Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_04g0010020 | OGI:04059010 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr04:16411438-16413902 | ||||||||
| Gene Symbol | WAK60, OsWAK60 | ||||||||||
| DNA seq | TCAAGATGTTATCCCAAGAGTGAAATACTCGGTTGTTCTGCTTCTGGTGTAACTTGTGCTATCTATTGTCCGCGTAAAGCTTCTATCCACCTCACGCAAGGCAATCAGCTCGCCTGCCGCATCCAGACGTTGTCGCACCAATCCTGTCAACCGTCGGAGCTCTTGGGCGACTTGCGACATCGTCGGCCGCTTATCACCTGGCATAGCTAAACACCTGCTTGTGAGCTCCGCAACTTGGTGGATGACCTCCAAGTCGTCTTCTTTGATGATCTCCTTATCTATGAGCTCGTCAACCGTGCCCTCCTTCATAGCGTCTTGAAACACCGACACAAGGCACCGCGGCTTCTTACCTGTTAAAAGCTCCACAAGAACAACACCAAAACTATAAACATCACTCTTGTCAGTGAGCTTACATGATTGCAGGTACTCAGGATCTAGGTACCCGACTGTGCCTTTTGCCACGAGGGCTTCTTCGTCCATTCGTGCGATTATTGAGCAACCAAAATCGGCGACCTTGGCAATCAAATTGTCACCTAGCAGAATGTTGGCAGATTTCACATCCCCATGGAGGATAGGACGTGCCAACGAATGCAAGTGTCCAAGTGCTTGAGAAGATTCAGCAGCTATCCTCAAACGAGTTGCAAGTGATATGTAACATCTCCCGTCTTGACCATGTAACAAGTCATGTAACGTCTTGTTCGGAACAAATTCATAAACCAGAATAGGGACTTCAAACAATAGGCAGCAACCAAGAAGCTTAACTACATGATCGTGGTTGACGCGACATAGTATAAGTAGCTCCTGTCCAAATTCCATTCTCCTGCTTTCATCCATCCCTTTGCATCTTTTTATTGCAACAGGAATGCTTTCTATAAATCCCTTGTAAACTGTCCCTTGTCCTCCTTCTCCAATGATTTGATTCTTGTCAAAGTCATTTGTTGCTACCTCAATGTCTTCCTGTCTGTACAACGTAAATTCAAGGTTGCAGTCGATTTTCATCATATCAGACAGAAGCTGGCCTCCATGTTGTTGAAAATACTCGTCCCTCTGTCTTATAAGACGCTGTCTTTTGATACTTCGCCTGTGAATGATCACTTGCATTCCAAGAAGAGCAATAAGAACAGTAAAAATAAAAGAACAAATGCCTGCAGGAATGAAAACATCAGTCCATTACTTGGGATCTAAAAGCAAAAGTTTAGGAGTTAACAACACCACGAAGGGCTGTGAGATCAAATAAGACAGAGCAACATGTAGAGAAGAGCACATGCCTCATGTTTCGATTGTATCTAGTTTGTTTGGATCTTCCATTGGTTTTTTTATTACATGGCAAACGTACAATCATACACAACACTACACATGCAACATTACACTCACACCGTTCCGAATGCGCATCCTAATAAACATTCTAATAGAAATAAACCAGCGCCACATCCATGATCTTACTAAAACTCTGTTAAAAGCCCACCTACATGTACGTAATATTTATGGGCACCAGGATTTGAACTTTGGTGGGTGAAGTCAAACACCCACGACTCGAAACCACACCACTGGTTCTTCCGCATCTTCATTCGTTTTTTGATCCAGTGGTCAATAGTATCTATTATGTTAGACGCCGTTGAAGGGAAATAAATGATTTTAACGTACCATTTAATAAGTTAAGGGGAGTAATTAATTGAATGATATTGCATACAATGTTAGCCAAATTTGAAATTTATAAGAGTAAATTTTGGAAAACTGTAAGTATTTACTTAAAATTATCGCCTTCATACAACTTTAACTAGGTATTTCACAAAATATCAAACGATTTTATCAGAAAACTTCTCTATACCCTGTGTGTGGATAATATGTGCCTTATTTCCGATAGCATAAGTATGGTATGACAGGTGGGCTGAAACTTATCGAGCGTACTTCCTCTGTCCTAAAATAACTTCATTTTTTACGCACCCTACATATTCCAATACAAAACCAAAAGAGTAGAATACCCCCACTTATCAAATCGCAATTAAATTATTCCTCTCCCACTACTACAAAACCCCTAATAGGTGCTGGTTTAATGAACCAATACCTATTGACAATTTTCCAGTTCCATAGGACGAAAAAATATAGAATCAACATCTTTGACCAAATATAGGTACTAGTTCTAGATAAAAACCAACACCAATAATATTAGCGCCGGATTCTCTAAAATGAACCAACACCTACAATATAAGTATAGGTGCTGGTCCAACACCTATAAAAAGCTGACCTGAGCTGACCCAATAGGTCATGGGGTTGGGAATACTTTAAACCCCACCAAGTCAACCCACCCCTTCTTCTCCTCTCTCGCCCCCATCCTTGATCTCCTCCTCGCCTTCCTCGACACCCCCCCAATCCTCATAGCCTTTGCCACCACCGACACTTATCGTCCTCTCCCCATTCTCGTCCTCACCAAATGTACGCCTCCTCGGTACTCCGGCAGCTTCCAT
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| CDS seq | ATGGAAGCTGCCGGAGTACCGAGGAGGCGTACATTTGGTGAGGACGAGAATGGGGAGAGGACGATAAGTGTCGGTGGTGGCAAAGGCTATGAGGATTGGGGGGGTGTCGAGGAAGGCGAGGAGGAGATCAAGGATGGGGGCGAGAGAGGAGAAGAAGGGCCCTTCGTGGTGTTGTTAACTCCTAAACTTTTGCTTTTAGATCCCAAGCGAAGTATCAAAAGACAGCGTCTTATAAGACAGAGGGACGAGTATTTTCAACAACATGGAGGCCAGCTTCTGTCTGATATGATGAAAATCGACTGCAACCTTGAATTTACGTTGTACAGACAGGAAGACATTGAGGTAGCAACAAATGACTTTGACAAGAATCAAATCATTGGAGAAGGAGGACAAGGGACAGTTTACAAGGGATTTATAGAAAGCATTCCTGTTGCAATAAAAAGATGCAAAGGGATGGATGAAAGCAGGAGAATGGAATTTGGACAGGAGCTACTTATACTATGTCGCGTCAACCACGATCATGTAGTTAAGCTTCTTGGTTGCTGCCTATTGTTTGAAGTCCCTATTCTGGTTTATGAATTTGTTCCGAACAAGACGTTACATGACTTGTTACATGGTCAAGACGGGAGATGTTACATATCACTTGCAACTCGTTTGAGGATAGCTGCTGAATCTTCTCAAGCACTTGGACACTTGCATTCGTTGGCACGTCCTATCCTCCATGGGGATGTGAAATCTGCCAACATTCTGCTAGGTGACAATTTGATTGCCAAGGTCGCCGATTTTGGTTGCTCAATAATCGCACGAATGGACGAAGAAGCCCTCGTGGCAAAAGGCACAGTCGGGTACCTAGATCCTGAGTACCTGCAATCATGTAAGCTCACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTTCTTGTGGAGCTTTTAACAGGTAAGAAGCCGCGGTGCCTTGTGTCGGTGTTTCAAGACGCTATGAAGGAGGGCACGGTTGACGAGCTCATAGATAAGGAGATCATCAAAGAAGACGACTTGGAGGTCATCCACCAAGTTGCGGAGCTCACAAGCAGGTGTTTAGCTATGCCAGGTGATAAGCGGCCGACGATGTCGCAAGTCGCCCAAGAGCTCCGACGGTTGACAGGATTGGTGCGACAACGTCTGGATGCGGCAGGCGAGCTGATTGCCTTGCGTGAGGTGGATAGAAGCTTTACGCGGACAATAGATAGCACAAGTTACACCAGAAGCAGAACAACCGAGTATTTCACTCTTGGGATAACATCTTGA
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| Protein seq | MEAAGVPRRRTFGEDENGERTISVGGGKGYEDWGGVEEGEEEIKDGGERGEEGPFVVLLTPKLLLLDPKRSIKRQRLIRQRDEYFQQHGGQLLSDMMKIDCNLEFTLYRQEDIEVATNDFDKNQIIGEGGQGTVYKGFIESIPVAIKRCKGMDESRRMEFGQELLILCRVNHDHVVKLLGCCLLFEVPILVYEFVPNKTLHDLLHGQDGRCYISLATRLRIAAESSQALGHLHSLARPILHGDVKSANILLGDNLIAKVADFGCSIIARMDEEALVAKGTVGYLDPEYLQSCKLTDKSDVYSFGVVLVELLTGKKPRCLVSVFQDAMKEGTVDELIDKEIIKEDDLEVIHQVAELTSRCLAMPGDKRPTMSQVAQELRRLTGLVRQRLDAAGELIALREVDRSFTRTIDSTSYTRSRTTEYFTLGITS |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_04g0010020 | OsARC_04g0010020.01 | Chr04 | 16411438 | 16413902 | - | NAM | ||
| CDS seq | ATGGAAGCTGCCGGAGTACCGAGGAGGCGTACATTTGGTGAGGACGAGAATGGGGAGAGGACGATAAGTGTCGGTGGTGGCAAAGGCTATGAGGATTGGGGGGGTGTCGAGGAAGGCGAGGAGGAGATCAAGGATGGGGGCGAGAGAGGAGAAGAAGGGCCCTTCGTGGTGTTGTTAACTCCTAAACTTTTGCTTTTAGATCCCAAGCGAAGTATCAAAAGACAGCGTCTTATAAGACAGAGGGACGAGTATTTTCAACAACATGGAGGCCAGCTTCTGTCTGATATGATGAAAATCGACTGCAACCTTGAATTTACGTTGTACAGACAGGAAGACATTGAGGTAGCAACAAATGACTTTGACAAGAATCAAATCATTGGAGAAGGAGGACAAGGGACAGTTTACAAGGGATTTATAGAAAGCATTCCTGTTGCAATAAAAAGATGCAAAGGGATGGATGAAAGCAGGAGAATGGAATTTGGACAGGAGCTACTTATACTATGTCGCGTCAACCACGATCATGTAGTTAAGCTTCTTGGTTGCTGCCTATTGTTTGAAGTCCCTATTCTGGTTTATGAATTTGTTCCGAACAAGACGTTACATGACTTGTTACATGGTCAAGACGGGAGATGTTACATATCACTTGCAACTCGTTTGAGGATAGCTGCTGAATCTTCTCAAGCACTTGGACACTTGCATTCGTTGGCACGTCCTATCCTCCATGGGGATGTGAAATCTGCCAACATTCTGCTAGGTGACAATTTGATTGCCAAGGTCGCCGATTTTGGTTGCTCAATAATCGCACGAATGGACGAAGAAGCCCTCGTGGCAAAAGGCACAGTCGGGTACCTAGATCCTGAGTACCTGCAATCATGTAAGCTCACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTTCTTGTGGAGCTTTTAACAGGTAAGAAGCCGCGGTGCCTTGTGTCGGTGTTTCAAGACGCTATGAAGGAGGGCACGGTTGACGAGCTCATAGATAAGGAGATCATCAAAGAAGACGACTTGGAGGTCATCCACCAAGTTGCGGAGCTCACAAGCAGGTGTTTAGCTATGCCAGGTGATAAGCGGCCGACGATGTCGCAAGTCGCCCAAGAGCTCCGACGGTTGACAGGATTGGTGCGACAACGTCTGGATGCGGCAGGCGAGCTGATTGCCTTGCGTGAGGTGGATAGAAGCTTTACGCGGACAATAGATAGCACAAGTTACACCAGAAGCAGAACAACCGAGTATTTCACTCTTGGGATAACATCTTGA
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| Protein seq | MEAAGVPRRRTFGEDENGERTISVGGGKGYEDWGGVEEGEEEIKDGGERGEEGPFVVLLTPKLLLLDPKRSIKRQRLIRQRDEYFQQHGGQLLSDMMKIDCNLEFTLYRQEDIEVATNDFDKNQIIGEGGQGTVYKGFIESIPVAIKRCKGMDESRRMEFGQELLILCRVNHDHVVKLLGCCLLFEVPILVYEFVPNKTLHDLLHGQDGRCYISLATRLRIAAESSQALGHLHSLARPILHGDVKSANILLGDNLIAKVADFGCSIIARMDEEALVAKGTVGYLDPEYLQSCKLTDKSDVYSFGVVLVELLTGKKPRCLVSVFQDAMKEGTVDELIDKEIIKEDDLEVIHQVAELTSRCLAMPGDKRPTMSQVAQELRRLTGLVRQRLDAAGELIALREVDRSFTRTIDSTSYTRSRTTEYFTLGITS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0370900 | SBH | 0.191076 | 0.000000 | 1.171410 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g29770 | RBH | 0.0 | 0.0 | 0.263250 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0370900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009880 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010610 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010430 | SBH | 0.0 | 0.768515 | 2.653475 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010280 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0296000 | RBH | 0 | 0 | 0.293012 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0009910 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0281200 | SBH | 0.345818 | 0.308578 | 0.044118 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | SBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010100 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010330 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0006190 | SBH | 0.0 | 0.120069 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010160 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009310 | RBH | 0.273893 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009580 | SBH | 0.0 | 5.172986 | 0.0 |
