Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_03g0011580 OGI:03023140 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr03:8900001-8904632
Gene Symbol -
DNA seq

CATTGTGGATGCTCTAATCAAGAGAGGAAAACAAACGGCATAGACAGAGACATGTAAATATTTTTTTCCCACTATTTTTTTTGTGAATTATTTTCTGTCCCTCTTCTTTTGTGAATTACACGCAAGTCAAACAACGCGTAAAAACTGAGAAGTGATCGTCAAGACGCCAAATGCCAATCGCGACGTGGCTGTAAACGCCAAACTGCCAACTGGAGAACAACAACCAACCAATCGTAGCTTTTCCTTTGGAATACCCGTACCACTGCACAGGAATCGTTGATGAGCTGCCGTACACCCTTTGTTCTAACAAGAAGACATCCACGGCAATTCCAACCTAAGCTACTGTCATCGGAAGTTCCAAAGTTTGGCAAAGCACGGCATATGATGGCAAAGACAAATAAATCACCACCACGAACATGCATATTTACATCGTCAGTTCCTACTTACACTCATGCGCTTGAATGCACATTTAACCTATTCTCCGGGCTGAATATTAGCCGCTGACTAAACCACGACATATCCCCTCGCAGCAAACTATGAGAAAGAATCAACAAATGAAACGCAATGGTTGGGGTTGACGACTGTGCTGTTGACAATATTGCTTCCCGGTAACGAATCGTCCTCCCCGGCCAGCTCCACATGATTAGCAGAACTAATATCTGCAAGAGAGAATATGCACGCCAGTCAAAAGTCAGATTAACCACGCGCTCAATGTCAACCTAGTGCGCCACAACCGGGCAGCTGACGGTAACAACTTTGTATTATATTTGATATGGACGAATCTGTGTTCCGGCGATGATGTGTGAAAATCGTTTGCCCAACTTTTCTTTCGAAGCAAAACAATTGTGTAGGAACAGTTTAAATATTTACTATTTTTGCATGAGTGGAAAGCAAGTTAAAGAAGACTAACTTACCATTCCACCGATATTCTGAAGCCGTCCTCAATTCTATCCATTTATGCCGCGTACCGATGAATTTGAGCGCGAAGATGTCCTCATAGACCTTATCGACCGCATTGACCTATTAACGAAAGGATGCTCCAGCAGCTTTGCTGCAGAGGGTCTGTCTTGCGGATTGGGTTTTACGCACTGGCTTATAAAATCACGAGCATCCCTAGAAAGGCAATTTGGAATTGCTGGTGGTTCCCCCTTCCCAATCCTGTATAAAGCTTGTGTCTGCAGAACAAGTTGAGAAAATGGGGTAAATGCAAAAAGGAAACAAAGTAATATGCATACTGGATAATTATCAAACTTGGAACCAACACCATAACTGAATTTGGAGGAGCTAAATTAGATTCCTGATGAACAATAACTCACCCATTCCAGACCAGGATAGGGAAGTTGACGTGTCAACATCTCTAGGACTGTGCAGCCCAGACTCCATATATCAGCTTCAGGTCCATATGTTGTCTTGGGATTGACAACCTGAAATTTCATCATTATCTTAGGAGGCAACTACAACATTATCTAACATCAATGCATTATAAACACATTTTTGGCTTTTTACCTCCTACCTATTAGTTTGTTATTCTAGATAAACCATCAAAATAAAAGAAGGTAAACAAATACTACCTCTGTTTCAAGTTATAAGATTTTCTAGTATTGCCTACATTCATATATATGTTAATGAATCTAGATATATATGTGTGCCTAGATTCATTAACATCTATATGAATGTGGGCAATGCTAGAAAATCTTATAATATGAAACGGAGGAAGTAAAACCCAAGCATGTCCAAATCTAATCTAATAGAAATATTGTGCCATACCTCAGGTGCCATCCAATAAACAGTTCCTTTGCACGATTTAAGCACGTTGAATTTGGTAATCTGAGAGATTTGACAGAAATCAATCATATAAATGAGATAAATTTTAAAATAATAACTGAAACATTCAAAGATTAAAAAGGAACATAAAGATTTCGCGAGAGTAAGCAGACCTCCTTAGCAAGACCAAAGTCAGCAAGTTTCACGGATCCATTGGCATGCACCAATATATTGGCACATTTGATATCCCTGCAAGACGAGATTTGAACTGTTATTCACTTATTCAGAATAAATGTACAGTACCAGTTCCTTAAGAATCTTCAAGCTAACGATAAAAATCAGTGAGCAGGCATTAATTAGAATAACTGTCAGCTGAAGTGAAAAAAAAAAACAATAAGCCTCCTTAGAAGGCTAAACAGCAGATATGCTGATTCAGCTAATGTTATTACCTATGAACAATGTTTCGTTCATGCAGGTAAGTCAACCCATTAAGAATCTGTCTTGTATATGCTGAAACATGAGTATCTCGCAGTCTGTACTTCTGATACAAAGATGCAAGAGATCCTTGGGTGACTAATTCAAGGAAGATGTACAGTTTTGAGTCCTCCTGCAGTAGTCACAAGAATGGTTCAATATGAGCCTTAAAAGAAAAAAAGTACAAGAAAACTAGAAATTTACATACAGCCCAATAGCAAATGGTGCTTCAACAAAATGATGAATGGTCGATCAATAACTTACTTTGTCGGTACCATAGTACTGCACAATATTTTCATGTTCAAACTGACTCAAAAGTGCGATTTCCTAAAATATGAAAAGAAGTTAGGACAGATCACATTTACAATACAACAGAACCAGTAAGATATTATAGCCCTGGGCCCTGGCATTATTGACAAACAAAAAGGAAACACCAACCTGCTCAAGCTGAAAAATGCACTGCTGTGCATTGCTCCCTTGATCACACAAGCAGACCTCTTTGACAGCAAAGAAGACACCCTCGCTGTAAAACATCAAATCATAAGATGTCGATATCAACTATTCCGGCATGTAAGAGACATGTGTTATGCAAACATTACAGCAGCCTATACTAAGAATAACTGTTGCAATTGAACACCACATAAAAGGAACAACAGGTATTACAATGATTCATTTAGGACAGCCAGTTCATGTGCATCTTCTAGAAGCTAAGTTTCACATGTTTCAGAACCCTTAGTGATTAAACATATGTTTACATCATGTCATATTGAACACAACAAATCAAATAAATAAAGTACTATTACATTCAACATTCTGACTCTAGCGGAATTCTGATTGTCTACAGCGTAGGGTTATGCTATTCAAGTAGTTGAAAATGAAATCATGTTGATGATTCAATTACCACTTACTAGTACCCTACACGCCATCTAGCAACTGTACTTAAAGAGATATAATTGGAGACATACAGTGTACAATCAATCAGAGAATCAATTTTCCTAAATTCGGGTTAACAATGGCTTCCAAGATATGCCTTATGCTATCTTAGGGCAGGTTAAATTGTTGGGTCTCACAAATTCTCGACCACAAAGTGAACAATCAGCATATAGAAATCATAAGCACAAAGTGAACAATCAACATATAGAAATCATAAGCACAAAGTGAGCGATCAGCATATAGAAATCATAAAATTTACTCTTTAGAGCACTTACTCGCTGATCCCCTCGAAGACTGTCCCAAACGAGCCACTTCCCAGGAGCATCCCCCGGTTCCACGACCGGATCTTCCTCCTAAACCTCCCATTCGGCGAGATGTAGAACATGGACTCGGTGGTTGTGCTCGACGTTTCGTCATCGTTCGTCGTCGACAGCGAAGACGTGCCCGTGAATTCCTCGGACGTCTCCCCTAGCCTGAGCTCCTCCAGCGTCAACACCGCGGCCGCATCATCCTCCTCCTCACCCGCGTCCTGGCATGCGGAATCACCACCAGATCTGCTCGCCGGGGCGTGAGCATGGCTATCCTCCTCCGGCGCGAACGACCGCAAGATATCCCACGTGGACTCCACCACGCAGACCGCCGGCCGTACCATCGACGGCGGCGGCTTGAGCACGACCGGCGGCGGCCGCACGCCCTTGATCCCTCCCTCGCCGCTCGCCTTCCTCACATCTGGACGGGCTGGCTCCCACGGATCCACCCGTAATAGGGGCGCTGGAGCTTCAATTGCCACGGACCTGGGCGTTTCCTTCGCCGGGAGCACGGGAGCAGCGGCGGGGGCGGGCAGGGAGGGCGGCTCCTCCTCGGCGGCAACCTCGCGGCGGACAGGAGAGTCCCTCGCGGGGGGTTCCTCGCGCGGCTTGGGGGTGGAGGCGGAGGAGGAGAAGGAGGAGCGGCCGGCCTTGTGCGCCTCCCAGTCAGCGACGGGGACGGCGAAGTCGTCGACGCCGGAGAGGCCGAGGCTGGAGCAGAGCAGCTGCACGTCCCTGCACCCGTCGCCGCTCCCGCCGATCCGGAAGCTCGTGAGGTCGAGGGAGCACGCCGGGGAGCAGGCGAGCGACGGCGACCCGGACGCAGGCGCGGACGCGGCGGGCGGGGACTGCGGGTAGGCGCAGAAGTTCGAGGCGTCGTATCCGATGTGCTTCGCGGCGTTCCGGCGTTCGAGCCGGCGGCGCCGCCTCGACGAGCCCCCAGACGACGACGACGGCGACGGCGGCGCGGCGGGCGGCCCCATCGTCGGCCTCAGCTCATGGACGAGAGAGAGAGGGGAAGGATGGTTCGTGATAAGTGCCTAGCGAGCGAGACTCCTCTTGGCTTGGCTTTGGGTTTGGGGGAGAAGAGGAGAGAAGAGAAGGGAAGACGGCAAGCTGCAGATTTTTATTTTTTTTCTCCGTTTCGCCCACT

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CDS seq

ATGGGGCCGCCCGCCGCGCCGCCGTCGCCGTCGTCGTCGTCTGGGGGCTCGTCGAGGCGGCGCCGCCGGCTCGAACGCCGGAACGCCGCGAAGCACATCGGATACGACGCCTCGAACTTCTGCGCCTACCCGCAGTCCCCGCCCGCCGCGTCCGCGCCTGCGTCCGGGTCGCCGTCGCTCGCCTGCTCCCCGGCGTGCTCCCTCGACCTCACGAGCTTCCGGATCGGCGGGAGCGGCGACGGGTGCAGGGACGTGCAGCTGCTCTGCTCCAGCCTCGGCCTCTCCGGCGTCGACGACTTCGCCGTCCCCGTCGCTGACTGGGAGGCGCACAAGGCCGGCCGCTCCTCCTTCTCCTCCTCCGCCTCCACCCCCAAGCCGCGCGAGGAACCCCCCGCGAGGGACTCTCCTGTCCGCCGCGAGGTTGCCGCCGAGGAGGAGCCGCCCTCCCTGCCCGCCCCCGCCGCTGCTCCCGTGCTCCCGGCGAAGGAAACGCCCAGGTCCGTGGCAATTGAAGCTCCAGCGCCCCTATTACGGGTGGATCCGTGGGAGCCAGCCCGTCCAGATGTGAGGAAGGCGAGCGGCGAGGGAGGGATCAAGGGCGTGCGGCCGCCGCCGGTCGTGCTCAAGCCGCCGCCGTCGATGGTACGGCCGGCGGTCTGCGTGGTGGAGTCCACGTGGGATATCTTGCGGTCGTTCGCGCCGGAGGAGGATAGCCATGCTCACGCCCCGGCGAGCAGATCTGGTGGTGATTCCGCATGCCAGGACGCGGGTGAGGAGGAGGATGATGCGGCCGCGGTGTTGACGCTGGAGGAGCTCAGGCTAGGGGAGACGTCCGAGGAATTCACGGGCACGTCTTCGCTGTCGACGACGAACGATGACGAAACGTCGAGCACAACCACCGAGTCCATGTTCTACATCTCGCCGAATGGGAGGTTTAGGAGGAAGATCCGGTCGTGGAACCGGGGGATGCTCCTGGGAAGTGGCTCGTTTGGGACAGTCTTCGAGGGGATCAGCGACGAGGGTGTCTTCTTTGCTGTCAAAGAGGTCTGCTTGTGTGATCAAGGGAGCAATGCACAGCAGTGCATTTTTCAGCTTGAGCAGGAAATCGCACTTTTGAGTCAGTTTGAACATGAAAATATTGTGCAGTACTATGGTACCGACAAAGAGGACTCAAAACTGTACATCTTCCTTGAATTAGTCACCCAAGGATCTCTTGCATCTTTGTATCAGAAGTACAGACTGCGAGATACTCATGTTTCAGCATATACAAGACAGATTCTTAATGGGTTGACTTACCTGCATGAACGAAACATTGTTCATAGGGATATCAAATGTGCCAATATATTGGTGCATGCCAATGGATCCGTGAAACTTGCTGACTTTGGTCTTGCTAAGGAGTTGCCTCCTAAGATAATGATGAAATTTCAGGTTGTCAATCCCAAGACAACATATGGACCTGAAGCTGATATATGGAGTCTGGGCTGCACAGTCCTAGAGATGTTGACACGTCAACTTCCCTATCCTGGTCTGGAATGGACACAAGCTTTATACAGGATTGGGAAGGGGGAACCACCAGCAATTCCAAATTGCCTTTCTAGGGATGCTCGTGATTTTATAAGCCAGTGCGTAAAACCCAATCCGCAAGACAGACCCTCTGCAGCAAAGCTGCTGGAGCATCCTTTCGTTAATAGGTCAATGCGGTCGATAAGGTCTATGAGGACATCTTCGCGCTCAAATTCATCGGTACGCGGCATAAATGGATAG

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Protein seq

MGPPAAPPSPSSSSGGSSRRRRRLERRNAAKHIGYDASNFCAYPQSPPAASAPASGSPSLACSPACSLDLTSFRIGGSGDGCRDVQLLCSSLGLSGVDDFAVPVADWEAHKAGRSSFSSSASTPKPREEPPARDSPVRREVAAEEEPPSLPAPAAAPVLPAKETPRSVAIEAPAPLLRVDPWEPARPDVRKASGEGGIKGVRPPPVVLKPPPSMVRPAVCVVESTWDILRSFAPEEDSHAHAPASRSGGDSACQDAGEEEDDAAAVLTLEELRLGETSEEFTGTSSLSTTNDDETSSTTTESMFYISPNGRFRRKIRSWNRGMLLGSGSFGTVFEGISDEGVFFAVKEVCLCDQGSNAQQCIFQLEQEIALLSQFEHENIVQYYGTDKEDSKLYIFLELVTQGSLASLYQKYRLRDTHVSAYTRQILNGLTYLHERNIVHRDIKCANILVHANGSVKLADFGLAKELPPKIMMKFQVVNPKTTYGPEADIWSLGCTVLEMLTRQLPYPGLEWTQALYRIGKGEPPAIPNCLSRDARDFISQCVKPNPQDRPSAAKLLEHPFVNRSMRSIRSMRTSSRSNSSVRGING

Function Mitogen-activated protein kinase kinase kinase 1 [UniProtKB/Swiss-Prot:Q39008]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_03g0011580 OsARC_03g0011580.01 Chr03 8900001 8904632 - NAM
CDS seq

ATGGGGCCGCCCGCCGCGCCGCCGTCGCCGTCGTCGTCGTCTGGGGGCTCGTCGAGGCGGCGCCGCCGGCTCGAACGCCGGAACGCCGCGAAGCACATCGGATACGACGCCTCGAACTTCTGCGCCTACCCGCAGTCCCCGCCCGCCGCGTCCGCGCCTGCGTCCGGGTCGCCGTCGCTCGCCTGCTCCCCGGCGTGCTCCCTCGACCTCACGAGCTTCCGGATCGGCGGGAGCGGCGACGGGTGCAGGGACGTGCAGCTGCTCTGCTCCAGCCTCGGCCTCTCCGGCGTCGACGACTTCGCCGTCCCCGTCGCTGACTGGGAGGCGCACAAGGCCGGCCGCTCCTCCTTCTCCTCCTCCGCCTCCACCCCCAAGCCGCGCGAGGAACCCCCCGCGAGGGACTCTCCTGTCCGCCGCGAGGTTGCCGCCGAGGAGGAGCCGCCCTCCCTGCCCGCCCCCGCCGCTGCTCCCGTGCTCCCGGCGAAGGAAACGCCCAGGTCCGTGGCAATTGAAGCTCCAGCGCCCCTATTACGGGTGGATCCGTGGGAGCCAGCCCGTCCAGATGTGAGGAAGGCGAGCGGCGAGGGAGGGATCAAGGGCGTGCGGCCGCCGCCGGTCGTGCTCAAGCCGCCGCCGTCGATGGTACGGCCGGCGGTCTGCGTGGTGGAGTCCACGTGGGATATCTTGCGGTCGTTCGCGCCGGAGGAGGATAGCCATGCTCACGCCCCGGCGAGCAGATCTGGTGGTGATTCCGCATGCCAGGACGCGGGTGAGGAGGAGGATGATGCGGCCGCGGTGTTGACGCTGGAGGAGCTCAGGCTAGGGGAGACGTCCGAGGAATTCACGGGCACGTCTTCGCTGTCGACGACGAACGATGACGAAACGTCGAGCACAACCACCGAGTCCATGTTCTACATCTCGCCGAATGGGAGGTTTAGGAGGAAGATCCGGTCGTGGAACCGGGGGATGCTCCTGGGAAGTGGCTCGTTTGGGACAGTCTTCGAGGGGATCAGCGACGAGGGTGTCTTCTTTGCTGTCAAAGAGGTCTGCTTGTGTGATCAAGGGAGCAATGCACAGCAGTGCATTTTTCAGCTTGAGCAGGAAATCGCACTTTTGAGTCAGTTTGAACATGAAAATATTGTGCAGTACTATGGTACCGACAAAGAGGACTCAAAACTGTACATCTTCCTTGAATTAGTCACCCAAGGATCTCTTGCATCTTTGTATCAGAAGTACAGACTGCGAGATACTCATGTTTCAGCATATACAAGACAGATTCTTAATGGGTTGACTTACCTGCATGAACGAAACATTGTTCATAGGGATATCAAATGTGCCAATATATTGGTGCATGCCAATGGATCCGTGAAACTTGCTGACTTTGGTCTTGCTAAGGAGGTTGTCAATCCCAAGACAACATATGGACCTGAAGCTGATATATGGAGTCTGGGCTGCACAGTCCTAGAGATGTTGACACGTCAACTTCCCTATCCTGGTCTGGAATGGACACAAGCTTTATACAGGATTGGGAAGGGGGAACCACCAGCAATTCCAAATTGCCTTTCTAGGGATGCTCGTGATTTTATAAGCCAGTGCGTAAAACCCAATCCGCAAGACAGACCCTCTGCAGCAAAGCTGCTGGAGCATCCTTTCGTTAATAGGTCAATGCGGTCGATAAGGTCTATGAGGACATCTTCGCGCTCAAATTCATCGGTACGCGGCATAAATGGATAG

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Protein seq

MGPPAAPPSPSSSSGGSSRRRRRLERRNAAKHIGYDASNFCAYPQSPPAASAPASGSPSLACSPACSLDLTSFRIGGSGDGCRDVQLLCSSLGLSGVDDFAVPVADWEAHKAGRSSFSSSASTPKPREEPPARDSPVRREVAAEEEPPSLPAPAAAPVLPAKETPRSVAIEAPAPLLRVDPWEPARPDVRKASGEGGIKGVRPPPVVLKPPPSMVRPAVCVVESTWDILRSFAPEEDSHAHAPASRSGGDSACQDAGEEEDDAAAVLTLEELRLGETSEEFTGTSSLSTTNDDETSSTTTESMFYISPNGRFRRKIRSWNRGMLLGSGSFGTVFEGISDEGVFFAVKEVCLCDQGSNAQQCIFQLEQEIALLSQFEHENIVQYYGTDKEDSKLYIFLELVTQGSLASLYQKYRLRDTHVSAYTRQILNGLTYLHERNIVHRDIKCANILVHANGSVKLADFGLAKEVVNPKTTYGPEADIWSLGCTVLEMLTRQLPYPGLEWTQALYRIGKGEPPAIPNCLSRDARDFISQCVKPNPQDRPSAAKLLEHPFVNRSMRSIRSMRTSSRSNSSVRGING

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Gene Transcript Chromosome Start End Strand Source
OsARC_03g0011580 OsARC_03g0011580.02 Chr03 8900153 8904632 - NAM
CDS seq

ATGGGGCCGCCCGCCGCGCCGCCGTCGCCGTCGTCGTCGTCTGGGGGCTCGTCGAGGCGGCGCCGCCGGCTCGAACGCCGGAACGCCGCGAAGCACATCGGATACGACGCCTCGAACTTCTGCGCCTACCCGCAGTCCCCGCCCGCCGCGTCCGCGCCTGCGTCCGGGTCGCCGTCGCTCGCCTGCTCCCCGGCGTGCTCCCTCGACCTCACGAGCTTCCGGATCGGCGGGAGCGGCGACGGGTGCAGGGACGTGCAGCTGCTCTGCTCCAGCCTCGGCCTCTCCGGCGTCGACGACTTCGCCGTCCCCGTCGCTGACTGGGAGGCGCACAAGGCCGGCCGCTCCTCCTTCTCCTCCTCCGCCTCCACCCCCAAGCCGCGCGAGGAACCCCCCGCGAGGGACTCTCCTGTCCGCCGCGAGGTTGCCGCCGAGGAGGAGCCGCCCTCCCTGCCCGCCCCCGCCGCTGCTCCCGTGCTCCCGGCGAAGGAAACGCCCAGGTCCGTGGCAATTGAAGCTCCAGCGCCCCTATTACGGGTGGATCCGTGGGAGCCAGCCCGTCCAGATGTGAGGAAGGCGAGCGGCGAGGGAGGGATCAAGGGCGTGCGGCCGCCGCCGGTCGTGCTCAAGCCGCCGCCGTCGATGGTACGGCCGGCGGTCTGCGTGGTGGAGTCCACGTGGGATATCTTGCGGTCGTTCGCGCCGGAGGAGGATAGCCATGCTCACGCCCCGGCGAGCAGATCTGGTGGTGATTCCGCATGCCAGGACGCGGGTGAGGAGGAGGATGATGCGGCCGCGGTGTTGACGCTGGAGGAGCTCAGGCTAGGGGAGACGTCCGAGGAATTCACGGGCACGTCTTCGCTGTCGACGACGAACGATGACGAAACGTCGAGCACAACCACCGAGTCCATGTTCTACATCTCGCCGAATGGGAGGTTTAGGAGGAAGATCCGGTCGTGGAACCGGGGGATGCTCCTGGGAAGTGGCTCGTTTGGGACAGTCTTCGAGGGGATCAGCGACGAGGGTGTCTTCTTTGCTGTCAAAGAGGTCTGCTTGTGTGATCAAGGGAGCAATGCACAGCAGTGCATTTTTCAGCTTGAGCAGGAAATCGCACTTTTGAGTCAGTTTGAACATGAAAATATTGTGCAGTACTATGGTACCGACAAAGAGGACTCAAAACTGTACATCTTCCTTGAATTAGTCACCCAAGGATCTCTTGCATCTTTGTATCAGAAGTACAGACTGCGAGATACTCATGTTTCAGCATATACAAGACAGATTCTTAATGGGTTGACTTACCTGCATGAACGAAACATTGTTCATAGGGATATCAAATGTGCCAATATATTGGTGCATGCCAATGGATCCGTGAAACTTGCTGACTTTGGTCTTGCTAAGGAGTTGCCTCCTAAGATAATGATGAAATTTCAGGTTGTCAATCCCAAGACAACATATGGACCTGAAGCTGATATATGGAGTCTGGGCTGCACAGTCCTAGAGATGTTGACACGTCAACTTCCCTATCCTGGTCTGGAATGGACACAAGCTTTATACAGGATTGGGAAGGGGGAACCACCAGCAATTCCAAATTGCCTTTCTAGGGATGCTCGTGATTTTATAAGCCAGTGCGTAAAACCCAATCCGCAAGACAGACCCTCTGCAGCAAAGCTGCTGGAGCATCCTTTCGTTAATAGGTCAATGCGGTCGATAAGGTCTATGAGGACATCTTCGCGCTCAAATTCATCGGTACGCGGCATAAATGGATAG

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Protein seq

MGPPAAPPSPSSSSGGSSRRRRRLERRNAAKHIGYDASNFCAYPQSPPAASAPASGSPSLACSPACSLDLTSFRIGGSGDGCRDVQLLCSSLGLSGVDDFAVPVADWEAHKAGRSSFSSSASTPKPREEPPARDSPVRREVAAEEEPPSLPAPAAAPVLPAKETPRSVAIEAPAPLLRVDPWEPARPDVRKASGEGGIKGVRPPPVVLKPPPSMVRPAVCVVESTWDILRSFAPEEDSHAHAPASRSGGDSACQDAGEEEDDAAAVLTLEELRLGETSEEFTGTSSLSTTNDDETSSTTTESMFYISPNGRFRRKIRSWNRGMLLGSGSFGTVFEGISDEGVFFAVKEVCLCDQGSNAQQCIFQLEQEIALLSQFEHENIVQYYGTDKEDSKLYIFLELVTQGSLASLYQKYRLRDTHVSAYTRQILNGLTYLHERNIVHRDIKCANILVHANGSVKLADFGLAKELPPKIMMKFQVVNPKTTYGPEADIWSLGCTVLEMLTRQLPYPGLEWTQALYRIGKGEPPAIPNCLSRDARDFISQCVKPNPQDRPSAAKLLEHPFVNRSMRSIRSMRTSSRSNSSVRGING

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Gene Transcript Chromosome Start End Strand Source
OsARC_03g0011580 OsARC_03g0011580.03 Chr03 8900382 8904569 - IsoSeq
CDS seq

ATGACGAAACGTCGAGCACAACCACCGAGTCCATGTTCTACATCTCGCCGAATGGGAGGTTTAGGAGGAAGATCCGGTCGTGGAACCGGGGGATGCTCCTGGGAAGTGGCTCGTTTGGGACAGTCTTCGAGGGGATCAGCGACGAGGGTGTCTTCTTTGCTGTCAAAGAGGTCTGCTTGTGTGATCAAGGGAGCAATGCACAGCAGTGCATTTTTCAGCTTGAGCAGGAAATCGCAC

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Protein seq

MTKRRAQPPSPCSTSRRMGGLGGRSGRGTGGCSWEVARLGQSSRGSATRVSSLLSKRSACVIKGAMHSSAFFSLSRKSH

OsARC_03g0011580.03OsARC_03g0011580.02OsARC_03g0011580.01AS8900000 bp8901000 bp8902000 bp8903000 bp8904000 bp8905000 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A3 Chr03 8901424 8901938 - OsARC_03g0011580.02 OsARC_03g0011580.01,OsARC_03g0011580.02 All
SE Chr03 8901424 8901938 - OsARC_03g0011580.03 OsARC_03g0011580.01,OsARC_03g0011580.03 All

Expression

Leaf Root Panicle
FPKM 0.344124 0.256577 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0262200 RBH 2.877811 2.450112 5.238444
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g15570 RBH 1.953127 1.580384 1.233908
Nipponbare | IRGSP 1.0 | RAP-db Os03g0262200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0011760 RBH 0.301367 14.233616 4.549437
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0011590 RBH 0.253523 3.334927 3.191709
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0011610 RBH 2.005717 5.757452 6.903831
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0031420 RBH 0.224986 0.275400 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0011440 RBH 7.510090 16.335958 14.836373
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0144700 RBH 8.924344 72.2642975 16.693718
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0011330 RBH 0.242589 0.681625 0.794813
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0145900 RBH 10.686834 79.662056 23.2518685
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0011480 RBH 0.536792 0.120688 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0011550 RBH 1.330814 11.847241 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0011530 RBH 6.516989 11.837562 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0011500 RBH 0.678083 0.905852 1.371943
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0011440 RBH 0.186387 9.849440 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G011430 RBH 0.602168 1.941185 1.196787
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0011300 RBH 1.190235 21.003841 6.375943
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