Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_04G009310 | OGI:04059010 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr04:16760906-16761739 | ||||||||
| Gene Symbol | WAK60, OsWAK60 | ||||||||||
| DNA seq | TCAAGATGTTATCCCAAGAGTGAAATACTCGGTTGTTCTGCTTCTGGTGTAACTTGTGCTATCTATTGTCCGCGTAAAGCTTCTATCCACCTCACGCAAGGCAATCAGCTCGCCTGCCGCATCCAGACGTTGTCGCACCAATCCTGTCAACCGTCGGAGCTCTTGGGCGACTTGCGACATCGTCGGCCGCTTATCACCTGGCATAGCTAAACACCTGCTTGTGAGCTCCGCAACTTGGTGGATGACCTCCAAGTCGTCTTCTTTGATGATCTCCTTATCTATGAGCTCGTCAACCGTGCCCTCCTTCATAGCGTCTTGAAACACCGACACAAGGCACCGCGGCTTCTTACCTGTTAAAAGCTCCACAAGAACAACACCAAAACTATAAACATCACTCTTGTCAGTGAGCTTACATGATTGCAGGTACTCAGGATCTAGGTACCCGACTGTGCCTTTTGCCACGAGGGCTTCTTCGTCCATTCGTGCGATTATTGAGCAACCAAAATCGGCGACCTTGGCAATCAAATTGTCACCTAGCAGAATGTTGGCAGATTTCACATCCCCATGGAGGATAGGACGTGCCAACGAATGCAAGTGTCCAAGTGCTTGAGAAGATTCAGCAGCTATCCTCAAACGAGTTGCAAGTGATATGTAACATCTCCCGTCTTGACCATGTAACAAGTCATGTAACGTCTTGTTCGGAACAAATTCATAAACCAGAATAGGGACTTCAAACAATAGGCAGCAACCAAGAAGCTTAACTACATGATCGTGGTTGACGCGACATAGTATAAGTAGCTCCTGTCCAAATTCCATTCTCCTGCTTTCATCCAT
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| CDS seq | ATGGATGAAAGCAGGAGAATGGAATTTGGACAGGAGCTACTTATACTATGTCGCGTCAACCACGATCATGTAGTTAAGCTTCTTGGTTGCTGCCTATTGTTTGAAGTCCCTATTCTGGTTTATGAATTTGTTCCGAACAAGACGTTACATGACTTGTTACATGGTCAAGACGGGAGATGTTACATATCACTTGCAACTCGTTTGAGGATAGCTGCTGAATCTTCTCAAGCACTTGGACACTTGCATTCGTTGGCACGTCCTATCCTCCATGGGGATGTGAAATCTGCCAACATTCTGCTAGGTGACAATTTGATTGCCAAGGTCGCCGATTTTGGTTGCTCAATAATCGCACGAATGGACGAAGAAGCCCTCGTGGCAAAAGGCACAGTCGGGTACCTAGATCCTGAGTACCTGCAATCATGTAAGCTCACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTTCTTGTGGAGCTTTTAACAGGTAAGAAGCCGCGGTGCCTTGTGTCGGTGTTTCAAGACGCTATGAAGGAGGGCACGGTTGACGAGCTCATAGATAAGGAGATCATCAAAGAAGACGACTTGGAGGTCATCCACCAAGTTGCGGAGCTCACAAGCAGGTGTTTAGCTATGCCAGGTGATAAGCGGCCGACGATGTCGCAAGTCGCCCAAGAGCTCCGACGGTTGACAGGATTGGTGCGACAACGTCTGGATGCGGCAGGCGAGCTGATTGCCTTGCGTGAGGTGGATAGAAGCTTTACGCGGACAATAGATAGCACAAGTTACACCAGAAGCAGAACAACCGAGTATTTCACTCTTGGGATAACATCTTGA
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| Protein seq | MDESRRMEFGQELLILCRVNHDHVVKLLGCCLLFEVPILVYEFVPNKTLHDLLHGQDGRCYISLATRLRIAAESSQALGHLHSLARPILHGDVKSANILLGDNLIAKVADFGCSIIARMDEEALVAKGTVGYLDPEYLQSCKLTDKSDVYSFGVVLVELLTGKKPRCLVSVFQDAMKEGTVDELIDKEIIKEDDLEVIHQVAELTSRCLAMPGDKRPTMSQVAQELRRLTGLVRQRLDAAGELIALREVDRSFTRTIDSTSYTRSRTTEYFTLGITS |
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| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_04G009310 | OsN22_04G009310_01 | Chr04 | 16760906 | 16761739 | - | NAM | ||
| CDS seq | ATGGATGAAAGCAGGAGAATGGAATTTGGACAGGAGCTACTTATACTATGTCGCGTCAACCACGATCATGTAGTTAAGCTTCTTGGTTGCTGCCTATTGTTTGAAGTCCCTATTCTGGTTTATGAATTTGTTCCGAACAAGACGTTACATGACTTGTTACATGGTCAAGACGGGAGATGTTACATATCACTTGCAACTCGTTTGAGGATAGCTGCTGAATCTTCTCAAGCACTTGGACACTTGCATTCGTTGGCACGTCCTATCCTCCATGGGGATGTGAAATCTGCCAACATTCTGCTAGGTGACAATTTGATTGCCAAGGTCGCCGATTTTGGTTGCTCAATAATCGCACGAATGGACGAAGAAGCCCTCGTGGCAAAAGGCACAGTCGGGTACCTAGATCCTGAGTACCTGCAATCATGTAAGCTCACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTTCTTGTGGAGCTTTTAACAGGTAAGAAGCCGCGGTGCCTTGTGTCGGTGTTTCAAGACGCTATGAAGGAGGGCACGGTTGACGAGCTCATAGATAAGGAGATCATCAAAGAAGACGACTTGGAGGTCATCCACCAAGTTGCGGAGCTCACAAGCAGGTGTTTAGCTATGCCAGGTGATAAGCGGCCGACGATGTCGCAAGTCGCCCAAGAGCTCCGACGGTTGACAGGATTGGTGCGACAACGTCTGGATGCGGCAGGCGAGCTGATTGCCTTGCGTGAGGTGGATAGAAGCTTTACGCGGACAATAGATAGCACAAGTTACACCAGAAGCAGAACAACCGAGTATTTCACTCTTGGGATAACATCTTGA
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| Protein seq | MDESRRMEFGQELLILCRVNHDHVVKLLGCCLLFEVPILVYEFVPNKTLHDLLHGQDGRCYISLATRLRIAAESSQALGHLHSLARPILHGDVKSANILLGDNLIAKVADFGCSIIARMDEEALVAKGTVGYLDPEYLQSCKLTDKSDVYSFGVVLVELLTGKKPRCLVSVFQDAMKEGTVDELIDKEIIKEDDLEVIHQVAELTSRCLAMPGDKRPTMSQVAQELRRLTGLVRQRLDAAGELIALREVDRSFTRTIDSTSYTRSRTTEYFTLGITS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.273893 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0275100 | SBH | 0.0 | 0.0 | 0.225091 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g29770 | RBH | 0.0 | 0.0 | 0.263250 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0275100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0010090 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010610 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010430 | RBH | 0.0 | 0.768515 | 2.653475 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010020 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010540 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0296000 | RBH | 0 | 0 | 0.293012 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0006250 | SBH | 0.0 | 0.060504 | 0.046490 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0281200 | SBH | 0.345818 | 0.308578 | 0.044118 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | SBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0006300 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0006270 | SBH | 0.0 | 2.350280 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010660 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010160 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009610 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009580 | SBH | 0.0 | 5.172986 | 0.0 |
