Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_03G011430 OGI:03023140 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr03:8785543-8790095
Gene Symbol -
DNA seq

TTTGTGAATTATTTTCTGTCCCTCTTCTTTTGTGAATTACACGCAAGTCAAACAACGCGTAAAAACTGAGAAGTGATCGTCAAGACGCCAAATGCCAATCGCGACGTGGCTGTAAACGCCAAACTGCCAACTGGAGAACAACAACCAACCAATCGTAGCTTTTCCTTTGGAATACCCGTACCACTGCACAGGAATCGTTGATGAGCTGCCGTACACCCTTTGTTCTAACAAGAAGACATCCACGGCAATTCCAACCTAAGCTACTGTCATCGGAAGTTCCAAAGTTTGGCAAAGCACGGCATATGATGGCAAAGACAAATAAATCACCACCACGAACATGCATATTTACATCGTCAGTTCCTACTTACACTCATGCGCTTGAATGCACATTTAACCTATTCTCCGGGCTGAATATTAGCCGCTGACTAAACCACGACATATCCCCTCGCAGCAAACTATGAGAAAGAATCAACAAATGAAACGCAATGGTTGGGGTTGACGACTGTGCTGTTGACAATATTGCTTCCCGGTAACGAATCGTCCTCCCCGGCCAGCTCCACATGATTAGCAGAACTAATATCTGCAAGAGAGAATATGCACGCCAGTCAAAAGTCAGATTAACCACGCGCTCAATGTCAACCTAGTGCGCCACAACCGGGCAGCTGACGGTAACAACTTTGTATTATATTTGATATGGACGAATCTGTGTTCCGGCGATGATGTGTGAAAATCGTTTGCCCAACTTTTCTTTCGAAGCAAAACAATTGTGTAGGAACAGTTTAAATATTTACTATTTTTGCATGAGTGGAAAGCAAGTTAAAGAAGACTAACTTACCATTCCACCGATATTCTGAAGCCGTCCTCAATTCTATCCATTTATGCCGCGTACCGATGAATTTGAGCGCGAAGATGTCCTCATAGACCTTATCGACCGCATTGACCTATTAACGAAAGGATGCTCCAGCAGCTTTGCTGCAGAGGGTCTGTCTTGCGGATTGGGTTTTACGCACTGGCTTATAAAATCACGAGCATCCCTAGAAAGGCAATTTGGAATTGCTGGTGGTTCCCCCTTCCCAATCCTGTATAAAGCTTGTGTCTGCAGAACAAGTTGAGAAAATGGGGTAAATGCAAAAAGGAAACAAAGTAATATGCATACTGGATAATTATCAAACTTGGAACCAACACCATAACTGAATTTGGAGGAGCTAAATTAGATTCCTGATGAACAATAACTCACCCATTCCAGACCAGGATAGGGAAGTTGACGTGTCAACATCTCTAGGACTGTGCAGCCCAGACTCCATATATCAGCTTCAGGTCCATATGTTGTCTTGGGATTGACAACCTGAAATTTCATCATTATCTTAGGAGGCAACTACAACATTATCTAACATCAATGCATTATAAACACATTTTTGGCTTTTTACCTCCTACCTATTAGTTTGTTATTCTAGATAAACCATCAAAATAAAAGAAGGTAAACAAATACTACCTCTGTTTCAAGTTATAAGATTTTCTAGTATTGCCTACATTCATATATATGTTAATGAATCTAGATATATATGTGTGCCTAGATTCATTAACATCTATATGAATGTGGGCAATGCTAGAAAATCTTATAATATGAAACGGAGGAAGTAAAACCCAAGCATGTCCAAATCTAATCTAATAGAAATATTGTGCCATACCTCAGGTGCCATCCAATAAACAGTTCCTTTGCACGATTTAAGCACGTTGAATTTGGTAATCTGAGAGATTTGACAGAAATCAATCATATAAATGAGATAAATTTTAAAATAATAACTGAAACATTCAAAGATTAAAAAGGAACATAAAGATTTCGCGAGAGTAAGCAGACCTCCTTAGCAAGACCAAAGTCAGCAAGTTTCACGGATCCATTGGCATGCACCAATATATTGGCACATTTGATATCCCTGCAAGACGAGATTTGAACTGTTATTCACTTATTCAGAATAAATGTACAGTACCAGTTCCTTAAGAATCTTCAAGCTAACGATAAAAATCAGTGAGCAGGCATTAATTAGAATAACTGTCAGCTGAAGTGAAAAAAAAAAACAATAAGCCTCCTTAGAAGGCTAAACAGCAGATATGCTGATTCAGCTAATGTTATTACCTATGAACAATGTTTCGTTCATGCAGGTAAGTCAACCCATTAAGAATCTGTCTTGTATATGCTGAAACATGAGTATCTCGCAGTCTGTACTTCTGATACAAAGATGCAAGAGATCCTTGGGTGACTAATTCAAGGAAGATGTACAGTTTTGAGTCCTCCTGCAGTAGTCACAAGAATGGTTCAATATGAGCCTTAAAAGAAAAAAAGTACAAGAAAACTAGAAATTTACATACAGCCCAATAGCAAATGGTGCTTCAACAAAATGATGAATGGTCGATCAATAACTTACTTTGTCGGTACCATAGTACTGCACAATATTTTCATGTTCAAACTGACTCAAAAGTGCGATTTCCTAAAATATGAAAAGAAGTTAGGACAGATCACATTTACAATACAACAGAACCAGTAAGATATTATAGCCCTGGGCCCTGGCATTATTGACAAACAAAAAGGAAACACCAACCTGCTCAAGCTGAAAAATGCACTGCTGTGCATTGCTCCCTTGATCACACAAGCAGACCTCTTTGACAGCAAAGAAGACACCCTCGCTGTAAAACATCAAATCATAAGATGTCGATATCAACTATTCCGGCATGTAAGAGACATGTGTTATGCAAACATTACAGCAGCCTATACTAAGAATAACTGTTGCAATTGAACACCACATAAAAGGAACAACAGGTATTACAATGATTCATTTAGGACAGCCAGTTCATGTGCATCTTCTAGAAGCTAAGTTTCACATGTTTCAGAACCCTTAGTGATTAAACATATGTTTACATCATGTCATATTGAACACAACAAATCAAATAAATAAAGTACTATTACATTCAACATTCTGACTCTAGCGGAATTCTGATTGTCTACAGCGTAGGGTTATGCTATTCAAGTAGTTGAAAATGAAATCATGTTGATGATTCAATTACCACTTACTAGTACCCTACACGCCATCTAGCAACTGTACTTAAAGAGATATAATTGGAGACATACAGTGTACAATCAATCAGAGAATCAATTTTCCTAAATTCGGGTTAACAATGGCTTCCAAGATATGCCTTATGCTATCTTAGGGCAGGTTAAATTGTTGGGTCTCACAAATTCTCGACCACAAAGTGAACAATCAGCATATAGAAATCATAAGCACAAAGTGAACAATCAACATATAGAAATCATAAGCACAAAGTGAGCGATCAGCATATAGAAATCATAAAATTTACTCTTTAGAGCACTTACTCGCTGATCCCCTCGAAGACTGTCCCAAACGAGCCACTTCCCAGGAGCATCCCCCGGTTCCACGACCGGATCTTCCTCCTAAACCTCCCATTCGGCGAGATGTAGAACATGGACTCGGTGGTTGTGCTCGACGTTTCGTCATCGTTCGTCGTCGACAGCGAAGACGTGCCCGTGAATTCCTCGGACGTCTCCCCTAGCCTGAGCTCCTCCAGCGTCAACACCGCGGCCGCATCATCCTCCTCCTCACCCGCGTCCTGGCATGCGGAATCACCACCAGATCTGCTCGCCGGGGCGTGAGCATGGCTATCCTCCTCCGGCGCGAACGACCGCAAGATATCCCACGTGGACTCCACCACGCAGACCGCCGGCCGTACCATCGACGGCGGCGGCTTGAGCACGACCGGCGGCGGCCGCACGCCCTTGATCCCTCCCTCGCCGCTCGCCTTCCTCACATCTGGACGGGCTGGCTCCCACGGATCCACCCGTAATAGGGGCGCTGGAGCTTCAATTGCCACGGACCTGGGCGTTTCCTTCGCCGGGAGCACGGGAGCAGCGGCGGGGGCGGGCAGGGAGGGCGGCTCCTCCTCGGCGGCAACCTCGCGGCGGACAGGAGAGTCCCTCGCGGGGGGTTCCTCGCGCGGCTTGGGGGTGGAGGCGGAGGAGGAGAAGGAGGAGCGGCCGGCCTTGTGCGCCTCCCAGTCAGCGACGGGGACGGCGAAGTCGTCGACGCCGGAGAGGCCGAGGCTGGAGCAGAGCAGCTGCACGTCCCTGCACCCGTCGCCGCTCCCGCCGATCCGGAAGCTCGTGAGGTCGAGGGAGCACGCCGGGGAGCAGGCGAGCGACGGCGACCCGGACGCAGGCGCGGACGCGGCGGGCGGGGACTGCGGGTAGGCGCAGAAGTTCGAGGCGTCGTATCCGATGTGCTTCGCGGCGTTCCGGCGTTCGAGCCGGCGGCGCCGCCTCGACGAGCCCCCAGACGACGACGACGGCGACGGCGGCGCGGCGGGCGGCCCCATCGTCGGCCTCAGCTCATGGACGAGAGAGAGAGGGGAAGGATGGTTCGTGATAAGTGCCTAGCGAGCGAGACTCCTCTTGGCTTGGCTTTGGGTTTGGGGGAGAAGAGGAGAGAAGAGAAGGGAAGACGGCAAGCTGCAGATTTTTATTTTTTTTCTCCGTTTCGCCCACT

More
CDS seq

ATGGGGCCGCCCGCCGCGCCGCCGTCGCCGTCGTCGTCGTCTGGGGGCTCGTCGAGGCGGCGCCGCCGGCTCGAACGCCGGAACGCCGCGAAGCACATCGGATACGACGCCTCGAACTTCTGCGCCTACCCGCAGTCCCCGCCCGCCGCGTCCGCGCCTGCGTCCGGGTCGCCGTCGCTCGCCTGCTCCCCGGCGTGCTCCCTCGACCTCACGAGCTTCCGGATCGGCGGGAGCGGCGACGGGTGCAGGGACGTGCAGCTGCTCTGCTCCAGCCTCGGCCTCTCCGGCGTCGACGACTTCGCCGTCCCCGTCGCTGACTGGGAGGCGCACAAGGCCGGCCGCTCCTCCTTCTCCTCCTCCGCCTCCACCCCCAAGCCGCGCGAGGAACCCCCCGCGAGGGACTCTCCTGTCCGCCGCGAGGTTGCCGCCGAGGAGGAGCCGCCCTCCCTGCCCGCCCCCGCCGCTGCTCCCGTGCTCCCGGCGAAGGAAACGCCCAGGTCCGTGGCAATTGAAGCTCCAGCGCCCCTATTACGGGTGGATCCGTGGGAGCCAGCCCGTCCAGATGTGAGGAAGGCGAGCGGCGAGGGAGGGATCAAGGGCGTGCGGCCGCCGCCGGTCGTGCTCAAGCCGCCGCCGTCGATGGTACGGCCGGCGGTCTGCGTGGTGGAGTCCACGTGGGATATCTTGCGGTCGTTCGCGCCGGAGGAGGATAGCCATGCTCACGCCCCGGCGAGCAGATCTGGTGGTGATTCCGCATGCCAGGACGCGGGTGAGGAGGAGGATGATGCGGCCGCGGTGTTGACGCTGGAGGAGCTCAGGCTAGGGGAGACGTCCGAGGAATTCACGGGCACGTCTTCGCTGTCGACGACGAACGATGACGAAACGTCGAGCACAACCACCGAGTCCATGTTCTACATCTCGCCGAATGGGAGGTTTAGGAGGAAGATCCGGTCGTGGAACCGGGGGATGCTCCTGGGAAGTGGCTCGTTTGGGACAGTCTTCGAGGGGATCAGCGACGAGGGTGTCTTCTTTGCTGTCAAAGAGGTCTGCTTGTGTGATCAAGGGAGCAATGCACAGCAGTGCATTTTTCAGCTTGAGCAGGAAATCGCACTTTTGAGTCAGTTTGAACATGAAAATATTGTGCAGTACTATGGTACCGACAAAGAGGACTCAAAACTGTACATCTTCCTTGAATTAGTCACCCAAGGATCTCTTGCATCTTTGTATCAGAAGTACAGACTGCGAGATACTCATGTTTCAGCATATACAAGACAGATTCTTAATGGGTTGACTTACCTGCATGAACGAAACATTGTTCATAGGGATATCAAATGTGCCAATATATTGGTGCATGCCAATGGATCCGTGAAACTTGCTGACTTTGGTCTTGCTAAGGAGGTTGTCAATCCCAAGACAACATATGGACCTGAAGCTGATATATGGAGTCTGGGCTGCACAGTCCTAGAGATGTTGACACGTCAACTTCCCTATCCTGGTCTGGAATGGACACAAGCTTTATACAGGATTGGGAAGGGGGAACCACCAGCAATTCCAAATTGCCTTTCTAGGGATGCTCGTGATTTTATAAGCCAGTGCGTAAAACCCAATCCGCAAGACAGACCCTCTGCAGCAAAGCTGCTGGAGCATCCTTTCGTTAATAGGTCAATGCGGTCGATAAGGTCTATGAGGACATCTTCGCGCTCAAATTCATCGGTACGCGGCATAAATGGATAG

More
Protein seq

MGPPAAPPSPSSSSGGSSRRRRRLERRNAAKHIGYDASNFCAYPQSPPAASAPASGSPSLACSPACSLDLTSFRIGGSGDGCRDVQLLCSSLGLSGVDDFAVPVADWEAHKAGRSSFSSSASTPKPREEPPARDSPVRREVAAEEEPPSLPAPAAAPVLPAKETPRSVAIEAPAPLLRVDPWEPARPDVRKASGEGGIKGVRPPPVVLKPPPSMVRPAVCVVESTWDILRSFAPEEDSHAHAPASRSGGDSACQDAGEEEDDAAAVLTLEELRLGETSEEFTGTSSLSTTNDDETSSTTTESMFYISPNGRFRRKIRSWNRGMLLGSGSFGTVFEGISDEGVFFAVKEVCLCDQGSNAQQCIFQLEQEIALLSQFEHENIVQYYGTDKEDSKLYIFLELVTQGSLASLYQKYRLRDTHVSAYTRQILNGLTYLHERNIVHRDIKCANILVHANGSVKLADFGLAKEVVNPKTTYGPEADIWSLGCTVLEMLTRQLPYPGLEWTQALYRIGKGEPPAIPNCLSRDARDFISQCVKPNPQDRPSAAKLLEHPFVNRSMRSIRSMRTSSRSNSSVRGING

Function Mitogen-activated protein kinase kinase kinase 1 [UniProtKB/Swiss-Prot:Q39008]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_03G011430 OsN22_03G011430_01 Chr03 8785543 8790095 - NAM
CDS seq

ATGGGGCCGCCCGCCGCGCCGCCGTCGCCGTCGTCGTCGTCTGGGGGCTCGTCGAGGCGGCGCCGCCGGCTCGAACGCCGGAACGCCGCGAAGCACATCGGATACGACGCCTCGAACTTCTGCGCCTACCCGCAGTCCCCGCCCGCCGCGTCCGCGCCTGCGTCCGGGTCGCCGTCGCTCGCCTGCTCCCCGGCGTGCTCCCTCGACCTCACGAGCTTCCGGATCGGCGGGAGCGGCGACGGGTGCAGGGACGTGCAGCTGCTCTGCTCCAGCCTCGGCCTCTCCGGCGTCGACGACTTCGCCGTCCCCGTCGCTGACTGGGAGGCGCACAAGGCCGGCCGCTCCTCCTTCTCCTCCTCCGCCTCCACCCCCAAGCCGCGCGAGGAACCCCCCGCGAGGGACTCTCCTGTCCGCCGCGAGGTTGCCGCCGAGGAGGAGCCGCCCTCCCTGCCCGCCCCCGCCGCTGCTCCCGTGCTCCCGGCGAAGGAAACGCCCAGGTCCGTGGCAATTGAAGCTCCAGCGCCCCTATTACGGGTGGATCCGTGGGAGCCAGCCCGTCCAGATGTGAGGAAGGCGAGCGGCGAGGGAGGGATCAAGGGCGTGCGGCCGCCGCCGGTCGTGCTCAAGCCGCCGCCGTCGATGGTACGGCCGGCGGTCTGCGTGGTGGAGTCCACGTGGGATATCTTGCGGTCGTTCGCGCCGGAGGAGGATAGCCATGCTCACGCCCCGGCGAGCAGATCTGGTGGTGATTCCGCATGCCAGGACGCGGGTGAGGAGGAGGATGATGCGGCCGCGGTGTTGACGCTGGAGGAGCTCAGGCTAGGGGAGACGTCCGAGGAATTCACGGGCACGTCTTCGCTGTCGACGACGAACGATGACGAAACGTCGAGCACAACCACCGAGTCCATGTTCTACATCTCGCCGAATGGGAGGTTTAGGAGGAAGATCCGGTCGTGGAACCGGGGGATGCTCCTGGGAAGTGGCTCGTTTGGGACAGTCTTCGAGGGGATCAGCGACGAGGGTGTCTTCTTTGCTGTCAAAGAGGTCTGCTTGTGTGATCAAGGGAGCAATGCACAGCAGTGCATTTTTCAGCTTGAGCAGGAAATCGCACTTTTGAGTCAGTTTGAACATGAAAATATTGTGCAGTACTATGGTACCGACAAAGAGGACTCAAAACTGTACATCTTCCTTGAATTAGTCACCCAAGGATCTCTTGCATCTTTGTATCAGAAGTACAGACTGCGAGATACTCATGTTTCAGCATATACAAGACAGATTCTTAATGGGTTGACTTACCTGCATGAACGAAACATTGTTCATAGGGATATCAAATGTGCCAATATATTGGTGCATGCCAATGGATCCGTGAAACTTGCTGACTTTGGTCTTGCTAAGGAGGTTGTCAATCCCAAGACAACATATGGACCTGAAGCTGATATATGGAGTCTGGGCTGCACAGTCCTAGAGATGTTGACACGTCAACTTCCCTATCCTGGTCTGGAATGGACACAAGCTTTATACAGGATTGGGAAGGGGGAACCACCAGCAATTCCAAATTGCCTTTCTAGGGATGCTCGTGATTTTATAAGCCAGTGCGTAAAACCCAATCCGCAAGACAGACCCTCTGCAGCAAAGCTGCTGGAGCATCCTTTCGTTAATAGGTCAATGCGGTCGATAAGGTCTATGAGGACATCTTCGCGCTCAAATTCATCGGTACGCGGCATAAATGGATAG

More
Protein seq

MGPPAAPPSPSSSSGGSSRRRRRLERRNAAKHIGYDASNFCAYPQSPPAASAPASGSPSLACSPACSLDLTSFRIGGSGDGCRDVQLLCSSLGLSGVDDFAVPVADWEAHKAGRSSFSSSASTPKPREEPPARDSPVRREVAAEEEPPSLPAPAAAPVLPAKETPRSVAIEAPAPLLRVDPWEPARPDVRKASGEGGIKGVRPPPVVLKPPPSMVRPAVCVVESTWDILRSFAPEEDSHAHAPASRSGGDSACQDAGEEEDDAAAVLTLEELRLGETSEEFTGTSSLSTTNDDETSSTTTESMFYISPNGRFRRKIRSWNRGMLLGSGSFGTVFEGISDEGVFFAVKEVCLCDQGSNAQQCIFQLEQEIALLSQFEHENIVQYYGTDKEDSKLYIFLELVTQGSLASLYQKYRLRDTHVSAYTRQILNGLTYLHERNIVHRDIKCANILVHANGSVKLADFGLAKEVVNPKTTYGPEADIWSLGCTVLEMLTRQLPYPGLEWTQALYRIGKGEPPAIPNCLSRDARDFISQCVKPNPQDRPSAAKLLEHPFVNRSMRSIRSMRTSSRSNSSVRGING

More
Gene Transcript Chromosome Start End Strand Source
OsN22_03G011430 OsN22_03G011430_02 Chr03 8785847 8790091 - IsoSeq
CDS seq

ATGACGAAACGTCGAGCACAACCACCGAGTCCATGTTCTACATCTCGCCGAATGGGAGGTTTAGGAGGAAGATCCGGTCGTGGAACCGGGGGATGCTCCTGGGAAGTGGCTCGTTTGGGACAGTCTTCGAGGGGATCAGCGACGAGGGTGTCTTCTTTGCTGTCAAAGAGGTCTGCTTGTGTGATCAAGGGAGCAATGCACAGCAGTGCATTTTTCAGCTTGAGCAGGAAATCGCAC

More
Protein seq

MTKRRAQPPSPCSTSRRMGGLGGRSGRGTGGCSWEVARLGQSSRGSATRVSSLLSKRSACVIKGAMHSSAFFSLSRKSH

OsN22_03G011430_02OsN22_03G011430_01AS8785443 bp8786000 bp8787000 bp8788000 bp8789000 bp8790000 bp8791000 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
SE Chr03 8786887 8787401 - OsN22_03G011430_02 OsN22_03G011430_01,OsN22_03G011430_02 All

Expression

Leaf Root Panicle
FPKM 0.602168 1.941185 1.196787

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0262200 RBH 2.877811 2.450112 5.238444
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g15570 RBH 1.953127 1.580384 1.233908
Nipponbare | IRGSP 1.0 | RAP-db Os03g0262200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0011760 RBH 0.301367 14.233616 4.549437
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0011590 RBH 0.253523 3.334927 3.191709
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0011610 RBH 2.005717 5.757452 6.903831
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0011580 RBH 0.344124 0.256577 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0011440 RBH 7.510090 16.335958 14.836373
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0144700 RBH 8.924344 72.2642975 16.693718
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0011330 RBH 0.242589 0.681625 0.794813
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0145900 RBH 10.686834 79.662056 23.2518685
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0011480 RBH 0.536792 0.120688 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0011550 RBH 1.330814 11.847241 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0011530 RBH 6.516989 11.837562 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0011500 RBH 0.678083 0.905852 1.371943
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0011440 RBH 0.186387 9.849440 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G030970 RBH 0.764008 2.354995 1.242042
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0011300 RBH 1.190235 21.003841 6.375943
Powered by

© 2021-2025 Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.