Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0274600 | OGI:09025750 | 14/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:19343526-19345421 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGACCGCATGTTCTTGGTGGTTGTATTGATGGGTTTTGATTTCTTTGTCTTGCAGCTTCATGGATCCGATGCGCTCAAGTGGGTACTATGATTTCTTGAAGGATCCAGATCTGGCCCATCCTTTCGGTGAAGCAGCAACCCAAGGAGATTTTTCTCAACCCAGTGAGGACTTCCCCTATGCTCATGGCCAGTTCCCGCTCTTCTCGACGCAGCCACCAACAACAGTAGCAGTGAATGGTGGCCGGACTGCAGCCACCAGATCTAGGGTGAGGCAGCGTGTGCAAGCAAATCCTGCTGGACAAGATGATGGGAGGGGTAGGATGTACTACACTCGGGATGAGGACCTACGCCTGGTAAGAATCTTTGGTCTCATCTAATTTTTTTCATTCTCAGATCTGAACTAGATGTAGAAAAAATTGTGTTGTATGGGGACATGGAGAAAAGATGGATGAAAATGTTGTGATACTGGTTGATATGCATTGGAATGGTATAGAAAAATTGATTTGCATGTGGTTTAGAGTACATGAATAGATTGTTATGCGTACAGAAAAATTGATTTGTATGCTGTTTAGAGAACATGAATGATCCATGGTAGCATAAGATCTATATTTTGGTGGCAAGGAAGTACAAATTTCCATTGTGATTCATGCAGGTTGTATATGTATATGTTCTTTGGTAGTTGTGATGTGTCCCAGCTATAAATGAAATGTTTGTGGTAGGCAAATATCTTGTGGCTTGATGTGCTGAGTTATGTTTTATCAAGGGTATGTATGGAACAGTTAAGGATATGTATGTAGCATTGTTATTTATTGATTGTGGGTTAAACAAGGGTATGTATGGAACAGCTAAGGATATGTATGTAGCATTGTTATTTACTGATTGTGGGTTAAAGTTGGCTTTTTGTTGATGAAACTTGTTTCCTTATGGCTGATAGAACATCATTGTTTTATGTTAATGACTTGTGATGTTATTAGCATGATGAATTAATTTGTTGTATATAGCTTGAGCAATTTATGGTGTGCAGGTAAGTGCTTGGCTGGAGAATTCTACTGATGTAATTGAGGGTAATTCAAGGAAAGGTGACACTTATTGGAAGCAAGTTGCAGCTACATACAACTCAACCACAGAAGAAGAGAGGAAGAGGGACCCCAAGCACCTCAAGGGCCATTGGCACAAGAACACCAAGAAGGTCTCTGCCTTCAATGGGGTATATGTTCAGCTGAGAGATAACTATCAGAGTGGAAGGTCTGAAGAGATGCTGATTGAGCAAGCTTTGACAATGTATGAGAGTCGAGTTGGTCAGCCATTCGCACTGATGTATTGGTGGAAGGCCGTGTGTGATTCCCCAAAGTGGAATGCTCATGTTACTCTGCTGGGTCATGGAACTACCAAGATTAGGGCTGAGTTTGATGTGAATGCACCACCGGTTGAGCAGCCGGCTCAGGTCAGGCCTATGGGTATCAAGAGGGCCAAGATGGGCAAGCAGACTGACTACTCTGAAGAGGTGAAAGAGCTGATCAAGTCTCTGTGCAAGTCCCATGCAAAGCAAGAAGATGAGACAGCTGAGATGAAGGAGTTCCAGCAGAAGCTGTCTGAGGAGAAGCTTGAGGCAGCCAACGTCCTACTCAAGGCTGCTCAGGAGAAGACAAAGGGCAGGTTGATTGAGCAGCAGACTAAGTTGCTTGAGAGGTTTACACAGATGATTTCTGTGGACACAAGCCGTATGGAGACATGGGCTAGAGAGGCTCATATCAAGGCATGTACACTGATGTCAGACCAGCTGTGGGGCAAGGGGGCTACTGAGGAGTTGTGGGGCAAGGGGGCTACTGAGGAGGCATCAGGAGTTGTCATTTCACCGGGTCATCATTCTCATTGCCATCGTGGTGGAATCTGA
More
|
||||||||||
| CDS seq | ATGGACCGCATCTTCATGGATCCGATGCGCTCAAGTGGGTACTATGATTTCTTGAAGGATCCAGATCTGGCCCATCCTTTCGGTGAAGCAGCAACCCAAGGAGATTTTTCTCAACCCAGTGAGGACTTCCCCTATGCTCATGGCCAGTTCCCGCTCTTCTCGACGCAGCCACCAACAACAGTAGCAGTGAATGGTGGCCGGACTGCAGCCACCAGATCTAGGGTGAGGCAGCGTGTGCAAGCAAATCCTGCTGGACAAGATGATGGGAGGGGTAGGATGTACTACACTCGGGATGAGGACCTACGCCTGGTAAGTGCTTGGCTGGAGAATTCTACTGATGTAATTGAGGGTAATTCAAGGAAAGGTGACACTTATTGGAAGCAAGTTGCAGCTACATACAACTCAACCACAGAAGAAGAGAGGAAGAGGGACCCCAAGCACCTCAAGGGCCATTGGCACAAGAACACCAAGAAGGTCTCTGCCTTCAATGGGGTATATGTTCAGCTGAGAGATAACTATCAGAGTGGAAGGTCTGAAGAGATGCTGATTGAGCAAGCTTTGACAATGTATGAGAGTCGAGTTGGTCAGCCATTCGCACTGATGTATTGGTGGAAGGCCGTGTGTGATTCCCCAAAGTGGAATGCTCATGTTACTCTGCTGGGTCATGGAACTACCAAGATTAGGGCTGAGTTTGATGTGAATGCACCACCGGTTGAGCAGCCGGCTCAGGTCAGGCCTATGGGTATCAAGAGGGCCAAGATGGGCAAGCAGACTGACTACTCTGAAGAGGTGAAAGAGCTGATCAAGTCTCTGTGCAAGTCCCATGCAAAGCAAGAAGATGAGACAGCTGAGATGAAGGAGTTCCAGCAGAAGCTGTCTGAGGAGAAGCTTGAGGCAGCCAACGTCCTACTCAAGGCTGCTCAGGAGAAGACAAAGGGCAGGTTGATTGAGCAGCAGACTAAGTTGCTTGAGAGGTTTACACAGATGATTTCTGTGGACACAAGCCGTATGGAGACATGGGCTAGAGAGGCTCATATCAAGGCATGTACACTGATGTCAGACCAGCTGTGGGGCAAGGGGGCTACTGAGGAGTTGTGGGGCAAGGGGGCTACTGAGGAGGCATCAGGAGTTGTCATTTCACCGGGTCATCATTCTCATTGCCATCGTGGTGGAATCTGA
More
|
||||||||||
| Protein seq | MDRIFMDPMRSSGYYDFLKDPDLAHPFGEAATQGDFSQPSEDFPYAHGQFPLFSTQPPTTVAVNGGRTAATRSRVRQRVQANPAGQDDGRGRMYYTRDEDLRLVSAWLENSTDVIEGNSRKGDTYWKQVAATYNSTTEEERKRDPKHLKGHWHKNTKKVSAFNGVYVQLRDNYQSGRSEEMLIEQALTMYESRVGQPFALMYWWKAVCDSPKWNAHVTLLGHGTTKIRAEFDVNAPPVEQPAQVRPMGIKRAKMGKQTDYSEEVKELIKSLCKSHAKQEDETAEMKEFQQKLSEEKLEAANVLLKAAQEKTKGRLIEQQTKLLERFTQMISVDTSRMETWAREAHIKACTLMSDQLWGKGATEELWGKGATEEASGVVISPGHHSHCHRGGI |
||||||||||
| Function | Glutathione S-transferase T3 [UniProtKB/Swiss-Prot:Q9FHE1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0274600 | OsMH63_12T0274600-mRNA-1 | Chr12 | 19343526 | 19345421 | + | maker | ||
| CDS seq | ATGGACCGCATCTTCATGGATCCGATGCGCTCAAGTGGGTACTATGATTTCTTGAAGGATCCAGATCTGGCCCATCCTTTCGGTGAAGCAGCAACCCAAGGAGATTTTTCTCAACCCAGTGAGGACTTCCCCTATGCTCATGGCCAGTTCCCGCTCTTCTCGACGCAGCCACCAACAACAGTAGCAGTGAATGGTGGCCGGACTGCAGCCACCAGATCTAGGGTGAGGCAGCGTGTGCAAGCAAATCCTGCTGGACAAGATGATGGGAGGGGTAGGATGTACTACACTCGGGATGAGGACCTACGCCTGGTAAGTGCTTGGCTGGAGAATTCTACTGATGTAATTGAGGGTAATTCAAGGAAAGGTGACACTTATTGGAAGCAAGTTGCAGCTACATACAACTCAACCACAGAAGAAGAGAGGAAGAGGGACCCCAAGCACCTCAAGGGCCATTGGCACAAGAACACCAAGAAGGTCTCTGCCTTCAATGGGGTATATGTTCAGCTGAGAGATAACTATCAGAGTGGAAGGTCTGAAGAGATGCTGATTGAGCAAGCTTTGACAATGTATGAGAGTCGAGTTGGTCAGCCATTCGCACTGATGTATTGGTGGAAGGCCGTGTGTGATTCCCCAAAGTGGAATGCTCATGTTACTCTGCTGGGTCATGGAACTACCAAGATTAGGGCTGAGTTTGATGTGAATGCACCACCGGTTGAGCAGCCGGCTCAGGTCAGGCCTATGGGTATCAAGAGGGCCAAGATGGGCAAGCAGACTGACTACTCTGAAGAGGTGAAAGAGCTGATCAAGTCTCTGTGCAAGTCCCATGCAAAGCAAGAAGATGAGACAGCTGAGATGAAGGAGTTCCAGCAGAAGCTGTCTGAGGAGAAGCTTGAGGCAGCCAACGTCCTACTCAAGGCTGCTCAGGAGAAGACAAAGGGCAGGTTGATTGAGCAGCAGACTAAGTTGCTTGAGAGGTTTACACAGATGATTTCTGTGGACACAAGCCGTATGGAGACATGGGCTAGAGAGGCTCATATCAAGGCATGTACACTGATGTCAGACCAGCTGTGGGGCAAGGGGGCTACTGAGGAGTTGTGGGGCAAGGGGGCTACTGAGGAGGCATCAGGAGTTGTCATTTCACCGGGTCATCATTCTCATTGCCATCGTGGTGGAATCTGA
More
|
|||||||
| Protein seq | MDRIFMDPMRSSGYYDFLKDPDLAHPFGEAATQGDFSQPSEDFPYAHGQFPLFSTQPPTTVAVNGGRTAATRSRVRQRVQANPAGQDDGRGRMYYTRDEDLRLVSAWLENSTDVIEGNSRKGDTYWKQVAATYNSTTEEERKRDPKHLKGHWHKNTKKVSAFNGVYVQLRDNYQSGRSEEMLIEQALTMYESRVGQPFALMYWWKAVCDSPKWNAHVTLLGHGTTKIRAEFDVNAPPVEQPAQVRPMGIKRAKMGKQTDYSEEVKELIKSLCKSHAKQEDETAEMKEFQQKLSEEKLEAANVLLKAAQEKTKGRLIEQQTKLLERFTQMISVDTSRMETWAREAHIKACTLMSDQLWGKGATEELWGKGATEEASGVVISPGHHSHCHRGGI
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.0298045 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g36400 | SBH | 4.228297 | 4.003555 | 1.501422 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0015640 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0011160 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0260100 | RBH | 0.0156275 | 0 | 0.01738 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0015170 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0306200 | RBH | 0 | 0 | 0.5092935 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0011080 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0010890 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0011000 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0015430 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0015590 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G011380 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0011190 | SBH | 0.0 | 0.0 | 0.0 |
