Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0402900 | OGI:11075910 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:30388932-30393917 | ||||||||
| Gene Symbol | RLCK346, OsRLCK346 | ||||||||||
| DNA seq | ACTCCTGTTTGTGTCGCCTTCTTCCAATTTCCAACCTTTTCCTCGGTCAGACAAAACTGCTTGACATCGTTCTCGTCGTACACTATCCCAATAATCCACCTTCCAGTGATTTTCCTCACCTTACCATTCGTTTGCTCTTCTTGGCACCAAGCAACAAGTAGACAGGTTAATCCTTGCGAGTTTGGAGATCGCCACGGCGAGATCATGTGGAGCGGGCTGGGGCAGGCGGCGACGGTGGTGCAGCTGGTCGGGGCGGATGTCGGCAGCCTCATCTCCGTCATCATGCAGGCGGCGATGACGGCTCGACAGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGCGTCTTCATGATCGCCGAGCTGCTGCCGCACCTGCAGGATCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGCCGCTCGCCGGGCTCGACGACGCGCTCCGGGAGGCGCACGAGCTCGTGACATCGTGCCAGGGAAGGGCCGCGGCCTACCGGTTGGTGACGGCATGGCGGCAGGCCGAGAGGTTCAGAGAAGTTCAGAGCAAGATCGACTCGTACCTCCTCGTCTTCCCCTTCATCAGCCACATCGACATCACCCGCCGCCTCGATCGAATCTACAGAGTTCTTCTTCCAAACGACGCGATCGTGCCATCCGCATCTGCAGGACTCCCGAATCATGAGATGATACTACAAATTTTAAGCAATTTTATAGTTCTTGAGGAGGTACAAATTTTAAGTAATTTTACACTAAATTTTCTGTACCTTTTAAGGACTGTAAAATTGCTCACAAATTTTTATTCGGCTTCTTCCGAAATTAATACCATCTCTTGGTGCTTGCTCTGATGAAGAAAAAACTTGTTAATTTGTATGCTTTGTCTTGTGTGTCCTAGGAAGGTGAGAGATTCACCATGGCAGAGCTCGCTGCGGCGACCAATAACTTTGCAACTGACAGACAGATCGGTACAAACCCAGTAGCCAGGGTGTACAAGGGATGGCTTGCCGACGGGCGGGAGGTGGCCGTCAAGCAGCTGGTAGGCAACAGCAACCTATCTCTGGCAGTCGAGGAGGAGTTCCAGGCAGAGCTCTCGCTCCTCTCGATCCGCCACAGCCACATCGTCCGCCTCCTGGGCTGATGCGCGGCGGAGGGGAAGCACCTGGTCGTGTACGAGTACATGAAGAACGGCACGCTCGACGACCACCTGCACGGTGCCCCGTCGTCGCCGGTGACGACGTCGTGGAGAACGCGCGTCGAGATACTGCTGGGCGTGTCGCGGGCCGTCGAGCACCTGCAGTCCTCCTCCTCGGACGGCGAGCGGCGGCGGCCGGTGATCCACTGCGACATCAAGCCGTCCAACATCCTGCTCGACGACGCGTGGGCGCCGCGCCTGACGGACTTCGGCCTGTCGCTCACCTGGGACGAGAGGGAGTGTAGTTCGGAACTGCCGGTCGTAGGCACGTGCGGCTACGCCGCCCCGGAGTACGTCGCGACGGGGTGCATCAGGCCGGCGAGCGACGTCTACGGCCTCGGCGTCGTGATGCTGGAGGTGTTGACGGGGAGGAAGGCACTGTCTCAACGAGCAGTGGTACTGAACGATGGGTGTACTCGTTTCGCCCACGAGAGCTTGGTGGAATTGGCGCTGCCAATGATACGGTCGGGGAAGGCTTCTGGACAAACGCCTGACACCGACGCCGACGCGGAGGCAGCTCCGGGCGGCGGACATGGTGGCGCGCACGGCAGCGCGCTGCTTGCTGCATGATTGGGTGAAACGGCCGGCCATCTCGGAAGTCGTGGTCGATCTCAAGGCGGCGCTCGAGCTCGTCCGTTTCGACGTGTAGCGACCAGCTTGACATGAATCTGCAAATATTTAGACATCGATATATATCGTCACAAAATTTTATTGGTATTTATAATAAGTCGTTTCCAGTGCAAACATGCATGCTGCTGCTGTCCAAAACTGGCACATATATACATATATATATATATATATATATATATATATATATATACTCCCTTCATCCCATAATACGTAGTATAAGGGATTTTGAGTTTTTGTTTGTACTCTTTGACCACTCGTCTTATTCAAAAAAATTTAGAATTATTATTTATTTTTTTGACTTACTTTATTATCTAAAGTACTTTAAGCATAACTTTTCGTTTTTTATATTTGCACAAATTTTTTTTTGAATAAAACGAGTGGTCAAACAGTAAAAAAAACTCAAAATCCCTTGTATTATGGGACGGATGGAGTATTTGTGAAATCAAATGGGTCTATCTAAAACTTTCAACAATTTTTTTTTCTCAAAAGCTTCCAAATATAAAACTCTAATGTAATAATTATATAGCAACTTGAGTGTAACTGCAATGAAACTATACGTAGCTAGCGTCGTTCGCTTCCATCCACGAGGACCTTTGCAGCAAGCAGGCGAGCCAAGACGAGCAGAGTGAGCAACTGAAAGTTGGTTAGCTATTCTGATTCCTGTTGTCTTGCTTGTAAGTTAAAACAAGATTTCAACTTCTTTCTTTACTTGATCGATGGGCGACACGAATTAATAGATCACCAAGTAGATTGAATATGTTTTACTAAATAGATAAAAAATGTTTTAGTCTACTTGAATATGTTTCACTAAATAGATAAAAAATGTTTTAGTTTTTTAAAGAACTGAAACATAATCAACTCACCTCATGAAACATTTTGCTACAACATATGAAACAACGGTTTTCAAAAAATCAGATGTTGTTTCACCTTATATAAAAACAATGTTTCAGCAAGTAGCGAAAGAATGTTTAATTCTTAAAAAAAAAGTGAAACACGGTCAGATCGCTAGATGAAACAATTTGATTCAACGTATACAACAAACGATTTGAAGCCATTGCAACACTAAAACCCCATATACATCAACAACCCATGTGTCCATCAAGATGAAATTATTAAACAGTATAAAAATTCACTGCAACATTTGACCCATACACAGTGAAACATCACGAGTACACTAGCTGAAACATTATTGGTTGAAAAAAATGAAACGGATCCCCCTTAATAGGGCATTTCCGTTATATCCGGGCAACTGTTGCAACAGGGCGCGCTGTGGTGGGGATGCGTGGTGGGCGCGGGCGCACGTGGGCGGTAGGCGCGCGGGCGCCTGATTTTTTTGGCGCGCATCGGGCGACCGGTGCTGAGGATTTTCGCGAAATAATACCTGGAGGAAAATATTACAGTTCTGCACATTCTTTTCTGTCCTTCCATTGCCCATCAATCCAATGGGTGATTATTCACTTTACCTCATAGGAGGTAATAGATCACAAAACAGGAAAGATATGAATTCTCTCAAACTTACAAAGTTTGCCGCTTATAAAAAAAAATATTAATGAAACGTTACAAAAATAAGGTAAGTGAAAAACATTTCAGTAACTATTTCTTTATAAGCAGCAGCCTTAAAAATCCAAATTCGTATTTGGATTAGATGTAAAAATGTGCCTTTTAGATTTACCAACGCATAAATCTAGGTTATATACCCCATTGAGCTAGAATTGATCGTCACTCATTTTCAAAAGAAAAAAGAAGTCTGAATTACCCCCTGACTTACGCGGTACACACGTGACAATCTACTAGACAAAAGAATAAAAATTAGTGGAACGCACCTGGCAGCGTTAATTTCTCTTCATCCGTTATAGTTTACTGCTGTTCAATCAGTGGAACTCTTTTTTTTTTTTTGAACTGCACTCTTTTTTTCGAATTATCTGGGTTTGATGATCTAGTAGTGTTGATCTGTTAGTCGATTGTGTAGCCGCATTGCTTAAGCGGTTGTGGTCTTGTGGTTGTTATCATGACACTTTCTTGTTGATAAGCTGACGACAGGAGTTCTGTCAGATATATATTAAGGAGTAAAAGAGTTTAAAATCATAAACAAGTTCAAGAGTTTGTTACAGATCAGGTGAAAGAGAAGAAATGAAGAAGCACATGTTCAAAATCATAACATATGACACTTCCACAAGTTAACTGTGCCAACAAGAAGACACTAGTCGCAATCAAACATCAAAAGCACTACTTCCTCCATAAAAAAAATCAAACTTTAGAGATGAATCTAGATACATGTGTGTCCACATTCATACCTAGAGTTTGATTCTTTTTGATAGCGGAGTAGTTTTTTTCTACCCTGCAAGGTAAACTAATTACAACAGTATTTTTTTTATTTATTAACATGTAAATTGAGCACATTCAAAAACACTACTCTATTCGTTCCATAATATTGTAACCTACCGCGGAATGAGACACATCCTAACTTATTAGATGGGAGATTTGTTCAGATCCATAGTATTATCATGTCTTACCCTGTACTATATTACAGAACAAAGGGGACAGAGGGAGTAGTTTTTGTGCTAGAAAAAAAGCTAGGATTGAAGCACCGAGAATTTTACTGTTACTAAAAAAAAATCTTCTTCTCACATATAACTTCACATGAAGTGTACTTAGCTACATGTATAATTTATTTAAACGTGTTCTACTAATCGGTATCAAATAATCGCACCGGATAAAAAAAGTGAAATCTTTAACACCTTTAATCTGCCAAAGCAGAGAGGATGAGCGCAAATCTTCATCAGACCACACTCCACTACCACCCACTTTCTGGGAATTGCCTTTCCTTTCTTCCCTTCTACTAGCTAGCAAGTAGCATCCACGCAGTTCTTCCGAGTTCTTTGAGATTGCCACGGCGAGATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGGTGGCGCAGCTGGTCGGCGCAGACGTCGGCAGGCTCATCTCCATGATCATGCAGGCGGCGTTGCCGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGTGTGTTCATGATCGCCGAGCTGCTGCCGCACCTGCAGGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACGCTCCGGCGGTGA
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| CDS seq | ACTCCTGTTTGTGTCGCCTTCTTCCAATTTCCAACCTTTTCCTCGGTCAGACAAAACTGCTTGACATCGTTCTCGTCGTACACTATCCCAATAATCCACCTTCCAGTGATTTTCCTCACCTTACCATTCGTTTGCTCTTCTTGGCACCAAGCAACAAGTAGACAGGTTAATCCTTGCGAGTTTGGAGATCGCCACGGCGAGATCATGTGGAGCGGGCTGGGGCAGGCGGCGACGGTGGTGCAGCTGGTCGGGGCGGATGTCGGCAGCCTCATCTCCGTCATCATGCAGGCGGCGATGACGGCTCGACAGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGCGTCTTCATGATCGCCGAGCTGCTGCCGCACCTGCAGGATCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGCCGCTCGCCGGGCTCGACGACGCGCTCCGGGAGGCGCACGAGCTCGTGACATCGTGCCAGGGAAGGGCCGCGGCCTACCGGTTGGTGACGGCATGGCGGCAGGCCGAGAGGTTCAGAGAAGTTCAGAGCAAGATCGACTCGTACCTCCTCGTCTTCCCCTTCATCAGCCACATCGACATCACCCGCCGCCTCGATCGAATCTACAGAGTTCTTCTTCCAAACGACGCGATCGTGCCATCCGCATCTGCAGGACTCCCGAATCATGAGATGATACTACAAATTTTAAGCAATTTTATAGTTCTTGAGGAGGAAGGTGAGAGATTCACCATGGCAGAGCTCGCTGCGGCGACCAATAACTTTGCAACTGACAGACAGATCGGTACAAACCCAGTAGCCAGGGTGTACAAGGGATGGCTTGCCGACGGGCGGGAGGTGGCCGTCAAGCAGCTGGTAGGCAACAGCAACCTATCTCTGGCAGTCGAGGAGGAGTTCCAGGCAGAGCTCTCGCTCCTCTCGATCCGCCACAGCCACATCGTCCGCCTCCTGGGCTGA
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| Protein seq | TPVCVAFFQFPTFSSVRQNCLTSFSSYTIPIIHLPVIFLTLPFVCSSWHQATSRQVNPCEFGDRHGEIMWSGLGQAATVVQLVGADVGSLISVIMQAAMTARQNKKECEQLARRVFMIAELLPHLQDPEVMRRPEVRRPLAGLDDALREAHELVTSCQGRAAAYRLVTAWRQAERFREVQSKIDSYLLVFPFISHIDITRRLDRIYRVLLPNDAIVPSASAGLPNHEMILQILSNFIVLEEEGERFTMAELAAATNNFATDRQIGTNPVARVYKGWLADGREVAVKQLVGNSNLSLAVEEEFQAELSLLSIRHSHIVRLLG |
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| Function | Protein MID1-COMPLEMENTING ACTIVITY 1 [UniProtKB/Swiss-Prot:Q8L7E9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0402900 | OsMH63_11T0402900-mRNA-1 | Chr11 | 30390104 | 30393917 | + | maker | ||
| CDS seq | ATGAAGAACGGCACGCTCGACGACCACCTGCACGGTGCCCCGTCGTCGCCGGTGACGACGTCGTGGAGAACGCGCGTCGAGATACTGCTGGGCGTGTCGCGGGCCGTCGAGCACCTGCAGTCCTCCTCCTCGGACGGCGAGCGGCGGCGGCCGGTGATCCACTGCGACATCAAGCCGTCCAACATCCTGCTCGACGACGCGTGGGCGCCGCGCCTGACGGACTTCGGCCTGTCGCTCACCTGGGACGAGAGGGAGTGTAGTTCGGAACTGCCGGTCGTAGGCACGTGCGGCTACGCCGCCCCGGAGTACGTCGCGACGGGGTGCATCAGGCCGGCGAGCGACGTCTACGGCCTCGGCGTCGTGATGCTGGAGGTGTTGACGGGGAGGAAGGCACTGTCTCAACGAGCAGTGGTACTGAACGATGGGTGTACTCGTTTCGCCCACGAGAGCTTGGTGGAATTGGCGCTGCCAATGATACGGCTTCTGGACAAACGCCTGACACCGACGCCGACGCGGAGGCAGCTCCGGGCGGCGGACATGGTGGCGCGCACGGCAGCGCGCTGCTTGCTGCATGATTGGGTGAAACGGCCGGCCATCTCGGAAGTCGTGGTCGATCTCAAGGCGGCGCTCGAGCTCGTCCGTTTCGACGTATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGGTGGCGCAGCTGGTCGGCGCAGACGTCGGCAGGCTCATCTCCATGATCATGCAGGCGGCGTTGCCGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGTGTGTTCATGATCGCCGAGCTGCTGCCGCACCTGCAGGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACGCTCCGGCGGTGA
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| Protein seq | MKNGTLDDHLHGAPSSPVTTSWRTRVEILLGVSRAVEHLQSSSSDGERRRPVIHCDIKPSNILLDDAWAPRLTDFGLSLTWDERECSSELPVVGTCGYAAPEYVATGCIRPASDVYGLGVVMLEVLTGRKALSQRAVVLNDGCTRFAHESLVELALPMIRLLDKRLTPTPTRRQLRAADMVARTAARCLLHDWVKRPAISEVVVDLKAALELVRFDVCGAGWGRRRRWRSWSAQTVAQLVGADVGRLISMIMQAALPAQRNKKECEQLARRVFMIAELLPHLQDPEVMRRPEVRRSLAGLGDTLRR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0402900 | OsMH63_11T0402900-mRNA-2 | Chr11 | 30388932 | 30390819 | + | maker | ||
| CDS seq | ACTCCTGTTTGTGTCGCCTTCTTCCAATTTCCAACCTTTTCCTCGGTCAGACAAAACTGCTTGACATCGTTCTCGTCGTACACTATCCCAATAATCCACCTTCCAGTGATTTTCCTCACCTTACCATTCGTTTGCTCTTCTTGGCACCAAGCAACAAGTAGACAGGTTAATCCTTGCGAGTTTGGAGATCGCCACGGCGAGATCATGTGGAGCGGGCTGGGGCAGGCGGCGACGGTGGTGCAGCTGGTCGGGGCGGATGTCGGCAGCCTCATCTCCGTCATCATGCAGGCGGCGATGACGGCTCGACAGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGCGTCTTCATGATCGCCGAGCTGCTGCCGCACCTGCAGGATCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGCCGCTCGCCGGGCTCGACGACGCGCTCCGGGAGGCGCACGAGCTCGTGACATCGTGCCAGGGAAGGGCCGCGGCCTACCGGTTGGTGACGGCATGGCGGCAGGCCGAGAGGTTCAGAGAAGTTCAGAGCAAGATCGACTCGTACCTCCTCGTCTTCCCCTTCATCAGCCACATCGACATCACCCGCCGCCTCGATCGAATCTACAGAGTTCTTCTTCCAAACGACGCGATCGTGCCATCCGCATCTGCAGGACTCCCGAATCATGAGATGATACTACAAATTTTAAGCAATTTTATAGTTCTTGAGGAGGAAGGTGAGAGATTCACCATGGCAGAGCTCGCTGCGGCGACCAATAACTTTGCAACTGACAGACAGATCGGTACAAACCCAGTAGCCAGGGTGTACAAGGGATGGCTTGCCGACGGGCGGGAGGTGGCCGTCAAGCAGCTGGTAGGCAACAGCAACCTATCTCTGGCAGTCGAGGAGGAGTTCCAGGCAGAGCTCTCGCTCCTCTCGATCCGCCACAGCCACATCGTCCGCCTCCTGGGCTGA
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| Protein seq | TPVCVAFFQFPTFSSVRQNCLTSFSSYTIPIIHLPVIFLTLPFVCSSWHQATSRQVNPCEFGDRHGEIMWSGLGQAATVVQLVGADVGSLISVIMQAAMTARQNKKECEQLARRVFMIAELLPHLQDPEVMRRPEVRRPLAGLDDALREAHELVTSCQGRAAAYRLVTAWRQAERFREVQSKIDSYLLVFPFISHIDITRRLDRIYRVLLPNDAIVPSASAGLPNHEMILQILSNFIVLEEEGERFTMAELAAATNNFATDRQIGTNPVARVYKGWLADGREVAVKQLVGNSNLSLAVEEEFQAELSLLSIRHSHIVRLLG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.219313 | 7.317272 | 0.559177 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0667000 | SBH | 0.0 | 0.143646 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44500 | SBH | 0.0 | 0.096614 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0667000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023020 | SBH | 0.0 | 1.673250 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023080 | RBH | 0.0 | 0.0 | 0.129481 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022420 | SBH | 0.0 | 0.020354 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022670 | SBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0401400 | RBH | 0.07676 | 14.955124 | 0.1836165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023590 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0422800 | RBH | 0.1928365 | 6.9440795 | 0.014992 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023110 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023340 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022930 | RBH | 4.118145 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022650 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022880 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023190 | SBH | 0.0 | 0.0 | 0.0 |
