Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_08G0377800		OGI:08068460 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr08:25621180-25629356		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GTTTAAAACAAATTTAATTACCAGCAATTGCTTTCGGTCTGTGCCCACGCGTCATGAATAACAAAAAGAGTATAAACAAAAGCAGGACGGTGTTATGGCTAATAGCACCAAACTTGTAAAGCATCAAATGTAAATCGATCAAGCATACGCCACAAACATAAATCCAAGATTCCAATAGGCAATACGTGCACGCGAGCTAATAAATACCAAAATCATAGTAGTCTCGATAATATTAGCATCAATGAGCGAGGAAGAGGGTGAGAGGCAGGTAGTCAATATATGATGATGATATATACAAGGAAACATACCTAGAGGAACTGGCGTCTTTGGCTGACTGCTGGGGCCAGCTGATGTCGATGGTCAGGACAGAGAAGCACAACTCAACTGGACAACAGTCCTAATAATTAATAAATAAACAAATGGGTACATCTAAAATTCTGAAGAAAACAAACTTGGACCGCTTCTGTGCTTTTCTGCTTACCCTTCAAGGCGGCTCTCGAGGTTTGGACGGTTTCAATTCCTTGCCTTCTTCAATAAGCCTTTTCATCTTCTCCTTCCTCTGGCAACGCGAAAGACGCGGTATGATCTCTACTTCTATACCCAGGAGCAACCGTAGCCTCCGGTATGCGGACACCACCATTTCAGAGTAACACCGTATTCTCTGTTTCTCTATCTTACTGATAGAATTTTGGGTTTCATAGTATACGACTTTGGAGGAACGCAGGTGGCATGGTCGGCTAATTCTGGGCTGGCTGCAGGGTTCTTGAATGGACAAGATGTTCTCCTTCAGGTCCAGGTAGAGTAATTGTCTATTCCCAACTTTTCTTTTTCAAGTTCTGGAATCATTTTGTGAGTTTTTGACATCTCGGTTTTCATTGAGTGGAATTTCTGTTTAATTCCTTGTTTTTAGATTTACTGTTTTGATGATTTCCACCAATCCATGAATCAACATGAACAATGTTTTTGTTGACAGCGTCAGATCAACTTCCAATGGTGACAAAGCCTCCAATTCAATCACCGAGGCATCAGAGATGCAGGAGAAATTGAACAAGCTGCAGGAAGAGCTGAAGAATGAGAAAAAGGAGAAGGCGCGTGCTCTGGATGAGATAGCAGGGCTCAAGAAGAAAAAGAATGAGAATAAGGTGACAAGCAATGGAGGTGATGATAAGTTGGACCTTGTGCACAGATTAGAGCAGTTAGAAGGTGAACAGGAGGCAGCAAGGGATTCAGAGAAGAAACTGCTAGTGTCATTGGGGGCCCAAACGAAGCAGCTTGAACAAACCAAGGTATCTCTGGAGGAGGCCAAGCTTGAGATTGCTTCCCTCAAAGATAATAAAAAGAGCTCGGAAGCCTTCAGTGCACTGTCTTCTAATCCTAGCCAACCGGCTAGGAATCTCAGGAGAAGGGGAATAATGTCTTTCTCCTTTGCTGATCCTGGTGAGGTAGAGACGTGGTCATTACAGCGTGAACTCAAGTTGGCTGTCGAAGCTGAGGAGAAGTGCAAGAAGGCCATGGATGATTTGGCAATAGCTTTGAAGGAACAGACAACTGATGCCAGAGATGCAAAAGCGAAACTTTCATTAGCGCAATCTGAGTTGACTAATGCAAGAACTGAAATGGAGAACTCAAAGGCCTTGCTTAAAAACACAGAGGAGAAGCTCCAGGTAGCACTGGAAGAGGCAGCGCAACTGAAGTTTGAGTCAGATGAGTTAGCAGCAGCCTCAAAAGAGAAAGAGAGGGGACTGGTTGATTGCATCAAGATGTTTGAGGGGGATCTCATCAAAGCAAAGGAGGAGAATAATAAATTGATCGAATCACAAAGGGTGATCAGAGATGAGAATTCCAGGTTGAGAGAAATGTTGAAGCATGCAGTGTGTGAAGCTAATGTAGCAAAAGAATCTTTGGAGATTGCCAGGGCAGAGAATTCTCAGCTTAAAGAAGACATATCTGAGAAAGAGAATACCTTACAGAGCATCATACAAGACTATGAGTCCCTCAAGGTAAGCGAGTCTGCGGCACAAAGTAGTATTGGAGAATTAAAGGATATGATTGATGCTATGTTCAGTTCAGAGTCGACCAAAACCTCAGCAGAAGCATCACCCAGAGATACCAAGGGAAATGAGGTGTATTATGACCACGAAAGAACCCAGTTGGAGGATATCAGGAATCCTGCGCTGCACAAAAAGAGGACAGTTCTCAGAAAATTTGCTGACATAATGAAGAAAAGAAACTCTCAAAGTGCAATCTAACATCCTTAGACAGCAATCAAATACAACTTCAGATTATCTTTTGCTCTTCAAAGTCGTTCACAAGACAGTTGGAATGCTGAGAATTCAATCTGGCAAACTGAAATGATATGCCTTGACTAAACCTTGGCGTTGCATGTGTAAACCTATGAAGCATATGTGTATATAATACAGATGTTGGAATATGAAACCAGCATAGCTTTCAAATTCTCTTGGCTCTTTTTATACATTCTCTGCATTTTGGAATCCACTAGGTGTAAAGTCTTGATGTGGAAATCTTGAATTGTTTTGACTAGTGCAGAAATATTACAATATGCATTTTGAAGTCCTTGTTTTGTGATTCAAGTCTGTCCAAAGTTAAATTTCCAGATAACTGAAACACTTCTATTAATAAAATCGGTCAGATTATTATATTATATTATATTCAACCTACCCTTCTAAGGTACTAATGAATTGCATGTTTCTTTGTTTATGTAGCGTATAAAATCATAATGAACTTGTATTGTTCAAACTTGGAAATGAAATACAAGAGATTTCTCCGAAAATAGCACGCAGCTATTAAAATCTGATTTGTAAATAGCAGACTGGTTGAGTAAAGTTTTTTTCGCCGGGTCGGCCAAGATTCCGACCAATGTATATTAAGCAGACTGGTTGAGTAAAGTTGCTACATAACATAGCACTTTATCTCGGCCCCTCTAATTTTCAATATAAAAGTGACTTTCTCTTTGGGTAAACACAGGTAAGTGCCTAATAATTTATTTTTCCTGATGAAGGTTGTTCATGTATGCTTCATTTTATCTGCCATGAAATCATCCTTCATGGAGTATTGATTTTTTTTTTTTTGGAAAACATAGCTTTCTTTAGAAAAGAGGCCAGTGGCCCAGCTTTTAATTGAAAGCCATCCTTGAAAACGTAACTAACTCCGTTATATTAATATACCAAAGCAGAATGAACAGACTTCTTCCCTTTCTGTCCAACTAGGCCAAAGTAATATTGCAACAAGCAAACACATCCCGTCAAGATATTTATGGGGAACTACAGATAAGCCTGGTAATGGGCTAGCCAACCCATGGGTTGTACGGGTTGAAACACTAATGGGCTGAAAATGGTGTGTCTTGTATGGGTTATAGGAAGGAATAAGGGCAGGGTTGGGTTGGGCCATATAAAATGAGGGTTACGATGGGTTGGACACTGTAGCTCAGAATGGGGTTCAGCCCATGGGCAGTAAAAAAGGGTCTTCTTTGTGGGAGAACCCACAGCGGTAGGAGCTCGGTGACTGGATCGGCGGCCACTGCCCACCGCCGCCTTGCGCCGCATTCTCCCCCTCCGCCTCCGCCTCCTCCTCCCCCTCCCCGTCGCGATCCTCCGTCGCTGTCCCGGTCCCCGTCCGCGAGCGCCGACGCTCTGTCCTTCCCGTCCAGATCACGCCACCCCGTCCGCCGGCGCGTCGTACGCCTCCACCAGCTGTCGGTCCTCCGCCTCCCGGTCAAGATCCGGCACCGCGCCGCCGTCCTCCGTCGCCTCCGCCTCCTGTTCGAGATCCACAGCACCGCGCAACCCTTTCTCTGCAAGTCGGTTTCTGCAACCAAGGTTTGTTTTCTTTGCTACAGGCATTGCTATTTTTGTTCTTGGTTTCGGTGCAGCGGATTAGATTGCTCTGCTAACATCTGAATGAAGCAAATCTTGATCACATGTTGAAATTGTTAATCCAGCTAGGGATTGCTTGTTAGTTTGCCGATTCACAGTACAAACTTGTAAAAAGCTATTAGGATTAGATTAGACATTGAATATAATGTATAAGCTTGTATAGAGAGATCATAGGATTCTCTTAAATAAGAAGTATATGCAGAGGAACGAATATTGTTTCAAGGCATTGTTATTCTTGCTAGTCCCTCTTTGTGTCAAAAGCCTTCTTTGCCACTTTCAGTTGTACTACTGACACTGAAATGATTTTTTTAACGAATATCATGTTTTAGATTATTAGTTCTTTGTGATGATTATTCCGAGAAGTTAACTGTAACTCATATTGAATTTTAGGAATCTGTAATAGAGAAAATTCTGGGCATATAATGATTTGTACTTCTGCAACTTGTAATACATTAAGTTGTATATATCTTGGATTTTAAATAAACACACATATATAATCTGAAACTGTGTTGGTCGAACTAGCTGCTCTTCTGTTTGAGATTAACTGAAAGTTGGTAATTTAATTTATACTGTAATAAAACTTACTTGATGTCAACTAGTATAAATTTTCAATTTGTTTCTAAGTAATATACTTAGAGTTACATATCTATTCAGATGTAGCTTGATCTGCACTATATATTTATTGTTGCACCGGATTGTTCTGTCCTCAACATAGACCTAAACTGGTGATAAATGTTTTTAACCCCTGTGTTCAACTTGATTTTGCAACTTCTAATTCTGTTTGTAACTTGATAGACTATGAATTGGTGAATGATTAAGCAACTGGAAGGAGTAAAGCAATTCTGAATTTCCATTGCTTAAGTATAGGAACATGGATTATTGTACTGATGCCTCCTTCAATAGGTTCTAACTTCTAACCTCATTTTGTTTCTACAGGGAGATGGAAACATTGCACTGGACAAGCTGTGGCATAAGAGGAAGGCTGAGATTAAGCATCAATAGATCTTGCTAGTACTTTTGAATGAAAAAATTCTGATATGATTCATAGATGTTTATTAGTTTCAAGGCGTGCCTATTTGTGGCCTAATTTTGCTAAACTATTGTGTATGTCTTAAGAAAGTTCAGTCATATACTTAAACCTGGCTTAGTTTGTGGTAATCTCTATTTAACTTATCTGAAAATTATTTGTCTTACTCCCTATAGCTGTGCTATGCATGTATACAAAGCTTCATTTTCATGTATGTGCGAAGGCTCTACAGTTGTTGTATGGTTGACGTGCTGTCGTGCTGAGCCCAATGGGTTAGTCTCTTCATTGTTTATGGGTTGTCCAAGGGTTCACAAAGGGTTAGGGTTCAACAAGCACTGAGAAGGTTACAGGTTGGGGTTGGTCTGGGCTAAATATGCATGTTAGTGGGTTAGGGTGGGGTTTGGGTGCAATATATAAATAGAAATGGGCAGGGGTGGGGTTCGGGGTGGGCCACGACCCATTACCAGGCCTAACTACAGATTGATTATGTGGAACACCAACTTCGATCTGTATGAAACACGATAGCACTTTCCTTTGGGTCAATTGACCTGAAATCATCAGTTTTAGCCAACTGGCTGCAAAGCCTGTAAAGTCCTAAGTTAGGATCAATAAATGTAGCTGTTACCTCCAAAATATGCTCCTTCTCATGTCTAGTTTCAACCCTCCTTTTGCAAAGAGATATATCTTTGTCATCAAAGCAACATCCACTGTACTCGTTTGATTAAAATCCATTCTGGGAATTCATGTATCTCATATGAATAATCTATTCATAGAAATTTGATCCTAGAGCACAAAGCTGGAGATTCTGAGTACAGCAGAGCTTACTAAACTCGCACGAGAATTTGGATGATATAAAAAGCACTAACCACATTCTTGAACTAGCTCTTCCATCATCTGAGTTTTATCAGTGACCATCTGCATATGAAAGCTAATTTTTCTCAGCTCGGATAAGATCATGTCCATCTCAGGATGGGATGCATCACCACCAACAAACATATGAACTTTATCAGCAATCTCTGTCCAGCTATGTCCAGGTTGCTTCTTCACACCTTTTTCCTTCATTTGGCTCCTTACTCGATTGACTTCACCCCACATGCCAGCAGCAGCATATATGTTTGAAAGCATCACATAAGCCCCTGAACTTTCAAAGTCTGATAGGACAAGCATCTTAGCAGCAAGTTCACCCAACTGAACATTACCATGTGTCTGAGAAGCACAAAGTAGAGTGCCCCAAACATTCTTCTCAGCCTCAGAAGGCATTTCCTTTATGTAACTACATGCTTTCTCCAACTGTCCTGCTCGGCTCAATATATCCACAATACAAGCATAGTGTTCTGCTCTTGGAGATATTGCATATTTGGAAAACATAAGATCAAACAGTTTCAAGCTTTCATCCACTCTGCCAGCATGTCCACACGCTGATAACATGCTAAGGAAGGTAATATCATTCGGTATCAGTCCACACAGTTCCATCTCATGGAACAGAGCAATAACTTTCTGATATCTGCCATGTTGTGCATATGCGGCAATTATTGTGTTCCAAGAAACAATATCCTGGCTTTTGAGACTCATGAAGACTAACTCAGACTCGTCAACATTGCCACACTTGCTATACATTGTCATCAAAGCATTACAAATAGAAATGCTTGATTCTAACATAGCTTTGATGACAACAGCATGTGTTGATCTTCCTTGTCTGAGCAGAGCAAGAGAAGAACATGCTGTCAGTAGTGCAATAAGTGTTGCCTGATCTGGTTTGATACCTTCTCTAAGCATTATGATGTACAGTTTCGTTGCTTCTTCTCCAAGTCCATTATGAACATATCCTGCAGAAACATGGAAAGGCTAACTGCGAGAATTTTCAATGCAAAGATCTGCTTATTTATTGCATTATATTTGTTATAAAATCCCCTACCCATCCCTACCCCATTTTCTCGAACAGAAACTGAGATACAAGGGTTACAGTTACAGACGAGTTGAAGCTTGAAACACTATAATCCAATGAAACAAACCTTGCAATGTTCAACAGCTGACATGCCCACCTCACCGTACAATTTTGTACACTAGAGCCGAGCTTTTTTTTATCAGCGTAAAGGACCAAACTATTACCTTCTAGAGAAACCATATTTGTATGTTGGCCTGTGATGAGCAGGTTAAAGGGGATGAACTGAACTATTGAATAGCTCCTGGAAATTGGAAAAAACCAGAACCTGGATAGTTTTCTGAACCTTTACTAAAATGGCAGTCAAGTAAATTAAGATGTAAAAATACAAATTGAAGGATGAATCAGATCAACTTTAAATTTCAAATCAGTCAATCACCACCTTCACTGGTACTCCAAGTATAATAAAAAAAGAAAGAAGATGGGTAAGAAAGGAAACTGTAATCTGTGTAGCATACCAGAAATAATGGCGTTCCAAGATATGACATCCTTGGCACGAATCCCATCAAACAGCCTTCTGGCGTTCTGCAAATCGCCCTCCTTGCAATACCCTGTGATCATCGCAGTGCATGCCACAACATTCTTCTCTGGCATTGCCTCGAACAATTTTCTTGCCTCTTCCAACATGTTGTTGTCGACATACCCACTTATCATTGCAGCCCACGAAACCAAGTTCCTTGTAGGCATTGCGTCAAACAGCTCTCGCGCGCTAGCGACCTCCCCGCACCTCGCGAGCCCATCCACCATGGTGGTGTACGACACCACGTTCCTCTCGGGCATTTGGTCGAACAGCGACCGCGCGTCCTCCATGCTGCCGAGCCGGACGAGGCCGGCGAGCATGGCGTTCCACGAGGCGACGTTGCGGCGCGGGGCGCGCGCGAAGTAGGCGGAGGCGGCCGCGAGGTCGCCGTGCGCGAGGCATCCGGCGATGATGGAGTTCCAGGAGATGACGTTGCGGGAGGGCATATCGTCGAAGAGGCTGCGCGCGGCGGGCAGGTCGCGGCCCGCCCGCCACAGCGCGGTCAGGAGCGCGTTCCAGGAGACGGCGTCGCGGCGGGGCATGGCGTCGAACACCCTGCGCGCGGCGGCCACGTCGCCGGCGCGGGCGAGCGCGGTGATGCGCTGGTTGTCGCGGACGAGGAGGCGGGAGGAGGCGAGGGCGGCATGGTGACGCAGTCGATGCATTGCGAAGTAAACACGCAGTGGATACTCAAGTCGGAATAGTTCAACTCGAAAAGGGCTCAAAACGATGGGTTTTCGTGATTAGATGGAGTAAAAGTGCAAATGATTCAGCCCGCAATGGTTAAGTAAAAAT More
CDS seq		ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGAATGGATTTTAATCAAACGAGTACAGTGGATGTTGCTTTGA More
Protein seq		MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECEWILIKRVQWMLL
Function		Pentatricopeptide repeat-containing protein At4g02750 [UniProtKB/Swiss-Prot:Q9SY02]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_08G0377800	OsMH63_08T0377800.1	Chr08	25621180	25629356	-	maker
CDS seq	ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGGTTAG More
Protein seq	MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECG More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_08G0377800	OsMH63_08T0377800.2	Chr08	25626636	25629356	-	maker
CDS seq	ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGAATGGATTTTAATCAAACGAGTACAGTGGATGTTGCTTTGA More
Protein seq	MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECEWILIKRVQWMLL More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_08G0377800	OsMH63_08T0377800.3	Chr08	25626649	25629356	-	maker
CDS seq	ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGGTTAG More
Protein seq	MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECG More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_08G0377800	OsMH63_08T0377800.4	Chr08	25626684	25629356	-	maker
CDS seq	ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGGTTAG More
Protein seq	MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECG More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.5639395	1.758127	0.244236

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_08g0481000	RBH	0.257407	0.174815	1.741666
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os08g37520	RBH	0.174072	0.117578	0.179926
Nipponbare \| IRGSP 1.0 \| RAP-db	Os08g0481000	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_08g0019700	RBH	0.064756	0.000000	0.216897
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_08g0019620	RBH	0.000000	0.000000	0.493139
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_08g0019520	RBH	0.296269	0.000000	0.000000
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_08g0019720	RBH	0.000000	0.060190	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_08g0019590	RBH	0.000000	1.214598	0.000000
Minghui 63 \| MH63RS3 \| HZAU	NA	NA	NA	NA	NA
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_08g0019520	RBH	0.000000	0.0	0.0
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_08G0397600	RBH	0.3253415	1.779148	2.8340015
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_08g0018820	RBH	0.029140	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_08g0019090	RBH	0.000000	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_08g0018930	RBH	0.0	2.220984	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_08g0019770	RBH	0.000000	0.209474	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_08g0019150	RBH	0.000000	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_08G019330	RBH	0.084543	0.0	0.000000
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_08g0019460	RBH	0.000000	5.258762	0.552174

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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