Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsN22_09G017900 | OGI:09061370 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr09:22129529-22135585 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | AGTTCGAGCCCACGCCATCACGGCCTCGCCGATGCTCCCGTCGCCACCGGCACCGCCGCCGATCTCGCCGGCGCGGCTGCACAAGCTCGTGACCTCCCAGTCGGACCCGCTCCTCGCGCTCGAGCTAGTCACCGTCACCGCGCCGACCACCGCGCCCCACCCGTCGACGCTCCACGCGCTCGCGCTCCGCCTCTCCCGCCGCCGCGAACACCTCCCCCACGCGCTCGCGCTCCTGCGCCGCCTCCCGTCGCCGCCCTCCCCGCGGATCCTCCTCCCGCTGCTCCTCTCCGCGCTCCGCCTCCGCCGGCAGCCTCACCTCTTCCTCTCCACCTTCAACTCCCTCTTCGTCTCCGGCCCCAGCCCGTTGCCGCTCCACCCCGAGCTTCTCCTCCGCCTCCTCTCCGTTCTCTCCTCCACCGCTTCCTACTTCCCGTGCGCGCTACACCTCCTCCGCGACGTCTCCACCCGCCTTCCCCTCCCCGAGCCGCTCGTCCTCGCCTCGCACAACCTGCTCATCGAAGCCGCCACCCGCTCCGGCCACCTCGCCGTGTCAATCTCCCTCTTCCATCGCCTCCGCTCCCTCCATGTGTCTCCCAACGCCGAGACATACCGCATCCTGACCCAGTCACTCTGCCGCAGGGGCCAGGTCCACACTGCGGCCACCCTGCTCGACGAAATGCTCCACAGGGGCATCCCTGCTGACCCACTGGCATACACCACCGTGCTGAATGCGCTCTGCCGTAAGAAGCAGCTTCGAGAGGCTTACCGCTTGCTGTGCCTCAGGCGAGGCCGTGGGGTCTCACCTGACATTGTACATTACAACACGGTCATCGTCGGAGTGTGTCGTGAGGGACGGCCACTGGATGCCTGCAAGGTGTTCGGAGATATGAGGGAGAGTGGGTGCGCGCCAAATGCGGTGACATATACTGCGGTGGTGAATGGGTTGTGTGTGAATGGATTATATGACAAGGCAGAGGCATACCTTGATGATATGTTGGGCAAAGGGTTACTACCACATTTCTCTGTGTTACATTCAGTGATTAAGGGATGCTGTGCAGTTGGGAAGGTTAATGAGGCTGCAGGGATGATGACTCGAATGCTTGATCTTGGGATGGTTCCACATGCTGAGACCTGGAGTTCAGTGATCAGGAGTGTTTGTAGTGATGAGGATAATGTCGAGGTGGTTTTGTTGCAAGTGATGAAAGGAATAAAGCACCGCTCAAACATAAATTCAAGGAGTACCTGGACATGATATCATGTGGCATGGATGCAAGGAACACCTATTTTCTGGTGTGTTGTAACAATCAGTTTTGAAAGAAAACAGTAGATGATGTGCAAAATGTGGACCGCAACCATTTTTCTCATCGTATGCAGCTAATTTGATATTTGAGTTTATTTGTTTATATGCAGGTTAGGAGATATTGTTTGACTTCAACTAAGGTACACTATCCTGTTTCAAGAAAAAAAAAGCTATTGCCCTTAATTAAGCATGTAGCGCTATTGATATTGAGTTCTAGCACTGTTTTGATAGTACATTTTGTATGTAGATTCTGAATTTCTGATGCTTGTTAGTTAAAGACCATACTCTGTTCTAGTAGTAATTTTCAAATACATTTACTCTGAATCGAGTAGATCATTTACCTTTTCTTATGCCTCTTCAATTGTGCTTTCCTGCAGCTGCAACGGCAGCACCCAGATTCTGCATTCGCAGATCTTATAATCTGCCAAAGCCCAAAGCTTTGATGCCAGGATTCGTGGTTTTGTAGAAATGTGCAGTAAAAACCGAAGTCGTGGTTTTTTCGGCTGCCGAATCAAAGTGTAAGCTGTGGATTGGTTGTAGTGCGGGATGGTACTTTCTGGTTCTGCTGATTCAGAAAAGTGAAACATATGGTTTGCCTTAAAATAGACGCTAGTAAATGGAAAGAACAACTGCCTTTCAGTCCCAACTTCTTGAGGAGACCTGCACCTTTACTTATGTGGTATGTGTCAGATCATGAAGGTTTTAATTGGAAGGGATGAGATCGAGGTGTGTTTTATCAAGTTATGCTGTGGAAATGGGTATTAGAATCTGGTGTTAACATTCATATACAAGTAACATCGTGCGAAGTTATACTGTAATCTGTATTATGTAGTGCAAGAATCGCAAGTAATCACACTGGCAGTTGGCTTTAACATTAGCCTTTGTATCCTTTGCAGGTTACTCAGACACAATGCTGAAACTGCTACTTTTTGCTTTCGAAGATCTTAAGATGGTTTTGAAGTCTCAGGAGTATGATCTTCTCATAGGCTTGGGAAATGCTGAAGATGTTGTTCTCAAGCTTGTAAATGAGGTCACTATGCAAGGTTTATGTTGAGAATTGAGCTTAAGAGTTTATGCAAACCTTCACTGCTAGCCATCTAACATATCCAGATCTCCTGATTGCTTGCATTGATGGAGCATAACAGGTACAAGCGGGCCTCATTTTCACAGAAGAGGAAGTTGAGTACAGAGTGCGCAATGTTCTGGCCAGTGTTGAATCATCTCTCTCTAATGCATCATTCCTATCGGGAAACCCTCCTGAGATAGTGGTTTGGAGTGCCTCATTGTATGACTACAAGGTAATTTTTTATCTCAAGTTATCATTCCCTATTGCTATCCTCTAGCAACCTAATTATGTTTGGCATGCTAAAATCATTCCACCAGAATCCGAGGGAATTGTCAACATCACACAACCAATTTTTGAAGGAAAAATTACTGATGAACACACCTCTTGCTGCCCCGTCTTTACCTGCTCTGAACATAGAGATAGAGACAGGTGTATTTCAGTTCTCTTTTTTTTTTGGTTAGTGATTATATCCTTGATCATTTTTGGTGTGTGCATTGTGATACTTTGACAATTTCCTGTTCAGGTTCTCTCCCCACACTGGAAGAGCTAAAAGGGTTTCTTAAAGAGCATAGAACGTCAGAGGATAATTGGGTTCCTCTCACGAGCACATCAGCCAGATCTATTCTTAAAAAGACTCTCAGCCAGATAAAGGTCAAAACCGGTTAGGAGATATTTTTTAACTTCAACTAATATATGCTATCCTCTGTTGCAAGAAAAAAAAAGCAGTCGCCCTTAATTAATGCGATTCGTAGGACAGGAAAATCCTAATGCTTATGCAGCGCTATTGATATTGAGTTCTAGCACTGTTTTGGCAGTATATTTTGAAGGTTGATTCTGAATTTCTACTGCTTGTTAGTTAAAGACCATGCTTTGTTCTAGTAGGAATTTTCAAACACATTTACTCTGAATCCAGTTGATCATTTACTTTTTCTTATGCCTCTTCAATTGTGCTTTCCTGCAGCTGCAAACGGCAGCACCCAGATTCTGCATTCGCGGATCTGATAATCTGCCAAAGCCCAAAGCTTTTGGTTCACCTTGGTTCATGATATCTGGATTTTGTTAGACACCAGTTCTCTGTACTTTGTGGAAACTAGAATGTTTTGGCAGCAGGATAACTCAGCTGAGTGAAGGATCAGCATGGAGATCATCTCGCGGCAAATATGGGAAGCCCACTGGACGTTGGCTGAATTCCAACTGCTGTTGTCAAGGTGCATCTGATCGTCTCACGACAAGCATACACCATACATATCGTTGCAGGTGCAGACAAAGGTTTTCTGACTATTTGATGTCCTGATACATCTCGGCAAAGCTGCTGGGATCTGGATGGTTCACTTGCACGGCTTGCTGCATTTTTGTGCACCCACTGACCTCGTTGTCCTTGCTGTGCCTGGTGGTATGGTATCCTCTCCCTGTGACTGCATTGGTACTGCGGTACTGCCTCAGAGAAAGTTGTGTGCTGAAGTAGATAAATTTTTGTAATTCTAATTTCACTGGTGATGTACCTTTCAAGAATTCAAAATTACCAGCGATTACCGGTAACAGTGAACATGCTATGTATAAAGCTATCTTGTATAGACTTAGAACAAGCCCATCTTCATTCAGGAGGTGAAAAAAATGATGGATTGTTGAGATTTTAGATTTTAAAAAATGATTATGTACACGTATTGGAAATGCAAACTTGTAATCGTATTGTACTGATTATGTAATGCCATACGTTGTCCATTGACATTTTGACATTTGCTTATTCACTCTGGACTACTCGTATCGTACTGAATCATTTGCGCCTAATCGATTAGGCCATGTCTAAATCTTTGATGCAAATATCCCCAGGAATAGTTCAACTTCCTGCCAATTTCAGAAGAGAAAAAAAAGATTGGATAGGTTACGTCATTACACGGTTTGACTGCTATCACAGTAACCGTGTGGTTACCGTGAAAAGATATACCATGATTTTAAAAACTTAGATGAAAGAAAGTTACCATAACCGAAGCTAAACTGCAGCTCTCGTTTCCTCCTAGGGAAATTTAACTATTTGCCAGTGGCAACTCTCCATATGCCACTATTAGATTTTGCTTAACATATTTGGCACTAGAGAAAGATTACATCCCGCCACTTTCACTGAGTTGGAGCGCCACATCAGCATGCCAACGTGGACCGGCCTGGCGAAATTACCTTTTTGCCCTTGTGCAGAAACGAGAAACCGGAATCAGGAACCCTACCGCCGCCGCCGCCACCGCCTGGAACCCGCCCGCCGCCCGCCGCCGCTGCCTGGAACCCAACCACTGCCGCCGCCTGCGCCTTGTGCCTGGAGCCCACACGCGTCGCATCGTCCGGGACCTTGTGCCTGCCTTTCCGTACGAATCCACCCAATGCCTCGGCGGCGTCCGCGGCTGTCGTTCCTCGGCCTCACCCGCGCCTCTCCAGCTGCCGGGACGGCGACCTCGCCATCCTCCTCTCTGCCCTCCGCTCGCCGCCGGCGTCGCTCCCGCGCGCCCTCTCCAGTGCCTTCCCGTCCCCCTCCGGCTCCTTCCTCATCGGCAAGCTCCCTTCCCTCCTCCCGCTCCTCCCCTCCCCCCTCCGCTTCCTCCTGTGGCGCCTGCCCCCTCCTCGCCTCTGCCGTCCTCGTACGCCCTCTCCTCGCTCGCCGCCTCGCTCCCCGATCTCCCGTCCTCCGTGCCCCTCCTCCTCTCCTCCTCGCCGCAACCTCTCCCTCTCAGGCACTACGCCCTCCTCCTGACCATCTCCGCACACGCTGGACTATTCCCCGCCTCCCTCGCTCTCCTGCGGCACATGCGCTCCTTCGGCCTCGCCCCCGATGCTGCCTGCTTCCGCTCCGCCCTCCGCTCGGCTGCCTCTCCCGGCGATGTCTGCGCCGTTCTCGGTATCATGTCGGCGTGCGGTGTCTCGCCGAGCGTCCCACTGGTTGTGGCCTCGGTGCATAAGCTGGCAACCGCGGGGGACTTTGTCGGCGCCCGCCAGCTGATCGAGAAAATGCCGGAATTCGGGTGCGTGACCAATGTGCAGTTTCGGGGATGTGGATGCAGCGTTGGGGCTGGTGGAAGAGATGGAGGGTGGGAGCTTGGGTGCAGGGTGCGTGCCCAACGTGGTGTCGTATACGTGTTTGGTGAAATGCCTGTGTGGGAAAAAGAGGATGGGGGAGGCGCTGAGCTTGCTGGATAGGATGACAGGAAGAGGGGTGATGCCCAACCGGGTGTTTGTGCGAACGCTCGTCGGCGGGTTCTGTTCAGAGGAGATGGTCGCAGACGCTTATGCTGTGGTGGAGCGGGTGGTCAGCGATGGGAGTGTGTCGAGCGAGCAATGCTACAATGTGCTGCTTGTTTGCCTGTGGAGGGTTGGGATGGATGGCGAAGCTGAAGGGCTTGGGCAGAGGATGATGAAGAAAGGGGTGCGGCTGAGCCCTCTTGCGGCCAGTGTTATGGTCAGAGAGCTCTGCAATAGGAATAGGCTATTGGATGCTTGCTACTGGATAGGAGTCATGGAAGAGAACGGGGTGCTCTGTGACACTGATGTCTACAACGGTTTGTTGCTTAGGCTGTGTGTGGAAGGGCATGTTGGCGAGGCCTTGGCATTGGCTAAGAAGGTTGCCGAAAGGGGGATTCTCATAGAGGCCTCTTGTGCTGATTGTTTGACGGATTTGCTAAAGCAATATGCTGATGAGGAGCTAGCATAA
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CDS seq | ATGCTCCCGTCGCCACCGGCACCGCCGCCGATCTCGCCGGCGCGGCTGCACAAGCTCGTGACCTCCCAGTCGGACCCGCTCCTCGCGCTCGAGCTAGTCACCGTCACCGCGCCGACCACCGCGCCCCACCCGTCGACGCTCCACGCGCTCGCGCTCCGCCTCTCCCGCCGCCGCGAACACCTCCCCCACGCGCTCGCGCTCCTGCGCCGCCTCCCGTCGCCGCCCTCCCCGCGGATCCTCCTCCCGCTGCTCCTCTCCGCGCTCCGCCTCCGCCGGCAGCCTCACCTCTTCCTCTCCACCTTCAACTCCCTCTTCGTCTCCGGCCCCAGCCCGTTGCCGCTCCACCCCGAGCTTCTCCTCCGCCTCCTCTCCGTTCTCTCCTCCACCGCTTCCTACTTCCCGTGCGCGCTACACCTCCTCCGCGACGTCTCCACCCGCCTTCCCCTCCCCGAGCCGCTCGTCCTCGCCTCGCACAACCTGCTCATCGAAGCCGCCACCCGCTCCGGCCACCTCGCCGTGTCAATCTCCCTCTTCCATCGCCTCCGCTCCCTCCATGTGTCTCCCAACGCCGAGACATACCGCATCCTGACCCAGTCACTCTGCCGCAGGGGCCAGGTCCACACTGCGGCCACCCTGCTCGACGAAATGCTCCACAGGGGCATCCCTGCTGACCCACTGGCATACACCACCGTGCTGAATGCGCTCTGCCGTAAGAAGCAGCTTCGAGAGGCTTACCGCTTGCTGTGCCTCAGGCGAGGCCGTGGGGTCTCACCTGACATTGTACATTACAACACGGTCATCGTCGGAGTGTGTCGTGAGGGACGGCCACTGGATGCCTGCAAGGTGTTCGGAGATATGAGGGAGAGTGGGTGCGCGCCAAATGCGGTGACATATACTGCGGTGGTGAATGGGTTGTGTGTGAATGGATTATATGACAAGGCAGAGGCATACCTTGATGATATGTTGGGCAAAGGGTTACTACCACATTTCTCTGTGTTACATTCAGTGATTAAGGGATGCTGTGCAGTTGGGAAGGTTAATGAGGCTGCAGGGATGATGACTCGAATGCTTGATCTTGGGATGGTTCCACATGCTGAGACCTGGAGTTCAGTGATCAGGAGTGTTTGTAGTGATGAGGATAATGTCGAGGTGGTTTTGTTGCAAGTGATGAAAGGAATAAAGCACCGCTCAAACATAAATTCAAGGAGTTACTCAGACACAATGCTGAAACTGCTACTTTTTGCTTTCGAAGATCTTAAGATGGTTTTGAAGTCTCAGGAGTATGATCTTCTCATAGGCTTGGGAAATGCTGAAGATGTTGTTCTCAAGCTTGTAAATGAGGTACAAGCGGGCCTCATTTTCACAGAAGAGGAAGTTGAGTACAGAGTGCGCAATGTTCTGGCCAGTGTTGAATCATCTCTCTCTAATGCATCATTCCTATCGGGAAACCCTCCTGAGATAGTGGTTTGGAGTGCCTCATTGTATGACTACAAGAATCCGAGGGAATTGTCAACATCACACAACCAATTTTTGAAGGAAAAATTACTGATGAACACACCTCTTGCTGCCCCGTCTTTACCTGCTCTGAACATAGAGATAGAGACAGGTTCTCTCCCCACACTGGAAGAGCTAAAAGGGTTTCTTAAAGAGCATAGAACGTCAGAGGATAATTGGGTTCCTCTCACGAGCACATCAGCCAGATCTATTCTTAAAAAGACTCTCAGCCAGATAAAGGTCAAAACCGCCCACACGCGTCGCATCGTCCGGGACCTTGTGCCTGCCTTTCCGTACGAATCCACCCAATGCCTCGGCGGCGTCCGCGGCTGTCGTTCCTCGGCCTCACCCGCGCCTCTCCAGCTGCCGGGACGGCGACCTCGCCATCCTCCTCTCTGCCCTCCGCTCGCCGCCGGCTGCCTTCCCGTCCCCCTCCGGCTCCTTCCTCATCGGCAAGCTCCCTTCCCTCCTCCCGCTCCTCCCCTCCCCCCTCCGCTTCCTCCTGTGGCGCCTGCCCCCTCCTCGCCTCTGCCGTCCTCGTACGCCCTCTCCTCGCTCGCCGCCTCGCTCCCCGATCTCCCGTCCTCCGTGCCCCTCCTCCTCTCCTCCTCGCCGCAACCTCTCCCTCTCAGGCACTACGCCCTCCTCCTGACCATCTCCGCACACGCTGGACTATTCCCCGCCTCCCTCGCTCTCCTGCGGCACATGCGCTCCTTCGGCCTCGCCCCCGATGCTGCCTGCTTCCGCTCCGCCCTCCGCTCGGCTGCCTCTCCCGGCGATGTCTGCGCCGTTCTCGGTATCATGTCGGCGTGCGGTGTCTCGCCGAGCGTCCCACTGGTTGTGGCCTCGGTGCATAAGCTGGCAACCGCGGGGGACTTTGTCGGCGCCCGCCAGCTGATCGAGAAAATGCCGGAATTCGGTTTCGGGGATGTGGATGCAGCGTTGGGGCTGGTGGAAGAGATGGAGGGTGGGAGCTTGGGTGCAGGGTGCGTGCCCAACGTGGTGTCGTATACGTGTTTGGTGAAATGCCTGTGTGGGAAAAAGAGGATGGGGGAGGCGCTGAGCTTGCTGGATAGGATGACAGGAAGAGGGGTGATGCCCAACCGGGTGTTTGTGCGAACGCTCGTCGGCGGGTTCTGTTCAGAGGAGATGGTCGCAGACGCTTATGCTGTGGTGGAGCGGGTGGTCAGCGATGGGAGTGTGTCGAGCGAGCAATGCTACAATGTGCTGCTTGTTTGCCTGTGGAGGGTTGGGATGGATGGCGAAGCTGAAGGGCTTGGGCAGAGGATGATGAAGAAAGGGGTGCGGCTGAGCCCTCTTGCGGCCAGTGTTATGGTCAGAGAGCTCTGCAATAGGAATAGGCTATTGGATGCTTGCTACTGGATAGGAGTCATGGAAGAGAACGGGGTGCTCTGTGACACTGATGTCTACAACGGTTTGTTGCTTAGGCTGTGTGTGGAAGGGCATGTTGGCGAGGCCTTGGCATTGGCTAAGAAGGTTGCCGAAAGGGGGATTCTCATAGAGGCCTCTTGTGCTGATTGTTTGACGGATTTGCTAAAGCAATATGCTGATGAGGAGCTAGCATAA
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Protein seq | MLPSPPAPPPISPARLHKLVTSQSDPLLALELVTVTAPTTAPHPSTLHALALRLSRRREHLPHALALLRRLPSPPSPRILLPLLLSALRLRRQPHLFLSTFNSLFVSGPSPLPLHPELLLRLLSVLSSTASYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHRLRSLHVSPNAETYRILTQSLCRRGQVHTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLRRGRGVSPDIVHYNTVIVGVCREGRPLDACKVFGDMRESGCAPNAVTYTAVVNGLCVNGLYDKAEAYLDDMLGKGLLPHFSVLHSVIKGCCAVGKVNEAAGMMTRMLDLGMVPHAETWSSVIRSVCSDEDNVEVVLLQVMKGIKHRSNINSRSYSDTMLKLLLFAFEDLKMVLKSQEYDLLIGLGNAEDVVLKLVNEVQAGLIFTEEEVEYRVRNVLASVESSLSNASFLSGNPPEIVVWSASLYDYKNPRELSTSHNQFLKEKLLMNTPLAAPSLPALNIEIETGSLPTLEELKGFLKEHRTSEDNWVPLTSTSARSILKKTLSQIKVKTAHTRRIVRDLVPAFPYESTQCLGGVRGCRSSASPAPLQLPGRRPRHPPLCPPLAAGCLPVPLRLLPHRQAPFPPPAPPLPPPLPPVAPAPSSPLPSSYALSSLAASLPDLPSSVPLLLSSSPQPLPLRHYALLLTISAHAGLFPASLALLRHMRSFGLAPDAACFRSALRSAASPGDVCAVLGIMSACGVSPSVPLVVASVHKLATAGDFVGARQLIEKMPEFGFGDVDAALGLVEEMEGGSLGAGCVPNVVSYTCLVKCLCGKKRMGEALSLLDRMTGRGVMPNRVFVRTLVGGFCSEEMVADAYAVVERVVSDGSVSSEQCYNVLLVCLWRVGMDGEAEGLGQRMMKKGVRLSPLAASVMVRELCNRNRLLDACYWIGVMEENGVLCDTDVYNGLLLRLCVEGHVGEALALAKKVAERGILIEASCADCLTDLLKQYADEELA |
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Function | Pentatricopeptide repeat-containing protein At4g01400, mitochondrial [UniProtKB/Swiss-Prot:Q8LDU5] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_09G017900 | OsN22_09G017900_01 | Chr09 | 22129529 | 22135585 | + | NAM | ||
CDS seq | ATGCTCCCGTCGCCACCGGCACCGCCGCCGATCTCGCCGGCGCGGCTGCACAAGCTCGTGACCTCCCAGTCGGACCCGCTCCTCGCGCTCGAGCTAGTCACCGTCACCGCGCCGACCACCGCGCCCCACCCGTCGACGCTCCACGCGCTCGCGCTCCGCCTCTCCCGCCGCCGCGAACACCTCCCCCACGCGCTCGCGCTCCTGCGCCGCCTCCCGTCGCCGCCCTCCCCGCGGATCCTCCTCCCGCTGCTCCTCTCCGCGCTCCGCCTCCGCCGGCAGCCTCACCTCTTCCTCTCCACCTTCAACTCCCTCTTCGTCTCCGGCCCCAGCCCGTTGCCGCTCCACCCCGAGCTTCTCCTCCGCCTCCTCTCCGTTCTCTCCTCCACCGCTTCCTACTTCCCGTGCGCGCTACACCTCCTCCGCGACGTCTCCACCCGCCTTCCCCTCCCCGAGCCGCTCGTCCTCGCCTCGCACAACCTGCTCATCGAAGCCGCCACCCGCTCCGGCCACCTCGCCGTGTCAATCTCCCTCTTCCATCGCCTCCGCTCCCTCCATGTGTCTCCCAACGCCGAGACATACCGCATCCTGACCCAGTCACTCTGCCGCAGGGGCCAGGTCCACACTGCGGCCACCCTGCTCGACGAAATGCTCCACAGGGGCATCCCTGCTGACCCACTGGCATACACCACCGTGCTGAATGCGCTCTGCCGTAAGAAGCAGCTTCGAGAGGCTTACCGCTTGCTGTGCCTCAGGCGAGGCCGTGGGGTCTCACCTGACATTGTACATTACAACACGGTCATCGTCGGAGTGTGTCGTGAGGGACGGCCACTGGATGCCTGCAAGGTGTTCGGAGATATGAGGGAGAGTGGGTGCGCGCCAAATGCGGTGACATATACTGCGGTGGTGAATGGGTTGTGTGTGAATGGATTATATGACAAGGCAGAGGCATACCTTGATGATATGTTGGGCAAAGGGTTACTACCACATTTCTCTGTGTTACATTCAGTGATTAAGGGATGCTGTGCAGTTGGGAAGGTTAATGAGGCTGCAGGGATGATGACTCGAATGCTTGATCTTGGGATGGTTCCACATGCTGAGACCTGGAGTTCAGTGATCAGGAGTGTTTGTAGTGATGAGGATAATGTCGAGGTGGTTTTGTTGCAAGTGATGAAAGGAATAAAGCACCGCTCAAACATAAATTCAAGGAGTTACTCAGACACAATGCTGAAACTGCTACTTTTTGCTTTCGAAGATCTTAAGATGGTTTTGAAGTCTCAGGAGTATGATCTTCTCATAGGCTTGGGAAATGCTGAAGATGTTGTTCTCAAGCTTGTAAATGAGGTACAAGCGGGCCTCATTTTCACAGAAGAGGAAGTTGAGTACAGAGTGCGCAATGTTCTGGCCAGTGTTGAATCATCTCTCTCTAATGCATCATTCCTATCGGGAAACCCTCCTGAGATAGTGGTTTGGAGTGCCTCATTGTATGACTACAAGAATCCGAGGGAATTGTCAACATCACACAACCAATTTTTGAAGGAAAAATTACTGATGAACACACCTCTTGCTGCCCCGTCTTTACCTGCTCTGAACATAGAGATAGAGACAGGTTCTCTCCCCACACTGGAAGAGCTAAAAGGGTTTCTTAAAGAGCATAGAACGTCAGAGGATAATTGGGTTCCTCTCACGAGCACATCAGCCAGATCTATTCTTAAAAAGACTCTCAGCCAGATAAAGGTCAAAACCGCCCACACGCGTCGCATCGTCCGGGACCTTGTGCCTGCCTTTCCGTACGAATCCACCCAATGCCTCGGCGGCGTCCGCGGCTGTCGTTCCTCGGCCTCACCCGCGCCTCTCCAGCTGCCGGGACGGCGACCTCGCCATCCTCCTCTCTGCCCTCCGCTCGCCGCCGGCTGCCTTCCCGTCCCCCTCCGGCTCCTTCCTCATCGGCAAGCTCCCTTCCCTCCTCCCGCTCCTCCCCTCCCCCCTCCGCTTCCTCCTGTGGCGCCTGCCCCCTCCTCGCCTCTGCCGTCCTCGTACGCCCTCTCCTCGCTCGCCGCCTCGCTCCCCGATCTCCCGTCCTCCGTGCCCCTCCTCCTCTCCTCCTCGCCGCAACCTCTCCCTCTCAGGCACTACGCCCTCCTCCTGACCATCTCCGCACACGCTGGACTATTCCCCGCCTCCCTCGCTCTCCTGCGGCACATGCGCTCCTTCGGCCTCGCCCCCGATGCTGCCTGCTTCCGCTCCGCCCTCCGCTCGGCTGCCTCTCCCGGCGATGTCTGCGCCGTTCTCGGTATCATGTCGGCGTGCGGTGTCTCGCCGAGCGTCCCACTGGTTGTGGCCTCGGTGCATAAGCTGGCAACCGCGGGGGACTTTGTCGGCGCCCGCCAGCTGATCGAGAAAATGCCGGAATTCGGTTTCGGGGATGTGGATGCAGCGTTGGGGCTGGTGGAAGAGATGGAGGGTGGGAGCTTGGGTGCAGGGTGCGTGCCCAACGTGGTGTCGTATACGTGTTTGGTGAAATGCCTGTGTGGGAAAAAGAGGATGGGGGAGGCGCTGAGCTTGCTGGATAGGATGACAGGAAGAGGGGTGATGCCCAACCGGGTGTTTGTGCGAACGCTCGTCGGCGGGTTCTGTTCAGAGGAGATGGTCGCAGACGCTTATGCTGTGGTGGAGCGGGTGGTCAGCGATGGGAGTGTGTCGAGCGAGCAATGCTACAATGTGCTGCTTGTTTGCCTGTGGAGGGTTGGGATGGATGGCGAAGCTGAAGGGCTTGGGCAGAGGATGATGAAGAAAGGGGTGCGGCTGAGCCCTCTTGCGGCCAGTGTTATGGTCAGAGAGCTCTGCAATAGGAATAGGCTATTGGATGCTTGCTACTGGATAGGAGTCATGGAAGAGAACGGGGTGCTCTGTGACACTGATGTCTACAACGGTTTGTTGCTTAGGCTGTGTGTGGAAGGGCATGTTGGCGAGGCCTTGGCATTGGCTAAGAAGGTTGCCGAAAGGGGGATTCTCATAGAGGCCTCTTGTGCTGATTGTTTGACGGATTTGCTAAAGCAATATGCTGATGAGGAGCTAGCATAA
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Protein seq | MLPSPPAPPPISPARLHKLVTSQSDPLLALELVTVTAPTTAPHPSTLHALALRLSRRREHLPHALALLRRLPSPPSPRILLPLLLSALRLRRQPHLFLSTFNSLFVSGPSPLPLHPELLLRLLSVLSSTASYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHRLRSLHVSPNAETYRILTQSLCRRGQVHTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLRRGRGVSPDIVHYNTVIVGVCREGRPLDACKVFGDMRESGCAPNAVTYTAVVNGLCVNGLYDKAEAYLDDMLGKGLLPHFSVLHSVIKGCCAVGKVNEAAGMMTRMLDLGMVPHAETWSSVIRSVCSDEDNVEVVLLQVMKGIKHRSNINSRSYSDTMLKLLLFAFEDLKMVLKSQEYDLLIGLGNAEDVVLKLVNEVQAGLIFTEEEVEYRVRNVLASVESSLSNASFLSGNPPEIVVWSASLYDYKNPRELSTSHNQFLKEKLLMNTPLAAPSLPALNIEIETGSLPTLEELKGFLKEHRTSEDNWVPLTSTSARSILKKTLSQIKVKTAHTRRIVRDLVPAFPYESTQCLGGVRGCRSSASPAPLQLPGRRPRHPPLCPPLAAGCLPVPLRLLPHRQAPFPPPAPPLPPPLPPVAPAPSSPLPSSYALSSLAASLPDLPSSVPLLLSSSPQPLPLRHYALLLTISAHAGLFPASLALLRHMRSFGLAPDAACFRSALRSAASPGDVCAVLGIMSACGVSPSVPLVVASVHKLATAGDFVGARQLIEKMPEFGFGDVDAALGLVEEMEGGSLGAGCVPNVVSYTCLVKCLCGKKRMGEALSLLDRMTGRGVMPNRVFVRTLVGGFCSEEMVADAYAVVERVVSDGSVSSEQCYNVLLVCLWRVGMDGEAEGLGQRMMKKGVRLSPLAASVMVRELCNRNRLLDACYWIGVMEENGVLCDTDVYNGLLLRLCVEGHVGEALALAKKVAERGILIEASCADCLTDLLKQYADEELA
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.083014 | 0.281074 | 0.114024 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0532800 | RBH | 1.108210 | 0.662503 | 0.211078 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g36230 | SBH | 0.972840 | 0.455668 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os09g0532800 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0017560 | RBH | 0.000000 | 0.0 | 1.166371 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0017610 | SBH | 0.087690 | 0.367034 | 0.653327 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0017840 | RBH | 0.0 | 0.000000 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0017620 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0017760 | RBH | 0.428946 | 7.669281 | 4.833662 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0350200 | SBH | 10.3789475 | 3.431774 | 3.00867 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0017600 | RBH | 0.107269 | 0.0 | 0.237876 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0338400 | SBH | 0.199621 | 0.5365815 | 0.3881265 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0017630 | SBH | 0.067849 | 0.049758 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0017410 | SBH | 0.298773 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0017460 | RBH | 1.308016 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0017380 | RBH | 0.0 | 0.0 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0017520 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G022300 | RBH | 0.071103 | 0.403367 | 0.885096 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0017740 | SBH | 4.034605 | 3.038103 | 3.714351 |