Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_12g0007170 | OGI:12016510 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr12:6046144-6053067 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gtgtttattcatgtgtgccatagagttgaaacaaacccaaccttccgacatgttgtccaactccaagagagtttcttaccatctgatgcatctcctggccatgctacccatcctcctacatgttcagtccatggcggcgccagttccatgccttccagaccaggcatcggcgctgctccagctgaaacgctccttcaacaccacggtcggtgactactccgcggccttccgatcatgggtcgccggcacagactgctgccactggaatggcgtccgctgtggcggatccgatggccatatcacctccctcgacctgagtcaccgtgatttgcaagcctcaggtcttgatgatgcactcttcagtctaacctccctcgagtaccttgacatctcttggaacgacttcagtgcgtccaagctcccagccattgggtttgagaagctcgccgagctcacccatcttgacctctgcaccaccaacttcgccggccgggtacccgttggcatcggccgcctcaagagcctggcctaccttgacctgtctacaacattctttctatatgagcaggacgaggagaacagcatcacctattactactcagaaacaatgtcacagctctcggaaccgagcttggagaccttgctcgcaaacctcaccaacctggaggagcttcgcctgggcatggtgaacatgtcaagcaacggcgcacggtggtgcgacgccatagccaggtcctccccaaagctgcgggtcattagcatgccgtactgctcactctccggtcccatttgccactcactctcggccttgcgatcactttcagtgatagagctgcactacaatcatttgtctggtccagttcctgagctcctggctactctctccaaccttactgttcttcagctttcaaataacatgcttgaaggggtgtttcctcccatcatattccagcttcagaaattaactagtattagcctcactaataatcttgggatctccggaaaactgcctaatttctctgctcacagttacttacagagtatatctgtgagcaacaccaacttctccggcacaattccagcttccatcagcaacctcaaatatctgaaggagttggcacttggagctagtggtttctctggaatgctgccatcttccattggtaagctgaaatctttacatatactagaggtgtctgggttagagctacaaggatccatgccgtcatggatttcaaatctgacttttttgaatgttctcaagttcttccattgtggtttgtccggaccaatacctgcttctgtcggatccttaacgaaattgagagaattggcactgtacaattgccacttttcaggagaggtagctgcgctgatatcaaatttgactcgcttgcaaaccctcctgctccattcaaacaactttattggcacagtggagctagcctcatactcaaaactgcaaaatctttctgtcctcaatctctcaaataataaactagttgtggttgatggagaaaatagttcttcagtagtgtcctaccccagtattagcttcttacgtctagcatcttgcagcatatctagcttccctaacatcttgaggcatctcccttatattactagtcttgacctttcatataaccagatccaaggtgcaatacctcagtggacatgggagacatggacgatgaactttttcttgttgaacctatcacataataactttacgagtattggatccaatcctttacttcccctttacattgaatactttgatctcagtttcaacaattttgatggagcaataccagtaccacaaaaaggaagtatcacacttgattactcaaccaaccggttctcatctatgcctcttaatttctccagttaccttaagaatacagtcgttctcaaagcctccgacaatagcctctctggaaacattccctcatcgatttgtgatgcaattaagagtttacaactacttgatctctctaataacaacttgacaggctcaatgccatcatgtctgacgcaagatgcaagtgcattgcaggtattaagtctaaaacaaaaccatcttactggcgagttacctgataatatcaaggaaggttgtgcattaagtgcattagacttcagcggcaatatgattcaaggacagctaccaagatctttggttgcctgtaggaatctggagatccttgacatcggcaacaatcaaattagtgaccacttcccatgttggatgagtaaacttcctgaacttcaagtcctggtcctcaagtctaacaagttccatgggaaaataatggatcctttgtataccagagatggaaacaactgtcaattttccatgttgcggattgctgacatagcctcaaacaacttcagtggcacattgccagaagagttgtttaagatgctcaagtccatgatgaccaggtcagataacgagactttagtcatggaacatcagtattcccacggccagacataccagtttactgctgcactcacatacaaaggcaatgacataacaatttccaagatcttgagatcacttgtgctcattgatgtctcaaataatgaattcgatggtagcatcccttcaagcattggggaacttgcgttgcttcatggactcaacatgtctcataacatgcttacagggccaattccaactcagtttgacaatttgaacaaccttgagtcgttggacctctcctcaaataagctttctggtgagattccacaagagctagcatcgttgaacttccttgcaacattgaatttgtcctataatatgttggctggaagaataccacaatcgtcacacttctcgacattttccaatgcctcttttgagggaaatattgggctctgcggacccccattgtctaaacaatgtagctaccgatctgaaccaaacatcatgccacatgcttccaagaaggatcccatagatgttctactttttctcttcactgggttgggatttggtgtctgctttggaattacaattttagtgatatggggaagcaacaacaggaagcagcaagcctgagagggaaccatgttatagaatggcagaatattttgtcagtcactcttgatcactctagcaacagtcagaaagagtagtatgaatagtgatgtatgaattaaataaaggatgattatgttaccatggaaggataatactatggacaatgtaattaagcaacaaagcaggcaatattgtatccatgaaaagatatgtttacatttgagagctatctaatactgttgcctatcaacttgtctttcagatatttttacaaggaatctagtgtttttcaacttgttgcagatcaaggcgtgcaagtgaacttaatttgtttccttgtttgcatagtttttcacctatggatttattaaaaagagataattgcttatttgacgctcttttgtgttggaaatatagtcattaattggcatgttttaatccaaaaagttaaagcaataatcatggacaatcaaaacaaagacttttctaaactggacagtgggagtacatgtataagtgcaagtagatgtacctgtattttgtgtgccatagatcagtacgtagaaaacaaacccaacccagccgtacgttcttcaacatgcgatctgcttaccatctgatgcctctgctagccatgctactcatcctcgtccttgctgaccatacaagctccacggaagcagtagcaccggctgcgtgcctcccagaccaggcagcggcgctgctccagctgaaacgctccttcaacgccaccatcggtgactactctgccgccttccggtcatgggttgccgttgccggcgcagactgttgcagctgggacggcgtccggtgcggcggcgccggcggccgtgtcacctcgctcgacctgagccaccgtgatttgcaagccgcctcaggtcttgacgacgcactcttcagcctaacctcgctggaataccttgacctctcttccaacgacttcggcaagtcccagatgccagccacagggttcgagaagctcaccgggctcacccatcttgacctctccaacacaaacttcgccggcctggtacctgccggcatcggccgcctcaccagactctcctaccttgacctgtcgacaacattttttgtagaggagttggacgacgagtacagcatcacgtactactactcggacacaatggcacagctctcggagtcgagcttggagaccttgctcgcaaacctcaccaacctggaggagcttcgcctgggcatggtggtggtgaagaacatgtcgagcaacggcactgcacggtggtgcgacgccatggccaggtcctccccgaagctgagggtcattagcatgccgtactgctcactctccggtcccatttgccactcactctcagccttgcgatcacttgcagtgatagagctgcactacaatcatttatctggtccagttcctgggttcttggctactctctccaacctaagtgtccttcagctttcaaacaacaagtttgagggatggttccctcccatcatcttccagcacgagaaattaacaactattaacctcaccaaaaatcttggaatctccggaaatttgcctaatttctcaggtgagagtgtcttacagagtatatctgtcagcaacaccaacttctccggcacaattccaagttctatcagcaacctcaaatctctgaagaagttggctcttggagctagtggtttctctggagtgctgccatcctccatcggtaagatgaaatccttatctttactagaggtgtctgggttagatctagtaggatccataccatcatggatctcaaacctgacttctcttaatgttctcaagttcttcacttgtggattgtctggacccataccatcgtccatagggtacttaacaaaattgacaaaattggcactgtacaattgccagttttcaggcgagataccttcactgatcttaaatttgactaaattggaaaccctcctgctccattcaaacagttttgtcgggatagtggaactaacctcatactcaaaactgcaaaacctgtatgtcctgaatctttcaaacaataaactaattgtgatagatggagaaaataattcttctctagtgtcatatcccagtattagcttcttacgtctcgcatcttgtagcatatctagctttcctaacatcttgaggcatctccctgagattactagtctcgacctttcatataaccaactgcaaggtgcaatacctcagtggacatgggagacctggacgatggacttttccttgctgaacctatcacataataaccttaggagcattggacctgatcctttgcttaatctttacattgagttcttagatctcagtttcaacaattttgaaggcaccatacctataccagaacaaggaagtgtcacacttgattactcaaacaaccgattctcatctatgcctatgcctcttaatttctctacttaccttatgaatacagtaattttcaaggtctccagaaatagcctctctggatacattccaccaacgatttgtgatgcaattaagagtttacaaattattgatctctcttataacaacttgactggatcaataccatcatgtctgatggaggatgtaggtgcactacaagtcttaaatctaaaaggaaataagcttgatggcgagttgcctgataatatcaaagaaggttgtgcattaagtgcattggattttagcgacaatctgattcaaggacagctacccagatctctagttgcttgcaggaatctggagatccttgacattggaaacaatcagattagtgattccttcccttgttggatgagtaaacttcctgtgcttcgagtcctggtcctccagtctaacaagttcattgggcaggtactggatccttcatatactagatacgggaataactgtcaatttacaagtttgcggattgccgacatagcctcaaacaacttcagtggcacgttgccagaagagtggtttaagatgcttaggtctatgatgtccagctctgataatggaacttcagtcatggaacatctctatccccgggagaggtacaagtttactgttgcagtcacatacaaaggcagtcacatgacattttccaagattttaacgtcacttgtactcatcgatgtctcaaacaataaattccatggtaacatccctgccggcattgaagaacttgtgttacttcatgggctcaacatgtctcataacgtccttacaggaccaattcccactcaatttggcaaattagacaaccttgagacattagacctctcctcgaataagctttctggtgagatcccgcaggagctggcatcattgaacttcctttcaatattgaatttgtcttataatatgttggatggaaaaataccacaatcattacacttctccacattttccaatgactcttttgtggggaatattgggttgtgtggacctccgttgtctaaacaatgcggttatccaactgaaccaaacatgatgtcacacactgctgagaagaattccatagatgttctactctttctcttcacagcattggggtttggtatctgtttcggaattacaattctagtgatatggggaggccacaacaggaaacaaccttgtgagagagcaattttatacattggcagaatagtttggtagtgactcttggtcaacccagcaacatttagtaaactaatattaataatgaggcatgtatgagctaaataaagaagtgatatgttatcactgatatgtggttgttctaatttaagcaacaaagcagacagcattgtatgcatgaaaaagataattatgtctgagagctatgtagttctcaattgcagcatatttcacggcc
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| CDS seq | atgtgtgccatagagttgaaacaaacccaaccttccgacatgttgtccaactccaagagagtttcttaccatctgatgcatctcctggccatgctacccatcctcctacatgttcagtccatggcggcgccagttccatgccttccagaccaggcatcggcgctgctccagctgaaacgctccttcaacaccacggtcggtgactactccgcggccttccgatcatgggtcgccggcacagactgctgccactggaatggcgtccgctgtggcggatccgatggccatatcacctccctcgacctgagtcaccgtgatttgcaagcctcaggtcttgatgatgcactcttcagtctaacctccctcgagtaccttgacatctcttggaacgacttcagtgcgtccaagctcccagccattgggtttgagaagctcgccgagctcacccatcttgacctctgcaccaccaacttcgccggccgggtacccgttggcatcggccgcctcaagagcctggcctaccttgacctgtctacaacattctttctatatgagcaggacgaggagaacagcatcacctattactactcagaaacaatgtcacagctctcggaaccgagcttggagaccttgctcgcaaacctcaccaacctggaggagcttcgcctgggcatggtgaacatgtcaagcaacggcgcacggtggtgcgacgccatagccaggtcctccccaaagctgcgggtcattagcatgccgtactgctcactctccggtcccatttgccactcactctcggccttgcgatcactttcagtgatagagctgcactacaatcatttgtctggtccagttcctgagctcctggctactctctccaaccttactgttcttcagctttcaaataacatgcttgaaggggtgtttcctcccatcatattccagcttcagaaattaactagtattagcctcactaataatcttgggatctccggaaaactgcctaatttctctgctcacagttacttacagagtatatctgtgagcaacaccaacttctccggcacaattccagcttccatcagcaacctcaaatatctgaaggagttggcacttggagctagtggtttctctggaatgctgccatcttccattggtaagctgaaatctttacatatactagaggtgtctgggttagagctacaaggatccatgccgtcatggatttcaaatctgacttttttgaatgttctcaagttcttccattgtggtttgtccggaccaatacctgcttctgtcggatccttaacgaaattgagagaattggcactgtacaattgccacttttcaggagaggtagctgcgctgatatcaaatttgactcgcttgcaaaccctcctgctccattcaaacaactttattggcacagtggagctagcctcatactcaaaactgcaaaatctttctgtcctcaatctctcaaataataaactagttgtggttgatggagaaaatagttcttcagtagtgtcctaccccagtattagcttcttacgtctagcatcttgcagcatatctagcttccctaacatcttgaggcatctcccttatattactagtcttgacctttcatataaccagatccaaggtgcaatacctcagtggacatgggagacatggacgatgaactttttcttgttgaacctatcacataataactttacgagtattggatccaatcctttacttcccctttacattgaatactttgatctcagtttcaacaattttgatggagcaataccagtaccacaaaaaggaagtatcacacttgattactcaaccaaccggttctcatctatgcctcttaatttctccagttaccttaagaatacagtcgttctcaaagcctccgacaatagcctctctggaaacattccctcatcgatttgtgatgcaattaagagtttacaactacttgatctctctaataacaacttgacaggctcaatgccatcatgtctgacgcaagatgcaagtgcattgcaggtattaagtctaaaacaaaaccatcttactggcgagttacctgataatatcaaggaaggttgtgcattaagtgcattagacttcagcggcaatatgattcaaggacagctaccaagatctttggttgcctgtaggaatctggagatccttgacatcggcaacaatcaaattagtgaccacttcccatgttggatgagtaaacttcctgaacttcaagtcctggtcctcaagtctaacaagttccatgggaaaataatggatcctttgtataccagagatggaaacaactgtcaattttccatgttgcggattgctgacatagcctcaaacaacttcagtggcacattgccagaagagttgtttaagatgctcaagtccatgatgaccaggtcagataacgagactttagtcatggaacatcagtattcccacggccagacataccagtttactgctgcactcacatacaaaggcaatgacataacaatttccaagatcttgagatcacttgtgctcattgatgtctcaaataatgaattcgatggtagcatcccttcaagcattggggaacttgcgttgcttcatggactcaacatgtctcataacatgcttacagggccaattccaactcagtttgacaatttgaacaaccttgagtcgttggacctctcctcaaataagctttctggtgagattccacaagagctagcatcgttgaacttccttgcaacattgaatttgtcctataatatgttggctggaagaataccacaatcgtcacacttctcgacattttccaatgcctcttttgagggaaatattgggctctgcggacccccattgtctaaacaatgtagctaccgatctgaaccaaacatcatgccacatgcttccaagaaggatcccatagatgttctactttttctcttcactgggttgggatttgtacgtagaaaacaaacccaacccagccgtacgttcttcaacatgcgatctgcttaccatctgatgcctctgctagccatgctactcatcctcgtccttgctgaccatacaagctccacggaagcagtagcaccggctgcgtgcctcccagaccaggcagcggcgctgctccagctgaaacgctccttcaacgccaccatcggtgactactctgccgccttccggtcatgggttgccgttgccggcgcagactgttgcagctgggacggcgtccggtgcggcggcgccggcggccgtgtcacctcgctcgacctgagccaccgtgatttgcaagccgcctcaggtcttgacgacgcactcttcagcctaacctcgctggaataccttgacctctcttccaacgacttcggcaagtcccagatgccagccacagggttcgagaagctcaccgggctcacccatcttgacctctccaacacaaacttcgccggcctggtacctgccggcatcggccgcctcaccagactctcctaccttgacctgtcgacaacattttttgtagaggagttggacgacgagtacagcatcacgtactactactcggacacaatggcacagctctcggagtcgagcttggagaccttgctcgcaaacctcaccaacctggaggagcttcgcctgggcatggtggtggtgaagaacatgtcgagcaacggcactgcacggtggtgcgacgccatggccaggtcctccccgaagctgagggtcattagcatgccgtactgctcactctccggtcccatttgccactcactctcagccttgcgatcacttgcagtgatagagctgcactacaatcatttatctggtccagttcctgggttcttggctactctctccaacctaagtgtccttcagctttcaaacaacaagtttgagggatggttccctcccatcatcttccagcacgagaaattaacaactattaacctcaccaaaaatcttggaatctccggaaatttgcctaatttctcaggtgagagtgtcttacagagtatatctgtcagcaacaccaacttctccggcacaattccaagttctatcagcaacctcaaatctctgaagaagttggctcttggagctagtggtttctctggagtgctgccatcctccatcggtaagatgaaatccttatctttactagaggtgtctgggttagatctagtaggatccataccatcatggatctcaaacctgacttctcttaatgttctcaagttcttcacttgtggattgtctggacccataccatcgtccatagggtacttaacaaaattgacaaaattggcactgtacaattgccagttttcaggcgagataccttcactgatcttaaatttgactaaattggaaaccctcctgctccattcaaacagttttgtcgggatagtggaactaacctcatactcaaaactgcaaaacctgtatgtcctgaatctttcaaacaataaactaattgtgatagatggagaaaataattcttctctagtgtcatatcccagtattagcttcttacgtctcgcatcttgtagcatatctagctttcctaacatcttgaggcatctccctgagattactagtctcgacctttcatataaccaactgcaaggtgcaatacctcagtggacatgggagacctggacgatggacttttccttgctgaacctatcacataataaccttaggagcattggacctgatcctttgcttaatctttacattgagttcttagatctcagtttcaacaattttgaaggcaccatacctataccagaacaaggaagtgtcacacttgattactcaaacaaccgattctcatctatgcctatgcctcttaatttctctacttaccttatgaatacagtaattttcaaggtctccagaaatagcctctctggatacattccaccaacgatttgtgatgcaattaagagtttacaaattattgatctctcttataacaacttgactggatcaataccatcatgtctgatggaggatgtaggtgcactacaagtcttaaatctaaaaggaaataagcttgatggcgagttgcctgataatatcaaagaaggttgtgcattaagtgcattggattttagcgacaatctgattcaaggacagctacccagatctctagttgcttgcaggaatctggagatccttgacattggaaacaatcagattagtgattccttcccttgttggatgagtaaacttcctgtgcttcgagtcctggtcctccagtctaacaagttcattgggcaggtactggatccttcatatactagatacgggaataactgtcaatttacaagtttgcggattgccgacatagcctcaaacaacttcagtggcacgttgccagaagagtggtttaagatgcttaggtctatgatgtccagctctgataatggaacttcagtcatggaacatctctatccccgggagaggtacaagtttactgttgcagtcacatacaaaggcagtcacatgacattttccaagattttaacgtcacttgtactcatcgatgtctcaaacaataaattccatggtaacatccctgccggcattgaagaacttgtgttacttcatgggctcaacatgtctcataacgtccttacaggaccaattcccactcaatttggcaaattagacaaccttgagacattagacctctcctcgaataagctttctggtgagatcccgcaggagctggcatcattgaacttcctttcaatattgaatttgtcttataatatgttggatggaaaaataccacaatcattacacttctccacattttccaatgactcttttgtggggaatattgggttgtgtggacctccgttgtctaaacaatgcggttatccaactgaaccaaacatgatgtcacacactgctgagaagaattccatagatgttctactctttctcttcacagcattggggtttggtatctgtttcggaattacaattctagtgatatggggaggccacaacaggaaacaaccttgtgagagagcaattttatacattggcagaatagtttggtag
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| Protein seq | MCAIELKQTQPSDMLSNSKRVSYHLMHLLAMLPILLHVQSMAAPVPCLPDQASALLQLKRSFNTTVGDYSAAFRSWVAGTDCCHWNGVRCGGSDGHITSLDLSHRDLQASGLDDALFSLTSLEYLDISWNDFSASKLPAIGFEKLAELTHLDLCTTNFAGRVPVGIGRLKSLAYLDLSTTFFLYEQDEENSITYYYSETMSQLSEPSLETLLANLTNLEELRLGMVNMSSNGARWCDAIARSSPKLRVISMPYCSLSGPICHSLSALRSLSVIELHYNHLSGPVPELLATLSNLTVLQLSNNMLEGVFPPIIFQLQKLTSISLTNNLGISGKLPNFSAHSYLQSISVSNTNFSGTIPASISNLKYLKELALGASGFSGMLPSSIGKLKSLHILEVSGLELQGSMPSWISNLTFLNVLKFFHCGLSGPIPASVGSLTKLRELALYNCHFSGEVAALISNLTRLQTLLLHSNNFIGTVELASYSKLQNLSVLNLSNNKLVVVDGENSSSVVSYPSISFLRLASCSISSFPNILRHLPYITSLDLSYNQIQGAIPQWTWETWTMNFFLLNLSHNNFTSIGSNPLLPLYIEYFDLSFNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYLKNTVVLKASDNSLSGNIPSSICDAIKSLQLLDLSNNNLTGSMPSCLTQDASALQVLSLKQNHLTGELPDNIKEGCALSALDFSGNMIQGQLPRSLVACRNLEILDIGNNQISDHFPCWMSKLPELQVLVLKSNKFHGKIMDPLYTRDGNNCQFSMLRIADIASNNFSGTLPEELFKMLKSMMTRSDNETLVMEHQYSHGQTYQFTAALTYKGNDITISKILRSLVLIDVSNNEFDGSIPSSIGELALLHGLNMSHNMLTGPIPTQFDNLNNLESLDLSSNKLSGEIPQELASLNFLATLNLSYNMLAGRIPQSSHFSTFSNASFEGNIGLCGPPLSKQCSYRSEPNIMPHASKKDPIDVLLFLFTGLGFVRRKQTQPSRTFFNMRSAYHLMPLLAMLLILVLADHTSSTEAVAPAACLPDQAAALLQLKRSFNATIGDYSAAFRSWVAVAGADCCSWDGVRCGGAGGRVTSLDLSHRDLQAASGLDDALFSLTSLEYLDLSSNDFGKSQMPATGFEKLTGLTHLDLSNTNFAGLVPAGIGRLTRLSYLDLSTTFFVEELDDEYSITYYYSDTMAQLSESSLETLLANLTNLEELRLGMVVVKNMSSNGTARWCDAMARSSPKLRVISMPYCSLSGPICHSLSALRSLAVIELHYNHLSGPVPGFLATLSNLSVLQLSNNKFEGWFPPIIFQHEKLTTINLTKNLGISGNLPNFSGESVLQSISVSNTNFSGTIPSSISNLKSLKKLALGASGFSGVLPSSIGKMKSLSLLEVSGLDLVGSIPSWISNLTSLNVLKFFTCGLSGPIPSSIGYLTKLTKLALYNCQFSGEIPSLILNLTKLETLLLHSNSFVGIVELTSYSKLQNLYVLNLSNNKLIVIDGENNSSLVSYPSISFLRLASCSISSFPNILRHLPEITSLDLSYNQLQGAIPQWTWETWTMDFSLLNLSHNNLRSIGPDPLLNLYIEFLDLSFNNFEGTIPIPEQGSVTLDYSNNRFSSMPMPLNFSTYLMNTVIFKVSRNSLSGYIPPTICDAIKSLQIIDLSYNNLTGSIPSCLMEDVGALQVLNLKGNKLDGELPDNIKEGCALSALDFSDNLIQGQLPRSLVACRNLEILDIGNNQISDSFPCWMSKLPVLRVLVLQSNKFIGQVLDPSYTRYGNNCQFTSLRIADIASNNFSGTLPEEWFKMLRSMMSSSDNGTSVMEHLYPRERYKFTVAVTYKGSHMTFSKILTSLVLIDVSNNKFHGNIPAGIEELVLLHGLNMSHNVLTGPIPTQFGKLDNLETLDLSSNKLSGEIPQELASLNFLSILNLSYNMLDGKIPQSLHFSTFSNDSFVGNIGLCGPPLSKQCGYPTEPNMMSHTAEKNSIDVLLFLFTALGFGICFGITILVIWGGHNRKQPCERAILYIGRIVW |
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| Function | Receptor-like protein 6 [UniProtKB/Swiss-Prot:Q9C637] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0007170 | OsCMeo_12g0007170.01 | Chr12 | 6046144 | 6053067 | + | NAM | ||
| CDS seq | atgtgtgccatagagttgaaacaaacccaaccttccgacatgttgtccaactccaagagagtttcttaccatctgatgcatctcctggccatgctacccatcctcctacatgttcagtccatggcggcgccagttccatgccttccagaccaggcatcggcgctgctccagctgaaacgctccttcaacaccacggtcggtgactactccgcggccttccgatcatgggtcgccggcacagactgctgccactggaatggcgtccgctgtggcggatccgatggccatatcacctccctcgacctgagtcaccgtgatttgcaagcctcaggtcttgatgatgcactcttcagtctaacctccctcgagtaccttgacatctcttggaacgacttcagtgcgtccaagctcccagccattgggtttgagaagctcgccgagctcacccatcttgacctctgcaccaccaacttcgccggccgggtacccgttggcatcggccgcctcaagagcctggcctaccttgacctgtctacaacattctttctatatgagcaggacgaggagaacagcatcacctattactactcagaaacaatgtcacagctctcggaaccgagcttggagaccttgctcgcaaacctcaccaacctggaggagcttcgcctgggcatggtgaacatgtcaagcaacggcgcacggtggtgcgacgccatagccaggtcctccccaaagctgcgggtcattagcatgccgtactgctcactctccggtcccatttgccactcactctcggccttgcgatcactttcagtgatagagctgcactacaatcatttgtctggtccagttcctgagctcctggctactctctccaaccttactgttcttcagctttcaaataacatgcttgaaggggtgtttcctcccatcatattccagcttcagaaattaactagtattagcctcactaataatcttgggatctccggaaaactgcctaatttctctgctcacagttacttacagagtatatctgtgagcaacaccaacttctccggcacaattccagcttccatcagcaacctcaaatatctgaaggagttggcacttggagctagtggtttctctggaatgctgccatcttccattggtaagctgaaatctttacatatactagaggtgtctgggttagagctacaaggatccatgccgtcatggatttcaaatctgacttttttgaatgttctcaagttcttccattgtggtttgtccggaccaatacctgcttctgtcggatccttaacgaaattgagagaattggcactgtacaattgccacttttcaggagaggtagctgcgctgatatcaaatttgactcgcttgcaaaccctcctgctccattcaaacaactttattggcacagtggagctagcctcatactcaaaactgcaaaatctttctgtcctcaatctctcaaataataaactagttgtggttgatggagaaaatagttcttcagtagtgtcctaccccagtattagcttcttacgtctagcatcttgcagcatatctagcttccctaacatcttgaggcatctcccttatattactagtcttgacctttcatataaccagatccaaggtgcaatacctcagtggacatgggagacatggacgatgaactttttcttgttgaacctatcacataataactttacgagtattggatccaatcctttacttcccctttacattgaatactttgatctcagtttcaacaattttgatggagcaataccagtaccacaaaaaggaagtatcacacttgattactcaaccaaccggttctcatctatgcctcttaatttctccagttaccttaagaatacagtcgttctcaaagcctccgacaatagcctctctggaaacattccctcatcgatttgtgatgcaattaagagtttacaactacttgatctctctaataacaacttgacaggctcaatgccatcatgtctgacgcaagatgcaagtgcattgcaggtattaagtctaaaacaaaaccatcttactggcgagttacctgataatatcaaggaaggttgtgcattaagtgcattagacttcagcggcaatatgattcaaggacagctaccaagatctttggttgcctgtaggaatctggagatccttgacatcggcaacaatcaaattagtgaccacttcccatgttggatgagtaaacttcctgaacttcaagtcctggtcctcaagtctaacaagttccatgggaaaataatggatcctttgtataccagagatggaaacaactgtcaattttccatgttgcggattgctgacatagcctcaaacaacttcagtggcacattgccagaagagttgtttaagatgctcaagtccatgatgaccaggtcagataacgagactttagtcatggaacatcagtattcccacggccagacataccagtttactgctgcactcacatacaaaggcaatgacataacaatttccaagatcttgagatcacttgtgctcattgatgtctcaaataatgaattcgatggtagcatcccttcaagcattggggaacttgcgttgcttcatggactcaacatgtctcataacatgcttacagggccaattccaactcagtttgacaatttgaacaaccttgagtcgttggacctctcctcaaataagctttctggtgagattccacaagagctagcatcgttgaacttccttgcaacattgaatttgtcctataatatgttggctggaagaataccacaatcgtcacacttctcgacattttccaatgcctcttttgagggaaatattgggctctgcggacccccattgtctaaacaatgtagctaccgatctgaaccaaacatcatgccacatgcttccaagaaggatcccatagatgttctactttttctcttcactgggttgggatttgtacgtagaaaacaaacccaacccagccgtacgttcttcaacatgcgatctgcttaccatctgatgcctctgctagccatgctactcatcctcgtccttgctgaccatacaagctccacggaagcagtagcaccggctgcgtgcctcccagaccaggcagcggcgctgctccagctgaaacgctccttcaacgccaccatcggtgactactctgccgccttccggtcatgggttgccgttgccggcgcagactgttgcagctgggacggcgtccggtgcggcggcgccggcggccgtgtcacctcgctcgacctgagccaccgtgatttgcaagccgcctcaggtcttgacgacgcactcttcagcctaacctcgctggaataccttgacctctcttccaacgacttcggcaagtcccagatgccagccacagggttcgagaagctcaccgggctcacccatcttgacctctccaacacaaacttcgccggcctggtacctgccggcatcggccgcctcaccagactctcctaccttgacctgtcgacaacattttttgtagaggagttggacgacgagtacagcatcacgtactactactcggacacaatggcacagctctcggagtcgagcttggagaccttgctcgcaaacctcaccaacctggaggagcttcgcctgggcatggtggtggtgaagaacatgtcgagcaacggcactgcacggtggtgcgacgccatggccaggtcctccccgaagctgagggtcattagcatgccgtactgctcactctccggtcccatttgccactcactctcagccttgcgatcacttgcagtgatagagctgcactacaatcatttatctggtccagttcctgggttcttggctactctctccaacctaagtgtccttcagctttcaaacaacaagtttgagggatggttccctcccatcatcttccagcacgagaaattaacaactattaacctcaccaaaaatcttggaatctccggaaatttgcctaatttctcaggtgagagtgtcttacagagtatatctgtcagcaacaccaacttctccggcacaattccaagttctatcagcaacctcaaatctctgaagaagttggctcttggagctagtggtttctctggagtgctgccatcctccatcggtaagatgaaatccttatctttactagaggtgtctgggttagatctagtaggatccataccatcatggatctcaaacctgacttctcttaatgttctcaagttcttcacttgtggattgtctggacccataccatcgtccatagggtacttaacaaaattgacaaaattggcactgtacaattgccagttttcaggcgagataccttcactgatcttaaatttgactaaattggaaaccctcctgctccattcaaacagttttgtcgggatagtggaactaacctcatactcaaaactgcaaaacctgtatgtcctgaatctttcaaacaataaactaattgtgatagatggagaaaataattcttctctagtgtcatatcccagtattagcttcttacgtctcgcatcttgtagcatatctagctttcctaacatcttgaggcatctccctgagattactagtctcgacctttcatataaccaactgcaaggtgcaatacctcagtggacatgggagacctggacgatggacttttccttgctgaacctatcacataataaccttaggagcattggacctgatcctttgcttaatctttacattgagttcttagatctcagtttcaacaattttgaaggcaccatacctataccagaacaaggaagtgtcacacttgattactcaaacaaccgattctcatctatgcctatgcctcttaatttctctacttaccttatgaatacagtaattttcaaggtctccagaaatagcctctctggatacattccaccaacgatttgtgatgcaattaagagtttacaaattattgatctctcttataacaacttgactggatcaataccatcatgtctgatggaggatgtaggtgcactacaagtcttaaatctaaaaggaaataagcttgatggcgagttgcctgataatatcaaagaaggttgtgcattaagtgcattggattttagcgacaatctgattcaaggacagctacccagatctctagttgcttgcaggaatctggagatccttgacattggaaacaatcagattagtgattccttcccttgttggatgagtaaacttcctgtgcttcgagtcctggtcctccagtctaacaagttcattgggcaggtactggatccttcatatactagatacgggaataactgtcaatttacaagtttgcggattgccgacatagcctcaaacaacttcagtggcacgttgccagaagagtggtttaagatgcttaggtctatgatgtccagctctgataatggaacttcagtcatggaacatctctatccccgggagaggtacaagtttactgttgcagtcacatacaaaggcagtcacatgacattttccaagattttaacgtcacttgtactcatcgatgtctcaaacaataaattccatggtaacatccctgccggcattgaagaacttgtgttacttcatgggctcaacatgtctcataacgtccttacaggaccaattcccactcaatttggcaaattagacaaccttgagacattagacctctcctcgaataagctttctggtgagatcccgcaggagctggcatcattgaacttcctttcaatattgaatttgtcttataatatgttggatggaaaaataccacaatcattacacttctccacattttccaatgactcttttgtggggaatattgggttgtgtggacctccgttgtctaaacaatgcggttatccaactgaaccaaacatgatgtcacacactgctgagaagaattccatagatgttctactctttctcttcacagcattggggtttggtatctgtttcggaattacaattctagtgatatggggaggccacaacaggaaacaaccttgtgagagagcaattttatacattggcagaatagtttggtag
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| Protein seq | MCAIELKQTQPSDMLSNSKRVSYHLMHLLAMLPILLHVQSMAAPVPCLPDQASALLQLKRSFNTTVGDYSAAFRSWVAGTDCCHWNGVRCGGSDGHITSLDLSHRDLQASGLDDALFSLTSLEYLDISWNDFSASKLPAIGFEKLAELTHLDLCTTNFAGRVPVGIGRLKSLAYLDLSTTFFLYEQDEENSITYYYSETMSQLSEPSLETLLANLTNLEELRLGMVNMSSNGARWCDAIARSSPKLRVISMPYCSLSGPICHSLSALRSLSVIELHYNHLSGPVPELLATLSNLTVLQLSNNMLEGVFPPIIFQLQKLTSISLTNNLGISGKLPNFSAHSYLQSISVSNTNFSGTIPASISNLKYLKELALGASGFSGMLPSSIGKLKSLHILEVSGLELQGSMPSWISNLTFLNVLKFFHCGLSGPIPASVGSLTKLRELALYNCHFSGEVAALISNLTRLQTLLLHSNNFIGTVELASYSKLQNLSVLNLSNNKLVVVDGENSSSVVSYPSISFLRLASCSISSFPNILRHLPYITSLDLSYNQIQGAIPQWTWETWTMNFFLLNLSHNNFTSIGSNPLLPLYIEYFDLSFNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYLKNTVVLKASDNSLSGNIPSSICDAIKSLQLLDLSNNNLTGSMPSCLTQDASALQVLSLKQNHLTGELPDNIKEGCALSALDFSGNMIQGQLPRSLVACRNLEILDIGNNQISDHFPCWMSKLPELQVLVLKSNKFHGKIMDPLYTRDGNNCQFSMLRIADIASNNFSGTLPEELFKMLKSMMTRSDNETLVMEHQYSHGQTYQFTAALTYKGNDITISKILRSLVLIDVSNNEFDGSIPSSIGELALLHGLNMSHNMLTGPIPTQFDNLNNLESLDLSSNKLSGEIPQELASLNFLATLNLSYNMLAGRIPQSSHFSTFSNASFEGNIGLCGPPLSKQCSYRSEPNIMPHASKKDPIDVLLFLFTGLGFVRRKQTQPSRTFFNMRSAYHLMPLLAMLLILVLADHTSSTEAVAPAACLPDQAAALLQLKRSFNATIGDYSAAFRSWVAVAGADCCSWDGVRCGGAGGRVTSLDLSHRDLQAASGLDDALFSLTSLEYLDLSSNDFGKSQMPATGFEKLTGLTHLDLSNTNFAGLVPAGIGRLTRLSYLDLSTTFFVEELDDEYSITYYYSDTMAQLSESSLETLLANLTNLEELRLGMVVVKNMSSNGTARWCDAMARSSPKLRVISMPYCSLSGPICHSLSALRSLAVIELHYNHLSGPVPGFLATLSNLSVLQLSNNKFEGWFPPIIFQHEKLTTINLTKNLGISGNLPNFSGESVLQSISVSNTNFSGTIPSSISNLKSLKKLALGASGFSGVLPSSIGKMKSLSLLEVSGLDLVGSIPSWISNLTSLNVLKFFTCGLSGPIPSSIGYLTKLTKLALYNCQFSGEIPSLILNLTKLETLLLHSNSFVGIVELTSYSKLQNLYVLNLSNNKLIVIDGENNSSLVSYPSISFLRLASCSISSFPNILRHLPEITSLDLSYNQLQGAIPQWTWETWTMDFSLLNLSHNNLRSIGPDPLLNLYIEFLDLSFNNFEGTIPIPEQGSVTLDYSNNRFSSMPMPLNFSTYLMNTVIFKVSRNSLSGYIPPTICDAIKSLQIIDLSYNNLTGSIPSCLMEDVGALQVLNLKGNKLDGELPDNIKEGCALSALDFSDNLIQGQLPRSLVACRNLEILDIGNNQISDSFPCWMSKLPVLRVLVLQSNKFIGQVLDPSYTRYGNNCQFTSLRIADIASNNFSGTLPEEWFKMLRSMMSSSDNGTSVMEHLYPRERYKFTVAVTYKGSHMTFSKILTSLVLIDVSNNKFHGNIPAGIEELVLLHGLNMSHNVLTGPIPTQFGKLDNLETLDLSSNKLSGEIPQELASLNFLSILNLSYNMLDGKIPQSLHFSTFSNDSFVGNIGLCGPPLSKQCGYPTEPNMMSHTAEKNSIDVLLFLFTALGFGICFGITILVIWGGHNRKQPCERAILYIGRIVW
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0007170 | OsCMeo_12g0007170.02 | Chr12 | 6046150 | 6049436 | + | IsoSeq | ||
| CDS seq | attcatgtgtgccatagagttgaaacaaacccaaccttccgacatgttgtccaactccaagagagtttcttaccatctgatgcatctcctggccatgctacccatcctcctacatgttcagtccatggcggcgccagttccatgccttccagaccaggcatcggcgctgctccagctgaaacgctccttcaacaccacggt
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| Protein seq | IHVCHRVETNPTFRHVVQLQESFLPSDASPGHATHPPTCSVHGGASSMPSRPGIGAAPAETLLQHHG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.891639 | 0.527976 | 1.866642 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0222800 | RBH | 0.758600 | 0.940451 | 0.444868 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g12130 | RBH | 1.438427 | 0.803418 | 0.134759 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0218500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0007040 | RBH | 0.175668 | 1.262008 | 0.119848 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0007130 | SBH | 0.041188 | 0.0 | 0.300094 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0007140 | RBH | 0.270052 | 0.0 | 1.592091 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0007030 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0006970 | RBH | 0.802722 | 1.696579 | 2.660084 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0092100 | RBH | 0.691954 | 1.747655 | 0.1323865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006900 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0097500 | RBH | 0.614286 | 4.6201595 | 0.949073 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0006760 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0007070 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006960 | RBH | 0.0 | 6.204627 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0007010 | RBH | 0.120750 | 0.0 | 0.221219 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0006920 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G006950 | RBH | 2.465152 | 0.0 | 0.526518 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0006940 | RBH | 0.152372 | 0.0 | 0.377484 |
