAATTGTAAGGAATACAACAGTTTATCAAATCATAGAACAGATAATTATTTTCGAAGAAAAAACATTTGAAAAGGGGAGAAAACATGCAAATGAGGAAGCAAAAACTTACGTGGACATGCACGACTGGCATGACATGAAATGCATGTGTAGACATATACACTATGAACGAGAAAAGGAGAGTAGCGGTGAGAGAGAAAACTGACTCAACGATAGAGTAGTTGAAGCGTTAGGTGGACGCTCGATTTTCGGTTCGTTGAGATCAGGTGTCCGACTCATAGCATTACTGGGATCCGTATGTACGAGCAAGATAAAATTAATTAAGCATGTATGATCATGCCTATCCAGTATATATCCACAATATATTCCGGGTAAGACGTTACGTGACGGTCCAAGGATTCTCGTGGGATGCCAGCCAAATATAAATCTGGCGATTCCATGTAATGCAAATATCTTGCTAGGAACACAATGTCTAAATAAATAGGTTTTAAAATAATTTGTAAGAATGTATGTTCCGCAATACAAAATTTAATTTAAAGGGATAACACATTTTTTATAGCTTGATGCGTAAACAAAAATGTTTATATTTTGGAATGGGGTGAGTATTTCTCATCGATCAATTAAATTTCATCCAGGTTCACTGGACCTTCTCAGTATTCAAAGATAGGATCTGGACTCTTTAAGTCCTCACCCGTTTTTTTACGGGTGAAAAGGATACAGAAATTTCCTGACCATATCAATATCATCCGCAAAACTAATATATTAATAATATTTTTATCGATTGTTAAAATCTTCCTTGAGAAAAATCTTACATAATTAGGCTTTAAAAGTATGAAACAACATACTTTTCCCTTAAAAAGGTTATGGAACAACTTGAAAGGAAGTAATGCGTGCAATATAATGAAATTGCTTGCAAAATTTAAAGGGAATGTCTAACCATCATATTGACAGAAATCCTCCTAAAAATCTTTCAAATATAACTACAGTACAATTATAGTCATAATCATAATATAATTACAATATAAATTAGTTACATAGATGTAACTTGCCATGTAACTCGGAAAAAAGATCAAGGCTGATCAAGGCTCAGTGGTGGAGACATGCCATGGTATCCCGCAGGTTGTCTACGACACACACACATCCACTATATATGCTTGATTTTTAATTTCTCAATCCTGCATGCACGAAAAAAAAAGGAAAGACCAATTTTCTATCACATGTTAGATAGTAATTCCTAAATTATATTTAAACGGATGGCATGAGGTTTTAATTTGGTACAGGCAGATCCGGTTTTAATTCAAAATATGATTTTCTTTTAATTCCATCAATTAGATTTCATTGAAGATTAAAGAATACCCTTTTTATTTCAAGCTTTCTCTACCACAAACTCTACTACTCCCCCATGTCACTTTTGGATGGTTTTATGTGTGTGCCTAAAAAGAAAATCATTGGAAAAAGGCGGTATCCAGGACATAGTTAATTTCGTCTCTCTCATCTTCTTATCATCCTTGATTCTGTGTGGCTCCCAAAAAAACGTCGAAAATTCGTTGTTCGGTGTCCATCTCATCTCCTACTTTAATTATCCCAGGCCGGTGTCTGTCTGTGGCTACTGGCTACCAAAAAGTTGAAAAATTCGTCTGAAAATTAAAACTAGATCCGATCCACCGACAGGAACCCTCGTGTAAATCACTTCCAATCCTTTTTTTTTTTGTTCAACCAGTCTATACCACTCAAAGCTGTACATGTTTAAAACATGATTACTTTTTGTATGGTCTCACTCATAATGTCATATTCCTCTTTATGTTTCCTTCCCCTGGCTCCATCGAAGAATCCTTGTATTCACATATGCTCCGACGGCGAAGGGGATCTCGCCTGGGAGAGCGAAGGCGGCTGGCCTGCAGCAATTTCTTAGTATCCGAAACAAGCTTTATTATCAGTAAAAGCTCCATTGCATATCCTCCCAGTGGAATTCACGACATGACATGGAACACAACTCATCGCACTCGGTCCAACTTCGGCCCAATGGAAAGGGACAACTCGTGACCCTCGGAAAACGTCCACTTATGGCCCACGAACGAACGGCCTCTTGAAAACAGCCCAAGTTACTTAAATGAATAAGTATATTTGTACCCCTCATCCATGCACATTGTCCAATCGCATTCCTCAATCGCAAACATGGTATAAGGCCTCCCCTAACTTTAAAAACTTAGTGCAAATCGACTTCTTTGATGATTTAAAAAAGAGGTTTTATGATAATGTGGAAAATTGACAGTGGTCAGATCGCTAAGAAATAGACGTATTCCCTAAATCGGTTCACTTTTGGCCCACGTGAAAACTTCCTAGATATGTCTCACACAAAAGTAGCCCAACTAGAGCCTACGCAGGCCGATCTAAGATGCGGCCCACATAGAACCAAACGAGCCCAAGTGAGAATGATCCAGCTGTCGAAGCCATCGGCCTAGACTAGAGCCTACTTAGACCAATCAGCGACCAATTTTGCTATATATTTATCGAAAAATTTGACATGCGTAAATATAGTACAATTACAGTGTAATTATATTATAACTTGTATGTAACTTTTATATAATTTTAAATCGTTAGATTTGCTCCAAGATTTGTTCAAGCGATAAGGAAAGAAAATCACAGCATGTACACATATGAGGGAGCAATTTTACGGTCCTTAAGGAGGTACCATTTTTTCTATTGTAAATTTGGTACCTCTAAATTTTTGTACACTAAATTTTTGTTATTGTAAATTTTGTACACTAAATTTTTTGTACTTCATGGTACCTCCTCAAGGACCGTAGAATTGCTCCATATGAGGAGATTCGGTCCTACGTCCTTTGTTTCATGGAAATAGCATGTTACCAATGGATTTCGAAAGTCACATAGAAGTTACAAAATGTAATTACTGTTAACACCCAAATTTTGCATCCAGACATGAAATAGGAAAATATAGCCAAATTTGGAAGTAACTGGTTTCCACTACGCGAGGCCAGTATGACCGCTGCTATAGGTCTGTCAAACAACAAATGTGTGATGGGTCTGGCAGGCAGCATGTGCCCGGTTAGATCGATTGACTCCGAGACCAAGTCGAGTTTTGCTAGGTTTCGGGTTTTCTTACTTGGGAGGTATTTTTGTAGTTCTAATTAGTCTCTACCCCGAGTTAGACGTGGAGACCAACCCCTTTATAAGGTCAAGGCCAGTTCAATTGAGACACCAATATACTTCCAACACAATTAGCCAAATGAATCACACTTTTAATATCGCATCTATTTTTTTTCTAGTCCTAACCTAGTTTTCATCCATCTTCATCGATTTGCGCTGAAAATCGTCCATACTTGTCAAGAGAGTGCAAATCCCCTTTACATGTTTGTCCCGCCTTCCGTTTCACTAAGACGGGAGTTTATCCCTATTCCATCTAAATGGGTCCGCTTGCCGGTTTGGTTTTACAAAACCTATCTTGATTTGATTTTGTTCAGGTTGAGGTGGTTGGTGATTACGTATCACCGCAAAACATTTGGTGTTTCGGTTGTGTTTTGTCGGCATGAAAAAAAAGTTGCTAACAAATTGTCAAAAAAAATATATAGGTAGTTCCGAAGATCAAGCATGAGTGGAGAAGAGCACGACACACAAATCTTGAATCCTCTCTCGAATTTGACCTGTACTCACCCTCAATTCCTCAAAGGACGGAGAGATTTTCAGAAAGAAAATCGCCAACCATGAGAGATGGAAGAACTGCCACGCATTTCTACCCTCGATATTCCTCCAACAAATCAATCCAACACCACCGATCCAATCGATCACCAACCTCCGATTTCGACATGGCCCGACACAGTACACCCGCCCCCTAACTTTTGCTTAACTCGCACTGATCATCATATGCATAAAGCATATCAAAGCTACTGTCCTGTCAACCTCTACCACCGCACATCTCACATACTCATCTTTTTTTTTAAAGATAATAGAATATAATCCCGGCCTTTGCTCAAAGAGCTACAGCCAATTATTACACCAACTCAATAAAAACTCACACATGAATAAACAAAAGCACAGACGAACTAATAAAAACTCATACAGCATAAAAAGAACACAAAAATTATTAATAAATTCTACTTGTGAATCTCACATACTCACCTGCTGATGGACCATCTCAATAGTGCCAATGGCGCCATCCACCATTACAAAGGTGTCTCCACCGATCGAACGTTCGACGTCGAACCACCACTAGCTAACTAGCTAGCCATGCCCCTCCTGCTGCAGCTGGTGCTCGCCGTCGCCGCCGTCGCCGTCGCCGTTGGCGCGGCGACGACGACGACGACGCACACGCGGTTCTACATGCACGACACGGTGACCGCGTCGGCGTCAGGGGGCGGGCCGGCGGCGACGGCGGTGCGCGTGGTGAGGGGCGCGGCCGCGGCGGCGCTGCCGGGCGATGCGGTGAACCGGTTCGGCGACCTGTACGCCGTCGACGACCCGCTGACGGACGGCCCCGACGCGTCGTCGTCCGCCGCCGTGGGGCGCGCCAGGGGGTTCTACATGTTCGCGTCGCGGACGGACTCGGCGCTGCTGTTCAGCGCCACCATGGAGTTCACGGCGGGGGTGCACCGCGGCGGCGCCGTGTCGGTGCTCGCCAGGGACGCCATACTCGACGAGGTGAGGGAGCTGCCGGTGGTCGGCGGCGCCGGCGTGCTCCGCGGCGCCGCCGGGTACGGCCTCCTCAGGACGCACTCCTTCAACGCCACCACCAACAACGCCGTCCTGCAGATCGACATGTACCTCACCGTGTAGAAGATCGACTACAAGTTCTTGCCCACGATCTGAATTAGTTGCAGTTACCGTGTACTTACCGACTACAAGTTGCTCAAAGGTGCCGATTCTGTACATTTTCATTCTACGGAAGTAGAAAAAGATCTTATGTACCAATTTTAAATAAACCGATACCTATAAGCCAATACTTATGAGGGGTTTTGTAGCAGTATAAATTCATTACTAGCGAGAGTTCAAAGTAGGTCTTATAATAAGTTAGACATCTACTATTCTACCTACCCTTGGTTTGTCTAAAAATAAGTTCATCACAAATTTTTCTTGGTATTGTATGAAGGGAATATGCATTTATTTTGGGATAAAAGAGTATATATGTGACATGTATGAAGTTAC
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CDS seq | ATGGCGTCCCTCTCCTCCATCCTCCTCGGCTGCTTCCTCCTCGCAGCCGCCGTCTTCCTCCACCGCAACGGCGCCTCCACCACCACCACCACCACCACCCACCTCCACTTCTACATGCACGACGCCTACACCGGCCCGTCTCCCACCGCCATGCGCGTCGTCTCCGGCCGCTCCTTGTTGCTCGATGGCGGCGGCGACGGCTCGCCGCCGCGTCAGTTCGGCGACATCGTGGCGCTGAACAACGCGCTGACGGAGGGGCCATCCGCCGGCAGCGCGCGCGTGGGCACGGCGCAGGGGTTCGCGGTGCGGGTGTCGGAGGGCGGCGTGGTGTCGGACCTGAGCCTGCACATGGTGCTGGAGGCCGGCGAGCACCGCGGCAGCTCGGTGACGGCGAAGGGGCGCATCGACATGGACGCCGGCGAGCGCGAGTCGGTGGTGATCGGCGGCACGGGGCGGTTCCGGTTGGCGCGCGGGTACATGGTCACCAAGAACTACGACTACAGCCTCGCCACCGGTGGCATCCTGGTGCTCGCCGTCGCCGCCGTCGCCGTCGCCGTTGGCGCGGCGACGACGACGACGACGCACACGCGGTTCTACATGCACGACACGGTGACCGCGTCGGCGTCAGGGGGCGGGCCGGCGGCGACGGCGGTGCGCGTGGTGAGGGGCGCGGCCGCGGCGGCGCTGCCGGGCGATGCGGTGAACCGGTTCGGCGACCTGTACGCCGTCGACGACCCGCTGACGGACGGCCCCGACGCGTCGTCGTCCGCCGCCGTGGGGCGCGCCAGGGGGTTCTACATGTTCGCGTCGCGGACGGACTCGGCGCTGCTGTTCAGCGCCACCATGGAGTTCACGGCGGGGGTGCACCGCGGCGGCGCCGTGTCGGTGCTCGCCAGGGACGCCATACTCGACGAGGTGAGGGAGCTGCCGGTGGTCGGCGGCGCCGGCGTGCTCCGCGGCGCCGCCGGGTACGGCCTCCTCAGGACGCACTCCTTCAACGCCACCACCAACAACGCCGTCCTGCAGATCGACATGTACCTCACCGTGTAG
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Protein seq | MASLSSILLGCFLLAAAVFLHRNGASTTTTTTTHLHFYMHDAYTGPSPTAMRVVSGRSLLLDGGGDGSPPRQFGDIVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVVSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVVIGGTGRFRLARGYMVTKNYDYSLATGGILVLAVAAVAVAVGAATTTTTHTRFYMHDTVTASASGGGPAATAVRVVRGAAAAALPGDAVNRFGDLYAVDDPLTDGPDASSSAAVGRARGFYMFASRTDSALLFSATMEFTAGVHRGGAVSVLARDAILDEVRELPVVGGAGVLRGAAGYGLLRTHSFNATTNNAVLQIDMYLTV |
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Function | Dirigent protein 19 [UniProtKB/Swiss-Prot:Q9C523] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_11G007320 | OsN22_11G007320_01 | Chr11 | 6428458 | 6435064 | + | NAM | ||
CDS seq | ATGGCGTCCCTCTCCTCCATCCTCCTCGGCTGCTTCCTCCTCGCAGCCGCCGTCTTCCTCCACCGCAACGGCGCCTCCACCACCACCACCACCACCACCCACCTCCACTTCTACATGCACGACGCCTACACCGGCCCGTCTCCCACCGCCATGCGCGTCGTCTCCGGCCGCTCCTTGTTGCTCGATGGCGGCGGCGACGGCTCGCCGCCGCGTCAGTTCGGCGACATCGTGGCGCTGAACAACGCGCTGACGGAGGGGCCATCCGCCGGCAGCGCGCGCGTGGGCACGGCGCAGGGGTTCGCGGTGCGGGTGTCGGAGGGCGGCGTGGTGTCGGACCTGAGCCTGCACATGGTGCTGGAGGCCGGCGAGCACCGCGGCAGCTCGGTGACGGCGAAGGGGCGCATCGACATGGACGCCGGCGAGCGCGAGTCGGTGGTGATCGGCGGCACGGGGCGGTTCCGGTTGGCGCGCGGGTACATGGTCACCAAGAACTACGACTACAGCCTCGCCACCGGTGGCATCCTGGTGCTCGCCGTCGCCGCCGTCGCCGTCGCCGTTGGCGCGGCGACGACGACGACGACGCACACGCGGTTCTACATGCACGACACGGTGACCGCGTCGGCGTCAGGGGGCGGGCCGGCGGCGACGGCGGTGCGCGTGGTGAGGGGCGCGGCCGCGGCGGCGCTGCCGGGCGATGCGGTGAACCGGTTCGGCGACCTGTACGCCGTCGACGACCCGCTGACGGACGGCCCCGACGCGTCGTCGTCCGCCGCCGTGGGGCGCGCCAGGGGGTTCTACATGTTCGCGTCGCGGACGGACTCGGCGCTGCTGTTCAGCGCCACCATGGAGTTCACGGCGGGGGTGCACCGCGGCGGCGCCGTGTCGGTGCTCGCCAGGGACGCCATACTCGACGAGGTGAGGGAGCTGCCGGTGGTCGGCGGCGCCGGCGTGCTCCGCGGCGCCGCCGGGTACGGCCTCCTCAGGACGCACTCCTTCAACGCCACCACCAACAACGCCGTCCTGCAGATCGACATGTACCTCACCGTGTAG
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Protein seq | MASLSSILLGCFLLAAAVFLHRNGASTTTTTTTHLHFYMHDAYTGPSPTAMRVVSGRSLLLDGGGDGSPPRQFGDIVALNNALTEGPSAGSARVGTAQGFAVRVSEGGVVSDLSLHMVLEAGEHRGSSVTAKGRIDMDAGERESVVIGGTGRFRLARGYMVTKNYDYSLATGGILVLAVAAVAVAVGAATTTTTHTRFYMHDTVTASASGGGPAATAVRVVRGAAAAALPGDAVNRFGDLYAVDDPLTDGPDASSSAAVGRARGFYMFASRTDSALLFSATMEFTAGVHRGGAVSVLARDAILDEVRELPVVGGAGVLRGAAGYGLLRTHSFNATTNNAVLQIDMYLTV
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_11G007320 | OsN22_11G007320_02 | Chr11 | 6434487 | 6435433 | + | IsoSeq | ||
CDS seq | ATGCATTTATTTTGGGATAAAAGAGTATAT |
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Protein seq | MHLFWDKRVY |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 1.878412 | 8.329061 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0214900 | SBH | 0.341938 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10840 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0214900 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0007300 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007370 | SBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007190 | SBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007200 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007170 | RBH | 6.059134 | 0.0 | 15.975200 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0095200 | RBH | 0.214191 | 0.156146 | 0.526149 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007150 | RBH | 0.249806 | 0.0 | 0.743734 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0102000 | RBH | 4.9200665 | 0.013287 | 0.0461015 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007300 | SBH | 0.475911 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007160 | RBH | 0.000000 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007170 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007280 | RBH | 0.262758 | 0.0 | 2.832543 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007260 | RBH | 0.470701 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007300 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007150 | RBH | 0.567990 | 0.0 | 9.876303 |