Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_12G0090900		OGI:12016760 \| 5/16			Minghui 63 \| MH63RS3 \| HZAU			Chr12:5688177-5691466		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		ATGTTGGCCTCTATGACATTTGCTTACACTAGTTCCATGCCTCTCCTAGCCATGCTACTCATCCTCCTCATACAGGTTCAGTCCAGGAGCACGCTTGCCGACGGTACGAGCTCGTCGGCATCGGCACAGCCAGCTCCATGCCTTCCAGGCCAGGCTTGGGCGCTGCTCCGCCTGAAGAACTCATTCGATGCAACAGCCGGCGACTACTCCGCCGCATTCCGGTCATGGATCGCTGGCACGGACTGCTGCCGCTGGGAGGGCATCCGATGCGGCGGCGCCCAAGGCCGTGCCGTCACCTCCCTCGACTTGGGATACCGATGGCTACGATCCCCAGGTCTTGATGATGCACTCTTCAGCCTAACCTCCCTCGAGTACCTTGACATCTCTTGGAACGACTTCAGTGCGTCCAAGCTCCCAGCCACTGGGTTTGAGAAGCTCGCCGAGCTCACCCATCTTGACCTCTGCAGCACCAACTTCGCCGGCCGGGTACCCGTTGGCATCGGCCGCCTCAAGAGCCTGGCCTACCTTGACCTGTCCACCACATTCTTTGAAGATGAGCTGGACGATGAGAACAACGTCATCTATTACTACTCAGACACAATTTCACAGCTCTCGGAACCGAGCTTGGAGACCTTGCTCGCAAACCTCACCAACCTGGAGGAGCTTCGTCTGGGCATGGTGAACATGTCGAGAAACAGCGCACGGTGGTGCGACGCCATGGCCAGGTCCTCCCCAAAGCTGCGGGTCATTAGCATGCCGAACTGCTCACTCTCCGGTCCCATTTGCCACTCACTCTCGGCCTTGCGATCACTTTCAGTGATAGAGCTGCACTACAATCATTTGTCTGGTCCAGTTCCTGAGCTCCTGGCTACTCTCTCCAACCTTACTGTTCTTCAGCTTTCAAATAACATGCTTGAAGGGGTGTTTCCTCCCATCATATTCCAGCTTCAGAAATTAACTAGTATTAGCCTCACTAATAATCTTGGGATCTCCGGAAAACTGCCTAATTTCTCTGCTCACAGTTACTTACAGAGTATATCTGTGAGCAACACCAACTTCTCCGGCACAATTCCAGCTTCCATCAGCAACCTCAAATATCTGAAGGAGTTGGCACTTGGAGCTAGTGGTTTCTCTGGAATGCTGCCATCTTCCATTGGTAAGCTGAAATCTTTACGTATACTAGAGGTGTCTGGGTTAGAGCTACAAGGATCCATGCCGTCATGGATTTCAAATCTGACTTTTTTGAATGTTCTCAAGTTCTTCCATTGTGGTTTGTCCGGACCAATACCTGCTTCTGTCGGATCCTTAACGAAATTGAGAGAATTGGCACTGTACAATTGCCACTTTTCAGGAGAGGTAGCTGCGCTGATATCAAATTTGACTCGCTTGCAAACCCTCCTGCTCCATTCAAACAACTTTATTGGCACAGTGGAGCTAGCCTCATACTCAAAACTGCAAAATCTTTCTGTCCTCAATCTCTCAAATAATAAACTAGTTGTGGTTGATGGAGAAAATAGTTCTTCAGTAGTGTCCTACCCCAGTATTAGCTTCTTACGTCTAGCATCTTGCAGCATATCTAGCTTCCCTAACATCTTGAGGCATCTCCCTTATATTACTAGTCTTGACCTTTCATATAACCAGATCCAAGGTGCAATACCTCAGTGGACATGGGAGACATGGACGATGAACTTTTTCTTGTTGAACCTATCACATAATAACTTTACGAGTATTGGATCCAATCCTTTACTTCCCCTTTACATTGAATACTTTGATCTCAGTTTCAACAATTTTGATGGAGCAATACCAGTACCACAAAAAGGAAGTATCACACTTGATTACTCAACCAACCGGTTCTCATCTATGCCTCTTAATTTCTCCAGTTACCTTAAGAATACAGTCGTTCTCAAAGCCTCCGACAATAGCCTCTCTGGAAACATTCCCTCATCGATTTGTGATGCAATTAAGAGTTTACAACTACTTGATCTCTCTAATAACAACTTGACAGGCTCAATGCCATCATGTCTGACGCAAGATGCAAGTGCATTGCAGGTATTAAGTCTAAAACAAAACCATCTTACTGGCGAGTTACCTGATAATATCAAGGAAGGTTGTGCATTAAGTGCATTAGACTTCAGCGGCAATATGATTCAAGGACAGCTACCAAGATCTTTGGTTGCCTGTAGGAATCTGGAGATCCTTGACATCGGCAACAATCAAATTAGTGACCACTTCCCATGTTGGATGAGTAAACTTCCTGAACTTCAAGTCCTGGTCCTCAAGTCTAACAAGTTCCATGGGAAAATAATGGATCCTTTGTATACCAGAGATGGAAACAACTGTCAATTTTCCATGTTGCGGATTGCTGACATAGCCTCAAACAACTTCAGTGGCACATTGCCAGAAGAGTTGTTTAAGATGCTCAAGTCCATGATGACCAGGTCAGATAACGAGACTTTAGTCATGGAACATCAGTATTCCCACGGCCAGACATACCAGTTTACTGCTGCACTCACATACAAAGGCAATGACATAACAATTTCCAAGATCTTGAGATCACTTGTGCTCATTGATGTCTCAAATAATGAATTCGATGGTAGCATCCCTTCAAGCATTGGGGAACTTGCGTTGCTTCATGGACTCAACATGTCTCATAACATGCTTACAGGGCCAATTCCAACTCAGTTTGACAATTTGAACAACCTTGAGTCGTTGGACCTCTCCTCAAATAAGCTTTCTGGTGAGATTCCACAAGAGCTAGCATCGTTGAACTTCCTTGCAACATTGAATTTGTCCTATAATATGTTGGCTGGAAGAATACCACAATCGTCACACTTCTCGACATTTTCCAATGCCTCTTTTGAGGGAAATATTGGGCTCTGCGGACCCCCATTGTCTAAACAATGTAGCTACCGATCTGAACCAAACATCATGCCACATGCTTCCAAGAAGGATCCCATAGATGTTCTACTTTTTCTCTTCACTGGGTTGGGATTTGGTGTCTGCTTTGGAATTACAATTTTAGTGATATGGGGAAGCAACAACAGGAAGCAGCAAGCCTGAGAGGGAACCATGTTATAGAATGGCAGAATATTTTGTCAGTCACTCTTGATCACTCTAGCAACAGTCAGAAAGAGTAGTATGAATAGTGATGTATGAATTAAATAAAGGATGATTATGTTACCATGGAAGGATAATACTATGGACAATGTAATTAAGCAACAAAGCAGGCAATATTGTATCCATGAAAAGATATGTTTACATTTGAGAGCTATCTAATACTGTTGCCTATC More
CDS seq		ATGTTGGCCTCTATGACATTTGCTTACACTAGTTCCATGCCTCTCCTAGCCATGCTACTCATCCTCCTCATACAGGTTCAGTCCAGGAGCACGCTTGCCGACGGTACGAGCTCGTCGGCATCGGCACAGCCAGCTCCATGCCTTCCAGGCCAGGCTTGGGCGCTGCTCCGCCTGAAGAACTCATTCGATGCAACAGCCGGCGACTACTCCGCCGCATTCCGGTCATGGATCGCTGGCACGGACTGCTGCCGCTGGGAGGGCATCCGATGCGGCGGCGCCCAAGGCCGTGCCGTCACCTCCCTCGACTTGGGATACCGATGGCTACGATCCCCAGGTCTTGATGATGCACTCTTCAGCCTAACCTCCCTCGAGTACCTTGACATCTCTTGGAACGACTTCAGTGCGTCCAAGCTCCCAGCCACTGGGTTTGAGAAGCTCGCCGAGCTCACCCATCTTGACCTCTGCAGCACCAACTTCGCCGGCCGGGTACCCGTTGGCATCGGCCGCCTCAAGAGCCTGGCCTACCTTGACCTGTCCACCACATTCTTTGAAGATGAGCTGGACGATGAGAACAACGTCATCTATTACTACTCAGACACAATTTCACAGCTCTCGGAACCGAGCTTGGAGACCTTGCTCGCAAACCTCACCAACCTGGAGGAGCTTCGTCTGGGCATGGTGAACATGTCGAGAAACAGCGCACGGTGGTGCGACGCCATGGCCAGGTCCTCCCCAAAGCTGCGGGTCATTAGCATGCCGAACTGCTCACTCTCCGGTCCCATTTGCCACTCACTCTCGGCCTTGCGATCACTTTCAGTGATAGAGCTGCACTACAATCATTTGTCTGGTCCAGTTCCTGAGCTCCTGGCTACTCTCTCCAACCTTACTGTTCTTCAGCTTTCAAATAACATGCTTGAAGGGGTGTTTCCTCCCATCATATTCCAGCTTCAGAAATTAACTAGTATTAGCCTCACTAATAATCTTGGGATCTCCGGAAAACTGCCTAATTTCTCTGCTCACAGTTACTTACAGAGTATATCTGTGAGCAACACCAACTTCTCCGGCACAATTCCAGCTTCCATCAGCAACCTCAAATATCTGAAGGAGTTGGCACTTGGAGCTAGTGGTTTCTCTGGAATGCTGCCATCTTCCATTGGTAAGCTGAAATCTTTACGTATACTAGAGGTGTCTGGGTTAGAGCTACAAGGATCCATGCCGTCATGGATTTCAAATCTGACTTTTTTGAATGTTCTCAAGTTCTTCCATTGTGGTTTGTCCGGACCAATACCTGCTTCTGTCGGATCCTTAACGAAATTGAGAGAATTGGCACTGTACAATTGCCACTTTTCAGGAGAGGTAGCTGCGCTGATATCAAATTTGACTCGCTTGCAAACCCTCCTGCTCCATTCAAACAACTTTATTGGCACAGTGGAGCTAGCCTCATACTCAAAACTGCAAAATCTTTCTGTCCTCAATCTCTCAAATAATAAACTAGTTGTGGTTGATGGAGAAAATAGTTCTTCAGTAGTGTCCTACCCCAGTATTAGCTTCTTACGTCTAGCATCTTGCAGCATATCTAGCTTCCCTAACATCTTGAGGCATCTCCCTTATATTACTAGTCTTGACCTTTCATATAACCAGATCCAAGGTGCAATACCTCAGTGGACATGGGAGACATGGACGATGAACTTTTTCTTGTTGAACCTATCACATAATAACTTTACGAGTATTGGATCCAATCCTTTACTTCCCCTTTACATTGAATACTTTGATCTCAGTTTCAACAATTTTGATGGAGCAATACCAGTACCACAAAAAGGAAGTATCACACTTGATTACTCAACCAACCGGTTCTCATCTATGCCTCTTAATTTCTCCAGTTACCTTAAGAATACAGTCGTTCTCAAAGCCTCCGACAATAGCCTCTCTGGAAACATTCCCTCATCGATTTGTGATGCAATTAAGAGTTTACAACTACTTGATCTCTCTAATAACAACTTGACAGGCTCAATGCCATCATGTCTGACGCAAGATGCAAGTGCATTGCAGGTATTAAGTCTAAAACAAAACCATCTTACTGGCGAGTTACCTGATAATATCAAGGAAGGTTGTGCATTAAGTGCATTAGACTTCAGCGGCAATATGATTCAAGGACAGCTACCAAGATCTTTGGTTGCCTGTAGGAATCTGGAGATCCTTGACATCGGCAACAATCAAATTAGTGACCACTTCCCATGTTGGATGAGTAAACTTCCTGAACTTCAAGTCCTGGTCCTCAAGTCTAACAAGTTCCATGGGAAAATAATGGATCCTTTGTATACCAGAGATGGAAACAACTGTCAATTTTCCATGTTGCGGATTGCTGACATAGCCTCAAACAACTTCAGTGGCACATTGCCAGAAGAGTTGTTTAAGATGCTCAAGTCCATGATGACCAGGTCAGATAACGAGACTTTAGTCATGGAACATCAGTATTCCCACGGCCAGACATACCAGTTTACTGCTGCACTCACATACAAAGGCAATGACATAACAATTTCCAAGATCTTGAGATCACTTGTGCTCATTGATGTCTCAAATAATGAATTCGATGGTAGCATCCCTTCAAGCATTGGGGAACTTGCGTTGCTTCATGGACTCAACATGTCTCATAACATGCTTACAGGGCCAATTCCAACTCAGTTTGACAATTTGAACAACCTTGAGTCGTTGGACCTCTCCTCAAATAAGCTTTCTGGTGAGATTCCACAAGAGCTAGCATCGTTGAACTTCCTTGCAACATTGAATTTGTCCTATAATATGTTGGCTGGAAGAATACCACAATCGTCACACTTCTCGACATTTTCCAATGCCTCTTTTGAGGGAAATATTGGGCTCTGCGGACCCCCATTGTCTAAACAATGTAGCTACCGATCTGAACCAAACATCATGCCACATGCTTCCAAGAAGGATCCCATAGATGTTCTACTTTTTCTCTTCACTGGGTTGGGATTTGGTGTCTGCTTTGGAATTACAATTTTAGTGATATGGGGAAGCAACAACAGGAAGCAGCAAGCCTGA More
Protein seq		MLASMTFAYTSSMPLLAMLLILLIQVQSRSTLADGTSSSASAQPAPCLPGQAWALLRLKNSFDATAGDYSAAFRSWIAGTDCCRWEGIRCGGAQGRAVTSLDLGYRWLRSPGLDDALFSLTSLEYLDISWNDFSASKLPATGFEKLAELTHLDLCSTNFAGRVPVGIGRLKSLAYLDLSTTFFEDELDDENNVIYYYSDTISQLSEPSLETLLANLTNLEELRLGMVNMSRNSARWCDAMARSSPKLRVISMPNCSLSGPICHSLSALRSLSVIELHYNHLSGPVPELLATLSNLTVLQLSNNMLEGVFPPIIFQLQKLTSISLTNNLGISGKLPNFSAHSYLQSISVSNTNFSGTIPASISNLKYLKELALGASGFSGMLPSSIGKLKSLRILEVSGLELQGSMPSWISNLTFLNVLKFFHCGLSGPIPASVGSLTKLRELALYNCHFSGEVAALISNLTRLQTLLLHSNNFIGTVELASYSKLQNLSVLNLSNNKLVVVDGENSSSVVSYPSISFLRLASCSISSFPNILRHLPYITSLDLSYNQIQGAIPQWTWETWTMNFFLLNLSHNNFTSIGSNPLLPLYIEYFDLSFNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYLKNTVVLKASDNSLSGNIPSSICDAIKSLQLLDLSNNNLTGSMPSCLTQDASALQVLSLKQNHLTGELPDNIKEGCALSALDFSGNMIQGQLPRSLVACRNLEILDIGNNQISDHFPCWMSKLPELQVLVLKSNKFHGKIMDPLYTRDGNNCQFSMLRIADIASNNFSGTLPEELFKMLKSMMTRSDNETLVMEHQYSHGQTYQFTAALTYKGNDITISKILRSLVLIDVSNNEFDGSIPSSIGELALLHGLNMSHNMLTGPIPTQFDNLNNLESLDLSSNKLSGEIPQELASLNFLATLNLSYNMLAGRIPQSSHFSTFSNASFEGNIGLCGPPLSKQCSYRSEPNIMPHASKKDPIDVLLFLFTGLGFGVCFGITILVIWGSNNRKQQA
Function		Receptor-like protein 6 [UniProtKB/Swiss-Prot:Q9C637]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_12G0090900	OsMH63_12T0090900.1	Chr12	5688177	5691466	+	maker
CDS seq	ATGTTGGCCTCTATGACATTTGCTTACACTAGTTCCATGCCTCTCCTAGCCATGCTACTCATCCTCCTCATACAGGTTCAGTCCAGGAGCACGCTTGCCGACGGTACGAGCTCGTCGGCATCGGCACAGCCAGCTCCATGCCTTCCAGGCCAGGCTTGGGCGCTGCTCCGCCTGAAGAACTCATTCGATGCAACAGCCGGCGACTACTCCGCCGCATTCCGGTCATGGATCGCTGGCACGGACTGCTGCCGCTGGGAGGGCATCCGATGCGGCGGCGCCCAAGGCCGTGCCGTCACCTCCCTCGACTTGGGATACCGATGGCTACGATCCCCAGGTCTTGATGATGCACTCTTCAGCCTAACCTCCCTCGAGTACCTTGACATCTCTTGGAACGACTTCAGTGCGTCCAAGCTCCCAGCCACTGGGTTTGAGAAGCTCGCCGAGCTCACCCATCTTGACCTCTGCAGCACCAACTTCGCCGGCCGGGTACCCGTTGGCATCGGCCGCCTCAAGAGCCTGGCCTACCTTGACCTGTCCACCACATTCTTTGAAGATGAGCTGGACGATGAGAACAACGTCATCTATTACTACTCAGACACAATTTCACAGCTCTCGGAACCGAGCTTGGAGACCTTGCTCGCAAACCTCACCAACCTGGAGGAGCTTCGTCTGGGCATGGTGAACATGTCGAGAAACAGCGCACGGTGGTGCGACGCCATGGCCAGGTCCTCCCCAAAGCTGCGGGTCATTAGCATGCCGAACTGCTCACTCTCCGGTCCCATTTGCCACTCACTCTCGGCCTTGCGATCACTTTCAGTGATAGAGCTGCACTACAATCATTTGTCTGGTCCAGTTCCTGAGCTCCTGGCTACTCTCTCCAACCTTACTGTTCTTCAGCTTTCAAATAACATGCTTGAAGGGGTGTTTCCTCCCATCATATTCCAGCTTCAGAAATTAACTAGTATTAGCCTCACTAATAATCTTGGGATCTCCGGAAAACTGCCTAATTTCTCTGCTCACAGTTACTTACAGAGTATATCTGTGAGCAACACCAACTTCTCCGGCACAATTCCAGCTTCCATCAGCAACCTCAAATATCTGAAGGAGTTGGCACTTGGAGCTAGTGGTTTCTCTGGAATGCTGCCATCTTCCATTGGTAAGCTGAAATCTTTACGTATACTAGAGGTGTCTGGGTTAGAGCTACAAGGATCCATGCCGTCATGGATTTCAAATCTGACTTTTTTGAATGTTCTCAAGTTCTTCCATTGTGGTTTGTCCGGACCAATACCTGCTTCTGTCGGATCCTTAACGAAATTGAGAGAATTGGCACTGTACAATTGCCACTTTTCAGGAGAGGTAGCTGCGCTGATATCAAATTTGACTCGCTTGCAAACCCTCCTGCTCCATTCAAACAACTTTATTGGCACAGTGGAGCTAGCCTCATACTCAAAACTGCAAAATCTTTCTGTCCTCAATCTCTCAAATAATAAACTAGTTGTGGTTGATGGAGAAAATAGTTCTTCAGTAGTGTCCTACCCCAGTATTAGCTTCTTACGTCTAGCATCTTGCAGCATATCTAGCTTCCCTAACATCTTGAGGCATCTCCCTTATATTACTAGTCTTGACCTTTCATATAACCAGATCCAAGGTGCAATACCTCAGTGGACATGGGAGACATGGACGATGAACTTTTTCTTGTTGAACCTATCACATAATAACTTTACGAGTATTGGATCCAATCCTTTACTTCCCCTTTACATTGAATACTTTGATCTCAGTTTCAACAATTTTGATGGAGCAATACCAGTACCACAAAAAGGAAGTATCACACTTGATTACTCAACCAACCGGTTCTCATCTATGCCTCTTAATTTCTCCAGTTACCTTAAGAATACAGTCGTTCTCAAAGCCTCCGACAATAGCCTCTCTGGAAACATTCCCTCATCGATTTGTGATGCAATTAAGAGTTTACAACTACTTGATCTCTCTAATAACAACTTGACAGGCTCAATGCCATCATGTCTGACGCAAGATGCAAGTGCATTGCAGGTATTAAGTCTAAAACAAAACCATCTTACTGGCGAGTTACCTGATAATATCAAGGAAGGTTGTGCATTAAGTGCATTAGACTTCAGCGGCAATATGATTCAAGGACAGCTACCAAGATCTTTGGTTGCCTGTAGGAATCTGGAGATCCTTGACATCGGCAACAATCAAATTAGTGACCACTTCCCATGTTGGATGAGTAAACTTCCTGAACTTCAAGTCCTGGTCCTCAAGTCTAACAAGTTCCATGGGAAAATAATGGATCCTTTGTATACCAGAGATGGAAACAACTGTCAATTTTCCATGTTGCGGATTGCTGACATAGCCTCAAACAACTTCAGTGGCACATTGCCAGAAGAGTTGTTTAAGATGCTCAAGTCCATGATGACCAGGTCAGATAACGAGACTTTAGTCATGGAACATCAGTATTCCCACGGCCAGACATACCAGTTTACTGCTGCACTCACATACAAAGGCAATGACATAACAATTTCCAAGATCTTGAGATCACTTGTGCTCATTGATGTCTCAAATAATGAATTCGATGGTAGCATCCCTTCAAGCATTGGGGAACTTGCGTTGCTTCATGGACTCAACATGTCTCATAACATGCTTACAGGGCCAATTCCAACTCAGTTTGACAATTTGAACAACCTTGAGTCGTTGGACCTCTCCTCAAATAAGCTTTCTGGTGAGATTCCACAAGAGCTAGCATCGTTGAACTTCCTTGCAACATTGAATTTGTCCTATAATATGTTGGCTGGAAGAATACCACAATCGTCACACTTCTCGACATTTTCCAATGCCTCTTTTGAGGGAAATATTGGGCTCTGCGGACCCCCATTGTCTAAACAATGTAGCTACCGATCTGAACCAAACATCATGCCACATGCTTCCAAGAAGGATCCCATAGATGTTCTACTTTTTCTCTTCACTGGGTTGGGATTTGGTGTCTGCTTTGGAATTACAATTTTAGTGATATGGGGAAGCAACAACAGGAAGCAGCAAGCCTGA More
Protein seq	MLASMTFAYTSSMPLLAMLLILLIQVQSRSTLADGTSSSASAQPAPCLPGQAWALLRLKNSFDATAGDYSAAFRSWIAGTDCCRWEGIRCGGAQGRAVTSLDLGYRWLRSPGLDDALFSLTSLEYLDISWNDFSASKLPATGFEKLAELTHLDLCSTNFAGRVPVGIGRLKSLAYLDLSTTFFEDELDDENNVIYYYSDTISQLSEPSLETLLANLTNLEELRLGMVNMSRNSARWCDAMARSSPKLRVISMPNCSLSGPICHSLSALRSLSVIELHYNHLSGPVPELLATLSNLTVLQLSNNMLEGVFPPIIFQLQKLTSISLTNNLGISGKLPNFSAHSYLQSISVSNTNFSGTIPASISNLKYLKELALGASGFSGMLPSSIGKLKSLRILEVSGLELQGSMPSWISNLTFLNVLKFFHCGLSGPIPASVGSLTKLRELALYNCHFSGEVAALISNLTRLQTLLLHSNNFIGTVELASYSKLQNLSVLNLSNNKLVVVDGENSSSVVSYPSISFLRLASCSISSFPNILRHLPYITSLDLSYNQIQGAIPQWTWETWTMNFFLLNLSHNNFTSIGSNPLLPLYIEYFDLSFNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYLKNTVVLKASDNSLSGNIPSSICDAIKSLQLLDLSNNNLTGSMPSCLTQDASALQVLSLKQNHLTGELPDNIKEGCALSALDFSGNMIQGQLPRSLVACRNLEILDIGNNQISDHFPCWMSKLPELQVLVLKSNKFHGKIMDPLYTRDGNNCQFSMLRIADIASNNFSGTLPEELFKMLKSMMTRSDNETLVMEHQYSHGQTYQFTAALTYKGNDITISKILRSLVLIDVSNNEFDGSIPSSIGELALLHGLNMSHNMLTGPIPTQFDNLNNLESLDLSSNKLSGEIPQELASLNFLATLNLSYNMLAGRIPQSSHFSTFSNASFEGNIGLCGPPLSKQCSYRSEPNIMPHASKKDPIDVLLFLFTGLGFGVCFGITILVIWGSNNRKQQA More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.008493	0.0515135	0

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_12g0222800	RBH	0.758600	0.940451	0.444868
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os12g11720	RBH	0.053955	0.041274	0.012549
Nipponbare \| IRGSP 1.0 \| RAP-db	Os12g0222800	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_12g0007040	SBH	0.175668	1.262008	0.119848
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_12g0007130	SBH	0.041188	0.0	0.300094
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_12g0007170	SBH	1.891639	0.527976	1.866642
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_12g0007140	RBH	0.0	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_12g0006970	SBH	0.802722	1.696579	2.660084
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_12G0090500	RBH	0.121109	1.426467	0.1953725
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_12g0006940	SBH	0.031692	0.052190	0.040368
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_12G0096800	RBH	0.023247	0.28572	0.018729
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_12g0006810	SBH	0.081226	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_12g0007110	SBH	0.163408	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_12g0006960	SBH	0.0	6.204627	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_12g0007010	SBH	0.120750	0.0	0.221219
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_12g0006920	RBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_12G006920	SBH	0.100535	0.0	0.454696
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_12g0006940	SBH	0.152372	0.0	0.377484

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.