Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsN22_04G030120		OGI:04100530 \| 16/16			N22 \| OsN22RS2 \| Gramene(+IsoSeq)			Chr04:33635912-33639819		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		PSKR2, OsPSKR2, OsPSKR11, PSKR11
DNA seq		AGCACTAGCTGGAGCAAATCACTGAAAACAAATGCCCCACAAAAGTTCATTCATACCATAGCAGTAGCTGAAATTACAGAACATACAATAAATCTGTAGAAAAGCCGGTTATGTAACTGCTAGGGTGTTATCCTGAGGGTTTAAACCTACAATGCATTTTTTACATTGTGGTGATCTTGCAACCACCTTATGAAGAAAGGAAAGAGGATGATATGAACTATTACTTGAAGGGTGGCATGAGAAGGAAATTGAACTCTTGGCATTTCACGCTATGTAAATATTATTTACAGAACTAATCATCTTAAGAAACTATCAGGATGGATCTTGATCGATCAAACTGAAACCATTTAAGAACTTGACTGAACCTTAACCTTCAGCGATATGGTCAAGCCATTCGACTAGCTGCTGCGATGTTGGTCTTGACTTAGGAGCAGCAGTCACACAAAGCAGTGCTATCTCCAGGATTCTGATCAACTGGCTTTCATTCTCCTTGTCATATATGGTTGGATCAAATACTTCAGTTTCCCTGTCTTCCTTCTTCATCTGAAGCACCCAGGACACTACATCTCTGCTCCCTTTTGGCCTGCACATGTCCACAGGCCGCCGCCCAGTGAGTAGCTCCAGAAGAACAATTCCAAAGCTGTACACATCACCCTTGTAAGTAGCCACAGGTGACTGCCCATATTCAGGTGGAATGTAGCCCAAGGTTCCCACTACATCTGTTGTGACATGCGTCTCGTATGCGCATATGAGCCTTGCCAACCCGAAATCAGCCAAATGAGCTTCAAAGTTCTCATCCAAGAGGATATTGCTTGACTTGATATCTCGGTGCAATATATGGGGCTCACACGACAGGTGCAAGTATGCCAGCCCCCTTGCCGATCCCTGTGCAATCCGTAGCCTCTTCTGCCAATCCAGCAGGGCACCACCATCAGCCCTCTCATGAAGCCAGTAATCCAAGCTGCCATTCTCCATGTATGCATAGATCAGTAGTCTGTCATTGCCTATCTTGCAATAGCCTTCTAGCAGAACAAGGTTGTCATGCTGGGCACGTGATAGTGTTTCCACTTCAGCTTGAAACTCCCGCTCAATCTGAGAGTAATCGCCTGAAAGCCGCTTGATTGCAACTCTCCTCCCATCTGGTAGTGTTGACTTGTAAACAAGTCCAAAACCACCACAACCAACTATATAGGCTTGATCAAAGTTGTTGGTTGACTTCAATATATCTTCAATACCAAGATCCTTGTTGTTCTGGAAAAGCAGCACCAAGCTTGAGTTCGGAGACTCTGAGCAGTCATCAGCATTCGCTACTGCCTTTGGATTATGCTCCTGCATTCTTGAATGAATAATCCTTGATATAACCACAGAAGCAATACACAAGACAAAAATAACCCCCACTGCAGTACCAAGTCCAAGGGCCACAAGGGTTGCTTTGTTCTTCTTACGATGTGGTGCTTCCGTATCAGGAGAATTCTTTGTGCTGGAGGAATTCCGAGGAAAGTGTAGTGCGTGATTGCCTGCAAAATCCTCACTAGTGAACGTGGAGAATTGGCCTCCTGCCGGGATATCTCCAGACAAATTGTTGTACGAAACATCAAACTTGGACAGAAAGTTCAGCTTCGTTAGAGATGATGGTATGCTCCCACTGAGATCATTGTGGGCTAAATCCAATATTTCCAAGCTCGACATATTTGATAACTCATCAGGAATTGGCCCAGAAAAATTGTTAAAGCTCAAGTCCAGCACATGAAGCTTCACTAGACGGCCAAAGGCTGGCAATATTGGCCCAACAAGCTTGTTATTTGAGAGGATCAGTGATGACGGGAAGCTACTGAGTTGGTTGTACTGCAAGCCTTTACCAGTGGAAGTCGAATTCTTCTTGACGAATAATGGGAGGTCTCCTGTTGACGCCTGCCCACTTGAGCCATTACTTGAAATTAAACTCTTCATCTGTGTAAAGGTTGCAGGAAGCTCCCCACTGAATGAGTTGTTGGACAGATCGATGTAGAAAAGACTGTCGAGGTTGCCTAACCATGGCAGGATCTCCCCATGCAAATTGTTCCATGAAATATCCAGCACACTGAGGCTCTTCAAGCTCTGCAGCCAAGGTGGAACCGTGCCCAAGAGTGCACAGTTCGCCAGGACAAGAACCTGCATTCTCTTGAACCCTTCGATGCCGTCCATTGGCATGGTTTCACCACCACGGAAGTTATTGGTGAGCACCAAGCTAGTTAAGTTGGGCAGGTGCTGCAAGACTTGCAATGCTGATGACAAGTTGGTAAAACCATTCCCCGTAAGAGAAAGGTATGACAGTGATGTCAAATTCTTGAAGCTCTCCGGTAGCTCCCCCTGAAGCTTGTTCCTTGCAAGGTTCAGCGTCCTCAACTCAGTGCACGAGGCAAGGCGAGGCGGTATAGCACCACGCAGCTTGTTGGTCCCAGCATCAAAGTTGTTCAGCCTCGTGAGCAATCTGCAGTCAATGGTAATCTCACCGGACAGCGAATTGTTCCTCAGGCTGACCACTCTAAGCATCGGGCAGCTCGACAGGGATAGAGGCAATGTGCCATTCAATTGGTTGGAAGCCAAGTTTAAGGACTCCAAGCTCCTCAATTTCCCAAACACATCAGGGATATTGCCATTGAACATGTTATATGACAAGTCAATCTGCGTAATCTCAGTGAGGTTACCGAGGTCGTCGTCGAGGCTGCCGGAGAGCTTATTCTCCTGCAAACTTAGTTTTCTCAGCGCTGGCATCATGTACAGATCTTTGGGGAGGCTCCCAGTAAGGCCATTGCCATCAAGGAAGAGGTCGTTGAGCAGCTTGCACTGACCAAAGCCGGCCGGCACATCACCAGAGAAGGCATTCGCCGAGAACCGCAGGACCTTGACCGGCGAAGCGCAGAGCGCGGTGACGTTGATGCCGCCGGAGAAGGCGTTGCCGGTGATATCAAGAACCGTCAGGTTCGGCGCGCCGGGGAACGCGGGGTGCGGCCCGGTGAACCCGTTGGAGGAGACGTTCACCACCTCGATCGCCGGGAAGCCGCCCGCCGGGAACGCGCCGGCGAGGCCGTTCGCGCTGAGGTCGAGGCGCCGCAGGCTCGGCAGCCGGCCGAGCCGCGCCACCGCCTCGCCGCCGCGAAGCGAGTTCCGGGAGAGGCTCCGGTTGGAGAGATCCAGCGCCACCACCCTCCCGAGATCACAGGACACGCCCGTCCACGAGCAGCAGGCGGCGTCGCCGGGGCCCCACCCGACCATCCCGGCGGCCTTCGTGTCCAGGCCATCGGAGAAGGCCAGGAGCGCCGCCAGGTCGGTGGGGTCGCACGTCTGGCTCTCGGAGCGGCCGCCATGGACGTGGAGCAGAACGGACACCACCAAGAAATGGAAGAAGCAGTAGTAACCTCTCATCTCCGCCGTCGACGGAATCAGAAAATGAACCCCTTCTTCCTGCAGGGCATGAACAACTTCAAGAATCCAGGAAAACAACTCACACCACCTTGCAACGAGGCAGCATGAATCTAATCACCAAGAACGAACACGCTCGCAAGAGTCAAGACTCCTCCTCTGGGCAAGAAATCCAGGAGCGCAAGAACGGGAAATTCCCTCTCATTCCGTCCGCCACATGAGCTGGATCGCAAGATTGTGAGGCGCCGAAAGAGGAGGATGGCATCACAGGAGGAAGAAGAAGAAGAGGAGGAGAGTGGGGGAAAGTCAGAGGAGAGAAAGAGACGGTTGGTTTTGACTCCAATGCGGCTCTCATCAGCAGCCGTTCTTCTTCCTCCCAACCTCTTCACCAGATTTGTTTATTCATTCATCGCAAACTTAAAAAAAATCAATTTCCTCTCTCTCTCTCTCTAAAGCTTTCTCGTGTCCTCTTTTCTCTCACTCGCAGACTCGCTCACTGGTAGGCC More
CDS seq		ATGAGAGGTTACTACTGCTTCTTCCATTTCTTGGTGGTGTCCGTTCTGCTCCACGTCCATGGCGGCCGCTCCGAGAGCCAGACGTGCGACCCCACCGACCTGGCGGCGCTCCTGGCCTTCTCCGATGGCCTGGACACGAAGGCCGCCGGGATGGTCGGGTGGGGCCCCGGCGACGCCGCCTGCTGCTCGTGGACGGGCGTGTCCTGTGATCTCGGGAGGGTGGTGGCGCTGGATCTCTCCAACCGGAGCCTCTCCCGGAACTCGCTTCGCGGCGGCGAGGCGGTGGCGCGGCTCGGCCGGCTGCCGAGCCTGCGGCGCCTCGACCTCAGCGCGAACGGCCTCGCCGGCGCGTTCCCGGCGGGCGGCTTCCCGGCGATCGAGGTGGTGAACGTCTCCTCCAACGGGTTCACCGGGCCGCACCCCGCGTTCCCCGGCGCGCCGAACCTGACGGTTCTTGATATCACCGGCAACGCCTTCTCCGGCGGCATCAACGTCACCGCGCTCTGCGCTTCGCCGGTCAAGGTCCTGCGGTTCTCGGCGAATGCCTTCTCTGGTGATGTGCCGGCCGGCTTTGGTCAGTGCAAGCTGCTCAACGACCTCTTCCTTGATGGCAATGGCCTTACTGGGAGCCTCCCCAAAGATCTGTACATGATGCCAGCGCTGAGAAAACTAAGTTTGCAGGAGAATAAGCTCTCCGGCAGCCTCGACGACGACCTCGGTAACCTCACTGAGATTACGCAGATTGACTTGTCATATAACATGTTCAATGGCAATATCCCTGATGTGTTTGGGAAATTGAGGAGCTTGGAGTCCTTAAACTTGGCTTCCAACCAATTGAATGGCACATTGCCTCTATCCCTGTCGAGCTGCCCGATGCTTAGAGTGGTCAGCCTGAGGAACAATTCGCTGTCCGGTGAGATTACCATTGACTGCAGATTGCTCACGAGGCTGAACAACTTTGATGCTGGGACCAACAAGCTGCGTGGTGCTATACCGCCTCGCCTTGCCTCGTGCACTGAGTTGAGGACGCTGAACCTTGCAAGGAACAAGCTTCAGGGGGAGCTACCGGAGAGCTTCAAGAATTTGACATCACTGTCATACCTTTCTCTTACGGGGAATGGTTTTACCAACTTGTCATCAGCATTGCAAGTCTTGCAGCACCTGCCCAACTTAACTAGCTTGGTGCTCACCAATAACTTCCGTGGTGGTGAAACCATGCCAATGGACGGCATCGAAGGGTTCAAGAGAATGCAGGTTCTTGTCCTGGCGAACTGTGCACTCTTGGGCACGGTTCCACCTTGGCTGCAGAGCTTGAAGAGCCTCAGTGTGCTGGATATTTCATGGAACAATTTGCATGGGGAGATCCTGCCATGGTTAGGCAACCTCGACAGTCTTTTCTACATCGATCTGTCCAACAACTCATTCAGTGGGGAGCTTCCTGCAACCTTTACACAGATGAAGAGTTTAATTTCAAGTAATGGCTCAAGTGGGCAGGCGTCAACAGGAGACCTCCCATTATTCGTCAAGAAGAATTCGACTTCCACTGGTAAAGGCTTGCAGTACAACCAACTCAGTAGCTTCCCGTCATCACTGATCCTCTCAAATAACAAGCTTGTTGGGCCAATATTGCCAGCCTTTGGCCGTCTAGTGAAGCTTCATAATTCTCCTGATACGGAAGCACCACATCGTAAGAAGAACAAAGCAACCCTTGTGGCCCTTGGACTTGGTACTGCAGTGGGGGTTATTTTTGTCTTGTGTATTGCTTCTGTGGTTATATCAAGGATTATTCATTCAAGAATGCAGGAGCATAATCCAAAGGCAGTAGCGAATGCTGATGACTGCTCAGAGTCTCCGAACTCAAGCTTGGTGCTGCTTTTCCAGAACAACAAGGATCTTGGTATTGAAGATATATTGAAGTCAACCAACAACTTTGATCAAGCCTATATAGTTGGTTGTGGTGGTTTTGGACTTGTTTACAAGTCAACACTACCAGATGGGAGGAGAGTTGCAATCAAGCGGCTTTCAGGCGATTACTCTCAGATTGAGCGGGAGTTTCAAGCTGAAGTGGAAACACTATCACGTGCCCAGCATGACAACCTTGTTCTGCTAGAAGGCTATTGCAAGATAGGCAATGACAGACTACTGATCTATGCATACATGGAGAATGGCAGCTTGGATTACTGGCTTCATGAGAGGGCTGATGGTGGTGCCCTGCTGGATTGGCAGAAGAGGCTACGGATTGCACAGGGATCGGCAAGGGGGCTGGCATACTTGCACCTGTCGTGTGAGCCCCATATATTGCACCGAGATATCAAGTCAAGCAATATCCTCTTGGATGAGAACTTTGAAGCTCATTTGGCTGATTTCGGGTTGGCAAGGCTCATATGCGCATACGAGACGCATGTCACAACAGATGTAGTGGGAACCTTGGGCTACATTCCACCTGAATATGGGCAGTCACCTGTGGCTACTTACAAGGGTGATGTGTACAGCTTTGGAATTGTTCTTCTGGAGCTACTCACTGGGCGGCGGCCTGTGGACATGTGCAGGCCAAAAGGGAGCAGAGATGTAGTGTCCTGGGTGCTTCAGATGAAGAAGGAAGACAGGGAAACTGAAGTATTTGATCCAACCATATATGACAAGGAGAATGAAAGCCAGTTGATCAGAATCCTGGAGATAGCACTGCTTTGTGTGACTGCTGCTCCTAAGTCAAGACCAACATCGCAGCAGCTAGTCGAATGGCTTGACCATATCGCTGAAGGTTAA More
Protein seq		MRGYYCFFHFLVVSVLLHVHGGRSESQTCDPTDLAALLAFSDGLDTKAAGMVGWGPGDAACCSWTGVSCDLGRVVALDLSNRSLSRNSLRGGEAVARLGRLPSLRRLDLSANGLAGAFPAGGFPAIEVVNVSSNGFTGPHPAFPGAPNLTVLDITGNAFSGGINVTALCASPVKVLRFSANAFSGDVPAGFGQCKLLNDLFLDGNGLTGSLPKDLYMMPALRKLSLQENKLSGSLDDDLGNLTEITQIDLSYNMFNGNIPDVFGKLRSLESLNLASNQLNGTLPLSLSSCPMLRVVSLRNNSLSGEITIDCRLLTRLNNFDAGTNKLRGAIPPRLASCTELRTLNLARNKLQGELPESFKNLTSLSYLSLTGNGFTNLSSALQVLQHLPNLTSLVLTNNFRGGETMPMDGIEGFKRMQVLVLANCALLGTVPPWLQSLKSLSVLDISWNNLHGEILPWLGNLDSLFYIDLSNNSFSGELPATFTQMKSLISSNGSSGQASTGDLPLFVKKNSTSTGKGLQYNQLSSFPSSLILSNNKLVGPILPAFGRLVKLHNSPDTEAPHRKKNKATLVALGLGTAVGVIFVLCIASVVISRIIHSRMQEHNPKAVANADDCSESPNSSLVLLFQNNKDLGIEDILKSTNNFDQAYIVGCGGFGLVYKSTLPDGRRVAIKRLSGDYSQIEREFQAEVETLSRAQHDNLVLLEGYCKIGNDRLLIYAYMENGSLDYWLHERADGGALLDWQKRLRIAQGSARGLAYLHLSCEPHILHRDIKSSNILLDENFEAHLADFGLARLICAYETHVTTDVVGTLGYIPPEYGQSPVATYKGDVYSFGIVLLELLTGRRPVDMCRPKGSRDVVSWVLQMKKEDRETEVFDPTIYDKENESQLIRILEIALLCVTAAPKSRPTSQQLVEWLDHIAEG
Function		Phytosulfokine receptor 1 [UniProtKB/Swiss-Prot:Q9ZVR7]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_04G030120	OsN22_04G030120_01	Chr04	33635912	33639819	-	NAM
CDS seq	ATGAGAGGTTACTACTGCTTCTTCCATTTCTTGGTGGTGTCCGTTCTGCTCCACGTCCATGGCGGCCGCTCCGAGAGCCAGACGTGCGACCCCACCGACCTGGCGGCGCTCCTGGCCTTCTCCGATGGCCTGGACACGAAGGCCGCCGGGATGGTCGGGTGGGGCCCCGGCGACGCCGCCTGCTGCTCGTGGACGGGCGTGTCCTGTGATCTCGGGAGGGTGGTGGCGCTGGATCTCTCCAACCGGAGCCTCTCCCGGAACTCGCTTCGCGGCGGCGAGGCGGTGGCGCGGCTCGGCCGGCTGCCGAGCCTGCGGCGCCTCGACCTCAGCGCGAACGGCCTCGCCGGCGCGTTCCCGGCGGGCGGCTTCCCGGCGATCGAGGTGGTGAACGTCTCCTCCAACGGGTTCACCGGGCCGCACCCCGCGTTCCCCGGCGCGCCGAACCTGACGGTTCTTGATATCACCGGCAACGCCTTCTCCGGCGGCATCAACGTCACCGCGCTCTGCGCTTCGCCGGTCAAGGTCCTGCGGTTCTCGGCGAATGCCTTCTCTGGTGATGTGCCGGCCGGCTTTGGTCAGTGCAAGCTGCTCAACGACCTCTTCCTTGATGGCAATGGCCTTACTGGGAGCCTCCCCAAAGATCTGTACATGATGCCAGCGCTGAGAAAACTAAGTTTGCAGGAGAATAAGCTCTCCGGCAGCCTCGACGACGACCTCGGTAACCTCACTGAGATTACGCAGATTGACTTGTCATATAACATGTTCAATGGCAATATCCCTGATGTGTTTGGGAAATTGAGGAGCTTGGAGTCCTTAAACTTGGCTTCCAACCAATTGAATGGCACATTGCCTCTATCCCTGTCGAGCTGCCCGATGCTTAGAGTGGTCAGCCTGAGGAACAATTCGCTGTCCGGTGAGATTACCATTGACTGCAGATTGCTCACGAGGCTGAACAACTTTGATGCTGGGACCAACAAGCTGCGTGGTGCTATACCGCCTCGCCTTGCCTCGTGCACTGAGTTGAGGACGCTGAACCTTGCAAGGAACAAGCTTCAGGGGGAGCTACCGGAGAGCTTCAAGAATTTGACATCACTGTCATACCTTTCTCTTACGGGGAATGGTTTTACCAACTTGTCATCAGCATTGCAAGTCTTGCAGCACCTGCCCAACTTAACTAGCTTGGTGCTCACCAATAACTTCCGTGGTGGTGAAACCATGCCAATGGACGGCATCGAAGGGTTCAAGAGAATGCAGGTTCTTGTCCTGGCGAACTGTGCACTCTTGGGCACGGTTCCACCTTGGCTGCAGAGCTTGAAGAGCCTCAGTGTGCTGGATATTTCATGGAACAATTTGCATGGGGAGATCCTGCCATGGTTAGGCAACCTCGACAGTCTTTTCTACATCGATCTGTCCAACAACTCATTCAGTGGGGAGCTTCCTGCAACCTTTACACAGATGAAGAGTTTAATTTCAAGTAATGGCTCAAGTGGGCAGGCGTCAACAGGAGACCTCCCATTATTCGTCAAGAAGAATTCGACTTCCACTGGTAAAGGCTTGCAGTACAACCAACTCAGTAGCTTCCCGTCATCACTGATCCTCTCAAATAACAAGCTTGTTGGGCCAATATTGCCAGCCTTTGGCCGTCTAGTGAAGCTTCATAATTCTCCTGATACGGAAGCACCACATCGTAAGAAGAACAAAGCAACCCTTGTGGCCCTTGGACTTGGTACTGCAGTGGGGGTTATTTTTGTCTTGTGTATTGCTTCTGTGGTTATATCAAGGATTATTCATTCAAGAATGCAGGAGCATAATCCAAAGGCAGTAGCGAATGCTGATGACTGCTCAGAGTCTCCGAACTCAAGCTTGGTGCTGCTTTTCCAGAACAACAAGGATCTTGGTATTGAAGATATATTGAAGTCAACCAACAACTTTGATCAAGCCTATATAGTTGGTTGTGGTGGTTTTGGACTTGTTTACAAGTCAACACTACCAGATGGGAGGAGAGTTGCAATCAAGCGGCTTTCAGGCGATTACTCTCAGATTGAGCGGGAGTTTCAAGCTGAAGTGGAAACACTATCACGTGCCCAGCATGACAACCTTGTTCTGCTAGAAGGCTATTGCAAGATAGGCAATGACAGACTACTGATCTATGCATACATGGAGAATGGCAGCTTGGATTACTGGCTTCATGAGAGGGCTGATGGTGGTGCCCTGCTGGATTGGCAGAAGAGGCTACGGATTGCACAGGGATCGGCAAGGGGGCTGGCATACTTGCACCTGTCGTGTGAGCCCCATATATTGCACCGAGATATCAAGTCAAGCAATATCCTCTTGGATGAGAACTTTGAAGCTCATTTGGCTGATTTCGGGTTGGCAAGGCTCATATGCGCATACGAGACGCATGTCACAACAGATGTAGTGGGAACCTTGGGCTACATTCCACCTGAATATGGGCAGTCACCTGTGGCTACTTACAAGGGTGATGTGTACAGCTTTGGAATTGTTCTTCTGGAGCTACTCACTGGGCGGCGGCCTGTGGACATGTGCAGGCCAAAAGGGAGCAGAGATGTAGTGTCCTGGGTGCTTCAGATGAAGAAGGAAGACAGGGAAACTGAAGTATTTGATCCAACCATATATGACAAGGAGAATGAAAGCCAGTTGATCAGAATCCTGGAGATAGCACTGCTTTGTGTGACTGCTGCTCCTAAGTCAAGACCAACATCGCAGCAGCTAGTCGAATGGCTTGACCATATCGCTGAAGGTTAA More
Protein seq	MRGYYCFFHFLVVSVLLHVHGGRSESQTCDPTDLAALLAFSDGLDTKAAGMVGWGPGDAACCSWTGVSCDLGRVVALDLSNRSLSRNSLRGGEAVARLGRLPSLRRLDLSANGLAGAFPAGGFPAIEVVNVSSNGFTGPHPAFPGAPNLTVLDITGNAFSGGINVTALCASPVKVLRFSANAFSGDVPAGFGQCKLLNDLFLDGNGLTGSLPKDLYMMPALRKLSLQENKLSGSLDDDLGNLTEITQIDLSYNMFNGNIPDVFGKLRSLESLNLASNQLNGTLPLSLSSCPMLRVVSLRNNSLSGEITIDCRLLTRLNNFDAGTNKLRGAIPPRLASCTELRTLNLARNKLQGELPESFKNLTSLSYLSLTGNGFTNLSSALQVLQHLPNLTSLVLTNNFRGGETMPMDGIEGFKRMQVLVLANCALLGTVPPWLQSLKSLSVLDISWNNLHGEILPWLGNLDSLFYIDLSNNSFSGELPATFTQMKSLISSNGSSGQASTGDLPLFVKKNSTSTGKGLQYNQLSSFPSSLILSNNKLVGPILPAFGRLVKLHNSPDTEAPHRKKNKATLVALGLGTAVGVIFVLCIASVVISRIIHSRMQEHNPKAVANADDCSESPNSSLVLLFQNNKDLGIEDILKSTNNFDQAYIVGCGGFGLVYKSTLPDGRRVAIKRLSGDYSQIEREFQAEVETLSRAQHDNLVLLEGYCKIGNDRLLIYAYMENGSLDYWLHERADGGALLDWQKRLRIAQGSARGLAYLHLSCEPHILHRDIKSSNILLDENFEAHLADFGLARLICAYETHVTTDVVGTLGYIPPEYGQSPVATYKGDVYSFGIVLLELLTGRRPVDMCRPKGSRDVVSWVLQMKKEDRETEVFDPTIYDKENESQLIRILEIALLCVTAAPKSRPTSQQLVEWLDHIAEG More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_04G030120	OsN22_04G030120_02	Chr04	33635918	33639671	-	IsoSeq
CDS seq	ATGTTTCGTACAACAATTTGTCTGGAGATATCCCGGCAGGAGGCCAATTCTCCACGTTCACTAGTGAGGATTTTGCAGGCAATCACGCACTACACTTTCCTCGGAATTCCTCCAGCACAAAGAATTCTCCTGATACGGAAGCACCACATCGTAAGAAGAACAAAGCAACCCTTGTGGCCCTTGGACTTGGTACTGCAGTGGGGGTTATTTTTGTCTTGTGTATTGCTTCTGTGGTTATATCAAGGATTATTCATTCAAGAATGCAGGAGCATAATCCAAAGG More
Protein seq	MFRTTICLEISRQEANSPRSLVRILQAITHYTFLGIPPAQRILLIRKHHIVRRTKQPLWPLDLVLQWGLFLSCVLLLWLYQGLFIQECRSIIQR

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.041765	3.573794	1.510818

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0672100	RBH	0.556730	0.581728	2.511039
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g57630	RBH	0.362717	0.376947	0.633674
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0672100	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0030600	RBH	0.0	8.413468	2.988112
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0031380	RBH	0.278892	7.036297	1.009024
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0030940	RBH	0.053663	5.958163	2.320041
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0030770	RBH	0.029428	0.260410	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0031020	RBH	6.225421	52.000969	13.744159
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0540800	RBH	3.645007	22.7398375	12.088713
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0029670	RBH	0.099936	0.584474	0.525234
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0546600	RBH	3.805562	16.377016	15.343238
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0030110	RBH	0.229466	0.470202	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0029950	RBH	0.508583	19.906691	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0030070	RBH	0.000000	19.500547	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0030620	RBH	0.280183	1.421869	1.161767
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0030630	RBH	0.188749	5.878284	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G004060	SBH	0.292437	2.052631	0.572981
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0029820	RBH	0.698894	14.258538	4.033401

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.