Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0043800 | OGI:08007530 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:2895814-2896822 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGGAAAGTTCAGGCATGTACTCCTCCCGCTCCGCCTACCAAGCATTGTTCCTCGGTTGAATCCCGTTCCAATCCACGCCGATCTGGAAATCGCTGGCGCCGCTGCGCTGCCGTTACTTCAGTTGGTTGGTCGCACTCAACCGCTGCTGGACGGCGGACAGGTTAAGCATCAGGGGCTTGCCCCACCCCAGCATGTGTGTCCTATGCGATCAGCACGAGGAAAACATCAACCACATTTTGGTCGCATGCCCAGAACCCGTCAATGAAACCTCATTCCACTCTTGGTTGTGTGACAAGAGGGAAACCTTACCGAGCTCTCAACGGCGAGGTTTCGATACCATTGCTACTCTCGCAGCATGGACTATCTGGAAGGAGCGAAATAACAGGGTGTTCAACCAGAAGCACATAAGCTGGACAGAAGTGGCAAGGGCAATGGCGGAAGAGGCAGCGTTGTGACGGCTCGCCAATACTGCCATACCGGCCACGCCTTTAGAGCGCTCAGGTCGCAACATTGTATCGCAAGAATAGGGTTTAATGCTCTTGGGTGACTTCCTGTAATCCCGTCTCCTGCTGTATTTTCCCTTTCACCTGTACAGACTTTTACTCCTCTTAATACAAAGATGCGCTCCTTGCGTATTCCCGAAAAAAAAAAGTGGAGTCTTATAGGAGAAGTGTGGGTGGAGATGCTCTGCTTCGCTGGTAGATGCCAAGGATACTTGCATGCCAAGAGCCTTGGATCAGGCGTTGATATTGTGGCTCCTGTTGGCACATGCAGGAATGGAGGCATTCCCTGAGAGGCTTCAGAGGAGACAACAGTGCCGCTTGCTGAAAAGGAAGCCTCGGGAGAACAGACAAGATGGTGGCACTAGTCCTTCAAATTCCCGAGATTTCAAGCCTCTCAATATCGATGAAGAAGATGCAGCTACTCCATCTGGAACTTCCCTAGGCACAGAGTCTTGTAGAGCAGGTACAATAGCAGGCTATAAGTCAACTGCAAACATATTTTAA
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| CDS seq | ATGGGAAAGTTCAGGCATGTACTCCTCCCGCTCCGCCTACCAAGCATTGTTCCTCGGTTGAATCCCGTTCCAATCCACGCCGATCTGGAAATCGCTGGCGCCGCTGCGCTGCCGTTACTTCAGTTGGTTGGTCGCACTCAACCGCTGCTGGACGGCGGACAGAACCCGTCAATGAAACCTCATTCCACTCTTGGTTGTGTGACAAGAGGGAAACCTTACCGAGCTCTCAACGGCGAGGGTGTTCAACCAGAAGCACATAAGCTGGACAGAAGTGGCAAGGGCAATGGCGGAAGAGGCAGCGTTGTGACGGCTCGCCAATACTGCCATACCGGCCACGCCTTTAGAGCGCTCAGGTCGCAACATTATGCCAAGGATACTTGCATGCCAAGAGCCTTGGATCAGGCGTTGATATTGTGGCTCCTGTTGGCACATGCAGGAATGGAGGCATTCCCTGAGAGGCTTCAGAGGAGACAACAGTGCCGCTTGCTGAAAAGGAAGCCTCGGGAGAACAGACAAGATGGTGGCACTAGTCCTTCAAATTCCCGAGATTTCAAGCCTCTCAATATCGATGAAGAAGATGCAGCTACTCCATCTGGAACTTCCCTAGGCACAGAGTCTTGTAGAGCAGGTACAATAGCAGGCTATAAGTCAACTGCAAACATATTTTAA
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| Protein seq | MGKFRHVLLPLRLPSIVPRLNPVPIHADLEIAGAAALPLLQLVGRTQPLLDGGQNPSMKPHSTLGCVTRGKPYRALNGEGVQPEAHKLDRSGKGNGGRGSVVTARQYCHTGHAFRALRSQHYAKDTCMPRALDQALILWLLLAHAGMEAFPERLQRRQQCRLLKRKPRENRQDGGTSPSNSRDFKPLNIDEEDAATPSGTSLGTESCRAGTIAGYKSTANIF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0043800 | OsMH63_08T0043800.1 | Chr08 | 2895814 | 2896822 | + | maker | ||
| CDS seq | ATGGGAAAGTTCAGGCATGTACTCCTCCCGCTCCGCCTACCAAGCATTGTTCCTCGGTTGAATCCCGTTCCAATCCACGCCGATCTGGAAATCGCTGGCGCCGCTGCGCTGCCGTTACTTCAGTTGGTTGGTCGCACTCAACCGCTGCTGGACGGCGGACAGAACCCGTCAATGAAACCTCATTCCACTCTTGGTTGTGTGACAAGAGGGAAACCTTACCGAGCTCTCAACGGCGAGGGTGTTCAACCAGAAGCACATAAGCTGGACAGAAGTGGCAAGGGCAATGGCGGAAGAGGCAGCGTTGTGACGGCTCGCCAATACTGCCATACCGGCCACGCCTTTAGAGCGCTCAGGTCGCAACATTATGCCAAGGATACTTGCATGCCAAGAGCCTTGGATCAGGCGTTGATATTGTGGCTCCTGTTGGCACATGCAGGAATGGAGGCATTCCCTGAGAGGCTTCAGAGGAGACAACAGTGCCGCTTGCTGAAAAGGAAGCCTCGGGAGAACAGACAAGATGGTGGCACTAGTCCTTCAAATTCCCGAGATTTCAAGCCTCTCAATATCGATGAAGAAGATGCAGCTACTCCATCTGGAACTTCCCTAGGCACAGAGTCTTGTAGAGCAGGTACAATAGCAGGCTATAAGTCAACTGCAAACATATTTTAA
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| Protein seq | MGKFRHVLLPLRLPSIVPRLNPVPIHADLEIAGAAALPLLQLVGRTQPLLDGGQNPSMKPHSTLGCVTRGKPYRALNGEGVQPEAHKLDRSGKGNGGRGSVVTARQYCHTGHAFRALRSQHYAKDTCMPRALDQALILWLLLAHAGMEAFPERLQRRQQCRLLKRKPRENRQDGGTSPSNSRDFKPLNIDEEDAATPSGTSLGTESCRAGTIAGYKSTANIF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.02867 | 0.010387 | 0.0112325 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0149850 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g05410 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0149850 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0003330 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0003380 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0003350 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0003330 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0003160 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0043600 | RBH | 2.201976 | 2.432149 | 5.8830485 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0003020 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0047300 | SBH | 0.5520785 | 1.2758485 | 1.702821 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0002940 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0002980 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0002900 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0003170 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0003090 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G003030 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0002910 | SBH | 0.0 | 0.0 | 0.0 |
