Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0236700 | OGI:10045610 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:15830123-15836165 | ||||||||
| Gene Symbol | RLCK299, OsRLCK299 | ||||||||||
| DNA seq | ATTCAAAATTCCTAATATTTTGAGACGATCCATCATCATCTAAAGTAGATGATAAAAAGCAAACTAGAAATTTTAAAAATAAAAACAACCTTTTCGGCTTTTCCTACTACTAGCTCCCAAATCCACACTCCCATCCAGTGCGGAACTGCAAAAGCCAGCGGGCCCCACCTGCCAGCGACCCACCGGCCACCACCTCGCACTCTCCGTCTCCTCCGCTGCGCCCCCAACACGGCGCCTACTACTCCTACAACAGAAGACGAGCTCGCCTCGCCGCCGCCGCCATCGCCACCACCACCCGCAGCTCTCCTCGTCGCGTCGTCCCGCACCTCTCGATCTCCAACGACGCGGGGGCTTGCCGGCGCGGCGCGAGTTGACGACGACTCGCCGGCTGTAGCAGGCAGCAGCAGCAGTAGAGAGACGAGACAGGAGTGAGTGGTGATCGCCGCGGTTGGGTTTCTTGGATTGGGCTGTGGCTGGCGTTGGTCGGAGGAGCCAGGAGGAGGTTCCCTCTCGCTTTGCTCGCTCGCTCGTTCGTTCTTGGCTGGGTTTGGTTTGGTTTGGTTTGGTCTCGGTTCAGATCTTCTCTCCAAAGATTGGGATTCTGTTGGTAGGGGGGGGAGGGAAGCCATTTTCTTGTTTCGATGGACGCTCGGTAGATCGGTAGGTAGATGGGGAACTGCATGGACACCGCGGCGGCGGCGGCGGCGGCGCCGGATACCAACAACGCCGGTGAGTGATGCGCCCTCCTTCTTGGGGGTTGGTTGGGTTCCATTCCATTGTTGTGTGATTCGCTCCATACTTGTGAATTGAATGGCACAGACTTGGCTTCTTCTTGTTTCTATGTTTGCTATTGTTGAGTTTTGCTTCCCCTTTGGGTGGGTGCCCCCTCACTTTTGGCTCTCCCTTTTTTCCTTCCTAGTTTGGTTTGGTTGTCTATAGCATTTGGATTGTTATTGTTACATGGAAAAAGGGGTGAGAGTGGTGGGATTTCTAAATTTTTCTTTCTTTCTTTCCTACATTTCTAGAGTTTTGCTACTAGGGTTTAGTTACCTTGTTATTGATCTCAAGCCTCAGATGGTCTGGTTATGGCAAATGATACATATGCTTGGTATAATAATGATTGGATTTGGGGGGAAGTCTTGAAGTAATGTCTTGTTGTCGTAATAGTTATGAACCTTCTAACTTGTGTAGGAATATAAATCGTTTCCAATTAGCATTTGCTTTTCGAAAGGAGGTTTAATTTGTTCCTAGAGTAAGTATATTTGCGAGCTGATAGATACCGGATTTTGTGTTTACTGTTAGATGTTACACCTTCATACAGCCATTGCATATTGCTACCGCCTACCAGAGAGATGTTTTAAGTTTTGACACCTTAGGCTGAAGTATTTGCAAGAACGAAATCAGACATAATTGAACACACAATTGCATTGTGTTGCAACCAAGGTAATAAATACCGTTCTTAGTGTCCGCTATAGCGGTAGCTGACCTCTACCGCTAGCACTACAAGGTAGTGGATCAAATATAGCGTATTGGAATTTAGTGGCCGTTATAGCGCTTGGCAACCGTTATAGTAGTCTGCTATTGGCTTGTTGCGCTGCTATTGCTCTTAAATGATATTCTTCATGCATGGACAGGAGAACTTAATGCAGTGCGCCTTCTCTATATCTTACTTATTTTGTTATCTTATAATTTTTATGCTATGAAATGTATGAGTATCAAAGTATGTAACCTAAACTTATTTTAAGTGAAACTTGATGTTAGCATTCATATATAATCTAAAGTTATGGTTACTTTTTGAATTCCGCTATTGGAATTTAGTGCCTGCAATAGCAACCACTATCCACAATCAGCTACCCGTACACTAATCCGCTACCAACCCTCTATTTGCTAGTATTTATTACCTTGGTTACAAATAAATCGATTTATGCAACAGTTATCCTTATGCATATCTCTCTGTTTCTTGTCTGGAAAGCAGATCCATCAAAAGCTGCTAGCAAGACAACCTATTCATCTTACCCTTCAACTACAAAAAGCGGTTCATCTTGGACTGTACCTTCCTATAAGGATCGTAGCGACCTTCCTACTCCTAGGACAGAAGGAGAAATTTTATCATCGTCAAATTTAAAGGCATTCACACTGAGTGAACTCAAAAATGCAACAAAGAACTTTAAGCCCGACAGTCTCCTTGGGGAAGGAGGATTTGGCTATGTCTATAAAGGTTGGATCGATGAGCAAACTCTTGCTCCTGCAAGGCCAGGGAGTGGTATGGTTGTGGCCGTCAAAAAGTTAAAACCAGAAGGTTTTCAGGGTCACAAGGAGTGGCTGGTACGTCTGCTATAAACCAACTTTCTAGGTTTCTCTGAGGTGCTACAATGTTTCTTAATTGTGATTGATGTGCTGCAGACAGAGGTTGACTACCTTGGCCAACTTCACCATGAGAATCTTGTTAAACTCATTGGTTATTGTTCAGATGGTGATAACCGACTTCTGGTGTATGAGTACATGCCTAAAGGAAGCTTGGAGAATCATCTATTTAGGCGTATGCATTTAACTCTACCACACTATTTTCTAAATATATACGGGTTCAATATCTTAAATTTGGCAGCACATTAAATGGAATTTTCTGTTATTTTAGGTGGTGCAGATCCTTTATCCTGGGGAATAAGGCTCAAAGTTGCTATTGGGGCTGCTAGGGGTTTATCATTTTTGCACGATGCTGAAAATCAAGTTATATATCGTGATTTCAAGGCATCAAACATTCTCCTTGACTCGGTATACATGAAAATAGCTACTCATTCTTGTCCTTCGAAAGTTTGACCTTTTGCAAATGTTTTTACTTTAACTTTTGTTTCCTTTTTTCACCATTATAGGAGTTCAACGCAAAGCTTTCAGACTTTGGTCTGGCAAAAGCAGGCCCAACTGGGGATAGAACCCATGTTTCCACACAAGTCATGGGTACCCGAGGTTATGCAGCTCCAGAATATGTTGCAACAGGTCAGGAATGATCTTACTTTTGAGTTCATATAATTCACAAGTTGGTACAGATTTATTAAATGGCAGTCTGCTTACTACCCTTGATGTTGGTCACTTCTTCAAAATTATGTTCAATCAGCTAGAATTAGAGTAGTTTACAAAAAAGGAAAAGAAGCTAGAATTAGAGTGTTGTTAAACCACCTTGTTGGTGCTAAGCTTTTACTTTGGTGACATCTAAAATGTACAGTAGTTTTGAATTAACAAATCTTGTTTTGCCGTATCTATTTCACCAAATGACATGCTGACTGTTATTGTACTATGACCGATAGCAAATATTTGTGAAGATCCTTTATTTGAGTTATCATCATCTCATTGTCATATCTACTAATGTCATTTTCACACATCAAATCTTAATATTTATTTTAAATTTATTAGCAATCGAGGGATGGTTTAGAGCCAAGTGAATGCGTAGAAGATGAAGACATTTTCCCTTTCTTCTTCTGCCTTCTTTTTTTTTCCCTTCTTGCCTGCCCTAATCTATCTGGTGGCATACTCAATCTGCTCAAAGCAGAGCTGACCAACTGAGAAAACCAATTGACGGAAGACCTGCTGCGCTAGCCGACATAGATTGAAGGAGCAGCGAGCAGCAACTCCTGTGCGTGGCACCACGCGGGCGGTGGAAGCAGACGCCCATGCATGAAGGAGCAAAGTGCCAAGCAGCACCGTGCGAAGGAAAGCAGTGGGTCTGCATGCGGCGGAAGCAGGAGTCCGTGCAAAGAAAAGCGGCGGGGCCCCACGAGGAAAATCACCCGGTGAAGAAAAATCGTCAGGCGTTGAGAGAAGACAAGCAGCAAGGAGGAAAACTGGCGAAACCCTAGATCTAGGCTCTCATACCATGTTAGGAATATAGCTTGTATTGAATAATAGCCCCAAGGAGGCAATATATAGGAGTACAAGAGACCAAAATACGTAAAGAGATAAACTATATATGTAAATAAAAGACTATATTCCTTGACAGGCGGTAGTGCTTCCAGTTGAGAAGCCACCGGTCCTGGGTTCGAACCCAGGATTTGCACAGGGAAAAAAAAGGACTTCTCGTTGGCTATTCCGTATTAAATGTGTAATCACTACGGTTGCCTTCAGTAAAATGCATGTGACCCACATGCCCTGGGCACCCGGGTAGGCGGCCTTTGGGGCCTTTTCTCGACTGGGCCAGGAAGAGCTTCTTCTTATATTTATCACTGAGTTAAGATTTTGAGGTTTAACTCCACGCATTCTAATATGTCATTTTTGGAGTGTGGTAAAGCTGCAAGTTTCCATTTTCTTTTTTTTATTATTTTGGACAAACATTAGGGAAGTCTTATGTGCATAAAGGGATTCTTTTATGCTACTTGAAATCACTGCAAGCCTGCATTTTTATCTGGAATGTATGTTGTTTTCTTGTTTAATACTATTACAAAATTTGTGTTATCCTGAAAAATTAAGTTCTGCAAACAAAACCCTGAATTTTAAATATAAATTTCTTTATTTGCACTTCAAAAAGAATCTATATTGATTTTTGCCTTTAGTTTGGACATTTAAAATGATTTACAACTTTTGCATTATATTTGGTTCCTACTTCATAACAATAACAAGTAACTGGAAGATACAATTGTCTTTGCTTCAAGTACAAAACAGACTTTGTACACATTACTTGCTCTGAATTTTGTAAGTCTCAATGTTTTATTGAAAATTGGAAATAAAATTCTGGATATTTGATTTTTACCGTGCATGAATCTAGCAGAAAACATATGCTCCCTCCGTTTCTAAATATCTGACGCCGTTGACTTTTTTAAACATGTTTGACCATTCGTCTTATTTAAAAAAATAAGTAATTATTAATTCTTTTCCTATCATTTGATTCATTGTTAAATATACTTTCATGTATACATATAGTGTTTCATATTTCACAAAAAAAAATTAATAAGACAAACGGTCAAACATGTGCTAAAAAGTCAACGGTGTCAAACATTTAAAAACGGAGGGAGTATGATCTACTTGAAAAGAATAGTCATGCCATTAGGACTTGCTCTTGTTGGCTAATGTATCTGGTAGTGGTAGGAGATAGTATTATTGTTGGGGGGCACATGTCCTTCACCTCTTAGAGCGGTATGATGGGGCACTAATAAAATCCAATTGTAATTAACCGCTGAGGTCTTCAGTTTATAAATTCTGTTGCAATTGTTTCTCACAATGCTCAAATATGATCCAGGTCGCCTCTCTGTAAAGGCAGATGTCTATAGCTTTGGTGTTGTGCTGCTCGAGTTATTGACTGGGAGACGGGCCTTAGACAAATCGAAACCAGCATCAGAACAGAACCTGGTTGACTGGACAAGACCCTACTTGGGTGACAAGCGCAGGCTGTACCGCATCATGGACATGAAGCTGGGCGGACAGTACCCTAAGAAAGGCGCCCACGCTATCGCGACCATTGCCCTGCAGTGCATCCGCAGCGAAGCCAAGATGCGACCCCAGATGTCCGAGGTCCTGGAGAAGCTGCAGCAGCTGCAAGACCCCAAGTACAACGTGACCTCACCGCAGGTTGACACCCGGAGGAGATCATCGTCGGGTTCAGTTCCTAGGTCGCCGATGCGGATGCAGCCTTCGCCACGGCGCCTTTCCGCCTCGGCTTCCCCATTGCCGGCTGCAGGCTCCCCGCTGCTGGCTTGTAGGACTGCGCAAGTGCACTAGATGCACAGCCTAGGATAGTTTGGAACTTCGTGCTGTAGTTGTTTGTAACCTCTAGCTGTATATTTTGTTTTGATGTTGTGCCCAATCTGTAGTTCTTTGTTTTGTGAGGTTGGATACATCTGTTGCTGTTAGACTCCGATGTGTGTGTAACAGGGAACGTGATTCCGGCATTCTGACGCGATCATTATTTTTTTTTACTTGTTTCAATAGATAAATGGATTCTTAGATTTGTGCCGTTGTGCATGGTTTTTCCTAGCCTTTGTTGGTTTAACCAATTACCTGTAGTTTGAATATTTATGACATGTACAAATATTTCTGGTGACATGACATCCATGAAATT
More
|
||||||||||
| CDS seq | ATGGGGAACTGCATGGACACCGCGGCGGCGGCGGCGGCGGCGCCGGATACCAACAACGCCGGTTGGATCGATGAGCAAACTCTTGCTCCTGCAAGGCCAGGGAGTGGTATGGTTGTGGCCGTCAAAAAGTTAAAACCAGAAGGTTTTCAGGGTCACAAGGAGTGGCTGGAGTTCAACGCAAAGCTTTCAGACTTTGGTCTGGCAAAAGCAGGCCCAACTGGGGATAGAACCCATGTTTCCACACAAGTCATGGGTACCCGAGGTTATGCAGCTCCAGAATATGTTGCAACAGGTCAGGAATGA |
||||||||||
| Protein seq | MGNCMDTAAAAAAAPDTNNAGWIDEQTLAPARPGSGMVVAVKKLKPEGFQGHKEWLEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYVATGQE |
||||||||||
| Function | Probable serine/threonine-protein kinase PBL4 [UniProtKB/Swiss-Prot:Q5PP29] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0236700 | OsMH63_10T0236700-mRNA-1 | Chr10 | 15830123 | 15836165 | + | maker | ||
| CDS seq | ATGGGGAACTGCATGGACACCGCGGCGGCGGCGGCGGCGGCGCCGGATACCAACAACGCCGGTTGGATCGATGAGCAAACTCTTGCTCCTGCAAGGCCAGGGAGTGGTATGGTTGTGGCCGTCAAAAAGTTAAAACCAGAAGGTTTTCAGGGTCACAAGGAGTGGCTGGAGTTCAACGCAAAGCTTTCAGACTTTGGTCTGGCAAAAGCAGGCCCAACTGGGGATAGAACCCATGTTTCCACACAAGTCATGGGTACCCGAGGTTATGCAGCTCCAGAATATGTTGCAACAGGTCAGGAATGA
More
|
|||||||
| Protein seq | MGNCMDTAAAAAAAPDTNNAGWIDEQTLAPARPGSGMVVAVKKLKPEGFQGHKEWLEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYVATGQE |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.5853635 | 4.581347 | 6.549429 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0405100 | SBH | 0.723040 | 0.844639 | 5.095487 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g26520 | SBH | 0.340049 | 0.462109 | 1.027373 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0405100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0010060 | SBH | 0.129118 | 2.854501 | 6.126895 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0010150 | SBH | 0.122965 | 0.000000 | 1.746495 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0010020 | SBH | 0.817654 | 3.015502 | 7.039227 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0010380 | SBH | 0.136423 | 0.208418 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0010120 | SBH | 6.075679 | 14.814995 | 18.426510 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0060700 | RBH | 17.5947415 | 49.922617 | 31.122534 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0010150 | SBH | 0.160343 | 0.543091 | 0.431647 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0256500 | SBH | 7.9315245 | 7.861752 | 21.664259 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0009930 | SBH | 0.070992 | 0.116499 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0009910 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0010340 | SBH | 2.148278 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0009940 | SBH | 0.839901 | 0.0 | 0.992653 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0010420 | SBH | 0.471323 | 6.231182 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G010250 | SBH | 0.225447 | 6.640237 | 2.887827 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0010210 | SBH | 0.730111 | 0.000000 | 3.479594 |
