Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_08G006360 | OGI:08015590 | 4/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr08:5697152-5699347 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTATGTCATGAAATTGCTTTTCCCCTGATGACATGATTGAGAAAGTTGTTTGACAGCTATAATTCTACCATCAGGTAGCTTACCCTGCTAAAGAAAGATCCCTGAGTTACATACATATTTTGATTATACGCGAGTTGAAATAATTGCACTTAGTACACAATATGGTAAATCTTCATAGATAGGCTGATGAGTTGTGGGAACCACTAACCTTATATTCTGGCCCATATCTGCCGGGTGGGCCTAATGGGCGATCAATCGCCAGGCGATCGCCCAAGCGATCAGATCCGCCCCCCTCCCCCTATAGGCAATACCTCCTCTCACTTCTCCTCCTTCCTCCTCTCCTTCTTCTCTTCCTACTACAGTACACAACAAAATCTTTTTAAAAAAACAAAAGTTAGAAAAATTTGTGTATAGAAATACTATATATAAAAAATTTGAATTCAAATTCAAATTTGAATCGGGTATATAAACTTTTGACTTATAAACTTTGGGTTTATAAACTTTAGATGTATAGAAATAATATATATAGAAAATATTTGAATTCAAATTCAACTTTAAATCGGATATAATTCAAATTCAAATTTGAAACGGGTATGTAAACTTTTGACTTATAAACTTTGGATCTATAAACTTTAGGTGTATAGAAATACTATATATAGAAAATATTTGAATTCAAATTCAAATTTGAATCAGATATAATTCAAATTCAAATTTGAAACGGGTATATAAACTTTTGACTTATAAACTTTAGGTCTATAAACTTTAGATGTATAGAAATACTATATATGAAAAATATTTGAATTCAAATTCAAATTTGAATCGGATATATAAAATTTTAACTTATAAATTTTGGGTCTCTAAACTTTAGATGTGTAAACTTGAGGTGTATAAACTTTAGGTGTATAAATTTACTAAAATAGGAAAGTAATGCGGTACCTAAAAAGGAAACTAGGTAGAGGAAGGGAGGGGGAGGGGGGGCGAATTGATCGCTACCCCCATTAGCATTTCTGATATCCGCCTTCTCCAATCACGTTTTGAGAACTGAAATGTCAGTAGCTAATTTCAGTTCTGCATTAATGAAGATATTAGGCCTTCCAATCAGGTTATATAGTTCTGCATTCATTTCAGGGAACATGGGAAAGAATAAATTATTTTAAAATTTTGATACTGAAAGAGCTGCTGATCCTAAAACTGATGCACCAATTACTATGCCAGCAATTGCACCAGCTTTGATTTACTCTTCTTTTTTTGGAACTCCATTTCTCACAGTAGGAGTATAATCTGGAAAATGGGTTTTAGTAATCAGAAAGACTATAATATGTTCCTCAAGTTAACTAATTCTAGTATTGAGCTTACTTTGGAGTGGTACTTAGTGTAGAGATCATCGGTCCGTAGTAACCTTGAGCAGAAATGCAACAAGTAACCTTGCCAGCCCAAAACAGATGTATCTCAAGGAAGTTTTTTTTGACACAGTTCCGTTGTATCTTTTGTAAACTGCAGTAAGGGCCTGTTTAGATTCCCTGGCAAAATTTTACACCCTGTTACATTGAATATTTGGACACATGTATGGAGTATTAAATATAAAAAAATAACTAATTACACAGATTGCGTGTAAATTACGAGACGAATCTTTTAAGCCTAATTGTGCCATGATTTGACAATGTGGTGCTACAGTAAACATTTGCTAATGACAGATTAATTAGGCTTAATAAATTCGTCTCGCCGTTTACAGGCGGATTCTGTAATTTGTTTTGTTATTAGACTACATTAAAAACTTTAAATTTGTTCCGTATATCCGATGTGACACGCCAAAACATTACTCCCCTGGATCTAAACACAGTCTAAAAGATTTTCCGCCAGCTGTTCTCCTTATATCAAAGTTCTTTTCTTTCAAATCACCCTATTCAAATGCCTAAGTTAGACAAACAAATAATGCTAAGGAAGGGTAAAAACTAGGTAAACAAATTACTGTATTATGTGCTCAATATATACCTGGACATATATGTCAGAAACTCTCCTTCCAATGCTTTGCCAAGTCTGTGTGTCTGGAAAAGCAAACTTTGCAAATTGAAGAAGAACAGTGTAATTTCCATCCTCAAGCCCTAGGCCATAGTATCTAAGGGACGATGGTGAGTCTGGAACAATTCTGAATTCATCGCATTTTGAAACTTTGGAACAATTCTGAATTCACCGCAT
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| CDS seq | ATGCGAATTGTTCCAGACTCACCATCGTCCCTTAGATACTATGGCCTAGGGCTTGAGGATGGAAATTACACTGTTCTTCTTCAATTTGCAAAGTTTGCTTTTCCAGACACACAGACTTGGCAAAGCATTGGAAGGAGAGTTTCTGACATATATGTCCAGGGTAAGCTACCTGATGGTAGAATTATAGCTGTCAAACAACTTTCTCAATCATGTCATCAGGGGAAAAGCAATTTCATGACATAA |
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| Protein seq | MRIVPDSPSSLRYYGLGLEDGNYTVLLQFAKFAFPDTQTWQSIGRRVSDIYVQGKLPDGRIIAVKQLSQSCHQGKSNFMT |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 [UniProtKB/Swiss-Prot:C0LGH3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_08G006360 | OsN22_08G006360_01 | Chr08 | 5697152 | 5699347 | - | NAM | ||
| CDS seq | ATGCGAATTGTTCCAGACTCACCATCGTCCCTTAGATACTATGGCCTAGGGCTTGAGGATGGAAATTACACTGTTCTTCTTCAATTTGCAAAGTTTGCTTTTCCAGACACACAGACTTGGCAAAGCATTGGAAGGAGAGTTTCTGACATATATGTCCAGGGTAAGCTACCTGATGGTAGAATTATAGCTGTCAAACAACTTTCTCAATCATGTCATCAGGGGAAAAGCAATTTCATGACATAA
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| Protein seq | MRIVPDSPSSLRYYGLGLEDGNYTVLLQFAKFAFPDTQTWQSIGRRVSDIYVQGKLPDGRIIAVKQLSQSCHQGKSNFMT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0202300 | SBH | 1.291855 | 0.929487 | 0.530938 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g10250 | SBH | 0.379814 | 0.094767 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0202300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0006570 | SBH | 0.166079 | 1.160552 | 0.314576 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0006660 | SBH | 0.759480 | 0.000000 | 2.478993 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0006550 | SBH | 0.144151 | 0.267361 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0006530 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0091400 | SBH | 10.8169235 | 14.028789 | 0.731616 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0006310 | SBH | 0.312493 | 0.230578 | 0.308257 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0093000 | SBH | 0 | 3.415315 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0006250 | SBH | 0.020270 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0006250 | SBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0006340 | SBH | 0.000000 | 4.792430 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0006500 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0006350 | SBH | 0.000000 | 3.166907 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0006220 | RBH | 0.0 | 0.0 | 0.0 |
