Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0248800 | OGI:11047000 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:18868532-18869960 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTATTGGGCTAAAATTGCCCCTACCTTGCCCACCGCGCATAAGGGCACTTGATTTGAGCCAGCATGTTGTGAGTCCAACTTAAACCCATTGTCTATCAAAGAACGATGTTGCTTCTCGCTCACAGCAAAGAAGTCCTTTGACCTCGAGTCAACAAACGGCATAAGAACGAGCTTGAGTTGGACTAACCTTACAAGCATAGTGGATGAGCTAGAACTGACTGATATGGCACTCTATGAATCCATGTCGGAAGAAATGGGTCCAATCAACTTCTCATACACGCGAAAGGGGAAATTTTCAGCCCAACAAATTTGAGTGGATGAGTTTTTTAGTGAAATAGATTGTGGTGTAGAACCATTTTTGTAATTTTGCAAAGTTTTAAAACATTCTAAAACAAACGAAGGAAAATCCACAAGGAAAAATTGAAACCACATCCACCATTCCTGGGAAACAAACCACGCAAAACTATGAAGAAACGATGGGGTCATGGTTTACAATTTCAGTGTAGTCAAAATTCGTTAAATTTTCAAACAATTTCATTAAGTTCTTAAATCATTTTGGCGAAATTTTTTTAAAAATTTTTCGAAATTTCGTTGCCACCGAAATCCCAAAATTTCGGCCCAAAACGAAATTGGAAACACTGACTGGAATCAACTCACCAGGTGATCGCAAGTATGGCGCCAGGTCTATGGTCGCGTTCGCCGGGAAGAACGGCTTGTCGGAGTACCTCATGAAGCAGCCGGCGTCCACGGCGCGGCCGTCGGAGTCCGGCGGGCACCCGTCGATGTTCCTCGCCGCCACCGCCAGGCACTGCTCGCACCCGCCCTCCCCGACCGTCTCCACGCACTGCGCCGCCGCGTACACGCCGCCGCGAGCGGCCGCCGCGGCGAGCCCCGGTGCGCGGGGCGCGGCGGCCGCGAGGTCACCGACGAGCCCACGCGCCGCGCCAGCGAAAGAGCCGTCGGCGACGGCGGTGCCGTTGCATACCTGCGTGTTCCCGGGGAGCGTGGCCGGGCCGTCGAAGAAGGCGGCGCTCTCGTACCTCACGACGCAGCCGTCGAGGATGGCGCGCCCGCCGTTGGCGGCGCCGCACCTGGCGCGGAGGCGCGACGCCGCGGCGTCGAAGCACGCGGCGCAGCTGCCCGTCCCCGCGACGTACGGGCGGCACTGCGCCATCGCGAACGCCGGCGCGGCGGCGCGCGGCTCGGCCGCCGTGGCGAAGCCACCACCGCCACCAGCCGACGACAGGTTGGCGCGGAGCACGGCGAAGGTGGCGTTGAGGGCGGCGAGGAAGGCGGCGGCCGGTGTCGCGTTGTACTGGCTGCACCCCAGGTTGAGCAGCGTGATCTGCGGGTCAGCGGCGGCCGGAACCCACGCCGAGGCAACCACCAGCAGCGCCACCGCAGACGGCGCGAGCAGGAGACGATCCAT
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| CDS seq | ATGGATCGTCTCCTGCTCGCGCCGTCTGCGGTGGCGCTGCTGGTGGTTGCCTCGGCGTGGGTTCCGGCCGCCGCTGACCCGCAGATCACGCTGCTCAACCTGGGGTGCAGCCAGTACAACGCGACACCGGCCGCCGCCTTCCTCGCCGCCCTCAACGCCACCTTCGCCGTGCTCCGCGCCAACCTGTCGTCGGCTGGTGGCGGTGGTGGCTTCGCCACGGCGGCCGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGCGCAGTGCCGCCCGTACGTCGCGGGGACGGGCAGCTGCGCCGCGTGCTTCGACGCCGCGGCGTCGCGCCTCCGCGCCAGGTGCGGCGCCGCCAACGGCGGGCGCGCCATCCTCGACGGCTGCGTCGTGAGGTACGAGAGCGCCGCCTTCTTCGACGGCCCGGCCACGCTCCCCGGGAACACGCAGGTATGCAACGGCACCGCCGTCGCCGACGGCTCTTTCGCTGGCGCGGCGCGTGGGCTCGTCGGTGACCTCGCGGCCGCCGCGCCCCGCGCACCGGGGCTCGCCGCGGCGGCCGCTCGCGGCGGCGTGTACGCGGCGGCGCAGTGCGTGGAGACGGTCGGGGAGGGCGGGTGCGAGCAGTGCCTGGCGGTGGCGGCGAGGAACATCGACGGGTGCCCGCCGGACTCCGACGGCCGCGCCGTGGACGCCGGCTGCTTCATGAGGTACTCCGACAAGCCGTTCTTCCCGGCGAACGCGACCATAGACCTGGCGCCATACTTGCGATCACCTGTCCAACTCAAGCTCGTTCTTATGCCGTTTGTTGACTCGAGGTCAAAGGACTTCTTTGCTGTGAGCGAGAAGCAACATCGTTCTTTGATAGACAATGGGTTTAAGTTGGACTCACAACATGCTGGCTCAAATCAAGTGCCCTTATGCGCGGTGGGCAAGGTAGGGGCAATTTTAGCCCAATAG
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| Protein seq | MDRLLLAPSAVALLVVASAWVPAAADPQITLLNLGCSQYNATPAAAFLAALNATFAVLRANLSSAGGGGGFATAAEPRAAAPAFAMAQCRPYVAGTGSCAACFDAAASRLRARCGAANGGRAILDGCVVRYESAAFFDGPATLPGNTQVCNGTAVADGSFAGAARGLVGDLAAAAPRAPGLAAAAARGGVYAAAQCVETVGEGGCEQCLAVAARNIDGCPPDSDGRAVDAGCFMRYSDKPFFPANATIDLAPYLRSPVQLKLVLMPFVDSRSKDFFAVSEKQHRSLIDNGFKLDSQHAGSNQVPLCAVGKVGAILAQ |
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| Function | Cysteine-rich receptor-like protein kinase 42 [UniProtKB/Swiss-Prot:Q9FNE1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0248800 | OsMH63_11T0248800.1 | Chr11 | 18868532 | 18869960 | - | maker | ||
| CDS seq | ATGGATCGTCTCCTGCTCGCGCCGTCTGCGGTGGCGCTGCTGGTGGTTGCCTCGGCGTGGGTTCCGGCCGCCGCTGACCCGCAGATCACGCTGCTCAACCTGGGGTGCAGCCAGTACAACGCGACACCGGCCGCCGCCTTCCTCGCCGCCCTCAACGCCACCTTCGCCGTGCTCCGCGCCAACCTGTCGTCGGCTGGTGGCGGTGGTGGCTTCGCCACGGCGGCCGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGCGCAGTGCCGCCCGTACGTCGCGGGGACGGGCAGCTGCGCCGCGTGCTTCGACGCCGCGGCGTCGCGCCTCCGCGCCAGGTGCGGCGCCGCCAACGGCGGGCGCGCCATCCTCGACGGCTGCGTCGTGAGGTACGAGAGCGCCGCCTTCTTCGACGGCCCGGCCACGCTCCCCGGGAACACGCAGGTATGCAACGGCACCGCCGTCGCCGACGGCTCTTTCGCTGGCGCGGCGCGTGGGCTCGTCGGTGACCTCGCGGCCGCCGCGCCCCGCGCACCGGGGCTCGCCGCGGCGGCCGCTCGCGGCGGCGTGTACGCGGCGGCGCAGTGCGTGGAGACGGTCGGGGAGGGCGGGTGCGAGCAGTGCCTGGCGGTGGCGGCGAGGAACATCGACGGGTGCCCGCCGGACTCCGACGGCCGCGCCGTGGACGCCGGCTGCTTCATGAGGTACTCCGACAAGCCGTTCTTCCCGGCGAACGCGACCATAGACCTGGCGCCATACTTGCGATCACCTGTCCAACTCAAGCTCGTTCTTATGCCGTTTGTTGACTCGAGGTCAAAGGACTTCTTTGCTGTGAGCGAGAAGCAACATCGTTCTTTGATAGACAATGGGTTTAAGTTGGACTCACAACATGCTGGCTCAAATCAAGTGCCCTTATGCGCGGTGGGCAAGGTAGGGGCAATTTTAGCCCAATAG
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| Protein seq | MDRLLLAPSAVALLVVASAWVPAAADPQITLLNLGCSQYNATPAAAFLAALNATFAVLRANLSSAGGGGGFATAAEPRAAAPAFAMAQCRPYVAGTGSCAACFDAAASRLRARCGAANGGRAILDGCVVRYESAAFFDGPATLPGNTQVCNGTAVADGSFAGAARGLVGDLAAAAPRAPGLAAAAARGGVYAAAQCVETVGEGGCEQCLAVAARNIDGCPPDSDGRAVDAGCFMRYSDKPFFPANATIDLAPYLRSPVQLKLVLMPFVDSRSKDFFAVSEKQHRSLIDNGFKLDSQHAGSNQVPLCAVGKVGAILAQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.6143375 | 9.700185 | 0.2389785 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0470500 | SBH | 0.0 | 0.118605 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g28104 | SBH | 0.0 | 0.072868 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0470500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0013620 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0013560 | RBH | 0.000000 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0013520 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0013290 | SBH | 0.031450 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0013550 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0264000 | SBH | 3.831233 | 18.659854 | 0.3127725 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0013660 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0013730 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0013360 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0013210 | RBH | 0.012564 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0013540 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G013360 | RBH | 0.000000 | 0.0 | 0.414537 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0013550 | RBH | 0.0 | 0.0 | 0.0 |
