Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0423800 | OGI:11078710 | 9/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:31624825-31625691 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACATTAGGTATCCTGTACCCAGTTCGAATACCATCGCCGTGTAGATATGGGATACCCATAATCTCCACAATCTGTTTACAGAGCATCCTGTTTTCACATTATCACCAGAAACTAGACTGGACTTATCAGTAACTGCTTCCATGACAGATGAACCCAAATACTTCTCATGAAATTCTTTCACATGATGTCTCAACATATGGATGGTTCTTGGAACGAGTAGTTGGAAGGATGTAGGAGCATCTATTTGCGATGATTCTGCATCACCAGAGTTGGAATTTACTGGGAGACTTTCAGATAATGCTGTAGCGACGCTCTTTAAGTCATCTACTTCAAGAGTGCTCACTATGCCATCTCCTTTACGAAAGTTAGCAATGATACAATGCCACAAAGGTGCCACGAAAGTTAGCAATGTTAGTGTGAACGCAAAATATGATCTTGCGGCTAAACCTAAAATCGGCAAAGAGATATTTTGTTTAGGGCGATCGCTACAGTGATCGATCTCTCATGAACATCCCTGATCGGGGGATAACCGCCATACCCTAGTGTCGGTTCCCCCTGTGTGCAGTGGCTATAAATAGAGATCAATACCTAAGTGTTAAACCTTAAGAGATTTCTCTCGCTACCCGATCAAGCAACCCACTGAAACACTGGGAAGAACCAAGACACGATTCTCTCTGTGCTTCCAAACTAGAAGAGAAGAAAGAAGAACAAAGACAGAGAGATGGGAACTCCAGGAGATCAAGGTATGATCCAATCCCATTTCAATTTGTAGTTCCACTTTGTGCCAAACCGATCCAAAGCAATCCAACAAGCAATGCATACAATGGCCAACGTCAAAGGCAACTGATACGTGGGCGAGAGGCAT
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| CDS seq | ATGCCTCTCGCCCACGTATCAGTTGCCTTTGACGTTGGCCATTGTTTAGCCGCAAGATCATATTTTGCGTTCACACTAACATTGCTAACTTTCGTGGCACCTTTGTGGCATTGTATCATTGCTAACTTTCGTAAAGGAGATGGCATAGTGAGCACTCTTGAAGTAGATGACTTAAAGAGCGTCGCTACAGCATTATCTGAAAGTCTCCCAGTAAATTCCAACTCTGGTGATGCAGAATCATCGCAAATAGATGCTCCTACATCCTTCCAACTACTCGTTCCAAGAACCATCCATATGTTGAGACATCATGTGAAAGAATTTCATGAGAAGTATTTGGGTTCATCTGTCATGGAAGCAGTTACTGATAAGTCCAGTCTAGTTTCTGGTGATAATGTGAAAACAGGATGCTCTGTAAACAGATTGTGGAGATTATGGGTATCCCATATCTACACGGCGATGGTATTCGAACTGGGTACAGGATACCTAATGTAG
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| Protein seq | MPLAHVSVAFDVGHCLAARSYFAFTLTLLTFVAPLWHCIIANFRKGDGIVSTLEVDDLKSVATALSESLPVNSNSGDAESSQIDAPTSFQLLVPRTIHMLRHHVKEFHEKYLGSSVMEAVTDKSSLVSGDNVKTGCSVNRLWRLWVSHIYTAMVFELGTGYLM |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0423800 | OsMH63_11T0423800.1 | Chr11 | 31624825 | 31625691 | - | maker | ||
| CDS seq | ATGCCTCTCGCCCACGTATCAGTTGCCTTTGACGTTGGCCATTGTTTAGCCGCAAGATCATATTTTGCGTTCACACTAACATTGCTAACTTTCGTGGCACCTTTGTGGCATTGTATCATTGCTAACTTTCGTAAAGGAGATGGCATAGTGAGCACTCTTGAAGTAGATGACTTAAAGAGCGTCGCTACAGCATTATCTGAAAGTCTCCCAGTAAATTCCAACTCTGGTGATGCAGAATCATCGCAAATAGATGCTCCTACATCCTTCCAACTACTCGTTCCAAGAACCATCCATATGTTGAGACATCATGTGAAAGAATTTCATGAGAAGTATTTGGGTTCATCTGTCATGGAAGCAGTTACTGATAAGTCCAGTCTAGTTTCTGGTGATAATGTGAAAACAGGATGCTCTGTAAACAGATTGTGGAGATTATGGGTATCCCATATCTACACGGCGATGGTATTCGAACTGGGTACAGGATACCTAATGTAG
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| Protein seq | MPLAHVSVAFDVGHCLAARSYFAFTLTLLTFVAPLWHCIIANFRKGDGIVSTLEVDDLKSVATALSESLPVNSNSGDAESSQIDAPTSFQLLVPRTIHMLRHHVKEFHEKYLGSSVMEAVTDKSSLVSGDNVKTGCSVNRLWRLWVSHIYTAMVFELGTGYLM |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.1014045 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0677425 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45250 | SBH | 0.352758 | 0.413491 | 0.353312 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0677425 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023900 | SBH | 0.136281 | 0.941221 | 2.884898 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023590 | SBH | 0.0 | 0.385141 | 1.234081 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023230 | SBH | 0.151328 | 0.000000 | 2.233977 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023180 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023810 | SBH | 0.000000 | 0.000000 | 4.628242 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024120 | SBH | 0.103579 | 0.0 | 0.404307 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0432200 | SBH | 4.471516 | 17.1407165 | 21.8625135 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023870 | SBH | 0.059386 | 0.025588 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023870 | SBH | 0.130461 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023440 | SBH | 3.879039 | 2.263177 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023130 | SBH | 0.253349 | 0.0 | 0.370752 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023340 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023410 | SBH | 0.143072 | 0.956373 | 0.126342 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023850 | SBH | 1.021474 | 1.032073 | 0.421065 |
