Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_08g0019720 | OGI:08068460 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr08:24736236-24744031 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAGAGGCAGGTAGTCAATATATGATGATGATATATACAAGGAAACATACCTAGAGGAACTGGCGTCTTTGGCTGACTGCTGGGGCCAGCTGATGTCGATGGTCAGGACAGAGAAGCACAACTCAACTGGACAACAGTCCTAATAATTAATAAATAAACAAATGGGTACATCTAAAATTCTGAAGAAAACAAACTTGGACCGCTTCTGTGCTTTTCTGCTTACCCTTCAAGGCGGCTCTCGAGGTTTGGACGGTTTCAATTCCTTGCCTTCTTCAATAAGCCTTTTCATCTTCTCCTTCCTCTGGCAACGCGAAAGACGCGGTATGATCTCTACTTCTATACCCAGGAGCAACCGTAGCCTCCGGTATGCGGACACCACCATTTCAGAGTAACACCGTATTCTCTGTTTCTCTATCTTACTGATAGAATTTTGGGTTTCATAGTATACGACTTTGGAGGAACGCAGGTGGCATGGTCGGCTAATTCTGGGCTGGCTGCAGGGTTCTTGAATGGACAAGATGTTCTCCTTCAGGTCCAGGTAGAGTAATTGTCTATTCCCAACTTTTCTTTTTCAAGTTCTGGAATCATTTTGTGAGTTTTTGACATCTCGGTTTTCATTGAGTGGAATTTCTGTTTAATTCCTTGTTTTTAGATTTACTGTTTTGATGATTTCCACCAATCCATGAATCAACATGAACAATGTTTTTGTTGACAGCGTCAGATCAACTTCCAATGGTGACAAAGCCTCCAATTCAATCACCGAGGCATCAGAGATGCAGGAGAAATTGAACAAGCTGCAGGAAGAGCTGAAGAATGAGAAAAAGGAGAAGGCGCGTGCTCTGGATGAGATAGCAGGGCTCAAGAAGAAAAAGAATGAGAATAAGGTGACAAGCAATGGAGGTGATGATAAGTTGGACCTTGTGCACAGATTAGAGCAGTTAGAAGGTGAACAGGAGGCAGCAAGGGATTCAGAGAAGAAACTGCTAGTGTCATTGGGGGCCCAAACGAAGCAGCTTGAACAAACCAAGGTATCTCTGGAGGAGGCCAAGCTTGAGATTGCTTCCCTCAAAGATAATAAAAAGAGCTCGGAAGCCTTCAGTGCACTGTCTTCTAATCCTAGCCAACCGGCTAGGAATCTCAGGAGAAGGGGAATAATGTCTTTCTCCTTTGCTGATCCTGGTGAGGTAGAGACGTGGTCATTACAGCGTGAACTCAAGTTGGCTGTCGAAGCTGAGGAGAAGTGCAAGAAGGCCATGGATGATTTGGCAATAGCTTTGAAGGAACAGACAACTGATGCCAGAGATGCAAAAGCGAAACTTTCATTAGCGCAATCTGAGTTGACTAATGCAAGAACTGAAATGGAGAACTCAAAGGCCTTGCTTAAAAACACAGAGGAGAAGCTCCAGGTAGCACTGGAAGAGGCAGCGCAACTGAAGTTTGAGTCAGATGAGTTAGCAGCAGCCTCAAAAGAGAAAGAGAGGGGACTGGTTGATTGCATCAAGATGTTTGAGGGGGATCTCATCAAAGCAAAGGAGGAGAATAATAAATTGATCGAATCACAAAGGGTGATCAGAGATGAGAATTCCAGGTTGAGAGAAATGTTGAAGCATGCAGTGTGTGAAGCTAATGTAGCAAAAGAATCTTTGGAGATTGCCAGGGCAGAGAATTCTCAGCTTAAAGAAGACATATCTGAGAAAGAGAATACCTTACAGAGCATCATACAAGACTATGAGTCCCTCAAGGTAAGCGAGTCTGCGGCACAAAGTAGTATTGGAGAATTAAAGGATATGATTGATGCTATGTTCAGTTCAGAGTCGACCAAAACCTCAGCAGAAGCATCACCCAGAGATACCAAGGGAAATGAGGTGTATTATGACCACGAAAGAACCCAGTTGGAGGATATCAGGAATCCTGCGCTGCACAAAAAGAGGACAGTTCTCAGAAAATTTGCTGACATAATGAAGAAAAGAAACTCTCAAAGTGCAATCTAACATCCTTAGACAGCAATCAAATACAACTTCAGATTATCTTTTGCTCTTCAAAGTCGTTCACAAGACAGTTGGAATGCTGAGAATTCAATCTGGCAAACTGAAATGATATGCCTTGACTAAACCTTGGCGTTGCATGTGTAAACCTATGAAGCATATGTGTATATAATACAGATGTTGGAATATGAAACCAGCATAGCTTTCAAATTCTCTTGGCTCTTTTTATACATTCTCTGCATTTTGGAATCCACTAGGTGTAAAGTCTTGATGTGGAAATCTTGAATTGTTTTGACTAGTGCAGAAATATTACAATATGCATTTTGAAGTCCTTGTTTTGTGATTCAAGTCTGTCCAAAGTTAAATTTCCAGATAACTGAAACACTTCTATTAATAAAATCGGTCAGATTATTATATTATATTATATTCAACCTACCCTTCTAAGGTACTAATGAATTGCATGTTTCTTTGTTTATGTAGCGTATAAAATCATAATGAACTTGTATTGTTCAAACTTGGAAATGAAATACAAGAGATTTCTCCGAAAATAGCACGCAGCTATTAAAATCTGATTTGTAAATAGCAGACTGGTTGAGTAAAGTTTTTTTCGCCGGGTCGGCCAAGATTCCGACCAATGTATATTAAGCAGACTGGTTGAGTAAAGTTGCTACATAACATAGCACTTTATCTCGGCCCCTCTAATTTTCAATATAAAAGTGACTTTCTCTTTGGGTAAACACAGGTAAGTGCCTAATAATTTATTTTTCCTGATGAAGGTTGTTCATGTATGCTTCATTTTATCTGCCATGAAATCATCCTTCATGGAGTATTGATTTTTTTTTTTTTGGAAAACATAGCTTTCTTTAGAAAAGAGGCCAGTGGCCCAGCTTTTAATTGAAAGCCATCCTTGAAAACGTAACTAACTCCGTTATATTAATATACCAAAGCAGAATGAACAGACTTCTTCCCTTTCTGTCCAACTAGGCCAAAGTAATATTGCAACAAGCAAACACATCCCGTCAAGATATTTATGGGGAACTACAGATAAGCCTGGTAATGGGCTAGCCAACCCATGGGTTGTACGGGTTGAAACACTAATGGGCTGAAAATGGTGTGTCTTGTATGGGTTATAGGAAGGAATAAGGGCAGGGTTGGGTTGGGCCATATAAAATGAGGGTTACGATGGGTTGGACACTGTAGCTCAGAATGGGGTTCAGCCCATGGGCAGTAAAAAAGGGTCTTCTTTGTGGGAGAACCCACAGCGGTAGGAGCTCGGTGACTGGATCGGCGGCCACTGCCCACCGCCGCCTTGCGCCGCATTCTCCCCCTCCGCCTCCGCCTCCTCCTCCCCCTCCCCGTCGCGATCCTCCGTCGCTGTCCCGGTCCCCGTCCGCGAGCGCCGACGCTCTGTCCTTCCCGTCCAGATCACGCCACCCCGTCCGCCGGCGCGTCGTACGCCTCCACCAGCTGTCGGTCCTCCGCCTCCCGGTCAAGATCCGGCACCGCGCCGCCGTCCTCCGTCGCCTCCGCCTCCTGTTCGAGATCCACAGCACCGCGCAACCCTTTCTCTGCAAGTCGGTTTCTGCAACCAAGGTTTGTTTTCTTTGCTACAGGCATTGCTATTTTTGTTCTTGGTTTCGGTGCAGCGGATTAGATTGCTCTGCTAACATCTGAATGAAGCAAATCTTGATCACATGTTGAAATTGTTAATCCAGCTAGGGATTGCTTGTTAGTTTGCCGATTCACAGTACAAACTTGTAAAAAGCTATTAGGATTAGATTAGACATTGAATATAATGTATAAGCTTGTATAGAGAGATCATAGGATTCTCTTAAATAAGAAGTATATGCAGAGGAACGAATATTGTTTCAAGGCATTGTTATTCTTGCTAGTCCCTCTTTGTGTCAAAAGCCTTCTTTGCCACTTTCAGTTGTACTACTGACACTGAAATGATTTTTTTAACGAATATCATGTTTTAGATTATTAGTTCTTTGTGATGATTATTCCGAGAAGTTAACTGTAACTCATATTGAATTTTAGGAATCTGTAATAGAGAAAATTCTGGGCATATAATGATTTGTACTTCTGCAACTTGTAATACATTAAGTTGTATATATCTTGGATTTTAAATAAACACACATATATAATCTGAAACTGTGTTGGTCGAACTAGCTGCTCTTCTGTTTGAGATTAACTGAAAGTTGGTAATTTAATTTATACTGTAATAAAACTTACTTGATGTCAACTAGTATAAATTTTCAATTTGTTTCTAAGTAATATACTTAGAGTTACATATCTATTCAGATGTAGCTTGATCTGCACTATATATTTATTGTTGCACCGGATTGTTCTGTCCTCAACATAGACCTAAACTGGTGATAAATGTTTTTAACCCCTGTGTTCAACTTGATTTTGCAACTTCTAATTCTGTTTGTAACTTGATAGACTATGAATTGGTGAATGATTAAGCAACTGGAAGGAGTAAAGCAATTCTGAATTTCCATTGCTTAAGTATAGGAACATGGATTATTGTACTGATGCCTCCTTCAATAGGTTCTAACTTCTAACCTCATTTTGTTTCTACAGGGAGATGGAAACATTGCACTGGACAAGCTGTGGCATAAGAGGAAGGCTGAGATTAAGCATCAATAGATCTTGCTAGTACTTTTGAATGAAAAAATTCTGATATGATTCATAGATGTTTATTAGTTTCAAGGCGTGCCTATTTGTGGCCTAATTTTGCTAAACTATTGTGTATGTCTTAAGAAAGTTCAGTCATATACTTAAACCTGGCTTAGTTTGTGGTAATCTCTATTTAACTTATCTGAAAATTATTTGTCTTACTCCCTATAGCTGTGCTATGCATGTATACAAAGCTTCATTTTCATGTATGTGCGAAGGCTCTACAGTTGTTGTATGGTTGACGTGCTGTCGTGCTGAGCCCAATGGGTTAGTCTCTTCATTGTTTATGGGTTGTCCAAGGGTTCACAAAGGGTTAGGGTTCAACAAGCACTGAGAAGGTTACAGGTTGGGGTTGGTCTGGGCTAAATATGCATGTTAGTGGGTTAGGGTGGGGTTTGGGTGCAATATATAAATAGAAATGGGCAGGGGTGGGGTTCGGGGTGGGCCACGACCCATTACCAGGCCTAACTACAGATTGATTATGTGGAACACCAACTTCGATCTGTATGAAACACGATAGCACTTTCCTTTGGGTCAATTGACCTGAAATCATCAGTTTTAGCCAACTGGCTGCAAAGCCTGTAAAGTCCTAAGTTAGGATCAATAAATGTAGCTGTTACCTCCAAAATATGCTCCTTCTCATGTCTAGTTTCAACCCTCCTTTTGCAAAGAGATATATCTTTGTCATCAAAGCAACATCCACTGTACTCGTTTGATTAAAATCCATTCTGGGAATTCATGTATCTCATATGAATAATCTATTCATAGAAATTTGATCCTAGAGCACAAAGCTGGAGATTCTGAGTACAGCAGAGCTTACTAAACTCGCACGAGAATTTGGATGATATAAAAAGCACTAACCACATTCTTGAACTAGCTCTTCCATCATCTGAGTTTTATCAGTGACCATCTGCATATGAAAGCTAATTTTTCTCAGCTCGGATAAGATCATGTCCATCTCAGGATGGGATGCATCACCACCAACAAACATATGAACTTTATCAGCAATCTCTGTCCAGCTATGTCCAGGTTGCTTCTTCACACCTTTTTCCTTCATTTGGCTCCTTACTCGATTGACTTCACCCCACATGCCAGCAGCAGCATATATGTTTGAAAGCATCACATAAGCCCCTGAACTTTCAAAGTCTGATAGGACAAGCATCTTAGCAGCAAGTTCACCCAACTGAACATTACCATGTGTCTGAGAAGCACAAAGTAGAGTGCCCCAAACATTCTTCTCAGCCTCAGAAGGCATTTCCTTTATGTAACTACATGCTTTCTCCAACTGTCCTGCTCGGCTCAATATATCCACAATACAAGCATAGTGTTCTGCTCTTGGAGATATTGCATATTTGGAAAACATAAGATCAAACAGTTTCAAGCTTTCATCCACTCTGCCAGCATGTCCACACGCTGATAACATGCTAAGGAAGGTAATATCATTCGGTATCAGTCCACACAGTTCCATCTCATGGAACAGAGCAATAACTTTCTGATATCTGCCATGTTGTGCATATGCGGCAATTATTGTGTTCCAAGAAACAATATCCTGGCTTTTGAGACTCATGAAGACTAACTCAGACTCGTCAACATTGCCACACTTGCTATACATTGTCATCAAAGCATTACAAATAGAAATGCTTGATTCTAACATAGCTTTGATGACAACAGCATGTGTTGATCTTCCTTGTCTGAGCAGAGCAAGAGAAGAACATGCTGTCAGTAGTGCAATAAGTGTTGCCTGATCTGGTTTGATACCTTCTCTAAGCATTATGATGTACAGTTTCGTTGCTTCTTCTCCAAGTCCATTATGAACATATCCTGCAGAAACATGGAAAGGCTAACTGCGAGAATTTTCAATGCAAAGATCTGCTTATTTATTGCATTATATTTGTTATAAAATCCCCTACCCATCCCTACCCCATTTTCTCGAACAGAAACTGAGATACAAGGGTTACAGTTACAGACGAGTTGAAGCTTGAAACACTATAATCCAATGAAACAAACCTTGCAATGTTCAACAGCTGACATGCCCACCTCACCGTACAATTTTGTACACTAGAGCCGAGCTTTTTTTTATCAGCGTAAAGGACCAAACTATTACCTTCTAGAGAAACCATATTTGTATGTTGGCCTGTGATGAGCAGGTTAAAGGGGATGAACTGAACTATTGAATAGCTCCTGGAAATTGGAAAAAACCAGAACCTGGATAGTTTTCTGAACCTTTACTAAAATGGCAGTCAAGTAAATTAAGATGTAAAAATACAAATTGAAGGATGAATCAGATCAACTTTAAATTTCAAATCAGTCAATCACCACCTTCACTGGTACTCCAAGTATAATAAAAAAAGAAAGAAGATGGGTAAGAAAGGAAACTGTAATCTGTGTAGCATACCAGAAATAATGGCGTTCCAAGATATGACATCCTTGGCACGAATCCCATCAAACAGCCTTCTGGCGTTCTGCAAATCGCCCTCCTTGCAATACCCTGTGATCATCGCAGTGCATGCCACAACATTCTTCTCTGGCATTGCCTCGAACAATTTTCTTGCCTCTTCCAACATGTTGTTGTCGACATACCCACTTATCATTGCAGCCCACGAAACCAAGTTCCTTGTAGGCATTGCGTCAAACAGCTCTCGCGCGCTAGCGACCTCCCCGCACCTCGCGAGCCCATCCACCATGGTGGTGTACGACACCACGTTCCTCTCGGGCATTTGGTCGAACAGCGACCGCGCGTCCTCCATGCTGCCGAGCCGGACGAGGCCGGCGAGCATGGCGTTCCACGAGGCGACGTTGCGGCGCGGGGCGCGCGCGAAGTAGGCGGAGGCGGCCGCGAGGTCGCCGTGCGCGAGGCATCCGGCGATGATGGAGTTCCAGGAGATGACGTTGCGGGAGGGCATATCGTCGAAGAGGCTGCGCGCGGCGGGCAGGTCGCGGCCCGCCCGCCACAGCGCGGTCAGGAGCGCGTTCCAGGAGACGGCGTCGCGGCGGGGCATGGCGTCGAACACCCTGCGCGCGGCGGCCACGTCGCCGGCGCGGGCGAGCGCGGTGATGCGCTGGTTGTCGCGGACGAGGAGGCGGGAGGAGGCGAGGGCGGCATGGTGACGCAGTCGATGCATTGCGAAGT
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| CDS seq | ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGGTTAG
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| Protein seq | MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECG |
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| Function | Pentatricopeptide repeat-containing protein At4g02750 [UniProtKB/Swiss-Prot:Q9SY02] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_08g0019720 | OsARC_08g0019720.02 | Chr08 | 24741498 | 24744031 | - | NAM | ||
| CDS seq | ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGGTTAG
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| Protein seq | MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_08g0019720 | OsARC_08g0019720.01 | Chr08 | 24736236 | 24744031 | - | NAM | ||
| CDS seq | ATGCATCGACTGCGTCACCATGCCGCCCTCGCCTCCTCCCGCCTCCTCGTCCGCGACAACCAGCGCATCACCGCGCTCGCCCGCGCCGGCGACGTGGCCGCCGCGCGCAGGGTGTTCGACGCCATGCCCCGCCGCGACGCCGTCTCCTGGAACGCGCTCCTGACCGCGCTGTGGCGGGCGGGCCGCGACCTGCCCGCCGCGCGCAGCCTCTTCGACGATATGCCCTCCCGCAACGTCATCTCCTGGAACTCCATCATCGCCGGATGCCTCGCGCACGGCGACCTCGCGGCCGCCTCCGCCTACTTCGCGCGCGCCCCGCGCCGCAACGTCGCCTCGTGGAACGCCATGCTCGCCGGCCTCGTCCGGCTCGGCAGCATGGAGGACGCGCGGTCGCTGTTCGACCAAATGCCCGAGAGGAACGTGGTGTCGTACACCACCATGGTGGATGGGCTCGCGAGGTGCGGGGAGGTCGCTAGCGCGCGAGAGCTGTTTGACGCAATGCCTACAAGGAACTTGGTTTCGTGGGCTGCAATGATAAGTGGGTATGTCGACAACAACATGTTGGAAGAGGCAAGAAAATTGTTCGAGGCAATGCCAGAGAAGAATGTTGTGGCATGCACTGCGATGATCACAGGGTATTGCAAGGAGGGCGATTTGCAGAACGCCAGAAGGCTGTTTGATGGGATTCGTGCCAAGGATGTCATATCTTGGAACGCCATTATTTCTGGATATGTTCATAATGGACTTGGAGAAGAAGCAACGAAACTGTACATCATAATGCTTAGAGAAGGTATCAAACCAGATCAGGCAACACTTATTGCACTACTGACAGCATGTTCTTCTCTTGCTCTGCTCAGACAAGGAAGATCAACACATGCTGTTGTCATCAAAGCTATGTTAGAATCAAGCATTTCTATTTGTAATGCTTTGATGACAATGTATAGCAAGTGTGGCAATGTTGACGAGTCTGAGTTAGTCTTCATGAGTCTCAAAAGCCAGGATATTGTTTCTTGGAACACAATAATTGCCGCATATGCACAACATGGCAGATATCAGAAAGTTATTGCTCTGTTCCATGAGATGGAACTGTGTGGACTGATACCGAATGATATTACCTTCCTTAGCATGTTATCAGCGTGTGGACATGCTGGCAGAGTGGATGAAAGCTTGAAACTGTTTGATCTTATGTTTTCCAAATATGCAATATCTCCAAGAGCAGAACACTATGCTTGTATTGTGGATATATTGAGCCGAGCAGGACAGTTGGAGAAAGCATGTAGTTACATAAAGGAAATGCCTTCTGAGGCTGAGAAGAATGTTTGGGGCACTCTACTTTGTGCTTCTCAGACACATGGTAATGTTCAGTTGGGTGAACTTGCTGCTAAGATGCTTGTCCTATCAGACTTTGAAAGTTCAGGGGCTTATGTGATGCTTTCAAACATATATGCTGCTGCTGGCATGTGGGGTGAAGTCAATCGAGTAAGGAGCCAAATGAAGGAAAAAGGTGTGAAGAAGCAACCTGGACATAGCTGGACAGAGATTGCTGATAAAGTTCATATGTTTGTTGGTGGTGATGCATCCCATCCTGAGATGGACATGATCTTATCCGAGCTGAGAAAAATTAGCTTTCATATGCAGATGGTCACTGATAAAACTCAGATGATGGAAGAGCTAGTTCAAGAATGTGGTTAG
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| Protein seq | MHRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQMVTDKTQMMEELVQECG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.060190 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0481000 | RBH | 0.257407 | 0.174815 | 1.741666 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g37520 | RBH | 0.174072 | 0.117578 | 0.179926 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0481000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0019700 | RBH | 0.064756 | 0.000000 | 0.216897 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0019620 | RBH | 0.000000 | 0.000000 | 0.493139 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0019520 | RBH | 0.296269 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013880 | RBH | 0.319489 | 0.153608 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0019590 | RBH | 0.000000 | 1.214598 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0377800 | RBH | 0.5639395 | 1.758127 | 0.244236 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0019520 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0397600 | RBH | 0.3253415 | 1.779148 | 2.8340015 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0018820 | RBH | 0.029140 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0019090 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0018930 | RBH | 0.0 | 2.220984 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0019770 | RBH | 0.000000 | 0.209474 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0019150 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G019330 | RBH | 0.084543 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0019460 | RBH | 0.000000 | 5.258762 | 0.552174 |
