Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0400500 | OGI:11063750 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:30249409-30252957 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTCTTCGTTAAGTTTTTGTTTGGTGGGTTGGAATGTAAGGGGGCTGAACAATCCTGATAAAAGGACCTTGGTTCGGGAGGCGGTGTTGTCTTGTGGTGCGTCAATTGTTTGTTTTCAAGAATCCAAACTTGAAGTAGTAGATGCTGCTATTATTTACGAGTTATGTGGCACTGGTTTTGATAGTTTTGCGGCTTTGCCGGCTGAAGAAACTAGAGGTGGGGTGATCATTGCATGGAAGGGGGAACATTTCCAAGGTTCTCTATTGCATCAAGGGAGATGGTCAGTGTCAATATCTCTAAATTGGATCTTAGGAGGAAGATCCTGGACACTTACATCTGTCTACGGACCACAGCTGGACGATGAAAAGCTGCTCTTCCTTGATGAACTATCTGCAGTTGCTGCAGTAGCAGGTGATCAATGGATGATTACTGGGGATTTTAATCTGATTGCTGCAGCGGCTAACAAAAGCAACACTAAAATCAACAGAAGGCTGATGAATGCATTCCGGAGCAAACTAAACGAGCTTGAACTCAAGGAGCTGTATCTCTTTGGCCGCCGATATACATGGAGCAATGAGCAGCAACGCCCGACGTTCGTGAAGCTTGACAGACTATTTGTCACCACAACTTGGGAGGTAAGCTTCCCAGAAGCACATCTGCAGGCCTTGAGCACCTCAGGCTCTGACCATTGTCCGCTGCTGCTGACGTGTGGTGATCCGGGCCCAAAGAAGAGAAAATTCAGATTTGAAACTTACTGGACCAAAATTGAAGGGTTCATGGACATTATCAGAGAAAGTTGGGAACAGCAAGTAGATGCAGAGGATCCTTATGCAATTCTCTATGTCAAGATGGCTAGACTTAGTAAAAAGCTTTCTCAATGGGGGCAAAAGAAAATCAGCTACTTCAGGCTACAAATTCAAATTGCAAATGAAGTTATTCTGAGGTTAGATGTGGCACAAGAAAGTAGGTTGCTGACCGACCTTGAACGCCGACTGAGGGCTGCCTTGAAGGGGAAATGTCTCGCCTTGGCCTCTCTTGAAAGAATAAGAGTGAGACAAAGAGCAAGAATTCGAAACCTCAAGGAGGGTGATGCTGGCACTGCCTACTTTTACATGAAGTTGAGGACAAGAAGAAGGAAGGCTTTAATACCAAGGCTTGAGCACAATGGCAAAGTGGCCACGACACAAACTGGCATGCAACAGTTAGCTCGCGAATACTTTGAAACAATCATGGGGCAGGCAGAAGGTGATTCAAAGCAATTTAACTTGCAGTCCATTCAGATGGCTAAAGGAAACTTGGCATCCTTTGATGAGAGCTTCACTGAAGAAGAGGTCTGGGCAGCAATCAAAAATCTGCCAACTGAGAAGTCGCCAGGCCCTGATGGATATACTTCGCTCTTCTACCAAAAATGCTGGGCTGTAATCAAGGATGACCTTATGGCGGCCATGGGGAAATTCTGCACTGGAAATAGCCAAAATCTTGAATTGTTGAATTCAGCACAAATCACACTCATTCCGAAGAAAGAAGCGCCAACCATGTTGAAGGACTATCGGCCAATTAGTCTCATTCATAGCTTCTCCAAATTGGCAACAAAAGTAATGGCACGGCGGCTGGCAACAAGGTTGGATGATCTGGTACCCCACACACAAACGGCATTCATCAAAGGCAGATCCATACATGAAAATTTCATATTTGTCAAAGGTATGGCTCAACAGTTCCACCGGCAAAAAAAGGAAGTTTTACTCCTGAAGCTTGACATCTCGAAGGCTTTTGATATGGTTTCATGGAGCTTTCTGCTGAACATGCTGAAATACAGAGGGTTTGGCCCGCGCTGGAGGTCTTGGCTTGCTGCACTTTTCTTGACAGCACAAACAAGCATTACAGTAAATGGGGATGACTCAAGGGCAATCAAACCAGCAAGGGGACTGCGGCAAGGAGATCCTCTGTCGCCTCTTCTCTTCGTCTTGGTCATGGACACACTTCAAGCAACTCTTTTACAGGCAAAGAGGCAAGGAATACTTTCAGAACTGAACACCAGAAAACGTCTGCCAAACATTTCAGCTTATGCCGATGATGCAATGCTTTTCGTCAAGCCTCAGAGGAAAGAAGTGCTCCTGATCAAAGCAGTCCTAGACCTGTTTGGAGCAGCATCAGGTCTGAAAGTCAACCTCCTGAAAAGCTCCATCACGCCTATACACTGCAACCAACAACAATTAGATATGGTCTCTGAACTGCTCCCATGTAAAGTCGAGGAATTTCCCATTATCTACCTGGGACTGCCACTATCTATGCGAAAACCAACCAAGGCAGAGCTACAACCAGTCCTAGACAAGTTAGCAAGCAAGGTTGCAGGTTGGAAGCCAAAATTACTGTCACCTGATGGTCGACTTTGCTTAATCAAGAGTGTTCTGATGGCATTACCTGTGCACTTCCTATCAGTGCTGCAAATGCCGAAATGGGCGGTGAAAGAAATTGAACGCAAATGCAGAGGATTCTTATGGAAGGGACAAGAGGATGTAAGTGGAGGACACTGTCTAGTGGCCTGGAAAAATGTTTGTGCACCAGTACAGAATGGGGGATTGGGAATTCGAAATCTCGACGCCTTTGGTCAAGCGCTAAGACTAAAATGGTTAGCCAAAAGTCTTGAGCAGAAAAATCGACCGTGGGCCAAGTCAGGATATAAACTTGGAGAAGACGTGGAGAAAATCTTTAACTCAGCTGCTGAATTCTGTGTTGGAAACGGCAAAGACACAAAGTTTTGGACAGCCAATTGGCTAAATGGTGGAAGCATTGCTTGGCGATGGCCGGTACTGTCCACTTATGTTGGCCGCTCACAGCTGACAGTGGCACAAGCTTTAACCAACAACAGATGGGTCAGAGATCTGCAAGGTGCACTCTCCAATGAAGCCATGGCACAATTCTTCCAGCTCTGGGATGAAGTACACACTGTCGAGCTAAATCTAGAGGAAGACACCATCCGCTGGAAGCTTTCCTCCGACGGACTTTTCACTGTATCTTCAGCCTATAACCTTTTCTTCATGGCAAGAGAGATCTGCCCTTTCAGCGAACTTATTTGGCACATCAAAGCTCCATCCCGAGTGCGCTTCTTCCTATGGTTGGCTGCCAAAGGTCGCTGCCTAACAGCTGACAACCTGGGCAAGAGAGGATGGCAGCATGAAGATTGCTGCTCCCTCTGTCAGAGTGAAGCAGAGGACTGCCTACATCTGTTCGTAACGTGCGCTTTCACCAGGAGAGTATGGAGGATGATGCAGGGATGGATTGGAATCAATTTCCTCTTGCCTACAGAGAACGAACCAGCCCTGGCAGATTGGTGGATGAAGGCGAGGATGGCTTTTCGGACGGGCTACAGGAGCATCTTCGACAGTGTTTTCGCGCTAACATGTTGGCTGCTGTGGAAAGAACGCAATGCGCGTGTCTTTGAACAGAAATTTCGAAGCATAGAACAGCTTGTGCAAGATATCAAGGAAGAGGCCATTGTCTGGAAGACGACAGGAGTGTTCACAACGTGCAATAGCGAGATCACGTAA
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| CDS seq | ATGTCTTCGTTAAGTTTTTGTTTGGTGGGTTGGAATGTAAGGGGGCTGAACAATCCTGATAAAAGGACCTTGGTTCGGGAGGCGGTGTTGTCTTGTGGTGCGTCAATTGTTTGTTTTCAAGAATCCAAACTTGAAGTAGTAGATGCTGCTATTATTTACGAGTTATGTGGCACTGGTTTTGATAGTTTTGCGGCTTTGCCGGCTGAAGAAACTAGAGGTGGGGTGATCATTGCATGGAAGGGGGAACATTTCCAAGGTTCTCTATTGCATCAAGGGAGATGGTCAGTGTCAATATCTCTAAATTGGATCTTAGGAGGAAGATCCTGGACACTTACATCTGTCTACGGACCACAGCTGGACGATGAAAAGCTGCTCTTCCTTGATGAACTATCTGCAGTTGCTGCAGTAGCAGGTGATCAATGGATGATTACTGGGGATTTTAATCTGATTGCTGCAGCGGCTAACAAAAGCAACACTAAAATCAACAGAAGGCTGATGAATGCATTCCGGAGCAAACTAAACGAGCTTGAACTCAAGGAGCTGTATCTCTTTGGCCGCCGATATACATGGAGCAATGAGCAGCAACGCCCGACGTTCGTGAAGCTTGACAGACTATTTGTCACCACAACTTGGGAGGTAAGCTTCCCAGAAGCACATCTGCAGGCCTTGAGCACCTCAGGCTCTGACCATTGTCCGCTGCTGCTGACGTGTGGTGATCCGGGCCCAAAGAAGAGAAAATTCAGATTTGAAACTTACTGGACCAAAATTGAAGGGTTCATGGACATTATCAGAGAAAGTTGGGAACAGCAAGTAGATGCAGAGGATCCTTATGCAATTCTCTATGTCAAGATGGCTAGACTTAGTAAAAAGCTTTCTCAATGGGGGCAAAAGAAAATCAGCTACTTCAGGCTACAAATTCAAATTGCAAATGAAGTTATTCTGAGGTTAGATGTGGCACAAGAAAGTAGGTTGCTGACCGACCTTGAACGCCGACTGAGGGCTGCCTTGAAGGGGAAATGTCTCGCCTTGGCCTCTCTTGAAAGAATAAGAGTGAGACAAAGAGCAAGAATTCGAAACCTCAAGGAGGGTGATGCTGGCACTGCCTACTTTTACATGAAGTTGAGGACAAGAAGAAGGAAGGCTTTAATACCAAGGCTTGAGCACAATGGCAAAGTGGCCACGACACAAACTGGCATGCAACAGTTAGCTCGCGAATACTTTGAAACAATCATGGGGCAGGCAGAAGGTGATTCAAAGCAATTTAACTTGCAGTCCATTCAGATGGCTAAAGGAAACTTGGCATCCTTTGATGAGAGCTTCACTGAAGAAGAGGTCTGGGCAGCAATCAAAAATCTGCCAACTGAGAAGTCGCCAGGCCCTGATGGATATACTTCGCTCTTCTACCAAAAATGCTGGGCTGTAATCAAGGATGACCTTATGGCGGCCATGGGGAAATTCTGCACTGGAAATAGCCAAAATCTTGAATTGTTGAATTCAGCACAAATCACACTCATTCCGAAGAAAGAAGCGCCAACCATGTTGAAGGACTATCGGCCAATTAGTCTCATTCATAGCTTCTCCAAATTGGCAACAAAAGTAATGGCACGGCGGCTGGCAACAAGGTTGGATGATCTGGTACCCCACACACAAACGGCATTCATCAAAGGCAGATCCATACATGAAAATTTCATATTTGTCAAAGGTATGGCTCAACAGTTCCACCGGCAAAAAAAGGAAGTTTTACTCCTGAAGCTTGACATCTCGAAGGCTTTTGATATGGTTTCATGGAGCTTTCTGCTGAACATGCTGAAATACAGAGGGTTTGGCCCGCGCTGGAGGTCTTGGCTTGCTGCACTTTTCTTGACAGCACAAACAAGCATTACAGTAAATGGGGATGACTCAAGGGCAATCAAACCAGCAAGGGGACTGCGGCAAGGAGATCCTCTGTCGCCTCTTCTCTTCGTCTTGGTCATGGACACACTTCAAGCAACTCTTTTACAGGCAAAGAGGCAAGGAATACTTTCAGAACTGAACACCAGAAAACGTCTGCCAAACATTTCAGCTTATGCCGATGATGCAATGCTTTTCGTCAAGCCTCAGAGGAAAGAAGTGCTCCTGATCAAAGCAGTCCTAGACCTGTTTGGAGCAGCATCAGGTCTGAAAGTCAACCTCCTGAAAAGCTCCATCACGCCTATACACTGCAACCAACAACAATTAGATATGGTCTCTGAACTGCTCCCATGTAAAGTCGAGGAATTTCCCATTATCTACCTGGGACTGCCACTATCTATGCGAAAACCAACCAAGGCAGAGCTACAACCAGTCCTAGACAAGTTAGCAAGCAAGGTTGCAGGTTGGAAGCCAAAATTACTGTCACCTGATGGTCGACTTTGCTTAATCAAGAGTGTTCTGATGGCATTACCTGTGCACTTCCTATCAGTGCTGCAAATGCCGAAATGGGCGGTGAAAGAAATTGAACGCAAATGCAGAGGATTCTTATGGAAGGGACAAGAGGATGTAAGTGGAGGACACTGTCTAGTGGCCTGGAAAAATGTTTGTGCACCAGTACAGAATGGGGGATTGGGAATTCGAAATCTCGACGCCTTTGGTCAAGCGCTAAGACTAAAATGGTTAGCCAAAAGTCTTGAGCAGAAAAATCGACCGTGGGCCAAGTCAGGATATAAACTTGGAGAAGACGTGGAGAAAATCTTTAACTCAGCTGCTGAATTCTGTGTTGGAAACGGCAAAGACACAAAGTTTTGGACAGCCAATTGGCTAAATGGTGGAAGCATTGCTTGGCGATGGCCGGTACTGTCCACTTATGTTGGCCGCTCACAGCTGACAGTGGCACAAGCTTTAACCAACAACAGATGGGTCAGAGATCTGCAAGGTGCACTCTCCAATGAAGCCATGGCACAATTCTTCCAGCTCTGGGATGAAGTACACACTGTCGAGCTAAATCTAGAGGAAGACACCATCCGCTGGAAGCTTTCCTCCGACGGACTTTTCACTGTATCTTCAGCCTATAACCTTTTCTTCATGGCAAGAGAGATCTGCCCTTTCAGCGAACTTATTTGGCACATCAAAGCTCCATCCCGAGTGCGCTTCTTCCTATGGTTGGCTGCCAAAGGTCGCTGCCTAACAGCTGACAACCTGGGCAAGAGAGGATGGCAGCATGAAGATTGCTGCTCCCTCTGTCAGAGTGAAGCAGAGGACTGCCTACATCTGTTCGTAACGTGCGCTTTCACCAGGAGAGTATGGAGGATGATGCAGGGATGGATTGGAATCAATTTCCTCTTGCCTACAGAGAACGAACCAGCCCTGGCAGATTGGTGGATGAAGGCGAGGATGGCTTTTCGGACGGGCTACAGGAGCATCTTCGACAGTGTTTTCGCGCTAACATGTTGGCTGCTGTGGAAAGAACGCAATGCGCGTGTCTTTGAACAGAAATTTCGAAGCATAGAACAGCTTGTGCAAGATATCAAGGAAGAGGCCATTGTCTGGAAGACGACAGGAGTGTTCACAACGTGCAATAGCGAGATCACGTAA
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| Protein seq | MSSLSFCLVGWNVRGLNNPDKRTLVREAVLSCGASIVCFQESKLEVVDAAIIYELCGTGFDSFAALPAEETRGGVIIAWKGEHFQGSLLHQGRWSVSISLNWILGGRSWTLTSVYGPQLDDEKLLFLDELSAVAAVAGDQWMITGDFNLIAAAANKSNTKINRRLMNAFRSKLNELELKELYLFGRRYTWSNEQQRPTFVKLDRLFVTTTWEVSFPEAHLQALSTSGSDHCPLLLTCGDPGPKKRKFRFETYWTKIEGFMDIIRESWEQQVDAEDPYAILYVKMARLSKKLSQWGQKKISYFRLQIQIANEVILRLDVAQESRLLTDLERRLRAALKGKCLALASLERIRVRQRARIRNLKEGDAGTAYFYMKLRTRRRKALIPRLEHNGKVATTQTGMQQLAREYFETIMGQAEGDSKQFNLQSIQMAKGNLASFDESFTEEEVWAAIKNLPTEKSPGPDGYTSLFYQKCWAVIKDDLMAAMGKFCTGNSQNLELLNSAQITLIPKKEAPTMLKDYRPISLIHSFSKLATKVMARRLATRLDDLVPHTQTAFIKGRSIHENFIFVKGMAQQFHRQKKEVLLLKLDISKAFDMVSWSFLLNMLKYRGFGPRWRSWLAALFLTAQTSITVNGDDSRAIKPARGLRQGDPLSPLLFVLVMDTLQATLLQAKRQGILSELNTRKRLPNISAYADDAMLFVKPQRKEVLLIKAVLDLFGAASGLKVNLLKSSITPIHCNQQQLDMVSELLPCKVEEFPIIYLGLPLSMRKPTKAELQPVLDKLASKVAGWKPKLLSPDGRLCLIKSVLMALPVHFLSVLQMPKWAVKEIERKCRGFLWKGQEDVSGGHCLVAWKNVCAPVQNGGLGIRNLDAFGQALRLKWLAKSLEQKNRPWAKSGYKLGEDVEKIFNSAAEFCVGNGKDTKFWTANWLNGGSIAWRWPVLSTYVGRSQLTVAQALTNNRWVRDLQGALSNEAMAQFFQLWDEVHTVELNLEEDTIRWKLSSDGLFTVSSAYNLFFMAREICPFSELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAEDCLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFALTCWLLWKERNARVFEQKFRSIEQLVQDIKEEAIVWKTTGVFTTCNSEIT |
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| Function | LINE-1 reverse transcriptase homolog [UniProtKB/Swiss-Prot:P08548] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0400500 | OsMH63_11T0400500.1 | Chr11 | 30249409 | 30252957 | + | maker | ||
| CDS seq | ATGTCTTCGTTAAGTTTTTGTTTGGTGGGTTGGAATGTAAGGGGGCTGAACAATCCTGATAAAAGGACCTTGGTTCGGGAGGCGGTGTTGTCTTGTGGTGCGTCAATTGTTTGTTTTCAAGAATCCAAACTTGAAGTAGTAGATGCTGCTATTATTTACGAGTTATGTGGCACTGGTTTTGATAGTTTTGCGGCTTTGCCGGCTGAAGAAACTAGAGGTGGGGTGATCATTGCATGGAAGGGGGAACATTTCCAAGGTTCTCTATTGCATCAAGGGAGATGGTCAGTGTCAATATCTCTAAATTGGATCTTAGGAGGAAGATCCTGGACACTTACATCTGTCTACGGACCACAGCTGGACGATGAAAAGCTGCTCTTCCTTGATGAACTATCTGCAGTTGCTGCAGTAGCAGGTGATCAATGGATGATTACTGGGGATTTTAATCTGATTGCTGCAGCGGCTAACAAAAGCAACACTAAAATCAACAGAAGGCTGATGAATGCATTCCGGAGCAAACTAAACGAGCTTGAACTCAAGGAGCTGTATCTCTTTGGCCGCCGATATACATGGAGCAATGAGCAGCAACGCCCGACGTTCGTGAAGCTTGACAGACTATTTGTCACCACAACTTGGGAGGTAAGCTTCCCAGAAGCACATCTGCAGGCCTTGAGCACCTCAGGCTCTGACCATTGTCCGCTGCTGCTGACGTGTGGTGATCCGGGCCCAAAGAAGAGAAAATTCAGATTTGAAACTTACTGGACCAAAATTGAAGGGTTCATGGACATTATCAGAGAAAGTTGGGAACAGCAAGTAGATGCAGAGGATCCTTATGCAATTCTCTATGTCAAGATGGCTAGACTTAGTAAAAAGCTTTCTCAATGGGGGCAAAAGAAAATCAGCTACTTCAGGCTACAAATTCAAATTGCAAATGAAGTTATTCTGAGGTTAGATGTGGCACAAGAAAGTAGGTTGCTGACCGACCTTGAACGCCGACTGAGGGCTGCCTTGAAGGGGAAATGTCTCGCCTTGGCCTCTCTTGAAAGAATAAGAGTGAGACAAAGAGCAAGAATTCGAAACCTCAAGGAGGGTGATGCTGGCACTGCCTACTTTTACATGAAGTTGAGGACAAGAAGAAGGAAGGCTTTAATACCAAGGCTTGAGCACAATGGCAAAGTGGCCACGACACAAACTGGCATGCAACAGTTAGCTCGCGAATACTTTGAAACAATCATGGGGCAGGCAGAAGGTGATTCAAAGCAATTTAACTTGCAGTCCATTCAGATGGCTAAAGGAAACTTGGCATCCTTTGATGAGAGCTTCACTGAAGAAGAGGTCTGGGCAGCAATCAAAAATCTGCCAACTGAGAAGTCGCCAGGCCCTGATGGATATACTTCGCTCTTCTACCAAAAATGCTGGGCTGTAATCAAGGATGACCTTATGGCGGCCATGGGGAAATTCTGCACTGGAAATAGCCAAAATCTTGAATTGTTGAATTCAGCACAAATCACACTCATTCCGAAGAAAGAAGCGCCAACCATGTTGAAGGACTATCGGCCAATTAGTCTCATTCATAGCTTCTCCAAATTGGCAACAAAAGTAATGGCACGGCGGCTGGCAACAAGGTTGGATGATCTGGTACCCCACACACAAACGGCATTCATCAAAGGCAGATCCATACATGAAAATTTCATATTTGTCAAAGGTATGGCTCAACAGTTCCACCGGCAAAAAAAGGAAGTTTTACTCCTGAAGCTTGACATCTCGAAGGCTTTTGATATGGTTTCATGGAGCTTTCTGCTGAACATGCTGAAATACAGAGGGTTTGGCCCGCGCTGGAGGTCTTGGCTTGCTGCACTTTTCTTGACAGCACAAACAAGCATTACAGTAAATGGGGATGACTCAAGGGCAATCAAACCAGCAAGGGGACTGCGGCAAGGAGATCCTCTGTCGCCTCTTCTCTTCGTCTTGGTCATGGACACACTTCAAGCAACTCTTTTACAGGCAAAGAGGCAAGGAATACTTTCAGAACTGAACACCAGAAAACGTCTGCCAAACATTTCAGCTTATGCCGATGATGCAATGCTTTTCGTCAAGCCTCAGAGGAAAGAAGTGCTCCTGATCAAAGCAGTCCTAGACCTGTTTGGAGCAGCATCAGGTCTGAAAGTCAACCTCCTGAAAAGCTCCATCACGCCTATACACTGCAACCAACAACAATTAGATATGGTCTCTGAACTGCTCCCATGTAAAGTCGAGGAATTTCCCATTATCTACCTGGGACTGCCACTATCTATGCGAAAACCAACCAAGGCAGAGCTACAACCAGTCCTAGACAAGTTAGCAAGCAAGGTTGCAGGTTGGAAGCCAAAATTACTGTCACCTGATGGTCGACTTTGCTTAATCAAGAGTGTTCTGATGGCATTACCTGTGCACTTCCTATCAGTGCTGCAAATGCCGAAATGGGCGGTGAAAGAAATTGAACGCAAATGCAGAGGATTCTTATGGAAGGGACAAGAGGATGTAAGTGGAGGACACTGTCTAGTGGCCTGGAAAAATGTTTGTGCACCAGTACAGAATGGGGGATTGGGAATTCGAAATCTCGACGCCTTTGGTCAAGCGCTAAGACTAAAATGGTTAGCCAAAAGTCTTGAGCAGAAAAATCGACCGTGGGCCAAGTCAGGATATAAACTTGGAGAAGACGTGGAGAAAATCTTTAACTCAGCTGCTGAATTCTGTGTTGGAAACGGCAAAGACACAAAGTTTTGGACAGCCAATTGGCTAAATGGTGGAAGCATTGCTTGGCGATGGCCGGTACTGTCCACTTATGTTGGCCGCTCACAGCTGACAGTGGCACAAGCTTTAACCAACAACAGATGGGTCAGAGATCTGCAAGGTGCACTCTCCAATGAAGCCATGGCACAATTCTTCCAGCTCTGGGATGAAGTACACACTGTCGAGCTAAATCTAGAGGAAGACACCATCCGCTGGAAGCTTTCCTCCGACGGACTTTTCACTGTATCTTCAGCCTATAACCTTTTCTTCATGGCAAGAGAGATCTGCCCTTTCAGCGAACTTATTTGGCACATCAAAGCTCCATCCCGAGTGCGCTTCTTCCTATGGTTGGCTGCCAAAGGTCGCTGCCTAACAGCTGACAACCTGGGCAAGAGAGGATGGCAGCATGAAGATTGCTGCTCCCTCTGTCAGAGTGAAGCAGAGGACTGCCTACATCTGTTCGTAACGTGCGCTTTCACCAGGAGAGTATGGAGGATGATGCAGGGATGGATTGGAATCAATTTCCTCTTGCCTACAGAGAACGAACCAGCCCTGGCAGATTGGTGGATGAAGGCGAGGATGGCTTTTCGGACGGGCTACAGGAGCATCTTCGACAGTGTTTTCGCGCTAACATGTTGGCTGCTGTGGAAAGAACGCAATGCGCGTGTCTTTGAACAGAAATTTCGAAGCATAGAACAGCTTGTGCAAGATATCAAGGAAGAGGCCATTGTCTGGAAGACGACAGGAGTGTTCACAACGTGCAATAGCGAGATCACGTAA
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| Protein seq | MSSLSFCLVGWNVRGLNNPDKRTLVREAVLSCGASIVCFQESKLEVVDAAIIYELCGTGFDSFAALPAEETRGGVIIAWKGEHFQGSLLHQGRWSVSISLNWILGGRSWTLTSVYGPQLDDEKLLFLDELSAVAAVAGDQWMITGDFNLIAAAANKSNTKINRRLMNAFRSKLNELELKELYLFGRRYTWSNEQQRPTFVKLDRLFVTTTWEVSFPEAHLQALSTSGSDHCPLLLTCGDPGPKKRKFRFETYWTKIEGFMDIIRESWEQQVDAEDPYAILYVKMARLSKKLSQWGQKKISYFRLQIQIANEVILRLDVAQESRLLTDLERRLRAALKGKCLALASLERIRVRQRARIRNLKEGDAGTAYFYMKLRTRRRKALIPRLEHNGKVATTQTGMQQLAREYFETIMGQAEGDSKQFNLQSIQMAKGNLASFDESFTEEEVWAAIKNLPTEKSPGPDGYTSLFYQKCWAVIKDDLMAAMGKFCTGNSQNLELLNSAQITLIPKKEAPTMLKDYRPISLIHSFSKLATKVMARRLATRLDDLVPHTQTAFIKGRSIHENFIFVKGMAQQFHRQKKEVLLLKLDISKAFDMVSWSFLLNMLKYRGFGPRWRSWLAALFLTAQTSITVNGDDSRAIKPARGLRQGDPLSPLLFVLVMDTLQATLLQAKRQGILSELNTRKRLPNISAYADDAMLFVKPQRKEVLLIKAVLDLFGAASGLKVNLLKSSITPIHCNQQQLDMVSELLPCKVEEFPIIYLGLPLSMRKPTKAELQPVLDKLASKVAGWKPKLLSPDGRLCLIKSVLMALPVHFLSVLQMPKWAVKEIERKCRGFLWKGQEDVSGGHCLVAWKNVCAPVQNGGLGIRNLDAFGQALRLKWLAKSLEQKNRPWAKSGYKLGEDVEKIFNSAAEFCVGNGKDTKFWTANWLNGGSIAWRWPVLSTYVGRSQLTVAQALTNNRWVRDLQGALSNEAMAQFFQLWDEVHTVELNLEEDTIRWKLSSDGLFTVSSAYNLFFMAREICPFSELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAEDCLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFALTCWLLWKERNARVFEQKFRSIEQLVQDIKEEAIVWKTTGVFTTCNSEIT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.009156 | 0.003357 | 0.0134605 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g43780 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0041620 | SBH | 0.255608 | 0.000000 | 0.427363 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023200 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0605100 | RBH | 0.5148635 | 3.4743585 | 3.763146 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0428400 | SBH | 0 | 0.036328 | 0.7333375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023330 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020320 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023020 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023430 | SBH | 0.0 | 0.0 | 0.0 |
