Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0257400 | OGI:12051320 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:18018698-18022561 | ||||||||
| Gene Symbol | RLCK371, OsRLCK371 | ||||||||||
| DNA seq | GTTATTGCTTGAAGAACCAAAAACTGTACCTAGTATACGACTTGATGGACAATGGCAGCCTGGAGAAGCACCTCTTCGCCACCGAACGACATCCCTTGCTGAGCTGGTCTCGCCTCTTCAATGTCACATCCTGATTTTTGTTTCAGGATTTATAAATTATTTAATAAATTATTATTAGAATTTATATTAAATGTTCATTAATTTACAAGTGAAGTTAAATGTGGGAAATAAAATTTCCTAAATATAAAGCATGGATAGATTTAATTTTTATTAAATTCTCCATGGTAAATTATACTCTCTGGAATATTCTCGGATTTTTCGGAGCTCAATTATTAATTTTAATCATACAAAGAGCATTTCAGTAATTACCCACATATTAAATTAATCATTAAATGGTCTAATTATAATTTTGTTAAGTACTTTGAGTGTCCAAGTATTTTCAAGATTTTTCTTGGAATTATTTGAGCATAGGAAGTATTTTTAAAAATTCAAAGGTCATTTCAGTGATTAATTTAATTGGAAAAGTATTTAAAATCCCCTTCTCCTTTTCGGGCCGAAATAGGAAAAGTTCAGCTTCAGTCCTCGGCCCATTCTCCCTTCCTTTCGGCTGGCATTATCCCTCCTCCAAAGTCTGCTTTGTGTCCCTCTTTCAATCGGGCCAAGAAGTAGAAGCCCAGCCAAAAGTCTAGTTTGCCTCCCTGCTACAGTGTTGTCTTCAATCTCCAGCCGGCTGGAGACAGAGCCCGAGCCAGCCGCAGTACCTGTATAGCCGCGGTTTTCCCCTCCAAATCCGACCTTTTATCTCGTGTATTTCCAAAATTAGTTGAGGGGAAATACTCCTCTTATCCTCCTCTATCTTTCCCCTCAAAAATCAGAGCAAATGGTTGAGTATATTGCTCGAATCAAACTCGTTTTTGAGTTTATCTCCAAAACCGAGTTTTTGATTTCTCGGATCGATTTCTTGCGGGAGGAGTCCGATCTCTTCAATCCAAGGCTATAAATAGGACCCCCTAGTCCTCCTCTTTCGTTTGCCTCTTTCCCGTGCTCTCTCGTGCTCCGTAGCCTCGTCGCCGCGTCGCGCAAGCCGCCGTCGTCGCCGGTCAACGTGCAGCCGCGCTGCGCCGTCGCCTTAGCCGTCGCCGCTGCCTCCTCTCGCCGCCGGCGGGTGCACGTGACCGAGGGCTAGCCCGGCCGCCCCTTCCCCGTCGTCGCCGGCCACCGGAAGACCGCCACCGCCGTAGTCCGAGCCGCCGCCGCCGCGCCTCTCGTCGCCGGTCGTCGTCGGTCGTCGTTCGGCACTTCGGTGAGCACCATCGGGTTCGTCTCGTCGTCCTCTACGTGTACATGCCCTCCAATTCCGCAGCCGGCCGCTCTATCTCCGGCGAGGTCGTCATCGTGGTTCGGCCGCCATGGGTGATGTCAGCATGACGTCATCGGTTTTTCTTTTTCCCGTTTTTCTAATAGTTTAAATCTTCGGAAAATCATAACTAATTAACCGTAGATCCGTTTCAGGTGGTTCAAGTTGCTAAATTTTTTTAAAATAAAGATCTACATATTAAAATTGTCCATAAATTGAATTAAATTTATTTAATTATTTTTAAATGGGCTTTAATTAGATTTAATCTTGTAAAATTCATAATAAATTCATTTGAAGTCAGAATGAGGCCGTTCAAGTCTCATAATTCATCTAAAATTATGAACTACATGTTTGTTTACTTTTTATGTACTGTTTATTTGGTTTTTATTAGTCTTTTTCTTCGTTTTGCGTGTTAGCTTGTCGTTTCCGTCGTTGCGAAGGTTCGTGAGTGCGTCGGAAGTGATCAAGAAGATTAATTGAAGACCGATTATTGCAAGGCAAGTCACACAGATCCTAAACACAATCCTTTGAGCATGTTGATCCTATATTTAAATTCTCTATTTATTTCGACTGTGCATTTATTTTCGAATGTCACCGGGTGGTGTGAACCTATTCCTTTGTTATGGCCAATTTGCATTGAATGCCCTAATCCTTGATACTTTGGGTAATAAATTGATTAGCTTGAACCTTATGTATTGGTTTGGTTCAGCTAAATGTTATATATATATAATTGCTTAGCAATGCTTAGAAACATTAGCTCACTAATGGGATGAATCATATATACTATATTATTATTTATGGTTATTTTTAATGGTAGCTCACGATGGTTAATCGTGTTATGATAATTAATTGGTAATTAAAATATGATCAATGGTGGGTTGTGAGCACATGGTTTTGAAGGTCGTGCTCATGGCAATTAAGGACCGATTCGCGAGCTACTGTTGTGAAACATTTATCGTGCCAACCACAAGCCAGCATGGGCAACGGCTTTATCTTTTGTATAGCGTGATTCATTATAGTGCGCCAGACTGAGAAGTGGCGAGAAGTCCACGGGGGTCGCTGGGGAGTCCATGCCTTGTTTATAAGGGGGTGATTATGATCCAGGAAAGGTGCGCTGTAATGGATTATGTTGTGCAAGGGGTATTGTCACAACTCCTTTCCGAGGTACCGTGATGGTATTGAGGCACATGGTGACATGATGTGGGGTTGTGTCTTGTGGGTACAGTGGTACACCTCTGGCCAGAGTAAAACTATTCGAATAGCCGTGCCCGCGGTTATGGGCGAGTTGAGCAATGTTTTTCGTGATTAGTCTCACACCTCTCACAATAATGATGGATGCTACTTGGTAAAAATTCGCTTAGCTCCTGGTTTGGAGGTTAGATCTGTACAGCCGGGTATGGTTGTTCAGGATGGTTGGGCCTGTGCAGCATGGGTGTGCTGTTCAGTGTTGATTAAAATTTCTGATTAATTACTTCACTGTTTTACTTCTCTTAAATGTTTTGCTAAATGCTGCTTTTGCAAATGAGTTTGTATTATGCCATCCTTTGGAATCCTTGTGCACTTGCATATTTGCTGTGTGGCTTGTTGAGTATGTCATATGCTCATTCTTGCAATAATCAATCAACCTCAGTTGAAGAAAAAGGATCCAGAAGGTGAAGACGTTTAGCTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCTGAAGCCATCGCTAGACCGTTAATTCCGCTGCTGTTTTCTTTTCTTTTGTAAGTATGTAACGTTATTATTATGATGGATTTGTATATTAAATTGTCAGTTTGTGTACCTCGGCTGATTCCTGGACGAGGATTTTATGCACAAATAAGTTCGGAAATTACTAGTGAATTTCCGGGCGTGACATTCAACATCATCAGAGGCGTCGCCCTCGGCCTGCAGCACCTGCACAGGAACGGCTCCATCCATGGATCCATCAAGGCCAGCAATGTCTTCCTCGAGGAAGGGGACCTCACGCCGCGCCTCGGCGACTTCGGCTGCTCCTGGTTGGAACCATCGTCCACCCGTGATGACCACCACATCAGGGCCGTCTATGGCCTCCCGGAGGTGTTGGGTTGCCCTGTCCCCAACTGTACTAGCAAGGCAACGTTCAGGGCGGATGTCTTCTACTTCGGCGCCCTGATCATCGAGGTGGTTTGTGGAAGGAGGTTCTTCGGCCATGGCGTCCCCGGCGGCTTTAGGTTTCTGGTGGATTGGGTGTGGAGTCTCCATGGGGATGGTCGTATTCTTGAAGCCGTGGATGCCGAACTTCTCCTCGAGGAAGATGGTGGTGATTTGAACCGCACACAAGCGGAGAGGCTCCTTCTCGTTGGGCTTGTGTGCAGCAATGAGGACCGAGACAAGCGGCTGGACATGGATGCCATTGTCGAGATCCTCCAGTCCGATAATGTGCCGCCTCCAGTGGTACCACCAAAAAGGCCGATATTTGCTCCAACGTACCATCATATTCATACAATGACAACCGTCTAA
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| CDS seq | ATGGACAATGGCAGCCTGGAGAAGCACCTCTTCGCCACCGAACGACATCCCTTGCTGAGCTGGTCTCGCCTCTTCAATCACCTGCACAGGAACGGCTCCATCCATGGATCCATCAAGGCCAGCAATGTCTTCCTCGAGGAAGGGGACCTCACGCCGCGCCTCGGCGACTTCGGCTGCTCCTGGTTGGAACCATCGTCCACCCGTGATGACCACCACATCAGGGCCGTCTATGGCCTCCCGGAGGTGTTGGGTTGCCCTGTCCCCAACTGTACTAGCAAGGCAACGTTCAGGGCGGATGTCTTCTACTTCGGCGCCCTGATCATCGAGGTGGTTTGTGGAAGGAGGTTCTTCGGCCATGGCGTCCCCGGCGGCTTTAGGTTTCTGGTGGATTGGGTGTGGAGTCTCCATGGGGATGGTCGTATTCTTGAAGCCGTGGATGCCGAACTTCTCCTCGAGGAAGATGGTGGTGATTTGAACCGCACACAAGCGGAGAGGCTCCTTCTCGTTGGGCTTGTGTGCAGCAATGAGGACCGAGACAAGCGGCTGGACATGGATGCCATTGTCGAGATCCTCCAGTCCGATAATGTGCCGCCTCCAGTGGTACCACCAAAAAGGCCGATATTTGCTCCAACGTACCATCATATTCATACAATGACAACCGTCTAA
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| Protein seq | MDNGSLEKHLFATERHPLLSWSRLFNHLHRNGSIHGSIKASNVFLEEGDLTPRLGDFGCSWLEPSSTRDDHHIRAVYGLPEVLGCPVPNCTSKATFRADVFYFGALIIEVVCGRRFFGHGVPGGFRFLVDWVWSLHGDGRILEAVDAELLLEEDGGDLNRTQAERLLLVGLVCSNEDRDKRLDMDAIVEILQSDNVPPPVVPPKRPIFAPTYHHIHTMTTV |
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| Function | L-type lectin-domain containing receptor kinase VIII.2 [UniProtKB/Swiss-Prot:Q9LYX1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0257400 | OsMH63_12T0257400-mRNA-1 | Chr12 | 18018698 | 18022561 | + | maker | ||
| CDS seq | ATGGACAATGGCAGCCTGGAGAAGCACCTCTTCGCCACCGAACGACATCCCTTGCTGAGCTGGTCTCGCCTCTTCAATCACCTGCACAGGAACGGCTCCATCCATGGATCCATCAAGGCCAGCAATGTCTTCCTCGAGGAAGGGGACCTCACGCCGCGCCTCGGCGACTTCGGCTGCTCCTGGTTGGAACCATCGTCCACCCGTGATGACCACCACATCAGGGCCGTCTATGGCCTCCCGGAGGTGTTGGGTTGCCCTGTCCCCAACTGTACTAGCAAGGCAACGTTCAGGGCGGATGTCTTCTACTTCGGCGCCCTGATCATCGAGGTGGTTTGTGGAAGGAGGTTCTTCGGCCATGGCGTCCCCGGCGGCTTTAGGTTTCTGGTGGATTGGGTGTGGAGTCTCCATGGGGATGGTCGTATTCTTGAAGCCGTGGATGCCGAACTTCTCCTCGAGGAAGATGGTGGTGATTTGAACCGCACACAAGCGGAGAGGCTCCTTCTCGTTGGGCTTGTGTGCAGCAATGAGGACCGAGACAAGCGGCTGGACATGGATGCCATTGTCGAGATCCTCCAGTCCGATAATGTGCCGCCTCCAGTGGTACCACCAAAAAGGCCGATATTTGCTCCAACGTACCATCATATTCATACAATGACAACCGTCTAA
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| Protein seq | MDNGSLEKHLFATERHPLLSWSRLFNHLHRNGSIHGSIKASNVFLEEGDLTPRLGDFGCSWLEPSSTRDDHHIRAVYGLPEVLGCPVPNCTSKATFRADVFYFGALIIEVVCGRRFFGHGVPGGFRFLVDWVWSLHGDGRILEAVDAELLLEEDGGDLNRTQAERLLLVGLVCSNEDRDKRLDMDAIVEILQSDNVPPPVVPPKRPIFAPTYHHIHTMTTV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0500400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g31610 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0500400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0014150 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0014320 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0014210 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0014020 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0013640 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0257500 | RBH | 0.0638845 | 0.0620625 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0013820 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0281700 | SBH | 0.1864105 | 0.070723 | 0.1436315 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0013920 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0014130 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0014090 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0013990 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0014190 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G014020 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0013840 | RBH | 0.0 | 0.0 | 0.0 |
